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1.
J Med Chem ; 62(17): 7941-7960, 2019 09 12.
Article in English | MEDLINE | ID: mdl-31403780

ABSTRACT

A series of substituted 4,6-dihydrospiro[[1,2,3]triazolo[4,5-b]pyridine-7,3'-indoline]-2',5(3H)-dione analogues were synthesized and evaluated as potent dengue virus inhibitors. Throughout a structure-activity relationship exploration on the amide of the indolone moiety, a wide range of substitutions were found to be well tolerated for chemical optimization at this position. Among these compounds, 15 (JMX0254) displayed the most potent and broad inhibitory activities, effective against DENV-1 to -3 with EC50 values of 0.78, 0.16, and 0.035 µM, respectively, while compounds 16, 21, 27-29, 47, and 70 exhibited relatively moderate to high activities with low micromolar to nanomolar potency against all four serotypes. The biotinylated compound 73 enriched NS4B protein from cell lysates in pull-down studies, and the findings together with the mutation investigations further validated dengue NS4B protein as the target of this class of compounds. More importantly, compound 15 exhibited good in vivo pharmacokinetic properties and efficacy in the A129 mouse model, indicating its therapeutic potential against the dengue virus infection as a drug candidate for further preclinical development.


Subject(s)
Antiviral Agents/pharmacology , Dengue Virus/drug effects , Dengue/drug therapy , Drug Design , Viral Nonstructural Proteins/antagonists & inhibitors , Animals , Antiviral Agents/chemical synthesis , Antiviral Agents/chemistry , Cell Line, Tumor , Cell Survival/drug effects , Dengue/metabolism , Dengue Virus/enzymology , Dose-Response Relationship, Drug , Humans , Indoles/chemical synthesis , Indoles/chemistry , Indoles/pharmacology , Male , Microbial Sensitivity Tests , Molecular Structure , Pyridines/chemical synthesis , Pyridines/chemistry , Pyridines/pharmacology , Rats , Rats, Sprague-Dawley , Spiro Compounds/chemical synthesis , Spiro Compounds/chemistry , Spiro Compounds/pharmacology , Structure-Activity Relationship , Tissue Distribution , Triazoles/chemical synthesis , Triazoles/chemistry , Triazoles/pharmacology , Viral Nonstructural Proteins/metabolism
2.
Environ Sci Technol ; 44(5): 1813-9, 2010 Mar 01.
Article in English | MEDLINE | ID: mdl-20085253

ABSTRACT

Algae are an attractive source of biomass energy since they do not compete with food crops and have higher energy yields per area than terrestrial crops. In spite of these advantages, algae cultivation has not yet been compared with conventional crops from a life cycle perspective. In this work, the impacts associated with algae production were determined using a stochastic life cycle model and compared with switchgrass, canola, and corn farming. The results indicate that these conventional crops have lower environmental impacts than algae in energy use, greenhouse gas emissions, and water regardless of cultivation location. Only in total land use and eutrophication potential do algae perform favorably. The large environmental footprint of algae cultivation is driven predominantly by upstream impacts, such as the demand for CO(2) and fertilizer. To reduce these impacts, flue gas and, to a greater extent, wastewater could be used to offset most of the environmental burdens associated with algae. To demonstrate the benefits of algae production coupled with wastewater treatment, the model was expanded to include three different municipal wastewater effluents as sources of nitrogen and phosphorus. Each provided a significant reduction in the burdens of algae cultivation, and the use of source-separated urine was found to make algae more environmentally beneficial than the terrestrial crops.


Subject(s)
Crops, Agricultural/growth & development , Eukaryota/growth & development , Agriculture/methods , Animals , Energy Metabolism , Environment , Fatty Acids, Monounsaturated/analysis , Gases/analysis , Greenhouse Effect , Life Cycle Stages/physiology , Poaceae/growth & development , Rapeseed Oil , Virginia , Zea mays/growth & development
3.
J Biol Chem ; 280(5): 3740-6, 2005 Feb 04.
Article in English | MEDLINE | ID: mdl-15539389

ABSTRACT

Pollen from cedar and cypress trees is a major cause of seasonal hypersensitivity in humans in several regions of the Northern Hemisphere. We report the first crystal structure of a cedar allergen, Jun a 1, from the pollen of the mountain cedar Juniperus ashei (Cupressaceae). The core of the structure consists primarily of a parallel beta-helix, which is nearly identical to that found in the pectin/pectate lyases from several plant pathogenic microorganisms. Four IgE epitopes mapped to the surface of the protein are accessible to the solvent. The conserved vWiDH sequence is covered by the first 30 residues of the N terminus. The potential reactive arginine, analogous to the pectin/pectate lyase reaction site, is accessible to the solvent, but the substrate binding groove is blocked by a histidine-aspartate salt bridge, a glutamine, and an alpha-helix, all of which are unique to Jun a 1. These observations suggest that steric hindrance in Jun a 1 precludes enzyme activity. The overall results suggest that it is the structure of Jun a 1 that makes it a potent allergen.


Subject(s)
Allergens/chemistry , Juniperus/chemistry , Plant Proteins/chemistry , Pollen/chemistry , Antigens, Plant , Crystallography , Epitopes/chemistry , Protein Structure, Quaternary , Protein Structure, Secondary , Protein Structure, Tertiary
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