Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 18 de 18
Filter
1.
Sci Rep ; 11(1): 21726, 2021 11 05.
Article in English | MEDLINE | ID: mdl-34741111

ABSTRACT

Cryptotanshinone (CT) is an extract from the traditional Chinese medicine Salvia miltiorrhiza, which inhibits the growth of methicillin-resistant Staphylococcus aureus (MRSA) in vitro. This study aims to determine the antibacterial mechanisms of CT by integrating bioinformatics analysis and microbiology assay. The microarray data of GSE13203 was retrieved from the Gene Expression Omnibus (GEO) database to screen the differentially expressed genes (DEGs) of S. aureus strains that were treated with CT treatment. Gene ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were used to identify the potential target of CT. Data mining on the microarray dataset indicated that pyruvate kinase (PK) might be involved in the antimicrobial activities of CT. The minimum inhibition concentrations (MICs) of CT or vancomycin against the MRSA strain ATCC43300 and seven other clinical strains were determined using the broth dilution method. The effects of CT on the activity of PK were further measured. In vitro tests verified that CT inhibited the growth of an MRSA reference strain and seven other clinical strains. CT hampered the activity of the PK of ATCC43300 and five clinical MRSA strains. CT might hinder bacterial energy metabolism by inhibiting the activity of PK.


Subject(s)
Methicillin-Resistant Staphylococcus aureus/drug effects , Phenanthrenes/pharmacology , Pyruvate Kinase/antagonists & inhibitors , Computational Biology , Drugs, Chinese Herbal/pharmacology , Drugs, Chinese Herbal/therapeutic use , Gene Expression Profiling , Humans , Methicillin-Resistant Staphylococcus aureus/enzymology , Phenanthrenes/therapeutic use , Phytotherapy , Staphylococcal Infections/drug therapy
2.
Discov Med ; 29(156): 65-77, 2020.
Article in English | MEDLINE | ID: mdl-32598864

ABSTRACT

Staphylococcus aureus can cause both acute and recurrent persistent infections such as peritonitis, endocarditis, abscesses, osteomyelitis, and chronic wound infections. Effective therapies to treat persistent disease are paramount. However, the mechanisms of S. aureus persistence are poorly understood. In this study, we performed a comprehensive and unbiased high-throughput mutant screen against a transposon-insertion mutant library of S. aureus USA300 and focused on the role of argJ encoding an acetyltransferase in the arginine biosynthesis pathway, whose transposon insertion caused a significant defect in persister formation using multiple drugs and stresses. Genetic complementation and arginine supplementation restored persistence in the argJ transposon insertion mutant while generation of mutations on the active site of the ArgJ protein caused a defect in persistence. Quantitative RT-PCR analysis showed that the genes encoded in the arg operon were over-expressed under drug stressed conditions and in stationary phase cultures. In addition, the argJ mutant had attenuated virulence in both mouse and C. elegans. Our studies identify a new mechanism of persistence mediated by arginine metabolism in S. aureus. These findings provide not only novel insights about the mechanisms of S. aureus persistence but also offer novel therapeutic targets that may help to develop more effective treatment of persistent S. aureus infections.


Subject(s)
Acetyltransferases/genetics , Bacterial Proteins/genetics , Methicillin-Resistant Staphylococcus aureus/pathogenicity , Staphylococcal Infections/microbiology , Virulence Factors/genetics , Acetyltransferases/metabolism , Animals , Anti-Bacterial Agents/pharmacology , Arginine/biosynthesis , Bacterial Proteins/metabolism , Biosynthetic Pathways/genetics , Caenorhabditis elegans , DNA Transposable Elements/genetics , Disease Models, Animal , Drug Resistance, Bacterial/drug effects , Drug Resistance, Bacterial/genetics , Female , Gene Library , Genes, Bacterial/drug effects , High-Throughput Screening Assays , Humans , Methicillin-Resistant Staphylococcus aureus/enzymology , Methicillin-Resistant Staphylococcus aureus/genetics , Mice , Mutation/drug effects , Virulence/drug effects , Virulence/genetics , Virulence Factors/metabolism
3.
Article in English | MEDLINE | ID: mdl-31953996

ABSTRACT

Background PBP2a is a type of penicillin-binding proteins (PBPs) that cause resistivity in methicillin-resistant Staphylococcus aureus (MRSA) from ß-lactam antibiotics. MRSA susceptible with cefttobiprole (fifth generation of cephalosporin as an anti-MRSA agent) which inhibits PBP2a and stops its growth. Contrary to its efficacy, ceftobiprole causes taste disturbance more than any other cephalosporins; furthermore, its mechanism is unknown. This study aims to explore an in silico study of a natural compound, which serves as a potential alternative to overcome MRSA with minimum adverse side effects. Methods A molecular docking study was performed using Molegro Virtual Docker version 5.5. Brazilin and proto-sappanins A-E are phytochemical compounds contained in sappan wood extract and are docked into the binding site of PBP2a (Protein Data Bank: ID 4DKI). Results Brazilin and proto-sappanins A-E have some interaction with Ser 403 amino acid residue which is an important interaction to inhibit PBP2a protein. The result of the molecular docking study showed that the MolDock score of proto-sappanins D and E is lower than that of methicillin but higher than that of its native ligand (ceftobiprole). Conclusions The results of this study suggest that proto-sappanins D and E have an excellent potential activity as an alternative to ceftobiprole in limiting MRSA growth through PBP2A enzyme inhibition.


Subject(s)
Bacterial Proteins/antagonists & inhibitors , Methicillin-Resistant Staphylococcus aureus/drug effects , Molecular Docking Simulation , Penicillin-Binding Proteins/antagonists & inhibitors , Phytochemicals/pharmacology , Plant Extracts/pharmacology , Staphylococcal Infections/drug therapy , Wood/chemistry , Anti-Bacterial Agents/pharmacology , Computer Simulation , Humans , Methicillin-Resistant Staphylococcus aureus/enzymology , Staphylococcal Infections/microbiology , Staphylococcal Infections/pathology
4.
Assay Drug Dev Technol ; 17(7): 298-309, 2019 10.
Article in English | MEDLINE | ID: mdl-31634019

ABSTRACT

Multidrug resistance (MDR) is a major health issue for the treatment of infectious diseases throughout the world. Staphylococcus aureus (S. aureus) is a Gram-positive bacteria, responsible for various local and systemic infections in humans. The continuous and abrupt use of antibiotics against bacteria such as S. aureus results in the development of resistant strains. Presently, mupirocin (MUP) is the drug of choice against S. aureus and MDR (methicillin-resistant). However, S. aureus has acquired resistance against MUP as well due to isoleucyl-tRNA synthetase (IleS) mutation at sites 588 and 631. Thus, the aim of the present study was to discover novel bioactives against MUP-resistant S. aureus using in silico drug repurposing approaches. In silico drug repurposing techniques were used to obtain suitable bioactive lead molecules such as buclizine, tasosartan, emetine, medrysone, and so on. These lead molecules might be able to resolve this issue. These leads were obtained through molecular docking simulation based virtual screening, which could be promising for the treatment of MUP-resistant S. aureus. The findings of the present work need to be validated further through in vitro and in vivo studies for their clinical application.


Subject(s)
Anti-Bacterial Agents/pharmacology , Drug Repositioning , Drug Resistance, Bacterial/drug effects , Methicillin-Resistant Staphylococcus aureus/drug effects , Molecular Docking Simulation , Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/chemistry , Emetine/chemical synthesis , Emetine/chemistry , Emetine/pharmacology , Humans , Isoleucine-tRNA Ligase/antagonists & inhibitors , Isoleucine-tRNA Ligase/metabolism , Methicillin-Resistant Staphylococcus aureus/enzymology , Microbial Sensitivity Tests , Piperazines/chemical synthesis , Piperazines/chemistry , Piperazines/pharmacology , Pregnenediones/chemical synthesis , Pregnenediones/chemistry , Pregnenediones/pharmacology , Pyrimidines/chemical synthesis , Pyrimidines/chemistry , Pyrimidines/pharmacology , Tetrazoles/chemical synthesis , Tetrazoles/chemistry , Tetrazoles/pharmacology
5.
Molecules ; 22(12)2017 Dec 16.
Article in English | MEDLINE | ID: mdl-29258194

ABSTRACT

Combining antibiotics with resistance reversing agents is a key strategy to overcome bacterial resistance. Upon screening antimicrobial activities of plants used in traditional medicine, we found that a leaf dichloromethane extract from the shea butter tree (Vitellaria paradoxa) had antimicrobial activity against methicillin-resistant Staphylococcus aureus (MRSA) with further evidence of synergy when combined with ß-lactams. Using HPLC-MS, we identified ursolic (UA) and oleanolic acids (OA) in leaves and twigs of this species, and quantified them by HPLC-UV as the major constituents in leaf extracts (21% and 6% respectively). Both pure triterpenic acids showed antimicrobial activity against reference and clinical strains of MRSA, with MICs ranging from 8-16 mg/L for UA to 32-128 mg/L for OA. They were highly synergistic with ß-lactams (ampicillin and oxacillin) at subMIC concentrations. Reversion of MRSA phenotype was attributed to their capacity to delocalize PBP2 from the septal division site, as observed by fluorescence microscopy, and to disturb thereby peptidoglycan synthesis. Moreover, both compounds also inhibited ß-lactamases activity of living bacteria (as assessed by inhibition of nitrocefin hydrolysis), but not in bacterial lysates, suggesting an indirect mechanism for this inhibition. In a murine model of subcutaneous MRSA infection, local administration of UA was synergistic with nafcillin to reduce lesion size and inflammatory cytokine (IL-1ß) production. Thus, these data highlight the potential interest of triterpenic acids as resistance reversing agents in combination with ß-lactams against MRSA.


Subject(s)
Anti-Bacterial Agents/pharmacology , Methicillin-Resistant Staphylococcus aureus/drug effects , Plant Extracts/pharmacology , Animals , Anti-Bacterial Agents/isolation & purification , Anti-Bacterial Agents/therapeutic use , Bacterial Proteins/metabolism , Drug Resistance, Bacterial , Drug Synergism , Ericales/chemistry , Female , Hydrolysis , Methicillin-Resistant Staphylococcus aureus/enzymology , Mice, Inbred C57BL , Microbial Sensitivity Tests , Oleanolic Acid , Plant Extracts/isolation & purification , Plant Extracts/therapeutic use , Plant Leaves/chemistry , Staphylococcal Infections/drug therapy , Staphylococcal Infections/microbiology , Triterpenes , beta-Lactamases/metabolism , beta-Lactams/pharmacology , Ursolic Acid
6.
J Med Chem ; 59(10): 4831-48, 2016 05 26.
Article in English | MEDLINE | ID: mdl-27139780

ABSTRACT

Antivirulence strategies are now attracting interest for the inherent mechanism of action advantages. In our previous work, diapophytoene desaturase (CrtN) was identified to be an attractive and drugable target for fighting pigmented S. aureus infections. In this research, we developed a series of effective benzocycloalkane-derived CrtN inhibitors with submicromolar IC50. Analogue 8 blocked the pigment biosynthesis of three MRSA strains with a nanomolar IC50 value. Corresponding to its mode of action, 8 did not function as a bactericidal agent. 8 could sensitize S. aureus to immune clearance. In vivo, 8 was proven to be efficacious in an S. aureus Newman sepsis model and abscess formation model. For two typical MRSAs, USA400 MW2 and Mu50, 8 significantly decreased the staphylococcal loads in the liver and kidneys. Moreover, 8 showed minimal antifungal activity compared to that of NTF. In summary, 8 has the potential to be developed as a therapeutic drug, especially against intractable MRSA issues.


Subject(s)
Alkanes/pharmacology , Anti-Bacterial Agents/pharmacology , Drug Discovery , Enzyme Inhibitors/pharmacology , Methicillin-Resistant Staphylococcus aureus/drug effects , Oxidoreductases/antagonists & inhibitors , Staphylococcal Infections/drug therapy , Alkanes/chemical synthesis , Alkanes/chemistry , Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/chemistry , Antifungal Agents/chemical synthesis , Antifungal Agents/chemistry , Antifungal Agents/pharmacology , Dose-Response Relationship, Drug , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/chemistry , Fungi/drug effects , Methicillin-Resistant Staphylococcus aureus/enzymology , Methicillin-Resistant Staphylococcus aureus/growth & development , Microbial Sensitivity Tests , Molecular Structure , Oxidoreductases/metabolism , Structure-Activity Relationship
7.
Bioorg Med Chem ; 23(21): 7061-8, 2015 Nov 01.
Article in English | MEDLINE | ID: mdl-26432604

ABSTRACT

Due to the emergence and rapid spread of drug resistance in bacteria, there is an urgent need for the development of novel antimicrobials. SecA, a key component of the general bacterial secretion system required for viability and virulence, is an attractive antimicrobial target. Earlier we reported that systematical dissection of a SecA inhibitor, Rose Bengal (RB), led to the development of novel small molecule SecA inhibitors active against Escherichia coli and Bacillus subtilis. In this study, two potent RB analogs were further evaluated for activities against methicillin-resistant Staphylococcus aureus (MRSA) strains and for their mechanism of actions. These analogs showed inhibition on the ATPase activities of S. aureus SecA1 (SaSecA1) and SecA2 (SaSecA2), and inhibition of SaSecA1-dependent protein-conducting channel. Moreover, these inhibitors reduce the secretion of three toxins from S. aureus and exert potent bacteriostatic effects against three MRSA strains. Our best inhibitor SCA-50 showed potent concentration-dependent bactericidal activity against MRSA Mu50 strain and very importantly, 2-60 fold more potent inhibitory effect on MRSA Mu50 than all the commonly used antibiotics including vancomycin, which is considered the last resort option in treating MRSA-related infections. Protein pull down experiments further confirmed SaSecA1 as a target. Deletion or overexpression of NorA and MepA efflux pumps had minimal effect on the antimicrobial activities against S. aureus, indicating that the effects of SecA inhibitors were not affected by the presence of these efflux pumps. Our studies show that these small molecule analogs target SecA functions, have potent antimicrobial activities, reduce the secretion of toxins, and have the ability to overcome the effect efflux pumps, which are responsible for multi-drug resistance. Thus, targeting SecA is an attractive antimicrobial strategy against MRSA.


Subject(s)
Adenosine Triphosphatases/antagonists & inhibitors , Anti-Infective Agents/chemistry , Bacterial Proteins/antagonists & inhibitors , Methicillin-Resistant Staphylococcus aureus/enzymology , Rose Bengal/chemistry , Adenosine Triphosphatases/metabolism , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Anti-Infective Agents/pharmacology , Bacterial Proteins/metabolism , Binding Sites , Drug Evaluation, Preclinical , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Kinetics , Light , Membrane Transport Proteins/metabolism , Methicillin-Resistant Staphylococcus aureus/drug effects , Microbial Sensitivity Tests , Molecular Docking Simulation , Oxidation-Reduction , Protein Structure, Tertiary , Rose Bengal/pharmacology , SEC Translocation Channels , SecA Proteins , Staphylococcus aureus/drug effects
8.
PLoS One ; 10(7): e0131178, 2015.
Article in English | MEDLINE | ID: mdl-26132199

ABSTRACT

A simple and rapid microwave assisted method of green synthesis of silver nanoparticles (AgNPs) was developed using aqueous leaf extract of Eucalyptus globulus(ELE), and their antibacterial and antibiofilm potential investigated. With this aim, the aqueous solutions of ELE and AgNO3(1 mM) were mixed (1:4 v/v), and microwave irradiated at 2450 Mhz, for 30 sec. The instant color change of the ELE-AgNO3 mixture from pale yellow to dark brown indicated ELE-AgNPs synthesis. The intensity of peak at 428 nm in UV-Vis spectra, due to the surface plasmon resonance of AgNPs, varied with the amount of ELE, AgNO3 concentration, pH and time of incubation. The biosynthesized ELE-AgNPs were characterized by UV-visible spectroscopy, XRD, TEM, SEM-EDX, FTIR and TGA analyses. The size of ELE-AgNPs was determined to be in range of 1.9-4.3 nm and 5-25 nm, with and without microwave treatment, respectively. SEM exhibited the capping of AgNPs with the ELE constituents, and validated by FTIR analysis. The FTIR data revealed the presence of plant organic constituents and metabolites bound to ELE-AgNPs, which contributes for their stability. The antimicrobial activity of ELE-AgNPs was assessed by growth and biofilm inhibition of extended spectrum ß-lactamase (ESBL) producing Pseudomonas aeruginosa, Escherichia coli and methicillin-resistant Staphylococcus aureus (MRSA) and methicillin-sensitive Staphylococcus aureus (MSSA) clinical bacterial isolates. The results demonstrated that S. aureus were more sensitive to ELE-AgNPs than E. coli and P. aeruginosa. MRSA exhibited higher sensitive than MSSA, whereas P. aeruginosa were more sensitive than E. coli to ELE-AgNPs treatment. Also, significant (83 ± 3% and 84 ± 5%) biofilm inhibition was observed in case of S. aureus and P. aeruginosa, respectively. The results elucidated environmentally friendly, economical and quick method for production of colloidal bio-functionalized ELE-AgNPs, for effectual clinical applications, as broad spectrum antibacterial agents and biofilm inhibitors.


Subject(s)
Anti-Bacterial Agents/pharmacology , Biofilms/drug effects , Escherichia coli/drug effects , Eucalyptus/chemistry , Metal Nanoparticles/chemistry , Methicillin-Resistant Staphylococcus aureus/drug effects , Pseudomonas aeruginosa/drug effects , Anti-Bacterial Agents/chemical synthesis , Biofilms/growth & development , Escherichia coli/enzymology , Escherichia coli/growth & development , Gene Expression , Green Chemistry Technology , Methicillin-Resistant Staphylococcus aureus/enzymology , Methicillin-Resistant Staphylococcus aureus/growth & development , Microbial Sensitivity Tests , Microwaves , Particle Size , Plant Extracts/chemistry , Plant Leaves/chemistry , Pseudomonas aeruginosa/enzymology , Pseudomonas aeruginosa/growth & development , Silver/chemistry , beta-Lactamases/genetics , beta-Lactamases/metabolism
9.
Biochim Biophys Acta ; 1850(6): 1245-52, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25731981

ABSTRACT

BACKGROUND: Multidrug-resistant bacteria, such as methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin resistant enterococci (VRE), cause serious infections at clinical sites, for which the development of new drugs is necessary. We screened candidates for new antibiotics and investigated its action mechanism. METHODS: An antimicrobial compound was isolated from an extract of Nuphar japonicum. Its chemical structure was determined by NMR, MS, and optical rotation. We measured its minimum inhibitory concentration (MIC) using the microdilution method. The effects of the compound on DNA gyrase and DNA topoisomerase IV were investigated with DNA supercoiling, decatenation, and cleavage assay. RESULTS: We isolated and identified 6,6'-dihydroxythiobinupharidine as the antimicrobial compound. The MIC of this compound was 1-4 µg/mL against various MRSA and VRE strains. We also demonstrated that this compound inhibited DNA topoisomerase IV (IC50 was 10-15 µM), but not DNA gyrase in S. aureus, both of which are known to be the targets of quinolone antibiotics and necessary for DNA replication. However, this compound only exhibited slight cross-resistance to norfloxacin-resistant S. aureus, which indicated that DTBN might inhibit other targets besides topoisomerase IV. These results suggest that 6,6'-dihydroxythiobinupharidine may be a potent candidate or seed for novel antibacterial agents. CONCLUSIONS: DTBN from N. japonicum showed anti-MRSA and anti-VRE activities. DTBN might be involved in the inhibition of DNA topoisomerase IV. GENERAL SIGNIFICANCE: DTBN might be useful as a seed compound. The information on the inhibition mechanism of DTBN will be useful for the modification of DTBN towards developing novel anti-MRSA and anti-VRE drug.


Subject(s)
Alkaloids/pharmacology , Anti-Bacterial Agents/pharmacology , Drug Resistance, Multiple, Bacterial , Enterococcus/drug effects , Methicillin-Resistant Staphylococcus aureus/drug effects , Nuphar , Plant Extracts/pharmacology , Vancomycin Resistance , Alkaloids/chemistry , Alkaloids/isolation & purification , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/isolation & purification , DNA Topoisomerase IV/antagonists & inhibitors , DNA Topoisomerase IV/metabolism , Dose-Response Relationship, Drug , Enterococcus/enzymology , Methicillin-Resistant Staphylococcus aureus/enzymology , Methicillin-Resistant Staphylococcus aureus/genetics , Microbial Sensitivity Tests , Molecular Structure , Nuphar/chemistry , Phytotherapy , Plant Extracts/chemistry , Plant Extracts/isolation & purification , Plants, Medicinal , Rhizome , Time Factors , Topoisomerase II Inhibitors/pharmacology
10.
J Infect Chemother ; 21(5): 330-9, 2015 May.
Article in English | MEDLINE | ID: mdl-25813608

ABSTRACT

Gram-positive cocci are a well-recognised major cause of nosocomial infection worldwide. Bloodstream infections due to methicillin-resistant Staphylococcus aureus, methicillin-resistant coagulase-negative staphylococci, and multi-drug resistant enterococci are a cause of concern for physicians due to their related morbidity and mortality rates. Aim of this article is to review the current state of knowledge regarding the management of BSI caused by staphylococci and enterococci, including infective endocarditis, and to identify those factors that may help physicians to manage these infections appropriately. Moreover, we discuss the importance of an appropriate use of antimicrobial drugs, taking in consideration the in vitro activity, clinical efficacy data, pharmacokinetic/pharmacodynamic parameters, and potential side effects.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Bacteremia/drug therapy , Endocarditis, Bacterial/drug therapy , Gram-Positive Bacterial Infections/drug therapy , Staphylococcal Infections/drug therapy , Anti-Bacterial Agents/pharmacology , Bacteremia/microbiology , Coagulase/metabolism , Endocarditis, Bacterial/microbiology , Enterococcus faecalis , Gram-Positive Bacterial Infections/complications , Humans , Methicillin-Resistant Staphylococcus aureus/enzymology , Microbial Sensitivity Tests , Staphylococcal Infections/complications , Vancomycin-Resistant Enterococci
11.
Article in English | MEDLINE | ID: mdl-25542226

ABSTRACT

The advent of carbapenem resistance by the production of ß-lectamases and mutated penicillin binding proteins (PBPs) has challenged the treatment of Enterobacteriaceae. Hence there is an urgent need to establish drugs that can fit in the pipeline by overcoming those situations. The working hypothesis of the work is based on two facts, i.e., i) design of inhibitors against mutated PBPs to which present drugs cannot bind efficiently to kill pathogen by inhibiting cell wall formation, ii) design of molecules that can bind with ß-lectamases with high affinity, so that they can supplement available drugs preventing their unwanted hydrolysis. In this work, over thousands of thienamycin (first natural carbapenem) derivatives were generated and out of which non-toxic 273 molecules were used for further study. Out of which, only few followed the first hypothesis and rest obeyed the second. Ligand L5 strictly followed the first hypothesis and L1-L4 followed to a satisfactory level. Molecular dynamic simulation was performed to check post-docking stability of the pharmacophores.


Subject(s)
Anti-Bacterial Agents/chemistry , Bacterial Proteins/antagonists & inhibitors , Carbapenems/chemistry , Enzyme Inhibitors/chemistry , Klebsiella pneumoniae/enzymology , Methicillin-Resistant Staphylococcus aureus/enzymology , Penicillin-Binding Proteins/antagonists & inhibitors , Anti-Bacterial Agents/pharmacology , Bacterial Infections/drug therapy , Bacterial Infections/microbiology , Bacterial Proteins/metabolism , Carbapenems/pharmacology , Computer-Aided Design , Drug Design , Drug Evaluation, Preclinical , Enzyme Inhibitors/pharmacology , High-Throughput Screening Assays , Humans , Molecular Docking Simulation , Molecular Dynamics Simulation , Penicillin-Binding Proteins/metabolism , beta-Lactamases/metabolism
12.
Pak J Biol Sci ; 17(1): 49-55, 2014 Jan 01.
Article in English | MEDLINE | ID: mdl-24783777

ABSTRACT

Temu kunci (Kaempferia pandurata (Roxb.)) has a number of benefits and one of these is antibacterial. The rhizome is said to have antibacterial activity against Streptococcus mutans, Lactocillus sp. and Candida albicans. The aim of the study is to test the antibacterial activity of Kaempferia pandurata (Roxb.) rhizome ethanol extract on methicillin-resistant Staphylococcus aureus (MRSA), methicillin-resistant coagulase negative Staphylococci (MRCNS), methicillin-sensitive Staphylococcus aureus (MSSA), Bacillus subtilis and Salmonella typhi. Antimicrobial activity of the extract was assayed by the microdilution method using Mueller Hinton Broth with sterilized 96 round-bottomed microwells to determine the Minimum Inhibitory Concentration (MIC) as well as to determine the time-kill activity. The MIC of the extract was 16 ppm for both Bacillus subtilis and MRSA; 8 ppm for both MSSA and Salmonella typhi and 4 ppm for MRCNS. Ethanol extract of Kaempferia pandurata (Roxb.) showed antibacterial activity against all the tested bacteria and was the most potent against MRCNS, with MIC 4 ppm. The killing profile test of the extract displayed bactericidal activity at 8-16 ppm against MRSA, MSSA, Bacillus subtilis and Salmonella typhi and bacteriostatic activity at 4 ppm towards MRCNS.


Subject(s)
Bacillus subtilis/drug effects , Ethanol/chemistry , Methicillin-Resistant Staphylococcus aureus/drug effects , Plant Extracts/pharmacology , Rhizome/chemistry , Salmonella typhi/drug effects , Zingiberaceae/chemistry , Anti-Bacterial Agents/isolation & purification , Anti-Bacterial Agents/pharmacology , Coagulase/deficiency , Methicillin-Resistant Staphylococcus aureus/enzymology , Plant Extracts/isolation & purification
13.
J Med Chem ; 57(9): 3707-14, 2014 May 08.
Article in English | MEDLINE | ID: mdl-24588790

ABSTRACT

Drug-resistant bacterial infections and lack of available antibacterial agents in clinical practice are becoming serious risks to public health. We synthesized a new class of haloemodins by modifying a traditional Chinese medicine component, emodin. The novel haloemodin exerts strong inhibitory activity on bacterial topoisomerase I and DNA gyrase, and not on the topoisomerases of human origin. In principle, it shows remarkable antibacterial activities against laboratory and clinically isolated Gram-positive bacteria, including vancomycin-resistant Enterococcus faecium and methicillin-resistant Staphylococcus aureus. We further expanded its antibacterial spectrum into against Gram-negative bacteria with the assistance of polymyxin B nonapeptide, which helps haloemodin to penetrate through the bacterial outer membrane. Finally, the therapeutic effect of haloemodin in vivo was confirmed in curing S. aureus-induced keratitis on rabbit model. With distinctive structural difference from the antibiotics we used, the haloemodins are of value as promising antibacterial pharmacophore, especially for combat the infections caused by drug-resistant pathogens.


Subject(s)
Anti-Bacterial Agents/pharmacology , Emodin/analogs & derivatives , Enterococcus faecium/drug effects , Methicillin-Resistant Staphylococcus aureus/drug effects , Topoisomerase I Inhibitors/pharmacology , Topoisomerase II Inhibitors/pharmacology , Animals , Anti-Bacterial Agents/therapeutic use , Emodin/pharmacology , Enterococcus faecium/enzymology , Keratitis/drug therapy , Keratitis/microbiology , Methicillin-Resistant Staphylococcus aureus/enzymology , Mice , Microbial Sensitivity Tests , Rabbits , Topoisomerase I Inhibitors/therapeutic use , Topoisomerase II Inhibitors/therapeutic use
14.
PLoS One ; 7(1): e29886, 2012.
Article in English | MEDLINE | ID: mdl-22253815

ABSTRACT

BACKGROUND: Methicillin-resistant Staphylococcus aureus (MRSA) causes threatening infection-related mortality worldwide. Currently, spread of multi-drug resistance (MDR) MRSA limits therapeutic options and requires new approaches to "druggable" target discovery, as well as development of novel MRSA-active antibiotics. RNA polymerase primary σ7° (encoded by gene rpoD) is a highly conserved prokaryotic factor essential for transcription initiation in exponentially growing cells of diverse S. aureus, implying potential for antisense inhibition. METHODOLOGY/PRINCIPAL FINDINGS: By synthesizing a serial of cell penetrating peptide conjugated peptide nucleic acids (PPNAs) based on software predicted parameters and further design optimization, we identified a target sequence (234 to 243 nt) within rpoD mRNA conserved region 3.0 being more sensitive to antisense inhibition. A (KFF)3K peptide conjugated 10-mer complementary PNA (PPNA2332) was developed for potent micromolar-range growth inhibitory effects against four pathogenic S. aureus strains with different resistance phenotypes, including clinical vancomycin-intermediate resistance S. aureus and MDR-MRSA isolates. PPNA2332 showed bacteriocidal antisense effect at 3.2 fold of MIC value against MRSA/VISA Mu50, and its sequence specificity was demonstrated in that PPNA with scrambled PNA sequence (Scr PPNA2332) exhibited no growth inhibitory effect at higher concentrations. Also, PPNA2332 specifically interferes with rpoD mRNA, inhibiting translation of its protein product σ7° in a concentration-dependent manner. Full decay of mRNA and suppressed expression of σ7° were observed for 40 µM or 12.5 µM PPNA2332 treatment, respectively, but not for 40 µM Scr PPNA2332 treatment in pure culture of MRSA/VISA Mu50 strain. PPNA2332 (≥1 µM) essentially cleared lethal MRSA/VISA Mu50 infection in epithelial cell cultures, and eliminated viable bacterial cells in a time- and concentration- dependent manner, without showing any apparent toxicity at 10 µM. CONCLUSIONS: The present result suggested that RNAP primary σ7° is a very promising candidate target for developing novel antisense antibiotic to treat severe MRSA infections.


Subject(s)
DNA-Directed RNA Polymerases/antagonists & inhibitors , Methicillin-Resistant Staphylococcus aureus/drug effects , Methicillin-Resistant Staphylococcus aureus/enzymology , Peptide Nucleic Acids/pharmacology , Peptide Nucleic Acids/therapeutic use , RNA, Antisense/therapeutic use , Sigma Factor/antagonists & inhibitors , Staphylococcal Infections/drug therapy , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Base Sequence , Cells, Cultured , DNA-Directed RNA Polymerases/metabolism , Epithelial Cells/drug effects , Epithelial Cells/microbiology , Epithelial Cells/pathology , Gene Expression Regulation, Bacterial/drug effects , Humans , Methicillin-Resistant Staphylococcus aureus/genetics , Methicillin-Resistant Staphylococcus aureus/growth & development , Microbial Sensitivity Tests , Microbial Viability/drug effects , Molecular Sequence Data , Nucleic Acid Conformation , Protective Agents/pharmacology , RNA, Antisense/pharmacology , RNA, Messenger/chemistry , RNA, Messenger/genetics , RNA, Messenger/metabolism , Sequence Homology, Amino Acid , Sigma Factor/metabolism , Staphylococcal Infections/microbiology
15.
Eur J Med Chem ; 47(1): 261-9, 2012 Jan.
Article in English | MEDLINE | ID: mdl-22104972

ABSTRACT

ß-Ketoacyl-acyl carrier protein synthase III (KAS III) is a condensing enzyme in bacterial fatty acid synthesis and a potential target while designing novel antibiotics. In our previous report, we discovered the lead compound YKAs3003, which serves as an inhibitor of Escherichia coli KAS III (ecKAS III), and determined a reliable pharmacophore map from in silico screening. In this study, we determined two pharmacophore maps from receptor-oriented pharmacophore-based in silico screening of the x-ray structure of Staphylococcus aureus KAS III (saKAS III) to identify potent saKAS III inhibitors. We discovered a new potential inhibitor (6) with broad-spectrum antimicrobial activity and 0.8 nM binding affinity for saKAS III, proving the reliability of our pharmacophore map. Using optimization procedures, we identified three new antimicrobial saKAS III inhibitors: 6c (2,4-dichloro-benzoic acid (2,3,4-trihydroxy-benzylidene)-hydrazide), 6e (4-[(3-chloro-pyrazin-2-yl)-hydrazonomethyl]-benzene-1,3-diol), and 6 (4-[(5-trifluoromethyl-pyridin-2-yl)-hydrazonomethyl]-benzene-1,3-diol). All three inhibitors have a novel 4-hydrazonomethyl-benzene-1,3-diol core structure. These inhibitors exhibited high binding affinity to saKAS III and highly selective antimicrobial activities against S. aureus and methicillin-resistant S. aureus, with minimal inhibitory concentration values of 1-2 µg/mL.


Subject(s)
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase/antagonists & inhibitors , Anti-Infective Agents/pharmacology , Drug Evaluation, Preclinical/methods , Enzyme Inhibitors/pharmacology , Staphylococcus aureus/enzymology , 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase/chemistry , 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase/metabolism , Animals , Anti-Infective Agents/metabolism , Anti-Infective Agents/toxicity , Enzyme Inhibitors/metabolism , Enzyme Inhibitors/toxicity , Methicillin-Resistant Staphylococcus aureus/drug effects , Methicillin-Resistant Staphylococcus aureus/enzymology , Mice , Models, Molecular , NIH 3T3 Cells , Protein Conformation , Spectrometry, Fluorescence , Staphylococcus aureus/drug effects , Substrate Specificity
16.
J Ethnopharmacol ; 137(1): 767-73, 2011 Sep 01.
Article in English | MEDLINE | ID: mdl-21782012

ABSTRACT

ETHNOPHARMACOLOGICAL RELEVANCE: Baicalein, the active constituent derived from Scutellaria baicalensis Georgi., has previously been shown to significantly restore the effectiveness of ß-lactam antibiotics and tetracycline against methicillin-resistant Staphylococcus aureus (MRSA). With multiple therapeutic benefits, the antibacterial actions of baicalein may also be involved in overcoming other bacterial resistance mechanisms. The aim of the present study was to further investigate antibacterial activities of baicalein in association with various antibiotics against selected Staphylococcus aureus strains with known specific drug resistance mechanisms. MATERIAL AND METHODS: A panel of clinical MRSA strains was used for further confirmation of the antibacterial activities of baicalein. The effect of baicalein on inhibiting the enzymatic activity of a newly discovered MRSA-specific pyruvate kinase (PK), which is essential for Staphylococcus aureus growth and survival was also examined. RESULTS: In the checkerboard dilution test and time-kill assay, baicalein at 16 µg/ml could synergistically restore the antibacterial actions of ciprofloxacin against the NorA efflux pump overexpressed SA-1199B, but not with the poor NorA substrate, pefloxacin. Moreover, synergistic effects were observed when baicalein was combined with ciprofloxacin against 12 out of 20 clinical ciprofloxacin resistant strains. For MRSA PK studies, baicalein alone could inhibit the enzymatic activity of MRSA PK in a dose-dependent manner. CONCLUSION: Our results demonstrated that baicalein could significantly reverse the ciprofloxacin resistance of MRSA possibly by inhibiting the NorA efflux pump in vitro. The inhibition of MRSA PK by baicalein could lead to a deficiency of ATP which might further contribute to the antibacterial actions of baicalein against MRSA.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacterial Proteins/metabolism , Ciprofloxacin/pharmacology , Drug Resistance, Multiple, Bacterial/drug effects , Enzyme Inhibitors/pharmacology , Flavanones/pharmacology , Methicillin-Resistant Staphylococcus aureus/drug effects , Multidrug Resistance-Associated Proteins/metabolism , Pyruvate Kinase/antagonists & inhibitors , Bacterial Proteins/genetics , Dose-Response Relationship, Drug , Drug Synergism , Drug Therapy, Combination , Methicillin-Resistant Staphylococcus aureus/enzymology , Methicillin-Resistant Staphylococcus aureus/genetics , Methicillin-Resistant Staphylococcus aureus/growth & development , Microbial Sensitivity Tests , Multidrug Resistance-Associated Proteins/genetics , Pyruvate Kinase/metabolism , Time Factors , Up-Regulation
17.
Article in English | MEDLINE | ID: mdl-20644237

ABSTRACT

Simulations were carried out to analyze a promising new antimicrobial treatment strategy for targeting antibiotic-resistant bacteria called the ß-lactamase-dependent prodrug delivery system. In this system, the antibacterial drugs are delivered as inactive precursors that only become activated after contact with an enzyme characteristic of many species of antibiotic-resistant bacteria (ß-lactamase enzyme). The addition of an activation step contributes an extra layer of complexity to the system that can lead to unexpected emergent behavior. In order to optimize for treatment success and minimize the risk of resistance development, there must be a clear understanding of the system dynamics taking place and how they impact on the overall response. It makes sense to use a systems biology approach to analyze this method because it can facilitate a better understanding of the complex emergent dynamics arising from diverse interactions in populations. This paper contains an initial theoretical examination of the dynamics of this system of activation and an assessment of its therapeutic potential from a theoretical standpoint using an agent-based modeling approach. It also contains a case study comparison with real-world results from an experimental study carried out on two prodrug candidate compounds in the literature.


Subject(s)
Anti-Bacterial Agents/administration & dosage , Drug Delivery Systems , Methicillin-Resistant Staphylococcus aureus/drug effects , Methicillin-Resistant Staphylococcus aureus/enzymology , Models, Biological , Prodrugs/administration & dosage , beta-Lactam Resistance , Anti-Bacterial Agents/pharmacokinetics , Anti-Bacterial Agents/pharmacology , Cephalosporins/pharmacokinetics , Cephalosporins/pharmacology , Computer Simulation , Diffusion , Microbial Sensitivity Tests , Prodrugs/pharmacokinetics , Prodrugs/pharmacology , Systems Biology/methods , Triclosan/administration & dosage , Triclosan/pharmacokinetics , Triclosan/pharmacology , beta-Lactamases/biosynthesis , beta-Lactamases/metabolism
SELECTION OF CITATIONS
SEARCH DETAIL