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Biomolecules ; 10(2)2020 01 27.
Article in English | MEDLINE | ID: mdl-32012780

ABSTRACT

In the present work, we performed a complementary quantum mechanical (QM) study to describe the mechanism by which deprotonated pralidoxime (2-PAM) could reactivate human (Homo sapiens sapiens) acetylcholinesterase (HssAChE) inhibited by the nerve agent VX. Such a reaction is proposed to occur in subsequent addition-elimination steps, starting with a nucleophile bimolecular substitution (SN2) mechanism through the formation of a trigonal bipyramidal transition state (TS). A near attack conformation (NAC), obtained in a former study using molecular mechanics (MM) calculations, was taken as a starting point for this project, where we described the possible formation of the TS. Together, this combined QM/MM study on AChE reactivation shows the feasibility of the reactivation occurring via attack of the deprotonated form of 2-PAM against the Ser203-VX adduct of HssAChE.


Subject(s)
Acetylcholinesterase/drug effects , Organothiophosphorus Compounds/pharmacology , Pralidoxime Compounds/pharmacology , Acetylcholinesterase/chemistry , Catalytic Domain , Humans , Molecular Conformation , Molecular Dynamics Simulation , Pralidoxime Compounds/chemistry , Protons , Quantum Theory , Serine/chemistry
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