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1.
Sci Rep ; 12(1): 2603, 2022 02 16.
Article in English | MEDLINE | ID: mdl-35173221

ABSTRACT

Insect monitoring is critical to improve our understanding and ability to preserve and restore biodiversity, sustainably produce crops, and reduce vectors of human and livestock disease. Conventional monitoring methods of trapping and identification are time consuming and thus expensive. Automation would significantly improve the state of the art. Here, we present a network of distributed wireless sensors that moves the field towards automation by recording backscattered near-infrared modulation signatures from insects. The instrument is a compact sensor based on dual-wavelength infrared light emitting diodes and is capable of unsupervised, autonomous long-term insect monitoring over weather and seasons. The sensor records the backscattered light at kHz pace from each insect transiting the measurement volume. Insect observations are automatically extracted and transmitted with environmental metadata over cellular connection to a cloud-based database. The recorded features include wing beat harmonics, melanisation and flight direction. To validate the sensor's capabilities, we tested the correlation between daily insect counts from an oil seed rape field measured with six yellow water traps and six sensors during a 4-week period. A comparison of the methods found a Spearman's rank correlation coefficient of 0.61 and a p-value = 0.0065, with the sensors recording approximately 19 times more insect observations and demonstrating a larger temporal dynamic than conventional yellow water trap monitoring.


Subject(s)
Automation/methods , Biodiversity , Biological Monitoring/methods , Infrared Rays , Insect Vectors/physiology , Wireless Technology/instrumentation , Animals , Brassica napus/parasitology , Databases as Topic , Rapeseed Oil , Seasons , Weather
2.
J Acad Nutr Diet ; 122(3): 525-532, 2022 03.
Article in English | MEDLINE | ID: mdl-34687947

ABSTRACT

BACKGROUND: Nearly a third of young US children take multivitamin/mineral (MVM) dietary supplements, yet it is unclear how formulations compare with requirements. OBJECTIVE: Describe the number and amounts of micronutrients contained in MVMs for young children and compare suggested amounts on product labels to micronutrient requirements. DESIGN: Cross-sectional. SETTING: All 288 MVMs on the market in the United States in the National Institutes of Health's Dietary Supplement Label Database in 2018 labeled for children 1 to <4 years old. MAIN OUTCOME MEASURES: Number of MVM products and amounts per day of micronutrients in each product suggested on labels compared with requirements represented by age-appropriate Daily Values (DV). Micronutrients of public health concern identified by the Dietary Guidelines for Americans (DGA) 2015-2020 (DGA 2015) and DGA 2020-2025 (DGA 2020) or those of concern for exceeding the upper tolerable intake levels. STATISTICAL ANALYSES: Number of products and percent DV per day provided by each micronutrient in each product. RESULTS: The 288 MVMs contained a mean of 10.1 ± 2.27 vitamins and 4.59 ± 2.27 minerals. The most common were, in rank order, vitamins C, A, D, E, B6, B12; zinc, biotin, pantothenic acid, iodine, and folic acid. For micronutrients denoted by the DGA 2015 and DGA 2020 of public health concern, 56% of the 281 products containing vitamin D, 4% of the 144 with calcium, and none of the 60 containing potassium provided at least half of the DV. The upper tolerable intake level was exceeded by 49% of 197 products with folic acid, 17% of 283 with vitamin A, and 14% of 264 with zinc. Most MVMs contained many of 16 other vitamins and minerals identified in national surveys as already abundant in children's diets. CONCLUSIONS: A reexamination of the amounts and types of micronutrients in MVMs might consider formulations that better fill critical gaps in intakes and avoid excess.


Subject(s)
Dietary Supplements , Micronutrients/administration & dosage , Nutritional Requirements , Trace Elements/administration & dosage , Vitamins/administration & dosage , Child, Preschool , Cross-Sectional Studies , Databases as Topic , Food Labeling , Humans , Infant , Nutrition Policy , Nutritional Status , Recommended Dietary Allowances , United States
3.
Interface (Botucatu, Online) ; 26: e210700, 2022. tab, ilus
Article in Portuguese | LILACS | ID: biblio-1385937

ABSTRACT

Com o objetivo de investigar os Itinerários Terapêuticos percorridos pela população brasileira em situação de vulnerabilidade social na busca do cuidado em saúde durante a pandemia da Covid-19, foi realizada uma revisão de escopo de julho a novembro de 2021, conforme proposta de Joanna Briggs Institute, nas bases BVS, PubMed, Embase, Scielo, PsycInfo, Scopus e Web of Science, dentro do recorte de 2020 e 2021. Foram analisados 11 artigos subdivididos em três categorias: estratégias de cuidado das populações; ofertas em saúde; e dificuldades de acesso à saúde. O resultado explicitou lacunas e potencialidades existentes nos Itinerários Terapêuticos nessa busca do cuidado em saúde e como esses aspectos ficaram mais evidentes no período pandêmico. Percebeu-se um movimento por parte dessas populações vulneráveis para superar dificuldades cotidianas que determinam as condições desfavoráveis para os cuidados em saúde.(AU)


Con el objetivo de investigar los itinerarios terapéuticos recorridos a la búsqueda de cuidado de salud por parte de la población brasileña en situación de vulnerabilidad social durante la pandemia de Covid-19, se realizó, entre julio y noviembre de 2021, una revisión de alcance, conforme propuesta del Joanna Briggs Institute, en las bases BVS, PubMed, EMBASE, Scielo, PsycInfo, Scopus y Web of Science dentro del recorte de 2020 y 2021. Se analizaron 11 artículos subdivididos en tres categorías: estrategia de cuidado de las poblaciones; ofertas de salud; y dificultades de acceso a la salud. El resultado dejó claras las lagunas y potencialidades existentes en los itinerarios terapéuticos a la búsqueda del cuidado de salud de las poblaciones en situación de vulnerabilidad social y cómo esos aspectos quedaron más en evidencia en el período de la pandemia. Se percibió un movimiento por parte de esas poblaciones para superar dificultades cotidianas que determinan las condiciones desfavorables para los cuidados de salud.(AU)


With the objective of investigate the therapeutic itineraries followed for search the health care by the brazilian population in a situation of social vulnerability during the covid-19 pandemic, a scope review was carried out from July to September 2021, as proposed by the Joanna Briggs Institute, in the BVS, PubMed, EMBASE, Scielo, PsycInfo, Scopus and Web of Science databases within the 2020 and 2021 clippings. 11 articles were analyzed and divided into three categories: strategies care of population; health offerings; difficulties in accessing healthcare. Results explained gaps and potentialities existing on therapeutic itineraries in the search for health care for populations in a situation of social vulnerability and how these aspects became more evident in this pandemic period. There was a movement of this vulnerable populations to overcome the daily difficulties that determine the unfavorable conditions for health care.(AU)


Subject(s)
Humans , Vulnerable Populations , COVID-19 , Therapeutic Itinerary , Databases as Topic/instrumentation
4.
Nutrients ; 13(12)2021 Nov 24.
Article in English | MEDLINE | ID: mdl-34959759

ABSTRACT

The European Commission funded project Stance4Health (S4H) aims to develop a complete personalised nutrition service. In order to succeed, sources of information on nutritional composition and other characteristics of foods need to be as comprehensive as possible. Food composition tables or databases (FCT/FCDB) are the most commonly used tools for this purpose. The aim of this study is to describe the harmonisation efforts carried out to obtain the Stance4Health FCDB. A total of 10 FCT/FCDB were selected from different countries and organizations. Data were classified using FoodEx2 and INFOODS tagnames to harmonise the information. Hazard analysis and critical control points analysis was applied as the quality control method. Data were processed by spreadsheets and MySQL. S4H's FCDB is composed of 880 elements, including nutrients and bioactive compounds. A total of 2648 unified foods were used to complete the missing values of the national FCDB used. Recipes and dishes were estimated following EuroFIR standards via linked tables. S4H's FCDB will be part of the smartphone app developed in the framework of the Stance4Health European project, which will be used in different personalized nutrition intervention studies. S4H FCDB has great perspectives, being one of the most complete in terms of number of harmonized foods, nutrients and bioactive compounds included.


Subject(s)
Data Management/methods , Databases as Topic/standards , Food Analysis/statistics & numerical data , Food/statistics & numerical data , Nutrition Therapy , Europe , Food/standards , Food Analysis/standards , Humans , Nutrients/analysis , Phytochemicals/analysis , Proportional Hazards Models , Quality Control
5.
Nutrients ; 13(10)2021 Sep 24.
Article in English | MEDLINE | ID: mdl-34684346

ABSTRACT

The global food system is facing multiple problems, including rising food insecurity, degrading environments, and an increased incidence of diet-related chronic diseases. International organizations are thus calling for a transition toward territorialized food systems to alleviate some of these challenges. Yet, limited evidence supporting the benefits of territorialized food systems is available. Our objective was to summarize the current body of literature on territorialized food systems and their impacts on human health, food security, and the environment using a rapid review methodology. Articles were retrieved from three databases and analyzed using keywords and inclusion criteria corresponding to territorialized food systems, environment, human health, and food security. Six relevant publications were identified. While this limited evidence suggests that territorialized food systems may have positive effects on all three dimensions, data are not consistent across publications. For example, territorialized food systems may contribute to improved diet quality, provide agroecosystem services, and contribute to food security. However, food produced within these food systems may have a higher carbon footprint and be less available than industrially produced food. This rapid review also highlights the siloed nature of the current research on territorialized food systems and emphasizes the need for more holistic and interdisciplinary research.


Subject(s)
Environment , Food Security , Food , Health , Climate , Databases as Topic , Humans , Publications
6.
Front Immunol ; 12: 636614, 2021.
Article in English | MEDLINE | ID: mdl-33868261

ABSTRACT

The Na+/K+-ATPase (NKA), has been proposed as a signal transducer involving various pathobiological processes, including tumorigenesis. However, the clinical relevance of NKA in hepatocellular carcinoma (HCC) has not been well studied. This study revealed the upregulation of mRNA of ATP1A1, ATP1B1, and ATP1B3 in HCC using TCGA, ICGC, and GEO database. Subsequently, ATP1B3 was demonstrated as an independent prognostic factor of overall survival (OS) of HCC. To investigate the potential mechanisms of ATP1B3 in HCC, we analyzed the co-expression network using LinkedOmics and found that ATP1B3 co-expressed genes were associated with immune-related biological processes. Furthermore, we found that ATP1B3 was correlated immune cell infiltration and immune-related cytokines expression in HCC. The protein level of ATP1B3 was also validated as a prognostic significance and was correlated with immune infiltration in HCC using two proteomics datasets. Finally, functional analysis revealed that ATP1B3 was increased in HCC cells and tissues, silenced ATP1B3 repressed HCC cell proliferation, migration, and promoted HCC cell apoptosis and epithelial to mesenchymal transition (EMT). In conclusion, these findings proved that ATP1B3 could be an oncogene and it was demonstrated as an independent prognostic factor and correlated with immune infiltration in HCC, revealing new insights into the prognostic role and potential immune regulation of ATP1B3 in HCC progression and provide a novel possible therapeutic strategy for HCC.


Subject(s)
Biomarkers, Tumor/metabolism , Carcinoma, Hepatocellular/metabolism , Liver Neoplasms/metabolism , Sodium-Potassium-Exchanging ATPase/metabolism , Biomarkers, Tumor/genetics , Carcinogenesis , Carcinoma, Hepatocellular/diagnosis , Carcinoma, Hepatocellular/mortality , Databases as Topic , Female , Gene Expression Profiling , Humans , Liver Neoplasms/diagnosis , Liver Neoplasms/mortality , Male , Molecular Targeted Therapy , Neoplasm Staging , Prognosis , Proteome , Sodium-Potassium-Exchanging ATPase/genetics , Survival Analysis
7.
PLoS One ; 16(2): e0246252, 2021.
Article in English | MEDLINE | ID: mdl-33534860

ABSTRACT

OBJECTIVE: To date, no study has evaluated the detection rate of head and neck squamous cell carcinoma (HNSCC) in cause-of-death records in Europe. Our objectives were to compare the number of deaths attributable to HNSCC from two national databases in France and to identify factors associated with under-reporting of HNSCC in cause-of-death records. METHODS: The national hospital discharge database and the national underlying cause-of-death records were compared for all HNSCC-attributable deaths in adult patients from 2008 to 2012 in France. Factors associated with under-reporting of HNSCC in cause-of-death records were assessed using multivariate Poisson regression. RESULTS: A total of 41,503 in-hospital deaths were attributable to HNSCC as compared to 25,647 deaths reported in national UCoD records (a detection rate of 62%). Demographics at death were similar in both databases with respect to gender (83% men), age (54% premature deaths at 25-64 years), and geographic distribution. In multivariate Poisson regression, under-reporting of HNSCC in cause-of-death records significantly increased in 2012 compared to 2010 (+7%) and was independently associated with a primary HNSCC site other than the larynx, a former primary or second synchronous cancer other than HNSCC, distant metastasis, palliative care, and death in hospitals other than comprehensive cancer care centers. The main study results were robust in a sensitivity analysis which also took into account deaths outside hospital (overall, 51,129 HNSCC-attributable deaths; a detection rate of 50%). For the year 2012, the age-standardized mortality rate for HNSCC derived from underlying cause-of-death records was less than half that derived from hospital discharge summaries (14.7 compared to 34.1 per 100,000 for men and 2.7 compared to 6.2 per 100,000 for women). CONCLUSION: HNSCC is largely under-reported in cause-of-death records. This study documents the value of national hospital discharge databases as a complement to death certificates for ascertaining cancer deaths.


Subject(s)
Carcinoma, Squamous Cell/mortality , Death Certificates , Head and Neck Neoplasms/mortality , Adult , Age Factors , Aged , Aged, 80 and over , Carcinoma, Squamous Cell/epidemiology , Cause of Death , Databases as Topic , Female , France/epidemiology , Head and Neck Neoplasms/epidemiology , Humans , Male , Middle Aged , Patient Discharge/statistics & numerical data , Poisson Distribution , Sex Factors
8.
BMC Complement Med Ther ; 21(1): 9, 2021 Jan 06.
Article in English | MEDLINE | ID: mdl-33407404

ABSTRACT

ABSTACT: BACKGROUND: Epilepsy, one of the most common neurological disorders, affects over 70 million people worldwide. Rhynchophylline displays a wide variety of pharmacologic actives. However, the pharmacologic effects of rhynchophylline and its mechanisms against epilepsy have not been systematically elucidated. METHODS: The oral bioavailability and druglikeness of rhynchophylline were evaluated using the Traditional Chinese Medicine Systems Pharmacology Database. Rhynchophylline target genes to treat epilepsy were identified using PharmMapper, SwissTargetPrediction and DrugBank databases integration. Protein-protein interaction analysis was carried out by utilizing the GeneMANIA database. WebGestalt was employed to perform Gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses. The drug-disease-target-Gene Ontology-pathway network was constructed using Cytoscape. RESULTS: The oral bioavailability and druglikeness of rhynchophylline were calculated to be 41.82% and 0.57, respectively. A total of 20 rhynchophylline target genes related to epilepsy were chosen. Among the 20 genes and their interacting genes, 54.00% shared protein domains and 16.61% displayed co-expression characteristics. Gene ontology, Kyoto Encyclopedia of Genes and Genomes and network analyses illustrate that these targets were significantly enriched in regulation of sensory perception, morphine addiction, neuroactive ligand-receptor interaction and other pathways or biological processes. CONCLUSION: In short, rhynchophylline targets multiple genes or proteins, biological processes and pathways. It shapes a multiple-layer network that exerts systematic pharmacologic activities on epilepsy.


Subject(s)
Drugs, Chinese Herbal/therapeutic use , Epilepsy/drug therapy , Molecular Targeted Therapy , Oxindoles/therapeutic use , Databases as Topic , Drugs, Chinese Herbal/pharmacology , Epilepsy/genetics , Humans , Oxindoles/pharmacokinetics , Phytotherapy , Protein Interaction Maps , Uncaria
9.
J Robot Surg ; 15(1): 37-44, 2021 Feb.
Article in English | MEDLINE | ID: mdl-32277400

ABSTRACT

Evaluation of safety is of paramount importance with adoption of novel surgical technology. Although robotic surgery has become widely used in oncologic surgery, analysis of safety is lacking in comparison to traditional techniques. Standardized assessment of robotic surgical outcomes and adverse events following oncologic surgery is necessary for quality improvement with innovative technology. Between 2003 and 2016, 10,013 unique robotic operations were performed in 9,858 patients. Our prospectively maintained database was retrospectively reviewed for hospital readmissions and Clavien-Dindo grade ≥ 2 complications within 30 days. Multivariable logistic regression was used to identify predictors of surgical complications and hospital readmissions. Cases were stratified by discipline: genitourinary (n = 8240), gynecologic (n = 857), thoracic (n = 457), gastrointestinal (n = 322), hepatobiliary (n = 60), ear/nose/throat (n = 44) and general (n = 33). Intraoperative complications occurred in 42 surgeries (0.4%). Postoperative complications occurred in 946 patients [9.4%, highest grade 2 (n = 574), 3 (n = 288), 4 (n = 72), 5 (n = 10)]. Most frequent complications were ileus (154, 16.3%), anemia (91, 9.6%), cardiac arrhythmia (62, 6.6%), deep vein thrombosis/pulmonary embolus (47, 5.0%), wound infection (45, 4.8%) and urinary leak (43, 4.5%). 405 patients (4.0%) required readmission. Most common causes for hospital readmission were ileus (44, 10.9%), urinary leak (23, 5.7%), urinary tract infection (23, 5.7%), intra-abdominal abscess/fluid collection (23, 5.7%), and small bowel obstruction (19, 4.7%). On multivariable analysis, longer operative time and older age predicted complications and readmissions (p ≤ 0.02). Robotic-assisted surgery appears a safe for oncologic surgery with acceptable hospital readmission and complication rates. Older age and longer operative time were associated with complications and readmission.


Subject(s)
Comprehensive Health Care/statistics & numerical data , Intraoperative Complications/epidemiology , Intraoperative Complications/etiology , Neoplasms/surgery , Oncology Service, Hospital/statistics & numerical data , Patient Readmission/statistics & numerical data , Postoperative Complications/epidemiology , Postoperative Complications/etiology , Robotic Surgical Procedures/adverse effects , Robotic Surgical Procedures/statistics & numerical data , Aged , Anemia/epidemiology , Anemia/etiology , Arrhythmias, Cardiac/epidemiology , Arrhythmias, Cardiac/etiology , Databases as Topic , Female , Humans , Ileus/epidemiology , Ileus/etiology , Male , Pulmonary Embolism/epidemiology , Pulmonary Embolism/etiology , Quality Improvement , Quality of Health Care , Retrospective Studies , Surgical Wound Infection/epidemiology , Surgical Wound Infection/etiology , Treatment Outcome , Venous Thrombosis/epidemiology , Venous Thrombosis/etiology
10.
PLoS Biol ; 18(10): e3000829, 2020 10.
Article in English | MEDLINE | ID: mdl-33048920

ABSTRACT

Task-related activity in the ventral thalamus, a major target of basal ganglia output, is often assumed to be permitted or triggered by changes in basal ganglia activity through gating- or rebound-like mechanisms. To test those hypotheses, we sampled single-unit activity from connected basal ganglia output and thalamic nuclei (globus pallidus-internus [GPi] and ventrolateral anterior nucleus [VLa]) in monkeys performing a reaching task. Rate increases were the most common peri-movement change in both nuclei. Moreover, peri-movement changes generally began earlier in VLa than in GPi. Simultaneously recorded GPi-VLa pairs rarely showed short-time-scale spike-to-spike correlations or slow across-trials covariations, and both were equally positive and negative. Finally, spontaneous GPi bursts and pauses were both followed by small, slow reductions in VLa rate. These results appear incompatible with standard gating and rebound models. Still, gating or rebound may be possible in other physiological situations: simulations show how GPi-VLa communication can scale with GPi synchrony and GPi-to-VLa convergence, illuminating how synchrony of basal ganglia output during motor learning or in pathological conditions may render this pathway effective. Thus, in the healthy state, basal ganglia-thalamic communication during learned movement is more subtle than expected, with changes in firing rates possibly being dominated by a common external source.


Subject(s)
Action Potentials/physiology , Basal Ganglia/physiology , Task Performance and Analysis , Thalamus/physiology , Animals , Brain Mapping , Computer Simulation , Databases as Topic , Female , Globus Pallidus/physiology , Macaca , Microelectrodes , Movement , Neurons/physiology , Reaction Time/physiology , Rest/physiology , Ventral Thalamic Nuclei/physiology
11.
Mol Inform ; 39(11): e2000163, 2020 11.
Article in English | MEDLINE | ID: mdl-32964659

ABSTRACT

Medicinal plants have widely been used in the traditional treatment of ailments and have been proven effective. Their contribution still holds an important place in modern drug discovery due to their chemical, and biological diversities. However, the poor documentation of traditional medicine, in developing African countries for instance, can lead to the loss of knowledge related to such practices. In this study, we present the Eastern Africa Natural Products Database (EANPDB) containing the structural and bioactivity information of 1870 unique molecules isolated from about 300 source species from the Eastern African region. This represents the largest collection of natural products (NPs) from this geographical region, covering literature data of the period from 1962 to 2019. The computed physicochemical properties and toxicity profiles of each compound have been included. A comparative analysis of some physico-chemical properties like molecular weight, H-bond donor/acceptor, logPo/w , etc. as well scaffold diversity analysis has been carried out with other published NP databases. EANPDB was combined with the previously published Northern African Natural Products Database (NANPDB), to form a merger African Natural Products Database (ANPDB), containing ∼6500 unique molecules isolated from about 1000 source species (freely available at http://african-compounds.org). As a case study, latrunculins A and B isolated from the sponge Negombata magnifica (Podospongiidae) with previously reported antitumour activities, were identified via substructure searching as molecules to be explored as putative binders of histone deacetylases (HDACs).


Subject(s)
Biological Products/pharmacology , Plants, Medicinal/chemistry , Africa, Eastern , Biological Products/chemistry , Bridged Bicyclo Compounds, Heterocyclic/chemistry , Databases as Topic , Histone Deacetylase Inhibitors/chemistry , Hydrogen Bonding , Molecular Weight , Thiazolidines/chemistry , Toxicity Tests
12.
Medicine (Baltimore) ; 99(34): e21877, 2020 Aug 21.
Article in English | MEDLINE | ID: mdl-32846845

ABSTRACT

BACKGROUND: Chinese herbal medicine (CHM) has been widely used to treat knee osteoarthritis (KOA), among which Yanghe decoction (YHD) is one of the commonly used prescriptions. The purpose of this study is to evaluate the effectiveness and safety of YHD in the treatment of KOA. METHODS: Six databases, including Embase, PubMed, the Cochrane Library, the China National Knowledge Infrastructure, Wanfang Database and Chinese Science and Technology Periodical Database will be searched from their inception to July 2020. Two researchers will independently select studies, collect data and evaluate the quality of included studies. Statistical analysis will be processed by RevMan V.5.3 software. RESULTS: This study will provide an assessment of the current state of YHD in the treatment of KOA, aiming to show the efficacy and safety of YHD. CONCLUSION: This study will provide evidence to judge whether YHD is an effective intervention for KOA.


Subject(s)
Drugs, Chinese Herbal/therapeutic use , Osteoarthritis, Knee/therapy , China/epidemiology , Databases as Topic , Drugs, Chinese Herbal/adverse effects , Female , Humans , Male , Safety , Treatment Outcome , Meta-Analysis as Topic
13.
Medicine (Baltimore) ; 99(31): e21450, 2020 Jul 31.
Article in English | MEDLINE | ID: mdl-32756165

ABSTRACT

BACKGROUND: Ankylosing spondylitis (AS) is a common progressive autoimmune inflammatory disease. Du moxibustion can effectively treat AS with few adverse reactions. The aim of this protocol is to systematically investigate the effectiveness and safety for management of AS with Du moxibustion. METHODS: Seven relevant databases, namely, PubMed, Cochrane Library, Embase, Chinese Biomedical Literatures Database (CBM), China National Knowledge Infrastructure (CNKI), WangFang Database (WF), Chinese Scientific Journal Database (VIP) will be searched from their inception until May 1st, 2020. All clinical randomized controlled trials containing eligible interventions(s) and outcome(s) will be included, regardless of blinding or publication types. Two reviewers will independently retrieval databases, extract data, and then assess the quality of studies. Data synthesis will be conducted by RevMan 5.3 software. We regard the effective rate, Bath Ankylosing Spondylitis Disease Activity Index (BASDAI), Visual Analogue Scale (VAS) as the primary outcomes, and the secondary outcomes contain C-reactive protein (CRP), erythrocyte sedimentation rate (ESR), finger-to-floor distance (FFD), occiput to wall distance (OWD), and side effects. The result about the curative effect and safety of Du moxibustion for AS will be presented as risk ratio for dichotomous data and mean differences with a 95% confidence interval for continuous data. RESULTS: The finding will be presented in a journal or related conferences. CONCLUSIONS: This study expects to provide high-quality, evidence-based recommendations on further treatment for clinical guidance. PROSPERO REGISTRATION NUMBER: CRD42020158727.


Subject(s)
Moxibustion/methods , Spondylitis, Ankylosing/blood , Spondylitis, Ankylosing/therapy , Blood Sedimentation , C-Reactive Protein/analysis , Databases as Topic , Humans , Moxibustion/adverse effects , Prevalence , Randomized Controlled Trials as Topic , Spondylitis, Ankylosing/epidemiology , Treatment Outcome , Visual Analog Scale , Meta-Analysis as Topic
14.
Nutrients ; 12(5)2020 Apr 30.
Article in English | MEDLINE | ID: mdl-32365850

ABSTRACT

Necrotizing Enterocolitis (NEC) is associated with prematurity, enteral feedings, and enteral dysbiosis. Accordingly, we hypothesized that along with nutritional variability, metabolic dysfunction would be associated with NEC onset. Methods: We queried a multicenter longitudinal database that included 995 preterm infants (<32 weeks gestation) and included 73 cases of NEC. Dried blood spot samples were obtained on day of life 1, 7, 28, and 42. Metabolite data from each time point included 72 amino acid (AA) and acylcarnitine (AC) measures. Nutrition data were averaged at each of the same time points. Odds ratios and 95% confidence intervals were calculated using samples obtained prior to NEC diagnosis and adjusted for potential confounding variables. Nutritional and metabolic data were plotted longitudinally to determine relationship to NEC onset. Results: Day 1 analyte levels of alanine, phenylalanine, free carnitine, C16, arginine, C14:1/C16, and citrulline/phenylalanine were associated with the subsequent development of NEC. Over time, differences in individual analyte levels associated with NEC onset shifted from predominantly AAs at birth to predominantly ACs by day 42. Subjects who developed NEC received significantly lower weight-adjusted total calories (p < 0.001) overall, a trend that emerged by day of life 7 (p = 0.020), and persisted until day of life 28 (p < 0.001) and 42 (p < 0.001). Conclusion: Premature infants demonstrate metabolic differences at birth. Metabolite abnormalities progress in parallel to significant differences in nutritional delivery signifying metabolic dysfunction in premature newborns prior to NEC onset. These observations provide new insights to potential contributing pathophysiology of NEC and opportunity for clinical care-based prevention.


Subject(s)
Amino Acids/metabolism , Enterocolitis, Necrotizing/etiology , Infant Nutritional Physiological Phenomena/physiology , Infant, Premature/metabolism , Metabolic Diseases/etiology , Nutrition Disorders/etiology , Nutritional Status , Data Analysis , Databases as Topic , Enterocolitis, Necrotizing/prevention & control , Female , Humans , Infant, Newborn , Longitudinal Studies , Male , Metabolic Diseases/metabolism , Multicenter Studies as Topic , Nutrition Disorders/metabolism
15.
Proc Natl Acad Sci U S A ; 116(27): 13661-13669, 2019 07 02.
Article in English | MEDLINE | ID: mdl-31213544

ABSTRACT

The thalamus is 1 of 4 major divisions of the forebrain and is usually subdivided into epithalamus, dorsal thalamus, and ventral thalamus. The 39 gray matter regions comprising the large dorsal thalamus project topographically to the cerebral cortex, whereas the much smaller epithalamus (2 regions) and ventral thalamus (5 regions) characteristically project subcortically. Before analyzing extrinsic inputs and outputs of the thalamus, here, the intrinsic connections among all 46 gray matter regions of the rat thalamus on each side of the brain were expertly collated and subjected to network analysis. Experimental axonal pathway-tracing evidence was found in the neuroanatomical literature for the presence or absence of 99% of 2,070 possible ipsilateral connections and 97% of 2,116 possible contralateral connections; the connection density of ipsilateral connections was 17%, and that of contralateral connections 5%. One hub, the reticular thalamic nucleus (of the ventral thalamus), was found in this network, whereas no high-degree rich club or clear small-world features were detected. The reticular thalamic nucleus was found to be primarily responsible for conferring the property of complete connectedness to the intrathalamic network in the sense that there is, at least, one path of finite length between any 2 regions or nodes in the network. Direct comparison with previous investigations using the same methodology shows that each division of the forebrain (cerebral cortex, cerebral nuclei, thalamus, hypothalamus) has distinct intrinsic network topological organization. A future goal is to analyze the network organization of connections within and among these 4 divisions of the forebrain.


Subject(s)
Neural Pathways/anatomy & histology , Prosencephalon/anatomy & histology , Thalamic Nuclei/anatomy & histology , Thalamus/anatomy & histology , Animals , Databases as Topic , Female , Male , Neural Pathways/physiology , Prosencephalon/physiology , Rats , Thalamic Nuclei/physiology , Thalamus/physiology
16.
Molecules ; 24(9)2019 May 09.
Article in English | MEDLINE | ID: mdl-31075972

ABSTRACT

Calibration transfer is an important field for near-infrared (NIR) spectroscopy in practical applications. However, most transfer methods are constructed with standard samples, which are expensive and difficult to obtain. Taking this problem into account, this paper proposes a calibration transfer method based on affine invariance without transfer standards (CTAI). Our method can be utilized to adjust the difference between two instruments by affine transformation. CTAI firstly establishes a partial least squares (PLS) model of the master instrument to obtain score matrices and predicted values of the two instruments, and then the regression coefficients between each of the score vectors and predicted values are computed for the master instrument and the slave instrument, respectively. Next, angles and biases are calculated between the regression coefficients of the master instrument and the corresponding regression coefficients of the slave instrument, respectively. Finally, by introducing affine transformation, new samples are predicted based on the obtained angles and biases. A comparative study between CTAI and the other five methods was conducted, and the performances of these algorithms were tested with two NIR spectral datasets. The obtained experimental results show clearly that, in general CTAI is more robust and can also achieve the best Root Mean Square Error of test sets (RMSEPs). In addition, the results of statistical difference with the Wilcoxon signed rank test show that CTAI is generally better than the others, and at least statistically the same.


Subject(s)
Spectroscopy, Near-Infrared/methods , Calibration , Databases as Topic , Humidity , Least-Squares Analysis , Plant Oils/analysis , Plant Proteins/analysis , Reference Standards , Triticum/chemistry , Zea mays/chemistry
17.
Eur J Epidemiol ; 34(4): 423-437, 2019 Apr.
Article in English | MEDLINE | ID: mdl-30929112

ABSTRACT

Education, income, and occupation are factors known to affect health and disease. In this review we describe the Swedish Longitudinal Integrated Database for Health Insurance and Labour Market Studies (LISA, Longitudinell Integrationsdatabas för Sjukförsäkrings- och Arbetsmarknadsstudier). LISA covers the adult Swedish population aged ≥ 16 years registered on December 31 each year since 1990 (since 2010 individuals aged ≥ 15 years). The database was launched in response to rising levels of sick leave in the country. Participation in Swedish government-administered registers such as LISA is compulsory, and hence selection bias is minimized. The LISA database allows researchers to identify individuals who do not work because of injury, disease, or rehabilitation. It contains data on sick leave and disability pension based on calendar year. LISA also includes information on unemployment benefits, disposable income, social welfare payments, civil status, and migration. During 2000-2017, an average of 97,000 individuals immigrated to Sweden each year. This corresponds to about 1% of the Swedish population (10 million people in 2017). Data on occupation have a completeness of 95%. Income data consist primarily of income from employment, capital, and allowances, including parental allowance. In Sweden, work force participation is around 80% (2017: overall: 79.1%; men 80.3% and women 77.9%). Education data are available in > 98% of all individuals aged 25-64 years, with an estimated accuracy for highest attained level of education of 85%. Some information on civil status, income, education, and employment before 1990 can be obtained through the Population and Housing Census data (FoB, Folk- och bostadsräkningen).


Subject(s)
Biomedical Research , Databases as Topic , Employment/statistics & numerical data , Insurance, Health , Humans , Sweden
18.
Molecules ; 24(8)2019 Apr 18.
Article in English | MEDLINE | ID: mdl-31003405

ABSTRACT

High-accuracy and fast detection of nutritive elements in traditional Chinese medicine Panax notoginseng (PN) is beneficial for providing useful assessment of the healthy alimentation and pharmaceutical value of PN herbs. Laser-induced breakdown spectroscopy (LIBS) was applied for high-accuracy and fast quantitative detection of six nutritive elements in PN samples from eight producing areas. More than 20,000 LIBS spectral variables were obtained to show elemental differences in PN samples. Univariate and multivariate calibrations were used to analyze the quantitative relationship between spectral variables and elements. Multivariate calibration based on full spectra and selected variables by the least absolute shrinkage and selection operator (Lasso) weights was used to compare the prediction ability of the partial least-squares regression (PLS), least-squares support vector machines (LS-SVM), and Lasso models. More than 90 emission lines for elements in PN were found and located. Univariate analysis was negatively interfered by matrix effects. For potassium, calcium, magnesium, zinc, and boron, LS-SVM models based on the selected variables obtained the best prediction performance with Rp values of 0.9546, 0.9176, 0.9412, 0.9665, and 0.9569 and root mean squared error of prediction (RMSEP) of 0.7704 mg/g, 0.0712 mg/g, 0.1000 mg/g, 0.0012 mg/g, and 0.0008 mg/g, respectively. For iron, the Lasso model based on full spectra obtained the best result with an Rp value of 0.9348 and RMSEP of 0.0726 mg/g. The results indicated that the LIBS technique coupled with proper multivariate chemometrics could be an accurate and fast method in the determination of PN nutritive elements for traditional Chinese medicine management and pharmaceutical analysis.


Subject(s)
Elements , Lasers , Panax notoginseng/chemistry , Spectrum Analysis/methods , Support Vector Machine , Databases as Topic , Least-Squares Analysis , Multivariate Analysis , Reference Standards
19.
J Cancer Res Clin Oncol ; 145(3): 775-780, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30656408

ABSTRACT

PURPOSE: To estimate the effect of metabolic syndrome (MetS) on the prevalence of prostate cancer using a large retrospective cohort with a 5-year follow-up duration. METHODS: National Health Insurance Service health checkup cohort was used for the study. In total, 130,342 men included in the health checkup cohort in 2009 were divided into two groups according to the presence of prostate cancer. The prevalence of prostate cancer from 2009 to 2013 was cumulatively calculated from 2003. A generalized estimating equation was used to assess the effect of MetS and its component on the prevalence of prostate cancer after adjusting for other variables. RESULTS: Prostate cancer was present in 2369 men (1.8%) in 2009. The prevalence of prostate cancer was significantly higher in patients with MetS than in those without MetS throughout the entire follow-up duration. Multivariable analysis showed that in addition to year at evaluation and age, the presence of MetS was associated with an increased prevalence of prostate cancer. Alcohol consumption and smoking levels were negatively associated with the prevalence of prostate cancer. Among MetS components, decreased high density lipoprotein (HDL)-cholesterolemia and central obesity were associated with an increased prevalence of prostate cancer after adjusting for other variables. CONCLUSION: MetS and its components, especially decreased HDL-cholesterol levels and central obesity, were related to the increased prevalence of prostate cancer. Preventing MetS, maintaining high HDL-cholesterol level, and maintaining low waist circumference might be useful ways for decreasing the prevalence of prostate cancer.


Subject(s)
Metabolic Syndrome/epidemiology , Prostatic Neoplasms/epidemiology , Adult , Aged , Cohort Studies , Databases as Topic , Humans , Male , Middle Aged , National Health Programs , Prevalence , Republic of Korea/epidemiology
20.
J Biomol Struct Dyn ; 37(3): 649-670, 2019 Feb.
Article in English | MEDLINE | ID: mdl-29380672

ABSTRACT

The dual-target inhibitors tend to improve the response rate in treating tumors, comparing with the single-target inhibitors. Matrix metalloproteinase-2 (MMP-2) and histone deacetylase-6 (HDAC-6) are attractive targets for cancer therapy. In this study, the hierarchical virtual screening of dual MMP-2/HDAC-6 inhibitors from natural products is investigated. The pharmacophore model of MMP-2 inhibitors is built based on ligands, but the pharmacophore model of HDAC-6 inhibitors is built based on the experimental crystal structures of multiple receptor-ligand complexes. The reliability of these two pharmacophore models is validated subsequently. The hierarchical virtual screening, combining these two different pharmacophore models of MMP-2 and HDAC-6 inhibitors with molecular docking, is carried out to identify the dual MMP-2/HDAC-6 inhibitors from a database of natural products. The four potential dual MMP-2/HDAC-6 inhibitors of natural products, STOCK1 N-46177, STOCK1 N-52245, STOCK1 N-55477, and STOCK1 N-69706, are found. The studies of binding modes show that the screened four natural products can simultaneously well bind with the MMP-2 and HDAC-6 active sites by different kinds of interactions, to inhibit the MMP-2 and HDAC-6 activities. In addition, the ADMET properties of screened four natural products are assessed. These found dual MMP-2/HDAC-6 inhibitors of natural products could serve as the lead compounds for designing the new dual MMP-2/HDAC-6 inhibitors having higher biological activities by carrying out structural modifications and optimizations in the future studies.


Subject(s)
Biological Products/analysis , Drug Evaluation, Preclinical , Histone Deacetylase 6/antagonists & inhibitors , Histone Deacetylase Inhibitors/analysis , Matrix Metalloproteinase 2/metabolism , Matrix Metalloproteinase Inhibitors/analysis , Molecular Docking Simulation , User-Computer Interface , Binding Sites , Databases as Topic , Histone Deacetylase Inhibitors/chemistry , Inhibitory Concentration 50 , Ligands , Matrix Metalloproteinase Inhibitors/chemistry , ROC Curve , Reproducibility of Results
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