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1.
Microbiol Spectr ; 10(1): e0012722, 2022 02 23.
Article in English | MEDLINE | ID: mdl-35196787

ABSTRACT

The emergence of antifungal resistance, especially to the most widely used azole class of ergosterol biosynthesis inhibitors, makes fungal infections difficult to treat in clinics and agriculture. When exposed to azoles, fungi can make adaptive responses to alleviate azole toxicity and produce azole tolerance. However, except for azole efflux pumps and ergosterol biosynthesis genes, the role of most azole responsive genes in azole resistance is unknown. In this study, STK-17, whose transcription is upregulated by azoles, was characterized as a novel kinase that is required for azole resistance. Deletion or dysfunction of STK-17 led to azole hypersensitivity in Neurospora crassa and to other ergosterol biosynthesis inhibitors such as amorolfine, terbinafine, and amphotericin B, but not fatty acid and ceramide biosynthesis inhibitors. STK-17 was also required for oxidative stress resistance, but this was not connected to azole resistance. RNA-seq results showed that stk-17 deletion affected the basal expression and the response to ketoconazole of some membrane protein genes, indicating functional association of STK-17 with the membrane. Notably, deletion of stk-17 affected the normal response to azoles of erg genes, including the azole target-encoding gene erg11, and erg2, erg6, and erg24, and led to abnormal accumulation of sterols in the presence of azoles. HPLC-MS/MS analysis revealed increased intracellular azole accumulation in the stk-17 mutant, possibly due to enhanced azole influx and reduced azole efflux that was independent of the major efflux pump CDR4. Importantly, STK-17 was widely distributed and functionally conserved among fungi, thus providing a potential antifungal target. IMPORTANCE Antifungal resistance is increasing worldwide, especially to the most widely used azole class of ergosterol biosynthesis inhibitors, making control of fungal infections more challenging. A lot of effort has been expended in elucidating the mechanism of azole resistance and revealing potential antifungal targets. In this study, by analyzing azole-responsive genes in Neurospora crassa, we discovered STK-17, a novel kinase, that is required for azole resistance in several types of fungi. It has a role in regulating membrane homeostasis, responses to azole by ergosterol biosynthesis genes and azole accumulation, thus, deepening our understanding on the mechanism of azole stress response. Additionally, STK-17 is conserved among fungi and plays important roles in fungal development and stress resistance. Kinase inhibitors are broadly used for treating diseases, and our study pinpoints a potential drug target for antifungal development.


Subject(s)
Antifungal Agents/metabolism , Azoles/metabolism , Cell Membrane/metabolism , Fungal Proteins/metabolism , Neurospora crassa/enzymology , Protein Kinases/metabolism , Antifungal Agents/pharmacology , Azoles/pharmacology , Cell Membrane/drug effects , Cell Membrane/genetics , Drug Resistance, Fungal , Ergosterol/biosynthesis , Fungal Proteins/genetics , Gene Expression Regulation, Fungal , Homeostasis , Microbial Sensitivity Tests , Neurospora crassa/drug effects , Neurospora crassa/genetics , Neurospora crassa/metabolism , Protein Kinases/genetics
2.
PLoS One ; 16(6): e0253188, 2021.
Article in English | MEDLINE | ID: mdl-34170906

ABSTRACT

ABCC multidrug resistance-associated proteins (ABCCs/MRPs), a subfamily of ABC transporters, are involved in multiple physiological processes. Although these proteins have been characterized in some plants, limited efforts have been made to address their possible roles in Rehmannia glutinosa, a medicinal plant. Here, we scanned R. glutinosa transcriptome sequences and identified 18 RgABCC genes by in silico analysis. Sequence alignment revealed that the RgABCCs were closely phylogenetically related and highly conserved with other plant ABCCs/MRPs. Subcellular localization revealed that most of the RgABCCs were deposited in vacuoles and a few in plasma membranes. Tissue-specific expression of the RgABCCs indicated significant specific accumulation patterns, implicating their roles in the respective tissues. Differential temporal expression patterns of the RgABCCs exhibited their potential roles during root development. Various abiotic stress and hormone treatment experiments indicated that some RgABCCs could be transcriptionally regulated in roots. Furthermore, the transcription of several RgABCCs in roots was strongly activated by cadmium (Cd), suggesting possible roles under heavy metal stresses. Functional analysis of RgABCC1 heterologous expression revealed that it may increase the tolerance to Cd in yeast, implying its Cd transport activity. Our study provides a detailed inventory and molecular characterization of the RgABCCs and valuable information for exploring their functions in R. glutinosa.


Subject(s)
ATP-Binding Cassette Transporters/antagonists & inhibitors , Gene Expression Profiling , Gene Expression Regulation, Plant , Plant Proteins/biosynthesis , Plant Roots/metabolism , Rehmannia/metabolism , Transcriptome , ATP-Binding Cassette Transporters/genetics , Cell Membrane/genetics , Cell Membrane/metabolism , Plant Proteins/genetics , Plant Roots/genetics , Rehmannia/genetics , Stress, Physiological/physiology , Vacuoles/genetics , Vacuoles/metabolism
3.
Int J Mol Sci ; 22(5)2021 Mar 08.
Article in English | MEDLINE | ID: mdl-33800499

ABSTRACT

While approximately 2000 mutations have been discovered in the gene coding for the cystic fibrosis transmembrane conductance regulator (CFTR), only a small amount (about 10%) is associated with clinical cystic fibrosis (CF) disease. The discovery of the association between CFTR and the hyperactive epithelial sodium channel (ENaC) has raised the question of the influence of ENaC on the clinical CF phenotype. ENaC disturbance contributes to the pathological secretion, and overexpression of one ENaC subunit, the ß-unit, can give a CF-like phenotype in mice with normal acting CFTR. The development of ENaC channel modulators is now in progress. Both CFTR and ENaC are located in the cell membrane and are influenced by its lipid configuration. Recent studies have emphasized the importance of the interaction of lipids and these proteins in the membranes. Linoleic acid deficiency is the most prevailing lipid abnormality in CF, and linoleic acid is an important constituent of membranes. The influence on sodium excretion by linoleic acid supplementation indicates that lipid-protein interaction is of importance for the clinical pathophysiology in CF. Further studies of this association can imply a simple clinical adjuvant in CF therapy.


Subject(s)
Cell Membrane/metabolism , Cystic Fibrosis Transmembrane Conductance Regulator/metabolism , Cystic Fibrosis/metabolism , Epithelial Sodium Channels/metabolism , Linoleic Acid/deficiency , Animals , Cell Membrane/genetics , Cell Membrane/pathology , Cystic Fibrosis/genetics , Cystic Fibrosis/pathology , Cystic Fibrosis Transmembrane Conductance Regulator/genetics , Epithelial Sodium Channels/genetics , Humans , Linoleic Acid/metabolism , Mice
4.
Mol Immunol ; 129: 12-20, 2021 01.
Article in English | MEDLINE | ID: mdl-33254075

ABSTRACT

Cryptocaryon irritans is an obligate parasitic ciliate protozoan that can infect various commercially important mariculture teleosts and cause high lethality and economic loss, especially Larimichthys crocea. Current methods of controlling or preventing this parasite with chemicals or antibiotics are widely considered to be environmentally harmful. The antiparasitic activity of some antimicrobial peptides (AMPs) attracted extensive attention of scholars. In the study, a novel piscidin 5-like type 4 (termed Lc-P5L4) excavated from comparative transcriptome of C. irritans - immuned L. crocea was identified and characterized. Sequence analysis shows the full-length cDNA of Lc-P5L4 is 539 bp containing an open reading frame (ORF) of 198 bp which encodes a peptide of 65 amino acid residues. The genome consists of three exons and two introns which exist in its ORF, and all the exon-intron boundaries are in accordance with classical GT-AG rule (GT/intron/AG). Multiple alignments indicate the signal peptides share highly conserved identity, while mature peptides are more diverse. Phylogenetic analysis displays Lc-P5L4 clusters together with other members of piscidin 5-like family. Next, quantitative Real-time PCR (qRT-PCR) detection found C. irritans infection could upregulate Lc-P5L4 expression level in all tested tissues significantly, it appeared earliest upregulation in the theronts infection stage in the head kidney; the expression contents reached to maximum level in the intestine, gill and muscle during trophonts falling off stage; while it was just upregulated during secondary bacterial infection stage in the liver and spleen. The data showed Lc-P5L4 upregulation time points were in accordance with different infection stages. With recombinant Lc-P5L4 (rLc-P5L4) obtained through Escherichia coli system, in vitro assay showed rLc-P5L4 could cause cilia deactivation, cell bodiesclumping and sticking to each other, then cell membrane rupture and contents leakage. The data illustrated Lc-P5L4 played critical roles in the immune defense against C. irritans infection, and provided another proof that piscidins exhibit multiple anti- C. irritans features.


Subject(s)
Antiparasitic Agents/metabolism , Ciliophora/metabolism , Fish Proteins/genetics , Fish Proteins/metabolism , Perciformes/genetics , Perciformes/metabolism , Amino Acids/genetics , Animals , Antimicrobial Cationic Peptides/genetics , Antimicrobial Cationic Peptides/metabolism , Cell Membrane/genetics , Cell Membrane/metabolism , Cell Membrane/parasitology , Ciliophora Infections/genetics , Ciliophora Infections/metabolism , Ciliophora Infections/parasitology , DNA, Complementary/genetics , Exons/genetics , Fish Diseases/genetics , Fish Diseases/metabolism , Fish Diseases/parasitology , Genome/genetics , Introns/genetics , Liver/metabolism , Liver/parasitology , Open Reading Frames/genetics , Perciformes/parasitology , Phylogeny , Spleen/metabolism , Spleen/parasitology , Transcriptome/genetics , Up-Regulation/genetics
5.
Environ Microbiol ; 23(1): 376-390, 2021 01.
Article in English | MEDLINE | ID: mdl-33196124

ABSTRACT

Cyanobacteria are globally important primary producers and nitrogen fixers with high iron demands. Low ambient dissolved iron concentrations in many aquatic environments mean that these organisms must maintain sufficient and selective transport of iron into the cell. However, the nature of iron transport pathways through the cyanobacterial outer membrane remains obscure. Here we present multiple lines of experimental evidence that collectively support the existence of a novel class of substrate-selective iron porin, Slr1908, in the outer membrane of the cyanobacterium Synechocystis sp. PCC 6803. Elemental composition analysis and short-term iron uptake assays with mutants in Slr1908 reveal that this protein is primarily involved in inorganic iron uptake and contributes less to the accumulation of other metals. Homologues of Slr1908 are widely distributed in both freshwater and marine cyanobacteria, most notably in unicellular marine diazotrophs. Complementary experiments with a homologue of Slr1908 in Synechococcus sp. PCC 7002 restored the phenotype of Synechocystis knockdown mutants, showing that this siderophore producing species also possesses a porin with a similar function in Fe transport. The involvement of a substrate-selective porins in iron uptake may allow cyanobacteria to tightly control iron flux into the cell, particularly in environments where iron concentrations fluctuate.


Subject(s)
Cell Membrane/metabolism , Iron/metabolism , Synechocystis/metabolism , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Biological Transport , Cell Membrane/genetics , Ion Transport , Porins/genetics , Porins/metabolism , Siderophores/metabolism , Synechocystis/genetics
6.
Int J Mol Sci ; 21(10)2020 May 13.
Article in English | MEDLINE | ID: mdl-32414043

ABSTRACT

Investigations in cartilage biology have been hampered by the limited capacity of chondrocytes, especially in rats and humans, to be efficiently transfected. Liposomes are a promising delivery system due to their lipid bilayer structure similar to a biological membrane. Here we used natural rapeseed lecithin, which contains a high level of mono- and poly-unsaturated fatty acids, to evaluate the cytocompatibility of these phospholipids as future potential carriers of biomolecules in joint regenerative medicine. Results show that appropriate concentrations of nanoliposome rapeseed lecithin under 500 µg/mL were safe for chondrocytes and did not induce any alterations of their phenotype. Altogether, these results sustain that they could represent a novel natural carrier to deliver active substances into cartilage cells.


Subject(s)
Cartilage, Articular/growth & development , Chondrocytes/drug effects , Liposomes/pharmacology , Nanoparticles/chemistry , Animals , Brassica napus/chemistry , Cartilage, Articular/drug effects , Cell Membrane/genetics , Drug Delivery Systems , Humans , Lecithins/chemistry , Lecithins/genetics , Lecithins/pharmacology , Liposomes/chemistry , Phospholipids/genetics , Rats , Regenerative Medicine
7.
Methods Mol Biol ; 2054: 283-294, 2019.
Article in English | MEDLINE | ID: mdl-31482462

ABSTRACT

A series of ligand-targeted nanosystems have been rapidly exploited to selectively deliver drug molecules to desired cell populations. The conjugation of protein ligands to the nanoparticle (NP) surface endows nanovehicles with active targeting properties. However, the nonspecific covalent coupling of protein ligands to nanocarriers may compromise the protein targeting due to the uncontrolled ligand orientation as well as the decline in ligand activity during linkage process. With this regard, biomimetic synthetic strategies are employed for the preparation of genetically engineered nanovesicles (GNV) from cellular plasma membrane with targeting moieties on the surface in a ligand-oriented manner. Herein, we introduce the biomimetic synthetic strategy and procedures for GNV preparation. This chapter may guide readers to design analogous NPs for cell-specific targeting by displaying particular protein probes (e.g., antibody, nanobody, and single-chain antibody) on the surface of GNVs.


Subject(s)
Antineoplastic Agents/administration & dosage , Genetic Engineering/methods , Nanoparticles/chemistry , Neoplasms/therapy , Theranostic Nanomedicine/methods , Animals , Antineoplastic Agents/pharmacokinetics , Biomimetic Materials/chemical synthesis , Cell Line, Tumor , Cell Membrane/genetics , Combined Modality Therapy/methods , Doxorubicin/administration & dosage , Doxorubicin/pharmacokinetics , Drug Compounding/methods , Exosomes/genetics , Humans , Hyperthermia, Induced/methods , Liposomes , Mice , Neoplasms/diagnostic imaging , Neoplasms/pathology , Photoacoustic Techniques , Photochemotherapy/methods , Single-Chain Antibodies/administration & dosage , Tissue Distribution , Xenograft Model Antitumor Assays
8.
World J Microbiol Biotechnol ; 35(4): 59, 2019 Mar 26.
Article in English | MEDLINE | ID: mdl-30915597

ABSTRACT

Saccharomyces cerevisiae has been widely used to produce alcoholic beverages and bio-fuels; however, its performance is remarkably compromised by the increased ethanol concentration during the fermentation process. In this study, RNA-sequence analysis was used to investigate the protective effect of green tea polyphenols (GTP) on S. cerevisiae cells from ethanol-induced damage. GO and KEGG analysis showed that to deal with the stress of ethanol, large amounts of genes related to cell wall, cell membrane, basic metabolism and redox regulation were significantly differentially expressed (P < 0.05), while these undesired changes could be partly relieved by administration of GTP, suggesting its potential to enhance the ethanol tolerance of S. cerevisiae. The present study provided a global view of the transcriptomic changes of S. cerevisiae in response to the accumulation of ethanol and the treatment of GTP, which might deepen our understanding about S. cerevisiae and the fermentation process, and thus benefit the development of the bioethanol production industry.


Subject(s)
Ethanol/toxicity , Gene Expression Profiling/methods , Gene Expression Regulation, Fungal/drug effects , Polyphenols/pharmacology , Saccharomyces cerevisiae/drug effects , Sequence Analysis, RNA/methods , Stress, Physiological , Transcriptome , Cell Membrane/genetics , Cell Wall/genetics , Drug Tolerance , Fermentation , Guanosine Triphosphate/metabolism , Industrial Microbiology , Plant Extracts/pharmacology , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae Proteins/genetics , Tea/chemistry
9.
FASEB J ; 33(5): 6442-6455, 2019 05.
Article in English | MEDLINE | ID: mdl-30776316

ABSTRACT

Cellular stress or injury induces release of endogenous danger signals such as ATP, which plays a central role in activating immune cells. ATP is essential for the release of nonclassically secreted cytokines such as IL-1ß but, paradoxically, has been reported to inhibit the release of classically secreted cytokines such as TNF. Here, we reveal that ATP does switch off soluble TNF (17 kDa) release from LPS-treated macrophages, but rather than inhibiting the entire TNF secretion, ATP packages membrane TNF (26 kDa) within microvesicles (MVs). Secretion of membrane TNF within MVs bypasses the conventional endoplasmic reticulum- and Golgi transport-dependent pathway and is mediated by acid sphingomyelinase. These membrane TNF-carrying MVs are biologically more potent than soluble TNF in vivo, producing significant lung inflammation in mice. Thus, ATP critically alters TNF trafficking and secretion from macrophages, inducing novel unconventional membrane TNF signaling via MVs without direct cell-to-cell contact. These data have crucial implications for this key cytokine, particularly when therapeutically targeting TNF in acute inflammatory diseases.-Soni, S., O'Dea, K. P., Tan, Y. Y., Cho, K., Abe, E., Romano, R., Cui, J., Ma, D., Sarathchandra, P., Wilson, M. R., Takata, M. ATP redirects cytokine trafficking and promotes novel membrane TNF signaling via microvesicles.


Subject(s)
Adenosine Triphosphate/immunology , Cell Membrane/immunology , Extracellular Vesicles/immunology , Macrophages/immunology , Pneumonia/immunology , Signal Transduction/immunology , Tumor Necrosis Factor-alpha/immunology , Acute Disease , Adenosine Triphosphate/genetics , Animals , Cell Communication/genetics , Cell Communication/immunology , Cell Membrane/genetics , Endoplasmic Reticulum/genetics , Endoplasmic Reticulum/immunology , Extracellular Vesicles/genetics , Golgi Apparatus/genetics , Golgi Apparatus/immunology , Inflammation/chemically induced , Inflammation/genetics , Inflammation/immunology , Lipopolysaccharides/toxicity , Male , Mice , Mice, Knockout , Pneumonia/chemically induced , Pneumonia/genetics , Signal Transduction/drug effects , Signal Transduction/genetics , Tumor Necrosis Factor-alpha/genetics
10.
Nat Commun ; 10(1): 197, 2019 01 14.
Article in English | MEDLINE | ID: mdl-30643129

ABSTRACT

Salmonella Typhimurium (S. Tm) establishes systemic infection in susceptible hosts by evading the innate immune response and replicating within host phagocytes. Here, we sought to identify inhibitors of intracellular S. Tm replication by conducting parallel chemical screens against S. Tm growing in macrophage-mimicking media and within macrophages. We identify several compounds that inhibit Salmonella growth in the intracellular environment and in acidic, ion-limited media. We report on the antimicrobial activity of the psychoactive drug metergoline, which is specific against intracellular S. Tm. Screening an S. Tm deletion library in the presence of metergoline reveals hypersensitization of outer membrane mutants to metergoline activity. Metergoline disrupts the proton motive force at the bacterial cytoplasmic membrane and extends animal survival during a systemic S. Tm infection. This work highlights the predictive nature of intracellular screens for in vivo efficacy, and identifies metergoline as a novel antimicrobial active against Salmonella.


Subject(s)
Anti-Bacterial Agents/pharmacology , Macrophages/microbiology , Metergoline/pharmacology , Salmonella Infections/drug therapy , Salmonella typhimurium/drug effects , Animals , Anti-Bacterial Agents/therapeutic use , Cell Membrane/drug effects , Cell Membrane/genetics , Disease Models, Animal , Drug Evaluation, Preclinical/methods , Female , Gene Deletion , High-Throughput Screening Assays/methods , Humans , Macrophages/immunology , Macrophages/ultrastructure , Metergoline/therapeutic use , Methicillin-Resistant Staphylococcus aureus/drug effects , Mice , Mice, Inbred C57BL , Microbial Sensitivity Tests , Microscopy, Atomic Force , RAW 264.7 Cells , Salmonella Infections/immunology , Salmonella Infections/microbiology , Salmonella Infections/mortality , Salmonella typhimurium/genetics , Salmonella typhimurium/pathogenicity , Treatment Outcome
11.
Cell Death Dis ; 9(12): 1194, 2018 12 13.
Article in English | MEDLINE | ID: mdl-30546087

ABSTRACT

The uncarboxylated form of osteocalcin (GluOC) regulates glucose and lipid metabolism in mice. We previously showed that low-dose (≤10 ng/ml) GluOC induces the expression of adiponectin and peroxisome proliferator-activated receptor γ (PPARγ) via a cAMP-PKA-ERK-CREB signaling pathway in 3T3-L1 adipocytes. We also noticed that high-dose (≥20 ng/ml) GluOC inhibits the expression of adiponectin and PPARγ in these cells. We have here explored the mechanism underlying these effects of high-dose GluOC. High-dose GluOC triggered morphological changes in 3T3-L1 adipocytes suggestive of the induction of cell death. It activated the putative GluOC receptor GPRC6A and thereby induced the production of cAMP and activation of protein kinase A (PKA), similar to signaling by low-dose GluOC with the exception that the catalytic subunit of PKA also entered the nucleus. Cytosolic PKA induced phosphorylation of cAMP response element-binding protein (CREB) at serine-133 via extracellular signal-regulated kinase (ERK). Nuclear PKA appeared to mediate the inhibitory phosphorylation of salt-inducible kinase 2 (SIK2) at serine-358 and thereby to alleviate the inhibitory phosphorylation of the CREB co-activator p300 at serine-89. The activation of CREB and p300 resulted in increased expression of the transcription factor FoxO1 and consequent upregulation of Fas ligand (FasL) at the plasma membrane. The interaction of FasL with Fas on neighboring adipocytes triggered the phosphorylation at threonine-357/serine-358 and homotrimerization of mixed-lineage kinase domain-like protein (MLKL), a key regulator of necroptosis, as well as Ca2+ influx via transient receptor potential melastatin 7 (TRPM7), the generation of reactive oxygen species and lipid peroxides, and dephosphorylation of dynamin-related protein 1 (DRP1) at serine-637, resulting in mitochondrial fragmentation. Together, our results indicate that high-dose GluOC triggers necroptosis through upregulation of FasL at the plasma membrane in a manner dependent of activation of CREB-p300, followed by the activation of Fas signaling in neighboring adipocytes.


Subject(s)
Cell Death/genetics , Cyclic AMP Response Element-Binding Protein/genetics , Fas Ligand Protein/genetics , fas Receptor/genetics , p300-CBP Transcription Factors/genetics , 3T3-L1 Cells , Adipocytes/drug effects , Adipocytes/metabolism , Adiponectin/genetics , Animals , Cell Death/drug effects , Cell Membrane/genetics , Cyclic AMP/genetics , Cyclic AMP-Dependent Protein Kinases/genetics , Dynamins/genetics , Gene Expression Regulation, Developmental/drug effects , Glucose/metabolism , Lipid Metabolism/drug effects , MAP Kinase Signaling System/drug effects , Mice , Osteocalcin/pharmacology , Phosphorylation/drug effects , TRPM Cation Channels/genetics
12.
Proc Natl Acad Sci U S A ; 115(39): E9125-E9134, 2018 09 25.
Article in English | MEDLINE | ID: mdl-30194235

ABSTRACT

Signal transduction and cytoskeleton networks in a wide variety of cells display excitability, but the mechanisms are poorly understood. Here, we show that during random migration and in response to chemoattractants, cells maintain complementary spatial and temporal distributions of Ras activity and phosphatidylinositol (3,4)-bisphosphate [PI(3,4)P2]. In addition, depletion of PI(3,4)P2 by disruption of the 5-phosphatase, Dd5P4, or by recruitment of 4-phosphatase INPP4B to the plasma membrane, leads to elevated Ras activity, cell spreading, and altered migratory behavior. Furthermore, RasGAP2 and RapGAP3 bind to PI(3,4)P2, and the phenotypes of cells lacking these genes mimic those with low PI(3,4)P2 levels, providing a molecular mechanism. These findings suggest that Ras activity drives PI(3,4)P2 down, causing the PI(3,4)P2-binding GAPs to dissociate from the membrane, further activating Ras, completing a positive-feedback loop essential for excitability. Consistently, a computational model incorporating such a feedback loop in an excitable network model accurately simulates the dynamic distributions of active Ras and PI(3,4)P2 as well as cell migratory behavior. The mutually inhibitory Ras-PI(3,4)P2 mechanisms we uncovered here provide a framework for Ras regulation that may play a key role in many physiological processes.


Subject(s)
Cell Membrane/metabolism , Dictyostelium/metabolism , Phosphatidylinositol Phosphates/metabolism , Protozoan Proteins/metabolism , Signal Transduction/physiology , ras Proteins/metabolism , Cell Membrane/genetics , Dictyostelium/genetics , Phosphatidylinositol Phosphates/genetics , Protozoan Proteins/genetics , ras Proteins/genetics
13.
Plant Cell ; 30(9): 2038-2056, 2018 09.
Article in English | MEDLINE | ID: mdl-30150313

ABSTRACT

Certain regions on the surfaces of developing pollen grains exhibit very limited deposition of pollen wall exine. These regions give rise to pollen apertures, which are highly diverse in their patterns and specific for individual species. Arabidopsis thaliana pollen develops three equidistant longitudinal apertures. The precision of aperture formation suggests that, to create them, pollen employs robust mechanisms that generate distinct cellular domains. To identify players involved in this mechanism, we screened natural Arabidopsis accessions and discovered one accession, Martuba, whose apertures form abnormally due to the disruption of the protein kinase D6PKL3. During pollen development, D6PKL3 accumulates at the three plasma membrane domains underlying future aperture sites. Both D6PKL3 localization and aperture formation require kinase activity. Proper D6PKL3 localization is also dependent on a polybasic motif for phosphoinositide interactions, and we identified two phosphoinositides that are specifically enriched at the future aperture sites. The other known aperture factor, INAPERTURATE POLLEN1, fails to aggregate at the aperture sites in d6pkl3 mutants, changes its localization when D6PKL3 is mislocalized, and, in turn, affects D6PKL3 localization. The discovery of aperture factors provides important insights into the mechanisms cells utilize to generate distinct membrane domains, develop cell polarity, and pattern their surfaces.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Cell Membrane/metabolism , Pollen/metabolism , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Cell Membrane/genetics , Mutation , Pollen/genetics
14.
PLoS Genet ; 13(9): e1007004, 2017 Sep.
Article in English | MEDLINE | ID: mdl-28886012

ABSTRACT

Dietary fatty acids can be incorporated directly into phospholipids. This poses a specific challenge to cellular membranes since their composition, hence properties, could greatly vary with different diets. That vast variations in diets are tolerated therefore implies the existence of regulatory mechanisms that monitor and regulate membrane compositions. Here we show that the adiponectin receptor AdipoR2, and its C. elegans homolog PAQR-2, are essential to counter the membrane rigidifying effects of exogenously provided saturated fatty acids. In particular, we use dietary supplements or mutated E. coli as food, together with direct measurements of membrane fluidity and composition, to show that diets containing a high ratio of saturated to monounsaturated fatty acids cause membrane rigidity and lethality in the paqr-2 mutant. We also show that mammalian cells in which AdipoR2 has been knocked-down by siRNA are unable to prevent the membrane-rigidifying effects of palmitic acid. We conclude that the PAQR-2 and AdipoR2 proteins share an evolutionarily conserved function that maintains membrane fluidity in the presence of exogenous saturated fatty acids.


Subject(s)
Caenorhabditis elegans Proteins/genetics , Cell Membrane/genetics , Membrane Fluidity/genetics , Membrane Proteins/genetics , Receptors, Adiponectin/genetics , Animals , Caenorhabditis elegans/genetics , Caenorhabditis elegans Proteins/metabolism , Cell Membrane/chemistry , Cell Membrane/metabolism , Fatty Acids/chemistry , Fatty Acids/metabolism , HEK293 Cells , Humans , Membrane Proteins/metabolism , Phospholipids/chemistry , Phospholipids/genetics , RNA, Small Interfering , Receptors, Adiponectin/metabolism
15.
BMC Plant Biol ; 17(1): 2, 2017 01 05.
Article in English | MEDLINE | ID: mdl-28056797

ABSTRACT

BACKGROUND: The coordination of pollen tube (PT) growth, guidance and timely growth arrest and rupture mediated by PT-pistil interaction is crucial for the PT to transport sperm cells into ovules for double fertilization. The plasma membrane (PM) represents an important interface for cell-cell interaction, and PM proteins of PTs are pioneers for mediating PT integrity and interaction with pistils. Thus, understanding the mechanisms underlying these events is important for proteomics. RESULTS: Using the efficient aqueous polymer two-phase system and alkali buffer treatment, we prepared high-purity PM from mature and germinated pollen of rice. We used iTRAQ quantitative proteomic methods and identified 1,121 PM-related proteins (PMrPs) (matched to 899 loci); 192 showed differential expression in the two pollen cell types, 119 increased and 73 decreased in abundance during germination. The PMrP and differentially expressed PMrP sets all showed a functional skew toward signal transduction, transporters, wall remodeling/metabolism and membrane trafficking. Their genomic loci had strong chromosome bias. We found 37 receptor-like kinases (RLKs) from 8 kinase subfamilies and 209 transporters involved in flux of diversified ions and metabolites. In combination with the rice pollen transcriptome data, we revealed that in general, the protein expression of these PMrPs disagreed with their mRNA expression, with inconsistent mRNA expression for 74% of differentially expressed PMrPs. CONCLUSIONS: This study identified genome-wide pollen PMrPs, and provided insights into the membrane profile of receptor-like kinases and transporters important for pollen tube growth and interaction with pistils. These pollen PMrPs and their mRNAs showed discordant expression. This work provides resource and knowledge to further dissect mechanisms by which pollen or the PT controls PMrP abundance and monitors interactions and ion and metabolite exchanges with female cells in rice.


Subject(s)
Cell Membrane/metabolism , Flowers/metabolism , Membrane Transport Proteins/metabolism , Oryza/metabolism , Plant Proteins/metabolism , Pollen/growth & development , Protein Kinases/metabolism , Cell Membrane/enzymology , Cell Membrane/genetics , Flowers/enzymology , Flowers/genetics , Flowers/growth & development , Membrane Transport Proteins/genetics , Multigene Family , Oryza/enzymology , Oryza/genetics , Oryza/growth & development , Plant Proteins/genetics , Pollen/enzymology , Pollen/genetics , Pollen/metabolism , Protein Kinases/genetics , Proteomics
16.
Virulence ; 8(7): 1170-1188, 2017 10 03.
Article in English | MEDLINE | ID: mdl-28118090

ABSTRACT

The emergence of multiresistant Gram-negative bacteria requires new therapies for combating bacterial infections. Targeting the biogenesis of virulence factors could be an alternative strategy instead of killing bacteria with antibiotics. The outer membrane (OM) of Gram-negative bacteria acts as a physical barrier. At the same time it facilitates the exchange of molecules and harbors a multitude of proteins associated with virulence. In order to insert proteins into the OM, an essential oligomeric membrane-associated protein complex, the ß-barrel assembly machinery (BAM) is required. Being essential for the biogenesis of outer membrane proteins (OMPs) the BAM and also periplasmic chaperones may serve as attractive targets to develop novel antiinfective agents. Herein, we aimed to elucidate which proteins belonging to the OMP biogenesis machinery have the most important function in granting bacterial fitness, OM barrier function, facilitating biogenesis of dedicated virulence factors and determination of overall virulence. To this end we used the enteropathogen Yersinia enterocolitica as a model system. We individually knocked out all non-essential components of the BAM (BamB, C and E) as well as the periplasmic chaperones DegP, SurA and Skp. In summary, we found that the most profound phenotypes were produced by the loss of BamB or SurA with both knockouts resulting in significant attenuation or even avirulence of Ye in a mouse infection model. Thus, we assume that both BamB and SurA are promising targets for the development of new antiinfective drugs in the future.


Subject(s)
Anti-Bacterial Agents/pharmacology , Cell Membrane/drug effects , Yersinia Infections/microbiology , Yersinia enterocolitica/metabolism , Animals , Bacterial Outer Membrane Proteins/antagonists & inhibitors , Bacterial Outer Membrane Proteins/chemistry , Bacterial Outer Membrane Proteins/genetics , Bacterial Outer Membrane Proteins/metabolism , Cell Membrane/chemistry , Cell Membrane/genetics , Cell Membrane/metabolism , Drug Evaluation, Preclinical , Female , Humans , Mice , Mice, Inbred C57BL , Protein Folding , Protein Structure, Secondary/drug effects , Yersinia enterocolitica/chemistry , Yersinia enterocolitica/drug effects , Yersinia enterocolitica/genetics
17.
Apoptosis ; 22(2): 175-187, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27826675

ABSTRACT

The effects of clary sage (Salvia sclarea L.) oil (CS-oil), and its two main components, linalool (Lol) and linalyl acetate (LA), on cells of the eukaryotic human pathogen yeast Candida albicans were studied. Dynamic and thermodynamic properties of the plasma membrane were investigated by electron paramagnetic resonance (EPR) spectroscopy, with 5-doxylstearic acid (5-SASL) and 16-SASL as spin labels. The monitoring of the head group regions with 5-SASL revealed break-point frequency decrease in a temperature dependent manner of the plasma membrane between 9.55 and 13.15 °C in untreated, in CS-oil-, Lol- and LA-treated membranes. The results suggest a significant increase in fluidity of the treated plasma membranes close to the head groups. Comparison of the results observed with the two spin labels demonstrated that CS-oil and LA induced an increased level of fluidization at both depths of the plasma membrane. Whereas Lol treatment induced a less (1 %) ordered bilayer organization in the superficial regions and an increased (10 %) order of the membrane leaflet in deeper layers. Acute toxicity tests and EPR results indicated that both the apoptotic and the effects exerted on the plasma membrane fluidity depended on the composition and chemical structure of the examined materials. In comparison with the control, treatment with CS-oil, Lol or LA induced 13.0, 12.3 and 26.4 % loss respectively, of the metabolites absorbing at 260 nm, as a biological consequence of the plasma membrane fluidizing effects. Our results confirmed that clary sage oil causes plasma membrane perturbations which leads to cell apoptosis process.


Subject(s)
Apoptosis/genetics , Candida albicans/genetics , Cell Membrane/genetics , Acyclic Monoterpenes , Antifungal Agents/pharmacology , Apoptosis/drug effects , Candida albicans/drug effects , Cell Membrane/drug effects , Electron Spin Resonance Spectroscopy , Membrane Fluidity/drug effects , Monoterpenes/pharmacology , Plant Oils/chemistry , Plant Oils/pharmacology , Salvia/chemistry , Spin Labels
18.
PLoS Genet ; 12(7): e1006140, 2016 07.
Article in English | MEDLINE | ID: mdl-27448097

ABSTRACT

Spatially and temporally regulated membrane trafficking events incorporate membrane and cell wall materials into the pollen tube apex and are believed to underlie the rapid pollen tube growth. In plants, the molecular mechanisms and physiological functions of intra-Golgi transport and Golgi integrity maintenance remain largely unclear. The conserved oligomeric Golgi (COG) complex has been implicated in tethering of retrograde intra-Golgi vesicles in yeast and mammalian cells. Using genetic and cytologic approaches, we demonstrate that T-DNA insertions in Arabidopsis COG complex subunits, COG3 and COG8, cause an absolute, male-specific transmission defect that can be complemented by expression of COG3 and COG8 from the LAT52 pollen promoter, respectively. No obvious abnormalities in the microgametogenesis of the two mutants are observed, but in vitro and in vivo pollen tube growth are defective. COG3 or COG8 proteins fused to green fluorescent protein (GFP) label the Golgi apparatus. In pollen of both mutants, Golgi bodies exhibit altered morphology. Moreover, γ-COP and EMP12 proteins lose their tight association with the Golgi. These defects lead to the incorrect deposition of cell wall components and proteins during pollen tube growth. COG3 and COG8 interact directly with each other, and a structural model of the Arabidopsis COG complex is proposed. We believe that the COG complex helps to modulate Golgi morphology and vesicle trafficking homeostasis during pollen tube tip growth.


Subject(s)
Adaptor Proteins, Vesicular Transport/genetics , Arabidopsis Proteins/genetics , Arabidopsis/genetics , Cell Membrane/genetics , Membrane Proteins/genetics , Pollen Tube/genetics , Protein Subunits/genetics , Arabidopsis/growth & development , Cell Membrane/metabolism , Cell Wall/genetics , DNA, Bacterial/genetics , Gene Expression Regulation, Plant , Glycosylation , Golgi Apparatus/genetics , Membrane Proteins/metabolism , Mutant Proteins/genetics , Pollen/genetics , Pollen/growth & development , Pollen Tube/growth & development , Protein Transport/genetics
19.
Biochim Biophys Acta ; 1861(9 Pt B): 1329-1335, 2016 Sep.
Article in English | MEDLINE | ID: mdl-27086144

ABSTRACT

Sphingolipids and their phosphorylated derivatives are ubiquitous bio-active components of cells. They are structural elements in the lipid bilayer and contribute to the dynamic nature of the membrane. They have been implicated in many cellular processes in yeast and animal cells, including aspects of signaling, apoptosis, and senescence. Although sphingolipids have a better defined role in animal systems, they have been shown to be central to many essential processes in plants including but not limited to, pollen development, signal transduction and in the response to biotic and abiotic stress. A fuller understanding of the roles of sphingolipids within plants has been facilitated by classical biochemical studies and the identification of mutants of model species. Recently the development of powerful mass spectrometry techniques hailed the advent of the emerging field of lipidomics enabling more accurate sphingolipid detection and quantitation. This review will consider plant sphingolipid biosynthesis and function in the context of these new developments. This article is part of a Special Issue entitled: Plant Lipid Biology edited by Kent D. Chapman and Ivo Feussner.


Subject(s)
Cell Membrane/genetics , Lipid Bilayers/metabolism , Pollen/genetics , Sphingolipids/genetics , Acclimatization/genetics , Cell Membrane/metabolism , Phosphorylation , Pollen/metabolism , Signal Transduction/genetics , Sphingolipids/isolation & purification , Sphingolipids/metabolism , Stress, Physiological/genetics
20.
PLoS Genet ; 12(2): e1005890, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26926121

ABSTRACT

Bardet-Biedl syndrome (BBS) is a highly pleiotropic autosomal recessive disorder associated with a wide range of phenotypes including obesity. However, the underlying mechanism remains unclear. Here, we show that neuronal BBSome is a critical determinant of energy balance through its role in the regulation of the trafficking of the long signaling form of the leptin receptor (LRb). Targeted disruption of the BBSome by deleting the Bbs1 gene from the nervous system causes obesity in mice, and this phenotype is reproduced by ablation of the Bbs1 gene selectively in the LRb-expressing cells, but not from adipocytes. Obesity developed as a consequence of both increased food intake and decreased energy expenditure in mice lacking the Bbs1 gene in LRb-expressing cells. Strikingly, the well-known role of BBS proteins in the regulation of ciliary formation and function is unlikely to account for the obesogenic effect of BBS1 loss as disruption of the intraflagellar transport (IFT) machinery required for ciliogenesis by deleting the Ift88 gene in LRb-expressing cells caused a marginal increase in body weight and adiposity. Instead, we demonstrate that silencing BBS proteins, but not IFT88, impair the trafficking of the LRb to the plasma membrane leading to central leptin resistance in a manner independent of obesity. Our data also demonstrate that postnatal deletion of the Bbs1 gene in the mediobasal hypothalamus can cause obesity in mice, arguing against an early neurodevelopmental origin of obesity in BBS. Our results depict a novel mechanism underlying energy imbalance and obesity in BBS with potential implications in common forms of human obesity.


Subject(s)
Bardet-Biedl Syndrome/metabolism , Cell Membrane/metabolism , Receptors, Leptin/metabolism , Animals , Bardet-Biedl Syndrome/genetics , Cell Membrane/genetics , Energy Metabolism/physiology , Female , Hypothalamus/physiology , Mice, Mutant Strains , Mice, Transgenic , Microtubule-Associated Proteins/genetics , Microtubule-Associated Proteins/metabolism , Multiprotein Complexes/metabolism , Obesity/genetics , Obesity/metabolism , Protein Transport , Receptors, Leptin/genetics , Tumor Suppressor Proteins/genetics , Tumor Suppressor Proteins/metabolism
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