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1.
Molecules ; 29(3)2024 Feb 01.
Article in English | MEDLINE | ID: mdl-38338429

ABSTRACT

Photodynamic inactivation (PDI) is a highly effective treatment that can eliminate harmful microorganisms in a variety of settings. This study explored the efficacy of a curcumin-rich extract, Curcuma L., (Cur)- and essential oil component, trans-cinnamaldehyde, (Ca)-mediated PDI against Listeria monocytogenes ATCC 15313 (Lm) including planktonic cells and established biofilms on silicone rubber (Si), polytetrafluoroethylene (PTFE), stainless steel 316 (SS), and polyethylene terephthalate (PET). Applying Ca- and Cur-mediated PDI resulted in planktonic cell reductions of 2.7 and 6.4 log CFU/cm2, respectively. Flow cytometric measurements (FCMs) coupled with CFDA/PI and TOTO®-1 staining evidenced that Ca- doubled and Cur-mediated PDI quadrupled the cell damage. Moreover, the enzymatic activity of Lm cells was considerably reduced by Cur-mediated PDI, indicating its superior efficacy. Photosensitization also affected Lm biofilms, but their reduction did not exceed 3.7 log CFU/cm2. Cur-mediated PDI effectively impaired cells on PET and PTFE, while Ca-mediated PDI caused no (TOTO®-1) or only slight (PI) cell damage, sparing the activity of cells. In turn, applying Ca-mediate PDI to Si largely diminished the enzymatic activity in Lm. SS contained 20% dead cells, suggesting that SS itself impacts Lm viability. In addition, the efficacy of Ca-mediated PDI was enhanced on the SS, leading to increased damage to the cells. The weakened viability of Lm on Si and SS could be linked to unfavorable interactions with the surfaces, resulting in a better effect of Ca against Lm. In conclusion, Cur demonstrated excellent photosensitizing properties against Lm in both planktonic and biofilm states. The efficacy of Ca was lower than that of Cur. However, Ca bears potent antibiofilm effects, which vary depending on the surface on which Lm resides. Therefore, this study may help identify more effective plant-based compounds to combat L. monocytogenes in an environmentally sustainable manner.


Subject(s)
Acrolein/analogs & derivatives , Listeria monocytogenes , Quinolinium Compounds , Thiazoles , Curcuma , Anti-Bacterial Agents/pharmacology , Biofilms , Polytetrafluoroethylene
2.
J Ethnopharmacol ; 270: 113848, 2021 Apr 24.
Article in English | MEDLINE | ID: mdl-33485977

ABSTRACT

ETHNOPHARMACOLOGICAL RELEVANCE: Cinobufacini is extracted from the skins and parotid venom glands of the toad for treating symptoms like swelling and pain in ancient times. Nowadays, cinobifucini injection has also achieved satisfactory therapeutic effects on hepatocellular carcinoma (HCC) in China. AIM OF THE STUDY: Our previous work found that bufothionine, an alkaloid abundant in cinobufacini injection, induced mitochondria-mediated apoptosis. In this work, the underlying effects of bufothionine on autophagy in HCC and its possible dependent pathway were investigated. METHODS: CCK-8 and Hoechst staining assays were performed to verify effects of drugs on proliferation and apoptosis of SMMC7721 cell. H22-tumor-bearing mice model was established by inoculating ascites fluid. HE staining was used to observe pathological changes in liver and tumor tissues. ELISA and Western blot experiments were conducted to investigate IL-6/JAK2/STAT3 signaling pathway. The effects of drugs on expressions of autophagic relative proteins were investigated by Western blot in vitro and in vivo. RESULTS: In vitro, CCK-8 and Hoechst staining assays showed that bufothionine inhibited SMMC7721 cell proliferation and promoted apoptosis at 100 µM. In vivo, bufothionine relieved symptoms of H22-tumor-bearing mice and exerted anti-inflammation activity. ELISA and Western blot demonstrated that bufothionine significantly reduced serum IL-6 concentration, suppressed p-Stat3tyr705, p-Stat3ser727 and Jak2 expressions in tumor tissues and upregulated Atg5, Atg7 and LC3Ⅱ expressions in SMMC7721 cell and H22 tumor. CONCLUSION: This is the first report showing that bufothionine might induce autophagy in HCC by inhibiting JAK2/STAT3 pathway, presenting a possible anti-cancer mechanism of bufothionine in cinobufacini injection.


Subject(s)
Antineoplastic Agents, Phytogenic/pharmacology , Autophagy/drug effects , Bufanolides/pharmacology , Indole Alkaloids/pharmacology , Liver Neoplasms, Experimental/drug therapy , Neoplasms/pathology , Quinolinium Compounds/pharmacology , Signal Transduction/drug effects , Animals , Antineoplastic Agents, Phytogenic/therapeutic use , Apoptosis/drug effects , Bufanolides/chemistry , Bufanolides/therapeutic use , Cell Line, Tumor , Cell Proliferation/drug effects , Humans , Indole Alkaloids/therapeutic use , Interleukin-6/antagonists & inhibitors , Janus Kinase 2/antagonists & inhibitors , Janus Kinase 2/metabolism , Liver Neoplasms, Experimental/metabolism , Liver Neoplasms, Experimental/pathology , Male , Mice , Neoplasms/metabolism , Quinolinium Compounds/therapeutic use , STAT3 Transcription Factor/antagonists & inhibitors , STAT3 Transcription Factor/metabolism
3.
Nucleic Acids Res ; 49(2): e8, 2021 01 25.
Article in English | MEDLINE | ID: mdl-33231685

ABSTRACT

Whole-genome mapping technologies have been developed as a complementary tool to provide scaffolds for genome assembly and structural variation analysis (1,2). We recently introduced a novel DNA labeling strategy based on a CRISPR-Cas9 genome editing system, which can target any 20bp sequences. The labeling strategy is specifically useful in targeting repetitive sequences, and sequences not accessible to other labeling methods. In this report, we present customized mapping strategies that extend the applications of CRISPR-Cas9 DNA labeling. We first design a CRISPR-Cas9 labeling strategy to interrogate and differentiate the single allele differences in NGG protospacer adjacent motifs (PAM sequence). Combined with sequence motif labeling, we can pinpoint the single-base differences in highly conserved sequences. In the second strategy, we design mapping patterns across a genome by selecting sets of specific single-guide RNAs (sgRNAs) for labeling multiple loci of a genomic region or a whole genome. By developing and optimizing a single tube synthesis of multiple sgRNAs, we demonstrate the utility of CRISPR-Cas9 mapping with 162 sgRNAs targeting the 2Mb Haemophilus influenzae chromosome. These CRISPR-Cas9 mapping approaches could be particularly useful for applications in defining long-distance haplotypes and pinpointing the breakpoints in large structural variants in complex genomes and microbial mixtures.


Subject(s)
CRISPR-Cas Systems , Chromosome Mapping/methods , Chromosomes, Bacterial/genetics , Haemophilus influenzae/genetics , RNA, Guide, Kinetoplastida/genetics , Alleles , Base Sequence , Benzoxazoles/analysis , Computer Simulation , Conserved Sequence/genetics , DNA-Directed RNA Polymerases , Drug Resistance, Bacterial/genetics , Fluorescent Dyes/analysis , Gene Editing/methods , Genome, Bacterial , Genome, Human , Haemophilus influenzae/drug effects , Haplotypes/genetics , Humans , Lab-On-A-Chip Devices , Nalidixic Acid/pharmacology , Novobiocin/pharmacology , Nucleotide Motifs/genetics , Polymorphism, Single Nucleotide , Quinolinium Compounds/analysis , RNA, Guide, Kinetoplastida/chemical synthesis , Repetitive Sequences, Nucleic Acid/genetics , Sequence Alignment , Staining and Labeling/methods , Viral Proteins
4.
Sci Rep ; 9(1): 13116, 2019 09 11.
Article in English | MEDLINE | ID: mdl-31511591

ABSTRACT

A unique aspect of electrostimulation (ES) with nanosecond electric pulses (nsEP) is the inhibition of effects when the polarity is reversed. This bipolar cancellation feature makes bipolar nsEP less efficient at biostimulation than unipolar nsEP. We propose to minimize stimulation near pulse-delivering electrodes by applying bipolar nsEP, whereas the superposition of two phase-shifted bipolar nsEP from two independent sources yields a biologically-effective unipolar pulse remotely. This is accomplished by electrical compensation of all nsEP phases except the first one, resulting in the restoration of stimulation efficiency due to cancellation of bipolar cancellation (CANCAN-ES). We experimentally proved the CANCAN-ES paradigm by measuring YO-PRO-1 dye uptake in CHO-K1 cells which were permeabilized by multiphasic nsEP (600 ns per phase) from two generators; these nsEP were synchronized either to overlap into a unipolar pulse remotely from electrodes (CANCAN), or not to overlap (control). Enhancement of YO-PRO-1 entry due to CANCAN was observed in all sets of experiments and reached ~3-fold in the center of the gap between electrodes, exactly where the unipolar pulse was formed, and equaled the degree of bipolar cancellation. CANCAN-ES is promising for non-invasive deep tissue stimulation, either alone or combined with other remote stimulation techniques to improve targeting.


Subject(s)
Cell Membrane Permeability , Cell Membrane/metabolism , Electric Stimulation/methods , Electroporation/methods , Nanotechnology/methods , Animals , Benzoxazoles/chemistry , CHO Cells , Cell Membrane/radiation effects , Cricetinae , Cricetulus , Quinolinium Compounds/chemistry , Time-Lapse Imaging
5.
Bioelectromagnetics ; 39(6): 441-450, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29984850

ABSTRACT

Nanosecond electric pulse (nsEP) exposure generates an array of physiological effects. The extent of these effects is impacted by whether the nsEP is a unipolar (UP) or bipolar (BP) exposure. A 600 ns pulse can generate 71% more YO-PRO-1 uptake compared to a 600 ns + 600 ns pulse exposure. This observation is termed "bipolar cancellation" (BPC) because despite the BP nsEP consisting of an additional 600 ns pulse, it generates reduced membrane perturbation. BPC is achieved by varying pulse amplitudes, and symmetrical and asymmetric pulse widths. The effect appears to reverse by increasing the interphase interval between symmetric BP pulses, suggesting membrane recovery is a BPC factor. To date, the impact of the interphase interval between asymmetrical BP and other BPC-inducing symmetrical BP nsEPs has not been fully explored. Additionally, interpulse intervals beyond 50 µs have not been explored to understand the impact of time between the BP nsEP phases. Here, we surveyed different interphase intervals among symmetrical and asymmetrical BP nsEPs to monitor their impact on BPC of YO-PRO-1 uptake. We identified that a 10 microsecond (ms) interphase interval within a symmetrical 600 ns + 600 ns, and 900 ns + 900 ns pulse can resolve BPC. Furthermore, the interphase interval to resolve asymmetric BPC from a 300 ns + 900 ns pulse versus 600 ns pulse exposure is greater (<10 ms) compared to symmetrical BP nsEPs. From these findings, we extended on our conceptual model that BPC is balanced by localized charging and discharging events across the membrane. Bioelectromagnetics. 39:441-450, 2018. Published 2018. This article is a U.S. Government work and is in the public domain in the USA.


Subject(s)
Cell Membrane/metabolism , Electric Stimulation/methods , Animals , Benzoxazoles/pharmacokinetics , CHO Cells , Cell Membrane Permeability , Cricetulus , Fluorescent Dyes/pharmacokinetics , Microscopy, Confocal , Quinolinium Compounds/pharmacokinetics , Time Factors
6.
Biochemistry ; 56(6): 824-832, 2017 Feb 14.
Article in English | MEDLINE | ID: mdl-28121423

ABSTRACT

Nicotinamide N-methyltransferase (NNMT) is an important biotransforming enzyme that catalyzes the transfer of a labile methyl group from the ubiquitous cofactor S-5'-adenosyl-l-methionine (SAM) to endogenous and exogenous small molecules to form methylated end products. NNMT has been implicated in a number of chronic disease conditions, including metabolic disorders, cardiovascular disease, cancer, osteoarthritis, kidney disease, and Parkinson's disease. We have developed a novel noncoupled fluorescence-based methyltransferase assay that allows direct ultrasensitive real-time detection of the NNMT reaction product 1-methylquinolinium. This is the first assay reported to date to utilize fluorescence spectroscopy to directly monitor NNMT product formation and activity in real time. This assay provided accurate kinetic data that allowed detailed comparative analysis of the NNMT reaction mechanism and kinetic parameters. A reaction model based on a random bireactant mechanism produced global curve fits that were most consistent with steady-state initial velocity data collected across an array of substrate concentrations. On the basis of the reaction mechanism, each substrate could independently bind to the NNMT apoenzyme; however, both substrates bound to the complementary binary complexes with an affinity ∼20-fold stronger compared to their binding to the apoenzyme. This reaction mechanism implies either substrate-induced conformational changes or bireactant intermolecular interactions may stabilize the binding of the substrate to the binary complex and formation of the ternary complex. Importantly, this assay could rapidly generate concentration response curves for known NNMT inhibitors, suggesting its applicability for high-throughput screening of chemical libraries to identify novel NNMT inhibitors. Furthermore, our novel assay potentially offers a robust detection technology for use in SAM substrate competition assays for the discovery and development of SAM-dependent methyltransferase inhibitors.


Subject(s)
Models, Molecular , Nicotinamide N-Methyltransferase/metabolism , Apoenzymes/antagonists & inhibitors , Apoenzymes/chemistry , Apoenzymes/genetics , Apoenzymes/metabolism , Biocatalysis/drug effects , Calibration , Enzyme Inhibitors/pharmacology , High-Throughput Screening Assays , Humans , Limit of Detection , Methylation/drug effects , Nicotinamide N-Methyltransferase/antagonists & inhibitors , Nicotinamide N-Methyltransferase/chemistry , Nicotinamide N-Methyltransferase/genetics , Protein Conformation , Protein Refolding/drug effects , Quinolinium Compounds/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Reproducibility of Results , S-Adenosylmethionine/metabolism , Spectrometry, Fluorescence
7.
Br J Pharmacol ; 173(1): 177-90, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26454020

ABSTRACT

BACKGROUND AND PURPOSE: Small conductance calcium-activated potassium (KCa 2.x) channels have a widely accepted canonical function in regulating cellular excitability. In this study, we address a potential non-canonical function of KCa 2.x channels in breast cancer cell survival, using in vitro models. EXPERIMENTAL APPROACH: The expression of all KCa 2.x channel isoforms was initially probed using RT-PCR, Western blotting and microarray analysis in five widely studied breast cancer cell lines. In order to assess the effect of pharmacological blockade and siRNA-mediated knockdown of KCa 2.x channels on these cell lines, we utilized MTS proliferation assays and also followed the corresponding expression of apoptotic markers. KEY RESULTS: All of the breast cancer cell lines, regardless of their lineage or endocrine responsiveness, were highly sensitive to KCa 2.x channel blockade. UCL1684 caused cytotoxicity, with LD50 values in the low nanomolar range, in all cell lines. The role of KCa 2.x channels was confirmed using pharmacological inhibition and siRNA-mediated knockdown. This reduced cell viability and also reduced expression of Bcl-2 but increased expression of active caspase-7 and caspase-9. Complementary to these results, a variety of cell lines can be protected from apoptosis induced by staurosporine using the KCa 2.x channel activator CyPPA. CONCLUSIONS AND IMPLICATIONS: In addition to a well-established role for KCa 2.x channels in migration, blockade of these channels was potently cytotoxic in breast cancer cell lines, pointing to modulation of KCa 2.x channels as a potential therapeutic approach to breast cancer.


Subject(s)
Breast Neoplasms/metabolism , Breast Neoplasms/pathology , Gene Knockdown Techniques , Small-Conductance Calcium-Activated Potassium Channels/deficiency , Alkanes/toxicity , Apoptosis/drug effects , Apoptosis Regulatory Proteins/biosynthesis , Breast Neoplasms/genetics , Cell Line, Tumor , Cell Proliferation/drug effects , Dose-Response Relationship, Drug , Humans , Lethal Dose 50 , Protein Isoforms/biosynthesis , Protein Isoforms/deficiency , Pyrazoles/pharmacology , Pyrimidines/pharmacology , Quinolinium Compounds/toxicity , RNA, Small Interfering/pharmacology , Small-Conductance Calcium-Activated Potassium Channels/biosynthesis , Small-Conductance Calcium-Activated Potassium Channels/genetics , Small-Conductance Calcium-Activated Potassium Channels/metabolism , Staurosporine/antagonists & inhibitors , Staurosporine/pharmacology
8.
Methods ; 88: 81-8, 2015 Oct 15.
Article in English | MEDLINE | ID: mdl-25637032

ABSTRACT

As proof-of-principle for generating superresolution structural information from DNA we applied a method of localization microscopy utilizing photoblinking comparing intercalating dye YOYO-1 against minor groove binding dye SYTO-13, using a bespoke multicolor single-molecule fluorescence microscope. We used a full-length ∼49 kbp λ DNA construct possessing oligo inserts at either terminus allowing conjugation of digoxigenin and biotin at opposite ends for tethering to a glass coverslip surface and paramagnetic microsphere respectively. We observed stochastic DNA-bound dye photoactivity consistent with dye photoblinking as opposed to binding/unbinding events, evidenced through both discrete simulations and continuum kinetics analysis. We analyzed dye photoblinking images of immobilized DNA molecules using superresolution reconstruction software from two existing packages, rainSTORM and QuickPALM, and compared the results against our own novel home-written software called ADEMS code. ADEMS code generated lateral localization precision values of 30-40 nm and 60-70 nm for YOYO-1 and SYTO-13 respectively at video-rate sampling, similar to rainSTORM, running more slowly than rainSTORM and QuickPALM algorithms but having a complementary capability over both in generating automated centroid distribution and cluster analyses. Our imaging system allows us to observe dynamic topological changes to single molecules of DNA in real-time, such as rapid molecular snapping events. This will facilitate visualization of fluorescently-labeled DNA molecules conjugated to a magnetic bead in future experiments involving newly developed magneto-optical tweezers combined with superresolution microscopy.


Subject(s)
Benzoxazoles/chemistry , DNA, Viral/chemistry , Fluorescent Dyes/chemistry , Microscopy, Fluorescence/methods , Molecular Imaging/methods , Quinolinium Compounds/chemistry , Software , Algorithms , Bacteriophage lambda/genetics , Kinetics , Organic Chemicals/chemistry
9.
Int J Toxicol ; 33(4): 282-287, 2014 07.
Article in English | MEDLINE | ID: mdl-24819520

ABSTRACT

N1-Benzylated dihydroquinolin-6-ols and their corresponding esters display exceptional activity against African trypanosomes in vitro, and administration of members of this class of compounds to trypanosome-infected mice results in cures in a first-stage African trypanosomiasis model. Since a quinone imine intermediate has been implicated in the antiparasitic mechanism of action of these compounds, evaluation of the hepatotoxic, mutagenic, and methemoglobin-promoting effects of these agents was performed. 1-Benzyl-1,2-dihydro-2,2,4-trimethylquinolin-6-ol hydrochloride and 1-benzyl-1,2-dihydro-2,2,4-trimethylquinolin-6-yl acetate showed outstanding in vitro selectivity for Trypanosoma brucei compared to the HepG2, Hep3B, Huh7, and PLC5 hepatocyte cell lines. 1-Benzyl-1,2-dihydro-2,2,4-trimethylquinolin-6-ol hydrochloride and 1-(2-methoxybenzyl)-1,2-dihydro-2,2,4-trimethylquinolin-6-yl acetate were not mutagenic when screened in the Ames assay, with or without metabolic activation. The latter 2 compounds promoted time- and dose-dependent formation of methemoglobin when incubated in whole human blood, but such levels were below those typically required to produce symptoms of methemoglobinemia in humans. Although compounds capable of quinone imine formation require careful evaluation, these in vitro studies indicate that antitrypanosomal dihydroquinolines merit further study as drug candidates against the neglected tropical disease human African trypanosomiasis.


Subject(s)
Acetates/adverse effects , Drugs, Investigational/adverse effects , Hepatocytes/drug effects , Methemoglobin/metabolism , Quinolines/adverse effects , Quinolinium Compounds/adverse effects , Trypanocidal Agents/adverse effects , Acetates/metabolism , Acetates/pharmacology , Activation, Metabolic , Animals , Cell Line , Cell Survival/drug effects , Drug Design , Drug Evaluation, Preclinical , Drugs, Investigational/chemical synthesis , Drugs, Investigational/metabolism , Drugs, Investigational/pharmacology , Hemoglobins/chemistry , Hemoglobins/metabolism , Hepatocytes/enzymology , Hepatocytes/metabolism , Humans , Inhibitory Concentration 50 , Kinetics , Methemoglobin/chemistry , Mutagenicity Tests , Oxidation-Reduction , Quinolines/chemical synthesis , Quinolines/metabolism , Quinolines/pharmacology , Quinolinium Compounds/metabolism , Quinolinium Compounds/pharmacology , Rats , Trypanocidal Agents/chemical synthesis , Trypanocidal Agents/metabolism , Trypanocidal Agents/pharmacology , Trypanosoma brucei brucei/drug effects , Trypanosoma brucei brucei/growth & development
10.
Phytomedicine ; 21(6): 877-82, 2014 May 15.
Article in English | MEDLINE | ID: mdl-24680618

ABSTRACT

The quinolinium chloride salt of 8-hydroxyqinolinecarbaldehyde (2-Formyl-8-hydroxy-quinolinium chloride) was prepared as Galipea longiflora alkaloid analogue and its anticancer activity was evaluated both in vitro and in vivo. This chloride salt was found to show certain degree of selectivity between hepatoma cells and normal hepatocytes in vitro. Athymic nude mice Hep3B xenograft model further demonstrated that this 2-Formyl-8-hydroxy-quinolinium chloride could execute strong anti-tumour activity with the identification of extensive necrotic feature from the tumour xenograft and limited adverse toxicological effect.


Subject(s)
Alkaloids/therapeutic use , Antineoplastic Agents, Phytogenic/therapeutic use , Carcinoma, Hepatocellular/drug therapy , Phytotherapy , Plant Extracts/therapeutic use , Quinolinium Compounds/therapeutic use , Rutaceae/chemistry , Alkaloids/pharmacokinetics , Alkaloids/pharmacology , Animals , Antineoplastic Agents, Phytogenic/pharmacokinetics , Antineoplastic Agents, Phytogenic/pharmacology , Chlorides/pharmacokinetics , Chlorides/pharmacology , Chlorides/therapeutic use , Hepatocytes/drug effects , Heterografts , In Vitro Techniques , Mice, Inbred C57BL , Mice, Nude , Necrosis , Plant Extracts/pharmacokinetics , Plant Extracts/pharmacology , Quinolinium Compounds/pharmacokinetics , Quinolinium Compounds/pharmacology , Salts
11.
J Biomol Struct Dyn ; 32(7): 1155-63, 2014.
Article in English | MEDLINE | ID: mdl-23829319

ABSTRACT

The oxazole homodimer YOYO-1 has served as a valuable tool for the detection and quantification of nucleic acids. While the base specificity and selectivity of binding of YOYO-1 has been researched to some extent, the effect of unorthodox nucleic acid conformations on dye binding has received relatively less attention. In this work, we attempt to correlate the quadruplex-forming ability of G-rich sequences with binding of YOYO-1. Oligonucleotides differing in the number of tandem G repeats, total length, and length of loop sequence were evaluated for their ability to form quadruplexes in presence of sodium (Na(+)) or potassium (K(+)) ions. The fluorescence behavior of YOYO-1 upon binding such G-rich sequences was also ascertained. A distinct correlation was observed between the strength and propensity of quadruplex formation, and the affinity of YOYO-1 to bind such sequences. Specifically, as exemplified by the oligonucleotides 5'-G4T2G4-3' and 5'-G3TG3TG3-3', sequences possessing longer G-rich regions and shorter loop sequences formed stronger quadruplexes in presence of K(+) which translated to weaker binding of YOYO-1. The dependence of binding of YOYO-1 on sequence and structural features of G-rich DNA has not been explored previously and such studies are expected to aid in more effective interpretation of applications involving the fluorophore.


Subject(s)
Benzoxazoles/chemistry , DNA/chemistry , Guanine/chemistry , Intercalating Agents/chemistry , Quinolinium Compounds/chemistry , G-Quadruplexes , Models, Molecular , Oligonucleotides/chemistry
12.
Biochemistry ; 52(51): 9269-74, 2013 Dec 23.
Article in English | MEDLINE | ID: mdl-24358934

ABSTRACT

RNA-protein interactions are vital throughout the HIV-1 life cycle for the successful production of infectious virus particles. One such essential RNA-protein interaction occurs between the full-length genomic viral RNA and the major structural protein of the virus. The initial interaction is between the Gag polyprotein and the viral RNA packaging signal (psi or Ψ), a highly conserved RNA structural element within the 5'-UTR of the HIV-1 genome, which has gained attention as a potential therapeutic target. Here, we report the application of a target-based assay to identify small molecules, which modulate the interaction between Gag and Ψ. We then demonstrate that one such molecule exhibits potent inhibitory activity in a viral replication assay. The mode of binding of the lead molecules to the RNA target was characterized by ¹H NMR spectroscopy.


Subject(s)
Anti-HIV Agents/pharmacology , HIV-1/drug effects , RNA, Spliced Leader/drug effects , RNA, Viral/antagonists & inhibitors , Ribonucleoproteins/antagonists & inhibitors , Virus Replication/drug effects , gag Gene Products, Human Immunodeficiency Virus/antagonists & inhibitors , Anti-HIV Agents/adverse effects , Anti-HIV Agents/chemistry , Binding Sites , Cell Survival/drug effects , Drug Evaluation, Preclinical , HEK293 Cells , HIV Infections/drug therapy , HIV-1/physiology , HeLa Cells , Humans , Models, Molecular , Molecular Targeted Therapy , Nucleic Acid Conformation/drug effects , Nucleic Acid Denaturation/drug effects , Osmolar Concentration , Quinolinium Compounds/adverse effects , Quinolinium Compounds/chemistry , Quinolinium Compounds/pharmacology , RNA, Viral/chemistry , RNA, Viral/metabolism , Ribonucleoproteins/chemistry , Ribonucleoproteins/metabolism , Schiff Bases/adverse effects , Schiff Bases/chemistry , Schiff Bases/pharmacology , Small Molecule Libraries , gag Gene Products, Human Immunodeficiency Virus/metabolism
13.
Molecules ; 18(9): 10648-70, 2013 Sep 02.
Article in English | MEDLINE | ID: mdl-24002140

ABSTRACT

In this study, a series of twenty-five ring-substituted 4-arylamino-7-chloroquinolinium chlorides were prepared and characterized. The compounds were tested for their activity related to inhibition of photosynthetic electron transport (PET) in spinach (Spinacia oleracea L.) chloroplasts and also primary in vitro screening of the synthesized compounds was performed against mycobacterial species. 4-[(2-Bromophenyl)amino]-7-chloroquinolinium chloride showed high biological activity against M. marinum, M. kansasii, M. smegmatis and 7-chloro-4-[(2-methylphenyl)amino]quinolinium chloride demonstrated noteworthy biological activity against M. smegmatis and M. avium subsp. paratuberculosis. The most effective compounds demonstrated quite low toxicity (LD50 > 20 µmol/L) against the human monocytic leukemia THP-1 cell line within preliminary in vitro cytotoxicity screening. The tested compounds were found to inhibit PET in photosystem II. The PET-inhibiting activity expressed by IC50 value of the most active compound 7-chloro-4-[(3-trifluoromethylphenyl)amino]quinolinium chloride was 27 µmol/L and PET-inhibiting activity of ortho-substituted compounds was significantly lower than this of meta- and para-substituted ones. The structure-activity relationships are discussed for all compounds.


Subject(s)
Antitubercular Agents/pharmacology , Quinolinium Compounds/pharmacology , Antitubercular Agents/chemical synthesis , Cell Line , Cell Survival/drug effects , Chlorides/chemical synthesis , Chlorides/pharmacology , Chloroplasts/drug effects , Chloroplasts/metabolism , Drug Evaluation, Preclinical , Electron Transport/drug effects , Humans , Inhibitory Concentration 50 , Microbial Sensitivity Tests , Mycobacterium/drug effects , Photosynthesis/drug effects , Quinolinium Compounds/chemical synthesis , Solubility , Spinacia oleracea/drug effects , Spinacia oleracea/metabolism , Structure-Activity Relationship
14.
Chem Commun (Camb) ; 49(45): 5132-4, 2013 Jun 07.
Article in English | MEDLINE | ID: mdl-23536036

ABSTRACT

A simple electron donor-acceptor linked dyad, the 2-phenyl-4-(1-naphthyl)quinolinium ion (QuPh(+)-NA), was incorporated into nanosized mesoporous silica-alumina to form a composite, which is highly dispersed in water and acts as an efficient and robust photocatalyst for the reduction of O2 by oxalate to produce hydrogen peroxide with a quantum yield of 10%.


Subject(s)
Aluminum Oxide/chemistry , Quinolinium Compounds/chemistry , Silicon Dioxide/chemistry , Water/chemistry , Catalysis , Electron Transport , Electrons , Ions/chemistry , Light , Oxidation-Reduction , Oxygen/chemistry
15.
Anal Biochem ; 426(1): 13-21, 2012 Jul 01.
Article in English | MEDLINE | ID: mdl-22484041

ABSTRACT

Single-molecule fluorescence imaging of DNA-binding proteins has enabled detailed investigations of their interactions. However, the intercalating dyes used to visually locate DNA molecules have the undesirable effect of photochemically damaging the DNA through radical intermediaries. Unfortunately, this damage occurs as single-strand breaks (SSBs), which are visually undetectable but can heavily influence protein behavior. We investigated the formation of SSBs on DNA molecules by the dye YOYO-1 using complementary single-molecule imaging and gel electrophoresis-based damage assays. The single-molecule assay imaged hydrodynamically elongated lambda DNA, enabling the real-time detection of double-strand breaks (DSBs). The gel assay, which used supercoiled plasmid DNA, was sensitive to both SSBs and DSBs. This enabled the quantification of SSBs that precede DSB formation. Using the parameters determined from the gel damage assay, we applied a model of stochastic DNA damage to the time-resolved DNA breakage data, extracting the rates of single-strand breakage at two dye staining ratios and measuring the damage reduction from the radical scavengers ascorbic acid and ß-mercaptoethanol. These results enable the estimation of the number of SSBs that occur during imaging and are scalable over a wide range of laser intensities used in fluorescence microscopy.


Subject(s)
DNA/analysis , Fluorescent Dyes/chemistry , Intercalating Agents/chemistry , Microscopy, Fluorescence , Ascorbic Acid/chemistry , Benzoxazoles/chemistry , DNA Breaks, Double-Stranded , DNA Breaks, Single-Stranded , Free Radical Scavengers/chemistry , Kinetics , Lasers , Quinolinium Compounds/chemistry
16.
Br J Pharmacol ; 167(1): 48-66, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22506590

ABSTRACT

BACKGROUND AND PURPOSE: In mammalian cells, the anti-parasitic drug ivermectin is known as a positive allosteric modulator of the ATP-activated ion channel P2X4 and is used to discriminate between P2X4- and P2X7-mediated cellular responses. In this paper we provide evidence that the reported isoform selectivity of ivermectin is a species-specific phenomenon. EXPERIMENTAL APPROACH: Complementary electrophysiological and fluorometric methods were applied to evaluate the effect of ivermectin on recombinantly expressed and on native P2X7 receptors. A biophysical characterization of ionic currents and of the pore dilation properties is provided. KEY RESULTS: Unexpectedly, ivermectin potentiated currents in human monocyte-derived macrophages that endogenously express hP2X7 receptors. Likewise, currents and [Ca(2+) ](i) influx through recombinant human (hP2X7) receptors were potently enhanced by ivermectin at submaximal or saturating ATP concentrations. Since intracellular ivermectin did not mimic or prevent its activity when applied to the bath solution, the binding site of ivermectin on hP2X7 receptors appears to be accessible from the extracellular side. In contrast to currents through P2X4 receptors, ivermectin did not cause a delay in hP2X7 current decay upon ATP removal. Interestingly, NMDG(+) permeability and Yo-Pro-1 uptake were not affected by ivermectin. On rat or mouse P2X7 receptors, ivermectin was only poorly effective, suggesting a species-specific mode of action. CONCLUSIONS AND IMPLICATIONS: The data indicate a previously unrecognized species-specific modulation of human P2X7 receptors by ivermectin that should be considered when using this cell-biological tool in human cells and tissues.


Subject(s)
Antiparasitic Agents/pharmacology , Ivermectin/pharmacology , Receptors, Purinergic P2X7/physiology , Adenosine Triphosphate/pharmacology , Allosteric Regulation/drug effects , Animals , Astrocytes/drug effects , Astrocytes/physiology , Benzoxazoles/metabolism , Calcium/physiology , Cells, Cultured , Fluorescent Dyes/metabolism , HEK293 Cells , Humans , Macrophages/drug effects , Macrophages/physiology , Mice , Mice, Inbred C57BL , Monocytes/cytology , Quinolinium Compounds/metabolism , Rats , Rats, Wistar , Receptors, Purinergic P2X4/physiology , Species Specificity
17.
J Ethnopharmacol ; 141(2): 692-700, 2012 Jun 01.
Article in English | MEDLINE | ID: mdl-22210051

ABSTRACT

ETHNOPHARMACOLOGICAL RELEVANCE: Cinobufacini has been traditionally used in China for the treatment of tumor since hundreds years ago. For recent years, its modern preparation,cinobifucini injection has also obtained satisfactory therapeutic functions for cancer. MATERIALS AND METHODS: High performance liquid chromatography (HPLC) analysis was applied to determine the content of cinobufagin, resibufogenin and bufothionine in cinobufacin extract liquid and injection; MTT assay and flow cytometric analysis were also respectively used to study the effect of cinobufacini extract liquid, injection and three chemical structures on cells and cell cycles. RESULTS: HPLC results demonstrated that in cinobufacini extract liquid three ingredients (cinobufagin, resibufogenin and bufothionine) were all monitored while in cinofacini injection only bufothinone was detected; MTT assays showed bufothionine could obviously inhibit the proliferation of human hepatocellular carcinoma cell lines such as SMMC-7721 and BEL-7402 in a dose- and time-dependent manner as well as cinobufagin and resibufogenin; further flow cytometric analysis indicated obvious increases in G2/M phase and decrease in G0/G1 phase when SMMC-7721 cell line exposure to bufothionine (480 µg/ml). CONCLUSIONS: These results suggested bufothionine could be involved in treatment of human cancer for cinobufacini injection and the mechanism might be relative to induce G2/M phase cell cycle arrest.


Subject(s)
Amphibian Venoms/pharmacology , Antineoplastic Agents/pharmacology , Carcinoma, Hepatocellular/pathology , Cell Proliferation/drug effects , Indole Alkaloids/pharmacology , Liver Neoplasms/pathology , Quinolinium Compounds/pharmacology , Amphibian Venoms/administration & dosage , Amphibian Venoms/chemistry , Antineoplastic Agents/isolation & purification , Bufanolides/isolation & purification , Bufanolides/pharmacology , Cell Line, Tumor , Chromatography, High Pressure Liquid , Dose-Response Relationship, Drug , Flow Cytometry , G2 Phase Cell Cycle Checkpoints/drug effects , Humans , Indole Alkaloids/isolation & purification , Injections , Medicine, Chinese Traditional , Quinolinium Compounds/isolation & purification , Time Factors
18.
Forensic Sci Int ; 219(1-3): 208-14, 2012 Jun 10.
Article in English | MEDLINE | ID: mdl-22284074

ABSTRACT

Conventional fingermark powders rely on contrast induced by absorption/reflection (e.g. black powder) or luminescence in the visible region (e.g. Blitz Green(®)). In most cases, these powders provide sufficient contrast; however, in some circumstances surface characteristics can interfere with the visualisation of powdered fingermarks. Visualisation in the near infra-red (NIR) region, however, has been shown to eliminate interferences commonly encountered in the visible region. In this study, a mixture of rhodamine 6G and the NIR laser dye styryl 11 (STaR 11) was coated onto an aluminium oxide nanopowder and then mixed with silver magnetic powder to develop and visualise fingermarks in the NIR. When compared to Blitz Green(®), it was determined that the STaR 11 magnetic powder was better suited for marks deposited on textured surfaces and for older marks, whereas Blitz Green(®) performed better on smooth glossy surfaces. The ability of the STaR 11 mixed dye formulation to be visualised in both the visible and NIR regions also provides a significant advantage over conventional luminescent fingermark powders.


Subject(s)
Aniline Compounds , Dermatoglyphics , Fluorescent Dyes , Quinolinium Compounds , Rhodamines , Aluminum Oxide/chemistry , Humans , Light , Luminescence , Nanoparticles , Powders , Silver , Surface Properties
19.
J Pharm Pharm Sci ; 14(1): 36-45, 2011.
Article in English | MEDLINE | ID: mdl-21501551

ABSTRACT

PURPOSE: To develop an HPLC-UV method for determination of a novel antitrypanosomal compound (OSU-36) and its ester prodrug (OSU-40) in rat plasma and to apply the method for pharmacokinetic evaluation of both compounds in rats. METHODS: Since an attempt to assay for OSU-36 and OSU-40 in non-stabilized plasma resulted in highly non-linear calibration curves and poor sensitivity due to instability of the compounds, the plasma was stabilized using paraoxon and ascorbic acid. The sample treatment included protein precipitation by acetonitrile; evaporation; reconstitution with acetonitrile and filtration. The chromatography conditions included Xterra RP18 3.5 µm 4.6X100 mm column and gradient mobile phase system of acetonitrile-water. RESULTS: The limits of quantification (LOQ) were 50 ng/mL and 40 ng/mL for OSU-36 and OSU-40, respectively. The intra- and interday precision and accuracies were below 13% for low, medium and high quality control samples for both compounds. While OSU-40 has been stable in all tested handling conditions, OSU-36 was unstable in plasma after 20 days storage in -80 °C or 4h 28 °C storage. The developed method has been applied for a pharmacokinetic study in rats which revealed that an ester prodrug OSU-40 is rapidly converted to OSU-36 within the plasma compartment by plasma esterases. OSU-36, in turn, relatively quickly undergoes oxidative metabolism, including within the plasma compartment. CONCLUSIONS: A supplementation of rat plasma with an esterase inhibitor to prevent degradation of ester prodrug (OSU-40), and with antioxidant to prevent oxidation of OSU-36, is necessary for reliable determination of both compounds. Due to limited stability of OSU-36 in stabilized rat plasma, long-term storage of samples or prolonged handling in room temperature conditions is not recommended.


Subject(s)
Acetates/pharmacokinetics , Chromatography, High Pressure Liquid/methods , Quinolinium Compounds/pharmacokinetics , Trypanocidal Agents/pharmacokinetics , Animals , Ascorbic Acid/chemistry , Calibration , Drug Stability , Drug Storage , Male , Paraoxon/chemistry , Prodrugs , Rats , Rats, Sprague-Dawley , Reproducibility of Results , Temperature
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