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1.
Parasitol Res ; 121(11): 3203-3215, 2022 Nov.
Article in English | MEDLINE | ID: mdl-36056960

ABSTRACT

Espinilho savanna ("seasonal steppe savanna") is a unique vegetation formation of the Pampas biome that is found near the tri-border of Brazil, Uruguay, and Argentina. The Yellow Cardinal (Gubernatrix cristata) is a flagship species of this ecosystem, but it is classified as "critically endangered" in Brazil due to habitat loss and poaching for the illegal trade. Population supplementation through the release of individuals that were captive-bred or apprehended by authorities from the illegal trade has been considered as a conservation strategy for this species; however, the risk of pathogen introduction is a critical concern. We used microscopy and molecular methods to investigate the occurrence of blood parasites in wild passerines (n = 64, including three Yellow Cardinals) at Espinilho State Park, Rio Grande do Sul, Brazil, and in captive Yellow Cardinals (n = 30) at three facilities in Brazil. Haemosporidian parasites were detected in the blood smears of 10.9% of the wild passerines, comprising the morphospecies Haemoproteus erythrogravidus in Rufous-collared Sparrow (Zonotrichia capensis), H. quiscalus in Grayish Baywing (Agelaioides badius), and H. tyranni in Great Kiskadee (Pitangus sulphuratus); these are the southernmost records for these morphospecies and their first record for the Pampas biome. No haemosporidian parasites were detected in the blood smears of the Yellow Cardinals, wild or captive. Microfilariae were detected in the blood smears of 14.1% of the wild passerines, including all wild Yellow Cardinals, and in 43.3% of captive Yellow Cardinals. Trypanosoma sp. was detected in the blood smear of one captive Yellow Cardinal. Nested PCR and gene sequencing of the cyt-b gene of Haemoproteus/Plasmodium was used to test a subset of wild passerines and captive Yellow Cardinals, allowing for the molecular barcoding of H. quiscalus lineage AGEBAD04 and H. tyranni lineage PITSUL01; additionally, DNA identical to that of lineage PITSUL01 was detected in the blood of one captive Yellow Cardinal. This study provides valuable data to support the conservation management of the Yellow Cardinal and other threatened passerines from the Pampas and highlights the need for further studies on the epidemiology and pathology of filarioid worms and trypanosomes in passerines from this biome.


Subject(s)
Bird Diseases , Haemosporida , Lepidoptera , Parasites , Protozoan Infections, Animal , Sparrows , Animals , Bird Diseases/parasitology , Brazil , Dietary Supplements , Ecosystem , Haemosporida/genetics , Parasites/genetics , Phylogeny , Protozoan Infections, Animal/epidemiology , Protozoan Infections, Animal/parasitology
2.
Int J Parasitol ; 52(8): 509-518, 2022 07.
Article in English | MEDLINE | ID: mdl-35533730

ABSTRACT

Parasites, similar to all other organisms, time themselves to environmental cues using a molecular clock to generate and maintain rhythms. Chronotherapeutic (timed treatment) techniques based on such rhythms offer great potential for improving control of chronic, problematic parasites. Fish lice are a key disease threat in aquaculture, with current control insufficient. Assessing the rhythmicity of fish lice transcriptomes offers not only insight into the viability of chronotherapy, but the opportunity to identify new drug targets. Here, for the first known time in any crustacean parasite, diel changes in gene transcription are examined, revealing that approximately half of the Argulus foliaceus annotated transcriptome displays significant daily rhythmicity. We identified rhythmically transcribed putative clock genes including core clock/cycle and period/timeless pairs, alongside rhythms in feeding-associated genes and processes involving immune response, as well as fish louse drug targets. A substantial number of gene pathways showed peak transcription in hours immediately preceding onset of light, potentially in anticipation of peak host anti-parasite responses or in preparation for increased feeding activity. Genes related to immune haemocyte activity and chitin development were more highly transcribed 4 h post light onset, although inflammatory gene transcription was highest during dark periods. Our study provides an important resource for application of chronotherapy in fish lice; timed application could increase efficacy and/or reduce dose requirement, improving the current landscape of drug resistance and fish health while reducing the economic cost of infection.


Subject(s)
Arguloida , Fish Diseases , Parasites , Phthiraptera , Animals , Aquaculture , Arguloida/genetics , Fish Diseases/parasitology , Parasites/genetics , Phthiraptera/genetics , Transcriptome
3.
Nat Commun ; 12(1): 6729, 2021 11 18.
Article in English | MEDLINE | ID: mdl-34795270

ABSTRACT

Supplementation with micronutrients, including vitamins, iron and zinc, is a key strategy to alleviate child malnutrition. However, association of gastrointestinal disorders with iron has led to ongoing debate over their administration. To better understand their impact on gut microbiota, we analyse the bacterial, protozoal, fungal and helminth communities of stool samples collected from a subset of 80 children at 12 and 24 months of age, previously enrolled into a large cluster randomized controlled trial of micronutrient supplementation in Pakistan (ClinicalTrials.gov identifier NCT00705445). We show that while bacterial diversity is reduced in supplemented children, vitamins and iron (as well as residence in a rural setting) may promote colonization with distinct protozoa and mucormycetes, whereas the addition of zinc appears to ameliorate this effect. We suggest that the risks and benefits of micronutrient interventions may depend on eukaryotic communities, potentially exacerbated by exposure to a rural setting. Larger studies are needed to evaluate the clinical significance of these findings and their impact on health outcomes.


Subject(s)
Dietary Supplements , Intestines/drug effects , Micronutrients/administration & dosage , Mycobiome/drug effects , Animals , Bacteria/classification , Bacteria/drug effects , Bacteria/genetics , Child, Preschool , Female , Fungi/classification , Fungi/drug effects , Fungi/genetics , Humans , Infant , Intestines/microbiology , Intestines/parasitology , Iron/administration & dosage , Male , Mycobiome/genetics , Parasites/classification , Parasites/drug effects , Parasites/genetics , Phylogeny , Prospective Studies , Vitamins/administration & dosage , Zinc/administration & dosage
4.
Food Microbiol ; 95: 103703, 2021 May.
Article in English | MEDLINE | ID: mdl-33397621

ABSTRACT

Regarding preparing and serving foods, food handlers have an influential role in the spreading of foodborne infections. Due to the great potential to cause foodborne infections, intestinal parasites (IPs) are considered a significant public health problem in today's societies. In Iran, despite several regional reports, national data on IPs prevalence in food handlers are lacking. The aim of the present study, therefore, is to estimate the pooled prevalence of IPs infections and associated pooled odds ratio of educational level among food handlers in Iran. PubMed, Web of Science, Scopus, Embase, and Google Scholar databases (international) and SID and Magiran databases (national) were systematically searched for studies that reporting the prevalence of IPs in food handlers in Iran, published between 2000 and 2020. Pooled prevalence was estimated using a random-effects model with a 95% confidence interval (CI) and depicted as a forest plot, while heterogeneity was evaluated using Cochran's Q-test. The overall pooled prevalence estimate for IPs was 19.3% (95% CI = 14.9-23.7%). Prevalence of the protozoan parasites (20%, 95% CI = 13.7-26.3%) was significantly higher than that of the helminthic parasites (1.6%, 95% CI = 1.1-2.0%). Giardia lamblia (5.2%), Entamoeba coli (5.0%), and Blastocystis spp. (4.4%), as protozoan parasites, and Ascaris lumbricoides (1.4%), Enterobius vermicularis (0.9%), and Hymenolepis nana (0.5%), as helminthic parasites, were the most commonly reported species. Food handlers with low educational levels were 20% more exposed to IPs infection, compared to those with high educational levels (OR = 1.21, 95% CI = 0.88 to 1.65). The prevalence of IPs infections among food handlers in Iran is significant. Besides taking into account this epidemiologic information, a holistic approach, including periodic stool screening, health education, and treatment of infected food handlers, will help in the control of these infections in Iran.


Subject(s)
Intestinal Diseases, Parasitic/parasitology , Parasites/isolation & purification , Animals , Feces/parasitology , Food Handling , Food Safety , Food Services , Humans , Intestinal Diseases, Parasitic/epidemiology , Iran/epidemiology , Parasites/classification , Parasites/genetics , Prevalence
5.
Sci Rep ; 10(1): 3315, 2020 02 24.
Article in English | MEDLINE | ID: mdl-32094373

ABSTRACT

Beet cyst nematodes depend on a set of secretory proteins (effectors) for the induction and maintenance of their syncytial feeding sites in plant roots. In order to understand the relationship between the beet cyst nematode H. schachtii and its host, identification of H. schachtii effectors is crucial and to this end, we sequenced a whole animal pre-infective J2-stage transcriptome in addition to pre- and post-infective J2 gland cell transcriptome using Next Generation Sequencing (NGS) and identified a subset of sequences representing putative effectors. Comparison between the transcriptome of H. schachtii and previously reported related cyst nematodes and root-knot nematodes revealed a subset of esophageal gland related sequences and putative effectors in common across the tested species. Structural and functional annotation of H. schachtii transcriptome led to the identification of nearly 200 putative effectors. Six putative effector expressions were quantified using qPCR and three of them were functionally analyzed using RNAi. Phenotyping of the RNAi nematodes indicated that all tested genes decrease the level of nematodes pathogenicity and/or the average female size, thereby regulating cyst nematode parasitism. These discoveries contribute to further understanding of the cyst nematode parasitism.


Subject(s)
Beta vulgaris/parasitology , Parasites/genetics , Plant Diseases/parasitology , Transcriptome/genetics , Tylenchoidea/physiology , Alternative Splicing/genetics , Animal Structures/metabolism , Animals , Helminth Proteins/genetics , Helminth Proteins/metabolism , Host-Parasite Interactions/genetics , Molecular Sequence Annotation , Reproducibility of Results
6.
Int J Parasitol ; 50(3): 195-208, 2020 03.
Article in English | MEDLINE | ID: mdl-32087247

ABSTRACT

The Manila clam (Ruditapes philippinarum) is the bivalve species with the highest global production from both fisheries and aquaculture, but its production is seriously threatened by perkinsosis, a disease caused by the protozoan parasite Perkinsus olseni. To understand the molecular mechanisms underlying R. philippinarum-P. olseni interactions, we analysed the gene expression profiles of in vitro challenged clam hemocytes and P. olseni trophozoites, using two oligo-microarray platforms, one previously validated for R. philippinarum hemocytes and a new one developed and validated in this study for P. olseni. Manila clam hemocytes were in vitro challenged with trophozoites, zoospores, and extracellular products from P. olseni in vitro cultures, while P. olseni trophozoites were in vitro challenged with Manila clam plasma along the same time-series (1 h, 8 h, and 24 h). The hemocytes showed a fast activation of the innate immune response, particularly associated with hemocyte recruitment, in the three types of challenges. Nevertheless, different immune-related pathways were activated in response to the different parasite stages, suggesting specific recognition mechanisms. Furthermore, the analyses provided useful complementary data to previous in vivo challenges, and confirmed the potential of some proposed biomarkers. The combined analysis of gene expression in host and parasite identified several processes in both the clam and P. olseni, such as redox and glucose metabolism, protease activity, apoptosis and iron metabolism, whose modulation suggests cross-talk between parasite and host. This information might be critical to determine the outcome of the infection, thus highlighting potential therapeutic targets. Altogether, the results of this study aid understanding the response and interaction between R. philippinarum and P. olseni, and will contribute to developing effective control strategies for this threatening parasitosis.


Subject(s)
Alveolata , Bivalvia/parasitology , Alveolata/genetics , Alveolata/metabolism , Animals , Bivalvia/genetics , Bivalvia/metabolism , Blood Cells/metabolism , Host-Parasite Interactions/immunology , Immunity, Innate , In Vitro Techniques/methods , Parasites/genetics , Parasites/metabolism , Shellfish/parasitology , Transcriptome , Trophozoites/genetics , Trophozoites/metabolism
7.
Mol Ecol ; 28(22): 4839-4841, 2019 11.
Article in English | MEDLINE | ID: mdl-31713935

ABSTRACT

If there was any doubt of the primary role that plant secondary metabolites play in host-parasite co-evolution, the "From the Cover" paper by Tan et al. (2019) featured in this issue of Molecular Ecology will lay these doubts to rest. The group's previous work on monarch butterflies (Danaus plexippus) infected with the protozoan pathogen Ophryocystis elektroscirrha (OE) demonstrated higher survival and lower spore load on high cardenolide-producing milkweed (Asclepias curassavica) (Figure 1a) compared with low cardenolide-producing milkweed (A. incarnata) (de Roode, Pedersen, Hunter, & Altizer, 2008) (Figure 1b). The mechanism of this protective effect is not directly clear, but a leading hypothesis is that the cardenolides confer protection through toxicity to the parasite. However, the role of the caterpillar immune system in managing this parasite is largely unknown. Novel insights into the influence of toxic plant metabolites on caterpillar immunity are explored in Tan et al. (2019). Using transcriptomics to probe this model system, the authors found that herbivore immune genes were down-regulated and detoxification genes were up-regulated when larvae were reared on the milkweed species with high cardenolide concentrations (A. curassavica). Surprisingly, immune genes were not significantly up- or down-regulated in response to protozoan infection alone. This tantalizing result suggests that sequestered plant metabolites, not immunity, is reining in protozoan infections in these larvae, and promoting survival. As the authors point out, the strategy to invest in sequestration may come at a cost, which is to the detriment of the immune response (Smilanich, Dyer, Chambers, & Bowers, 2009). However, the cost becomes worth the investment when chemical sequestration takes on an antipathogen role. The novelty of the Tan et al. (2019) paper is that they show the investment in sequestration leading to a possible divestment in immunity.


Subject(s)
Butterflies/genetics , Plants, Medicinal/parasitology , Animals , Butterflies/immunology , Down-Regulation/genetics , Ecology , Herbivory/genetics , Host-Parasite Interactions/genetics , Host-Parasite Interactions/immunology , Immune System/immunology , Larva/genetics , Parasites/genetics , Parasites/immunology , Up-Regulation/genetics
8.
Mol Ecol ; 28(22): 4845-4863, 2019 11.
Article in English | MEDLINE | ID: mdl-31483077

ABSTRACT

Herbivorous insects have evolved many mechanisms to overcome plant chemical defences, including detoxification and sequestration. Herbivores may also use toxic plants to reduce parasite infection. Plant toxins could directly interfere with parasites or could enhance endogenous immunity. Alternatively, plant toxins could favour down-regulation of endogenous immunity by providing an alternative (exogenous) defence against parasitism. However, studies on genomewide transcriptomic responses to plant defences and the interplay between plant toxicity and parasite infection remain rare. Monarch butterflies (Danaus plexippus) are specialist herbivores of milkweeds (Asclepias spp.), which contain toxic cardenolides. Monarchs have adapted to cardenolides through multiple resistance mechanisms and can sequester cardenolides to defend against bird predators. In addition, high-cardenolide milkweeds confer monarch resistance to a specialist protozoan parasite (Ophryocystis elektroscirrha). We used this system to study the interplay between the effects of plant toxicity and parasite infection on global gene expression. We compared transcriptional profiles between parasite-infected and uninfected monarch larvae reared on two milkweed species. Our results demonstrate that monarch differentially express several hundred genes when feeding on A. curassavica and A. incarnata, two species that differ substantially in cardenolide concentrations. These differentially expressed genes include genes within multiple families of canonical insect detoxification genes, suggesting that they play a role in monarch toxin resistance and sequestration. Interestingly, we found little transcriptional response to infection. However, parasite growth was reduced in monarchs reared on A. curassavica, and in these monarchs, several immune genes were down-regulated, consistent with the hypothesis that medicinal plants can reduce reliance on endogenous immunity.


Subject(s)
Butterflies/genetics , Down-Regulation/genetics , Host-Parasite Interactions/genetics , Plants, Toxic/parasitology , Transcriptome/genetics , Animals , Apicomplexa/genetics , Asclepias/parasitology , Cardenolides , Herbivory/genetics , Larva/genetics , Parasites/genetics
9.
Microbiome ; 6(1): 195, 2018 10 29.
Article in English | MEDLINE | ID: mdl-30373673

ABSTRACT

BACKGROUND: Several of the most devastating human diseases are caused by eukaryotic parasites transmitted by arthropod vectors or through food and water contamination. These pathogens only represent a fraction of all unicellular eukaryotes and helminths that are present in the environment and many uncharacterized organisms might have subtle but pervasive effects on health, including by modifying the microbiome where they reside. Unfortunately, while we have modern molecular tools to characterize bacterial and, to a lesser extent, fungal communities, we lack suitable methods to comprehensively investigate and characterize most unicellular eukaryotes and helminths: the detection of these organisms often relies on microscopy that cannot differentiate related organisms, while molecular assays can only detect the pathogens specifically tested. RESULTS: Here, we describe a novel sequencing-based assay, akin to bacterial 16S rRNA sequencing, that enables high-throughput detection and characterization of a wide range of unicellular eukaryotes and helminths, including those from taxonomical groups containing all common human parasites. We designed and evaluated taxon-specific PCR primer pairs that selectively amplify all species from eight taxonomical groups (Apicomplexa, Amoeba, Diplomonadida, Kinetoplastida, Parabasalia, Nematoda, Platyhelminthes, and Microsporidia). We then used these primers to screen DNA extracted from clinical, biological, and environmental samples, and after next-generation sequencing, identified both known and previously undescribed organisms from most taxa targeted. CONCLUSIONS: This novel high-throughput assay enables comprehensive detection and identification of eukaryotic parasites and related organisms, from a wide range of complex biological and environmental samples. This approach can be easily deployed to many settings and will efficiently complement existing methods and provide a holistic perspective on the microbiome.


Subject(s)
Food Parasitology/methods , Helminths/classification , High-Throughput Nucleotide Sequencing/methods , Parasites/classification , Polymerase Chain Reaction/methods , Animals , Arthropod Vectors/parasitology , DNA, Protozoan/genetics , Food Contamination/analysis , Helminths/genetics , Helminths/isolation & purification , Humans , Parasites/genetics , Parasites/isolation & purification , Water Pollution/analysis
10.
Sci Rep ; 8(1): 7564, 2018 05 15.
Article in English | MEDLINE | ID: mdl-29765091

ABSTRACT

Biodegradation of hydrocarbons by indigenous populations of microorganisms found in petroleum-contaminated water sources represents one of the primary mechanisms by which petroleum and other hydrocarbon pollutants are eliminated from the aquatic environment. The identification of these microorganisms, which have capabilities to convert the majority of toxic hydrocarbons into compounds that are less harmful for end-users, is therefore crucial for bioremediation purposes. The aim of this study was to profile the microbial diversity of two South African petroleum-contaminated water aquifer sites and to determine the microbial adaptation to hydrocarbon degradation using a metagenomics approach. The sequenced samples revealed that protozoa (62.04%) were found to be the most dominant group, followed by fungi (24.49%), unknown (12.87%), and finally other sequences such as Animalia and plantae which were <(0.10%) domains in the first oil-polluted aquifer site. In the second site, protozoa (61.90%), unknown (16.51%), fungi (11.41%) in that order. According to the classification at the genus level, the dominant group was Naegleria (15.21%), followed by Vorticella (6.67%) as the only ciliated protozoan genus, other species such as Arabidopsis (2.97%), Asarum (1.84%) Populus (1.04%) were significantly low and drastically lower in the first site. Regarding the second site, the dominant group was Naegleria (18.29%) followed by Colpoda (9.86%) with the remainder of the genera representing <2%. Overall results demonstrated the ability of various groups of microorganisms to adapt and survive in petroleum oil-polluted water sites regardless of their respective distributions and this can be explored further for their role in bioremediation and environmental management.


Subject(s)
Fungi/classification , Metagenomics/methods , Parasites/classification , Petroleum/adverse effects , Adaptation, Physiological , Animals , Biodegradation, Environmental , Fungi/drug effects , Fungi/genetics , Fungi/isolation & purification , Hydrocarbons/chemistry , Parasites/genetics , Parasites/isolation & purification , Phylogeny , Water Microbiology , Water Pollution, Chemical/adverse effects
11.
Parasitology ; 145(10): 1294-1303, 2018 09.
Article in English | MEDLINE | ID: mdl-29642965

ABSTRACT

Animals are common hosts of mutualistic, commensal and pathogenic microorganisms. Blood-feeding parasites feed on a diet that is nutritionally unbalanced and thus often rely on symbionts to supplement essential nutrients. However, they are also of medical importance as they can be infected by pathogens such as bacteria, protists or viruses that take advantage of the blood-feeding nutritional strategy for own transmission. Since blood-feeding evolved multiple times independently in diverse animals, it showcases a gradient of host-microbe interactions. While some parasitic lineages are possibly asymbiotic and manage to supplement their diet from other food sources, other lineages are either loosely associated with extracellular gut symbionts or harbour intracellular obligate symbionts that are essential for the host development and reproduction. What is perhaps even more diverse are the pathogenic lineages that infect blood-feeding parasites. This microbial diversity not only puts the host into a complicated situation - distinguishing between microorganisms that can greatly decrease or increase its fitness - but also increases opportunity for horizontal gene transfer to occur in this environment. In this review, I first introduce this diversity of mutualistic and pathogenic microorganisms associated with blood-feeding animals and then focus on patterns in their interactions, particularly nutrition, immune cross-talk and gene exchange.


Subject(s)
Arthropods/genetics , Host-Pathogen Interactions/immunology , Parasites/genetics , Symbiosis , Animals , Arthropods/microbiology , Blood , Feeding Behavior , Gene Transfer, Horizontal , Host-Pathogen Interactions/genetics , Microbiota , Nematoda/genetics , Nematoda/microbiology , Parasites/microbiology , Phylogeny , RNA, Ribosomal, 16S/genetics
12.
PLoS One ; 13(4): e0195481, 2018.
Article in English | MEDLINE | ID: mdl-29694397

ABSTRACT

High-resolution insight into parasitic infections and diet of past populations in Northern Europe and the Middle East (500 BC- 1700 AD) was obtained by pre-concentration of parasite eggs from ancient latrines and deposits followed by shotgun sequencing of DNA. Complementary profiling of parasite, vertebrate and plant DNA proved highly informative in the study of ancient health, human-animal interactions as well as animal and plant dietary components. Most prominent were finding of soil-borne parasites transmitted directly between humans, but also meat-borne parasites that require consumption of raw or undercooked fish and pork. The detection of parasites for which sheep, horse, dog, pig, and rodents serves as definitive hosts are clear markers of domestic and synanthropic animals living in closer proximity of the respective sites. Finally, the reconstruction of full mitochondrial parasite genomes from whipworm (Ascaris lumbricoides) and roundworm species (Trichuris trichiura and Trichuris muris) and estimates of haplotype frequencies elucidates the genetic diversity and provides insights into epidemiology and parasite biology.


Subject(s)
DNA, Ancient , Diet , Feces/chemistry , Feces/parasitology , Toilet Facilities , Agriculture , Animals , Archaeology/methods , Biodiversity , DNA, Mitochondrial , DNA, Plant , Eggs , Europe , History, Ancient , Humans , Metagenome , Middle East , Parasites/genetics , Parasitic Diseases/epidemiology , Parasitic Diseases/history , Phylogeny , Sequence Analysis, DNA
13.
Parasit Vectors ; 9: 38, 2016 Jan 27.
Article in English | MEDLINE | ID: mdl-26813411

ABSTRACT

BACKGROUND: Although chronic morbidity in humans from soil transmitted helminth (STH) infections can be reduced by anthelmintic treatment, inconsistent diagnostic tools make it difficult to reliably measure the impact of deworming programs and often miss light helminth infections. METHODS: Cryopreserved stool samples from 796 people (aged 2-81 years) in four villages in Bungoma County, western Kenya, were assessed using multi-parallel qPCR for 8 parasites and compared to point-of-contact assessments of the same stools by the 2-stool 2-slide Kato-Katz (KK) method. All subjects were treated with albendazole and all Ascaris lumbricoides expelled post-treatment were collected. Three months later, samples from 633 of these people were re-assessed by both qPCR and KK, re-treated with albendazole and the expelled worms collected. RESULTS: Baseline prevalence by qPCR (n = 796) was 17 % for A. lumbricoides, 18 % for Necator americanus, 41 % for Giardia lamblia and 15% for Entamoeba histolytica. The prevalence was <1% for Trichuris trichiura, Ancylostoma duodenale, Strongyloides stercoralis and Cryptosporidium parvum. The sensitivity of qPCR was 98% for A. lumbricoides and N. americanus, whereas KK sensitivity was 70% and 32%, respectively. Furthermore, qPCR detected infections with T. trichiura and S. stercoralis that were missed by KK, and infections with G. lamblia and E. histolytica that cannot be detected by KK. Infection intensities measured by qPCR and by KK were correlated for A. lumbricoides (r = 0.83, p < 0.0001) and N. americanus (r = 0.55, p < 0.0001). The number of A. lumbricoides worms expelled was correlated (p < 0.0001) with both the KK (r = 0.63) and qPCR intensity measurements (r = 0.60). CONCLUSIONS: KK may be an inadequate tool for stool-based surveillance in areas where hookworm or Strongyloides are common or where intensity of helminth infection is low after repeated rounds of chemotherapy. Because deworming programs need to distinguish between populations where parasitic infection is controlled and those where further treatment is required, multi-parallel qPCR (or similar high throughput molecular diagnostics) may provide new and important diagnostic information.


Subject(s)
Albendazole/therapeutic use , Anthelmintics/therapeutic use , Antiprotozoal Agents/therapeutic use , Intestinal Diseases, Parasitic/diagnosis , Parasites/isolation & purification , Real-Time Polymerase Chain Reaction/methods , Adolescent , Adult , Aged , Aged, 80 and over , Animals , Child , Child, Preschool , Cryptosporidium parvum/drug effects , Cryptosporidium parvum/genetics , Cryptosporidium parvum/isolation & purification , Entamoeba histolytica/drug effects , Entamoeba histolytica/genetics , Entamoeba histolytica/isolation & purification , Feces/parasitology , Female , Giardia lamblia/drug effects , Giardia lamblia/genetics , Giardia lamblia/isolation & purification , Humans , Intestinal Diseases, Parasitic/drug therapy , Intestinal Diseases, Parasitic/epidemiology , Intestinal Diseases, Parasitic/parasitology , Kenya/epidemiology , Male , Middle Aged , Nematoda/drug effects , Nematoda/genetics , Nematoda/isolation & purification , Parasites/drug effects , Parasites/genetics , Soil/parasitology , Young Adult
14.
Mol Ecol ; 24(22): 5751-66, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26460808

ABSTRACT

Social and brood parasitisms are nonconsumptive forms of parasitism involving the exploitation of the colonies or nests of a host. Such parasites are often related to their hosts and may evolve in various ecological contexts, causing evolutionary constraints and opportunities for both parasites and their hosts. In extreme cases, patterns of diversification between social parasites and their hosts can be coupled, such that diversity of one is correlated with or even shapes the diversity of the other. Aphids in the genus Tamalia induce galls on North American manzanita (Arctostaphylos) and related shrubs (Arbutoideae) and are parasitized by nongalling social parasites or inquilines in the same genus. We used RNA sequencing to identify and generate new gene sequences for Tamalia and performed maximum-likelihood, Bayesian and phylogeographic analyses to reconstruct the origins and patterns of diversity and host-associated differentiation in the genus. Our results indicate that the Tamalia inquilines are monophyletic and closely related to their gall-forming hosts on Arctostaphylos, supporting a previously proposed scenario for origins of these parasitic aphids. Unexpectedly, population structure and host-plant-associated differentiation were greater in the non-gall-inducing parasites than in their gall-inducing hosts. RNA-seq indicated contrasting patterns of gene expression between host aphids and parasites, and perhaps functional differences in host-plant relationships. Our results suggest a mode of speciation in which host plants drive within-guild diversification in insect hosts and their parasites. Shared host plants may be sufficient to promote the ecological diversification of a network of phytophagous insects and their parasites, as exemplified by Tamalia aphids.


Subject(s)
Aphids/genetics , Arctostaphylos/parasitology , Host-Parasite Interactions , Phylogeny , Animals , Arizona , Bayes Theorem , California , Genetic Variation , Likelihood Functions , Nevada , Parasites/genetics , Phylogeography , Plant Tumors/parasitology , Sequence Analysis, RNA
15.
Molecules ; 17(11): 12771-91, 2012 Oct 31.
Article in English | MEDLINE | ID: mdl-23114614

ABSTRACT

This review summarizes human infections caused by endoparasites, including protozoa, nematodes, trematodes, and cestodes, which affect more than 30% of the human population, and medicinal plants of potential use in their treatment. Because vaccinations do not work in most instances and the parasites have sometimes become resistant to the available synthetic therapeutics, it is important to search for alternative sources of anti-parasitic drugs. Plants produce a high diversity of secondary metabolites with interesting biological activities, such as cytotoxic, anti-parasitic and anti-microbial properties. These drugs often interfere with central targets in parasites, such as DNA (intercalation, alkylation), membrane integrity, microtubules and neuronal signal transduction. Plant extracts and isolated secondary metabolites which can inhibit protozoan parasites, such as Plasmodium, Trypanosoma, Leishmania, Trichomonas and intestinal worms are discussed. The identified plants and compounds offer a chance to develop new drugs against parasitic diseases. Most of them need to be tested in more detail, especially in animal models and if successful, in clinical trials.


Subject(s)
Antiparasitic Agents/pharmacology , Plant Extracts/pharmacology , Plants, Medicinal/chemistry , Animals , Antiparasitic Agents/therapeutic use , DNA Damage , Humans , Parasites/drug effects , Parasites/genetics , Parasitic Diseases/drug therapy , Plant Extracts/therapeutic use , Tubulin Modulators/pharmacology , Tubulin Modulators/therapeutic use
16.
PLoS One ; 5(6): e11227, 2010 Jun 21.
Article in English | MEDLINE | ID: mdl-20574541

ABSTRACT

BACKGROUND: In malaria endemic countries, children who have experienced an episode of severe anaemia are at increased risk of a recurrence of anaemia. There is a need to find ways of protecting these at risk children from malaria and chemoprevention offers a potential way of achieving this objective. METHODS: During the 2003 and 2004 malaria transmission seasons, 1200 Gambian children with moderate or severe anaemia (Hb concentration <7 g/dL) were randomised to receive either monthly sulfadoxine-pyrimethamine (SP) or placebo until the end of the malaria transmission season in which they were enrolled, in a double-blind trial. All study subjects were treated with oral iron for 28 days and morbidity was monitored through surveillance at health centres. The primary endpoint was the proportion of children with moderate or severe anaemia at the end of the transmission season. Secondary endpoints included the incidence of clinical episodes of malaria during the surveillance period, outpatient attendances, the prevalence of parasitaemia and splenomegaly, nutritional status at the end of the malaria transmission season and compliance with the treatment regimen. RESULTS: The proportions of children with a Hb concentration of <7 g/dL at the end of the malaria transmission season were similar in the two study groups, 14/464 (3.0%) in children who received at least one dose of SP and 16/471 (3.4%) in those who received placebo, prevalence ratio 0.89 (0.44,1.8) P = 0.742. The protective efficacy of SP against episodes of clinical malaria was 53% (95% CI 37%, 65%). Treatment with SP was safe and well tolerated; no serious adverse events related to SP administration were observed. Mortality following discharge from hospital was low among children who received SP or placebo (6 in the SP group and 9 in the placebo group respectively). CONCLUSIONS: Intermittent treatment with SP did not reduce the proportion of previously anaemic children with moderate or severe anaemia at the end of the malaria season, although it prevented malaria. The combination of appropriate antimalarial treatment plus one month of iron supplementation and good access to healthcare during follow-up proved effective in restoring haemoglobin to an acceptable level in the Gambian setting. TRIAL REGISTRATION: ClinicalTrials.gov NCT00131716.


Subject(s)
Anemia/prevention & control , Hospitals , Patient Discharge , Pyrimethamine/pharmacology , Sulfadoxine/pharmacology , Animals , Antimalarials/administration & dosage , Antimalarials/adverse effects , Antimalarials/pharmacology , Drug Combinations , Drug Resistance/genetics , Drug-Related Side Effects and Adverse Reactions , Female , Gambia , Genetic Markers/genetics , Genotype , Humans , Malaria/prevention & control , Malaria/transmission , Male , Nutritional Status/drug effects , Parasites/drug effects , Parasites/genetics , Parasites/physiology , Patient Compliance , Pyrimethamine/administration & dosage , Pyrimethamine/adverse effects , Secondary Prevention , Sulfadoxine/administration & dosage , Sulfadoxine/adverse effects
18.
Parasitology ; 135(8): 943-53, 2008 Jul.
Article in English | MEDLINE | ID: mdl-18598576

ABSTRACT

Evolutionary and closer structural relationships are demonstrated by phylogenetic analysis, peptide prediction and molecular modelling between Solanum tuberosum apyrase, Schistosoma mansoni SmATPase 2 and Leishmania braziliensis NDPase. Specific protein domains are suggested to be potentially involved in the immune response, and also seem to be conserved during host and parasite co-evolution. Significant IgG antibody reactivity was observed in sera from patients with American cutaneous leishmaniasis (ACL) and schistosomiasis using potato apyrase as antigen in ELISA. S. mansoni adult worm or egg, L. braziliensis promastigote (Lb) and Trypanosoma cruzi epimastigote (EPI) have ATP diphosphohydrolases, and antigenic preparations of them were evaluated. In ACL patients, IgG seropositivity was about 43% and 90% for Lb and potato apyrase, respectively, while IgM was lower (40%) or IgG (100%) seropositivity for both soluble egg (SEA) and adult worm (SWAP) antigens was higher than that found for potato apyrase (IgM=10%; IgG=39%). In Chagas disease, IgG seropositivity for EPI and potato apyrase was 97% and 17%, respectively, while the IgM was low (3%) for both antigens. The study of the conserved domains from both parasite proteins and potato apyrase could lead to the development of new drug targets or molecular markers.


Subject(s)
Apyrase/immunology , Conserved Sequence/immunology , Epitope Mapping , Parasites/enzymology , Parasites/immunology , Solanum tuberosum/enzymology , Amino Acid Sequence , Animals , Antibodies, Protozoan/immunology , Apyrase/chemistry , Chagas Disease/blood , Chagas Disease/immunology , Humans , Leishmania braziliensis/enzymology , Leishmania braziliensis/genetics , Leishmania braziliensis/immunology , Leishmaniasis, Cutaneous/blood , Leishmaniasis, Cutaneous/immunology , Molecular Sequence Data , Parasites/genetics , Phylogeny , Protein Structure, Tertiary , Schistosoma mansoni/enzymology , Schistosoma mansoni/genetics , Schistosoma mansoni/immunology , Schistosomiasis/blood , Schistosomiasis/immunology , Sequence Alignment
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