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1.
Nat Biotechnol ; 36(3): 249-257, 2018 03.
Article in English | MEDLINE | ID: mdl-29431741

ABSTRACT

Cell walls in crops and trees have been engineered for production of biofuels and commodity chemicals, but engineered varieties often fail multi-year field trials and are not commercialized. We engineered reduced expression of a pectin biosynthesis gene (Galacturonosyltransferase 4, GAUT4) in switchgrass and poplar, and find that this improves biomass yields and sugar release from biomass processing. Both traits were maintained in a 3-year field trial of GAUT4-knockdown switchgrass, with up to sevenfold increased saccharification and ethanol production and sixfold increased biomass yield compared with control plants. We show that GAUT4 is an α-1,4-galacturonosyltransferase that synthesizes homogalacturonan (HG). Downregulation of GAUT4 reduces HG and rhamnogalacturonan II (RGII), reduces wall calcium and boron, and increases extractability of cell wall sugars. Decreased recalcitrance in biomass processing and increased growth are likely due to reduced HG and RGII cross-linking in the cell wall.


Subject(s)
Biofuels , Cell Wall/genetics , Glucuronosyltransferase/genetics , Pectins/biosynthesis , Biomass , Boron/metabolism , Calcium/metabolism , Cell Wall/enzymology , Cell Wall/metabolism , Crops, Agricultural , Glucuronosyltransferase/chemistry , Panicum/enzymology , Panicum/genetics , Pectins/genetics , Plants, Genetically Modified/enzymology , Plants, Genetically Modified/genetics , Populus/enzymology , Populus/genetics , Sugars/metabolism
2.
Phytochemistry ; 94: 45-52, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23809633

ABSTRACT

Switchgrass (Panicum virgatum L.) is being developed as a bioenergy species. Recently an early version of its genome has been released permitting a route to the cloning and analysis of key proteins. Ascorbate peroxidases (APx) are an important part of the antioxidant defense system of plant cells and present a well studied model to understand structure-function relationships. Analysis of the genome indicates that switchgrass encodes several cytosolic ascorbate peroxidases with apparent varying levels of tissue expression. A major cytosolic ascorbate peroxidase was thus selected for further studies. This gene was cloned and expressed in Escherichia coli cells to obtain purified active protein. Full heme incorporation of the enzyme was achieved utilizing slow growth and supplementing the media with 5-aminolevulinic acid. The enzyme was observed to be monomeric in solution via size exclusion chromatography. Activity toward ascorbate was observed that was non-Michaelis-Menten in nature. A site-directed mutant, R172S, was made in an attempt to differentiate activity against ascorbate versus other substrates. The R172S protein exhibited negligible ascorbate peroxidase activity, but showed near wild type activity toward other aromatic substrates.


Subject(s)
Ascorbate Peroxidases/metabolism , Ascorbic Acid/metabolism , Panicum/enzymology , Plant Proteins/metabolism , Ascorbate Peroxidases/classification , Ascorbate Peroxidases/genetics , Ascorbic Acid/chemistry , Binding Sites/genetics , Biocatalysis , Cytosol/enzymology , Electrophoresis, Polyacrylamide Gel , Escherichia coli/genetics , Kinetics , Models, Molecular , Molecular Structure , Mutagenesis, Site-Directed , Panicum/genetics , Phylogeny , Plant Proteins/chemistry , Plant Proteins/genetics , Protein Structure, Tertiary , Recombinant Proteins/metabolism , Spectrophotometry , Substrate Specificity
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