Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 32
Filter
1.
Sci Rep ; 14(1): 9318, 2024 04 23.
Article in English | MEDLINE | ID: mdl-38654024

ABSTRACT

Endophytes of Panax have the potential to produce their host plant secondary metabolites, ginsenosides. Panax sokpayensis, an endemic traditional medicinal plant of the Sikkim Himalayas was explored for the isolation of endophytic fungi. In the present study, we have isolated 35 endophytic fungal cultures from the rhizome of P. sokpayensis and screened for ginsenosides production by HPLC by comparing the peak retention time with that of standard ginsenosides. The HPLC analysis revealed that out of 35 isolates, the mycelial extracts of four fungal endophytes (PSRF52, PSRF53, PSRF49 and PSRF58) exhibited peaks with a similar retention time of the standard ginsenoside, Compound K (CK). LC-ESI-MS/MS analysis led to the confirmation of ginsenoside CK production by the four fungal endophytes which showed a compound with m/z 639.6278, similar to that of standard ginsenoside CK with yield in potato dextrose broth flask fermentation ranging from 0.0019 to 0.0386 mg/g of mycelial mass in dry weight basis. The four prospective fungal endophyte isolates were identified as Thermothielavioides terrestris PSRF52, Aspergillus sp. PSRF49, Rutstroemiaceae sp. strain PSRF53, and Phaeosphaeriaceae sp. strain PSRF58 based on ITS sequencing. The present finding highlights the need for further study on growth optimization and other culture parameters to exploit the endophytes as an alternative source for ginsenoside CK production.


Subject(s)
Endophytes , Fermentation , Ginsenosides , Panax , Ginsenosides/metabolism , Endophytes/metabolism , Endophytes/isolation & purification , Panax/microbiology , Chromatography, High Pressure Liquid , Tandem Mass Spectrometry , Fungi/metabolism , Fungi/isolation & purification , Rhizome/microbiology
2.
Protoplasma ; 259(2): 327-342, 2022 Mar.
Article in English | MEDLINE | ID: mdl-34075471

ABSTRACT

Sowing depth significantly affects ginger (Zingiber officinale Roscoe) yields, and sowing depth can affect rhizosphere community structure through root exudates. However, the relationship between the reaction process in root zone and ginger rhizome development is unclear. In this study, we investigated the rhizome and root development and rhizosphere environment at different sowing depths (2 cm (SD2), 5 cm (SD5), and 10 cm (SD10)). It was found that SD10 significantly increased ginger yield, which is related to the development of vascular bundles and the expression of aquaporin. PLS-PM analysis found that root length, root absorption capacity, and soil enzymes have the strongest correlation with yield, while root diameter is negatively correlated with yield. Under SD10, the increase of auxin and ethylene content together with the expression of ARF7, LBD16, and PIN1 promoted the development of lateral roots. In addition, SD10 increased the secretion of root organic acids, amino acids, and carbohydrates, which in turn promoted the development of rhizosphere bacteria. The promotion of SD10 on nitrogen cycle and nitrogen fixation ability in turn promoted the development of ginger.


Subject(s)
Zingiber officinale , Zingiber officinale/chemistry , Plant Extracts , Rhizome/microbiology , Rhizosphere , Soil
3.
World J Microbiol Biotechnol ; 38(1): 15, 2021 Dec 08.
Article in English | MEDLINE | ID: mdl-34878606

ABSTRACT

Pairs polyphylla var. yunnanensis (Paris L.) is a valuable medicinal plant used in traditional Chinese medicine. The market demand for P. polyphylla has increased over time, but it has slow growth and a low natural propagation rate. Endophytic bacteria are bioactive microorganisms that form a mutualistic relationship with host plants in long-term coordinated evolution, and they can promote the growth and accumulation of effective components in host plants. The aims of this study were to identify endophytic bacteria of P. polyphylla and to characterize their properties in promoting plant growth. A total of 10 endophytic bacteria were isolated from rhizomes of P. polyphylla. The isolated endophytes exhibited a variable capacity for indole acetic acid production, phosphate solubilization and nitrogen fixation. To investigate the effects of the endophytes on plant growth, four endophyte strains, G5, J2, G20, and Y2, were selected to compare their ability to promote plant growth. The results indicated that microbial endophytes isolated from P. polyphylla rhizomes play a vital role in improving P. polyphylla plant growth and could be used as inoculants to establish a sustainable crop production system.


Subject(s)
Bacterial Physiological Phenomena , Endophytes/physiology , Melanthiaceae/growth & development , Melanthiaceae/microbiology , Plant Development , Rhizome/microbiology , DNA, Bacterial , Host Microbial Interactions , Indoleacetic Acids/metabolism , Plants, Medicinal/growth & development , Plants, Medicinal/microbiology , Symbiosis
4.
Pol J Microbiol ; 70(3): 359-372, 2021 Sep.
Article in English | MEDLINE | ID: mdl-34584530

ABSTRACT

Latent pathogenic fungi (LPFs) affect plant growth, but some of them may stably colonize plants. LPFs were isolated from healthy Houttuynia cordata rhizomes to reveal this mechanism and identified as Ilyonectria liriodendri, an unidentified fungal sp., and Penicillium citrinum. Sterile H. cordata seedlings were cultivated in sterile or non-sterile soils and inoculated with the LPFs, followed by the plants' analysis. The in vitro antifungal activity of H. cordata rhizome crude extracts on LPF were determined. The effect of inoculation of sterile seedlings by LPFs on the concentrations of rhizome phenolics was evaluated. The rates of in vitro growth inhibition amongst LPFs were determined. The LPFs had a strong negative effect on H. cordata in sterile soil; microbiota in non-sterile soil eliminated such influence. There was an interactive inhibition among LPFs; the secondary metabolites also regulated their colonization in H. cordata rhizomes. LPFs changed the accumulation of phenolics in H. cordata. The results provide that colonization of LPFs in rhizomes was regulated by the colonizing microbiota of H. cordata, the secondary metabolites in the H. cordata rhizomes, and the mutual inhibition and competition between the different latent pathogens.


Subject(s)
Fungi , Houttuynia , Microbial Interactions , Plant Extracts , Plants, Medicinal , Rhizome , Fungi/drug effects , Houttuynia/microbiology , Microbial Interactions/physiology , Plant Extracts/pharmacology , Plants, Medicinal/microbiology , Rhizome/chemistry , Rhizome/microbiology , Soil Microbiology
5.
Plant Signal Behav ; 16(9): 1929731, 2021 09 02.
Article in English | MEDLINE | ID: mdl-34092178

ABSTRACT

Endophytic fungi usually establish a symbiotic relationship with the host plant and affect its growth. In order to evaluate the impact of endophytic fungi on the Chinese herbal medicinal plant Houttuynia cordata Thunb., three endophytes isolated from the rhizomes of H. cordata, namely Ilyonectria liriodendra (IL), unidentified fungal sp. (UF), and Penicillium citrinum (PC), were co-cultured individually with H. cordata in sterile soil for 60 days. Analysis of the results showed that the endophytes stimulated the host plant in different ways: IL increased the growth of rhizomes and the accumulation of most of the phenolics and volatiles, UF promoted the accumulation of the medicinal compounds afzelin, decanal, 2-undecanone, and borneol without influencing host plant growth, and PC increased the fresh weight, total leaf area and height of the plants, as well as the growth of the rhizomes, but had only a small effect on the concentration of major secondary metabolites. Our results proved that the endophytic fungi had potential practical value in terms of the production of Chinese herbal medicines, having the ability to improve the yield and accumulation of medicinal metabolites.


Subject(s)
Endophytes/metabolism , Houttuynia/chemistry , Houttuynia/growth & development , Houttuynia/microbiology , Rhizome/growth & development , Rhizome/metabolism , Rhizome/microbiology , Hypocreales/metabolism , Penicillium/metabolism , Plant Extracts/chemistry , Plant Extracts/metabolism , Plants, Medicinal/chemistry , Plants, Medicinal/growth & development , Plants, Medicinal/microbiology , Symbiosis
6.
BMC Microbiol ; 20(1): 291, 2020 09 21.
Article in English | MEDLINE | ID: mdl-32957914

ABSTRACT

BACKGROUND: The dried roots and rhizomes of medicinal licorices are widely used worldwide as a traditional medicinal herb, which are mainly attributed to a variety of bioactive compounds that can be extracted from licorice root. Endophytes and plants form a symbiotic relationship, which is an important source of host secondary metabolites. RESULTS: In this study, we used high-throughput sequencing technology and high-performance liquid chromatography to explore the composition and structure of the endophytic bacterial community and the content of bioactive compounds (glycyrrhizic acid, liquiritin and total flavonoids) in different species of medicinal licorices (Glycyrrhiza uralensis, Glycyrrhiza glabra, and Glycyrrhiza inflata) and in different planting years (1-3 years). Our results showed that the contents of the bioactive compounds in the roots of medicinal licorices were not affected by the species, but were significantly affected by the main effect growing year (1-3) (P < 0.05), and with a trend of stable increase in the contents observed with each growing year. In 27 samples, a total of 1,979,531 effective sequences were obtained after quality control, and 2432 effective operational taxonomic units (OTUs) were obtained at 97% identity. The phylum Proteobacteria, Actinobacteria, Bacteroidetes and Firmicutes, and the genera unified-Rhizobiaceae, Pseudomonas, Novosphingobium, and Pantoea were significantly dominant in the 27 samples. Distance-based redundancy analysis (db-RDA) showed that the content of total flavonoids explained the differences in composition and distribution of endophytic bacterial communities in roots of cultivated medicinal liquorices to the greatest extent. Total soil salt was the most important factor that significantly affected the endophytic bacterial community in soil factors, followed by ammonium nitrogen and nitrate nitrogen. Among the leaf nutrition factors, leaf water content had the most significant effect on the endophytic bacterial community, followed by total phosphorus and total potassium. CONCLUSIONS: This study not only provides information on the composition and distribution of endophytic bacteria in the roots of medicinal licorices, but also reveals the influence of abiotic factors on the community of endophytic bacteria and bioactive compounds, which provides a reference for improving the quality of licorice.


Subject(s)
Flavonoids/biosynthesis , Glycyrrhiza uralensis/microbiology , Glycyrrhiza/microbiology , Plant Roots/microbiology , Rhizome/microbiology , Actinobacteria/classification , Actinobacteria/genetics , Actinobacteria/isolation & purification , Ammonia/pharmacology , Bacteroidetes/classification , Bacteroidetes/genetics , Bacteroidetes/isolation & purification , DNA Barcoding, Taxonomic , DNA, Bacterial/genetics , Endophytes/physiology , Firmicutes/classification , Firmicutes/genetics , Firmicutes/isolation & purification , Flavanones/biosynthesis , Flavanones/isolation & purification , Flavonoids/classification , Flavonoids/isolation & purification , Glucosides/biosynthesis , Glucosides/isolation & purification , Glycyrrhiza/drug effects , Glycyrrhiza/metabolism , Glycyrrhiza uralensis/drug effects , Glycyrrhiza uralensis/metabolism , Glycyrrhizic Acid/isolation & purification , Glycyrrhizic Acid/metabolism , Microbial Consortia/drug effects , Microbial Consortia/genetics , Nitrates/pharmacology , Phylogeny , Plant Roots/metabolism , Proteobacteria/classification , Proteobacteria/genetics , Proteobacteria/isolation & purification , Rhizobiaceae/classification , Rhizobiaceae/genetics , Rhizobiaceae/isolation & purification , Rhizome/metabolism , Seasons , Secondary Metabolism , Soil/chemistry , Soil Microbiology , Symbiosis
7.
Fitoterapia ; 146: 104711, 2020 Oct.
Article in English | MEDLINE | ID: mdl-32860875

ABSTRACT

Penctrimertone (1), a novel citrinin dimer bearing a 6/6/6/6 tetracyclic ring scaffold, along with two known compounds xerucitrinic acid A (2) and citrinin (3) were isolated from the endophytic fungus Penicillium sp. T2-11. Their structures were unequivocally established by a comprehensive interpretation of the spectroscopic data, with the stereochemistry for 1 was defined by a combination of TDDFT-ECD calculations and the DP4+ probability analysis based on NMR chemical shift calculations. Bioassays revealed that compound 1 exhibited noticeable antimicrobial activities and moderate cytotoxicity. A plausible biosynthetic pathway of 1 was also proposed.


Subject(s)
Anti-Bacterial Agents/pharmacology , Antineoplastic Agents/pharmacology , Citrinin/pharmacology , Gastrodia/microbiology , Penicillium/chemistry , Anti-Bacterial Agents/isolation & purification , Antineoplastic Agents/isolation & purification , Biological Products/isolation & purification , Biological Products/pharmacology , Cell Line, Tumor , Chin , Citrinin/isolation & purification , Endophytes/chemistry , Humans , Molecular Structure , Rhizome/microbiology
8.
World J Microbiol Biotechnol ; 36(5): 77, 2020 May 13.
Article in English | MEDLINE | ID: mdl-32399738

ABSTRACT

Protease mediated proteolysis has been widely implicated in virulence of necrotrophic fungal pathogens. This is counteracted in plants by evolving new and effective antimicrobial peptides (AMP) that constitute important components of innate immune system. Peptide extraction from rhizome of Zingiber zerumbet was optimized using ammonium sulphate (50-80% w/v) and acetone (60 and 100% v/v) with maximal protein recovery of 1.2 ± 0.4 mg/g obtained using 100% acetone. Evaluation of inhibitory potential of Z. zerumbet rhizome protein extract to prominent hydrolases of necrotrophic Pythium myriotylum revealed maximal inhibition of proteases (75.8%) compared to other hydrolytic enzymes. Protein was purified by Sephacryl S200HR resin resulting in twofold purification and protease inhibition of 84.4%. Non-reducing polyacrylamide gel electrophoresis (PAGE) of the fractions yielded two bands of 75 kDa and 25 kDa molecular size. Peptide mass fingerprint of the protein bands using matrix assisted laser desorption/ionization (MALDI)-time of flight (TOF) mass spectroscopy (MS) and subsequent MASCOT searches revealed peptide match to methylesterase from Arabidopsis thaliana (15%) and to hypothetical protein from Oryza sativa (98%) respectively. Further centrifugal filter purification using Amicon Ultra (10,000 MW cut-off) filter, yielded a prominent band of 25 kDa size. Concentration dependent inhibition of zoospore viability by Z. zerumbet AMP designated as ZzAMP was observed with maximal inhibition of 89.5% at 4 µg protein and an IC50 value of 0.59 µg. Studies are of particular relevance in the context of identifying the molecules involved in imparting below ground defense in Z. zerumbet as well in development of AMPs as potential candidate molecules for control of necrotrophic pathogens of agricultural relevance.


Subject(s)
Anti-Bacterial Agents/pharmacology , Antimicrobial Cationic Peptides/pharmacology , Peptide Hydrolases/drug effects , Plant Extracts/pharmacology , Pythium/drug effects , Rhizome/microbiology , Zingiberaceae/microbiology , Anti-Bacterial Agents/chemistry , Antimicrobial Cationic Peptides/chemistry , Arabidopsis , Enzyme Inhibitors , Fungi/drug effects , Oryza , Peptides/pharmacology , Plant Extracts/chemistry , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Zingiberaceae/growth & development
9.
Arch Microbiol ; 202(7): 1899-1906, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32448960

ABSTRACT

Endophytic bacteria have been reported to have symbiotic, mutualistic, commensalistic or trophobiotic relationships with various plant parts. As part of its adaptation, many endophytic organisms are known to exhibit properties with multiple beneficial effects to the plant system. Even though many bacterial genera have been identified to have endophytic association, isolation of those which were previously demonstrated well for human association is quite interesting. In the study, endophytic bacteria Ceb1 isolated from the rhizome of Curcuma longa was identified by 16S rDNA sequencing as Staphylococcus sp. Further, Ceb1 was observed to have the ability to tolerate drought stress. While screening for the plant growth-promoting traits, Ceb1 was found to be positive for IAA production both under drought-stressed and normal conditions as confirmed by HPLC. The Ceb1 priming with Vigna unguiculata was observed to enhance the growth parameters of the plant. Analysis of Ceb1-treated plants by ICP-MS further showed modulation of both macro- and micronutrients. Upon drought stress induction in Vigna unguiculata, Ceb1 was found to provide synergistic plant growth-promoting effect to the plant along with the supplemented silicate sources. Under the changing agroclimatic conditions, exploring the plant stress-alleviating effects of endophytes is highly significant.


Subject(s)
Droughts , Plant Development , Plants/microbiology , Silicates/pharmacology , Staphylococcus/physiology , Curcuma/microbiology , Endophytes/classification , Endophytes/genetics , Endophytes/isolation & purification , Endophytes/metabolism , Plant Development/physiology , RNA, Ribosomal, 16S/genetics , Rhizome/microbiology , Staphylococcus/genetics , Staphylococcus/isolation & purification , Symbiosis , Vigna/physiology
10.
Fitoterapia ; 140: 104422, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31756377

ABSTRACT

Peniterester (1), a new tricyclic sesquiterpene, together with 6 known compounds (2-7) were isolated from the secondary metabolites of an artificial mutant Penicillium sp. T2-M20 which was obtained from the parental strain Penicillium sp. T2-8 via UV irradiation as well as nitrosoguanidine (NTG) induction. Peniterester was only produced by the mutant T2-M20 on the basis of LC-MS analysis. Meanwhile, the results of in vitro bioactivities screening indicated that peniterester owned obvious antibacterial activities against Bacillus subtilis, Escherichia coli and Staphylococcus aureus with MICs of 8.0, 8.0 and 4.0 µg/mL, respectively.


Subject(s)
Anti-Bacterial Agents/pharmacology , Penicillium/chemistry , Sesquiterpenes/pharmacology , Anti-Bacterial Agents/isolation & purification , Bacillus subtilis/drug effects , Cell Line, Tumor , China , Escherichia coli/drug effects , Gastrodia/microbiology , Humans , Microbial Sensitivity Tests , Molecular Structure , Rhizome/microbiology , Secondary Metabolism , Sesquiterpenes/isolation & purification , Staphylococcus aureus/drug effects
11.
J Med Food ; 22(10): 1067-1077, 2019 Oct.
Article in English | MEDLINE | ID: mdl-31403348

ABSTRACT

To reduce microbial loads in medicinal herbs, Cnidii Rhizoma and Alismatis Rhizoma were subjected to electron-beam (e-beam) irradiation at doses (≤10 kGy) as permitted by the Korean Food Code. The effects of e-beam irradiation on the microbial load, stability of the active components, and anti-inflammatory activity of medicinal herbs were determined. We observed that the total aerobic bacteria (TAB; 4.0-7.0 log CFU/g), yeasts and molds (Y&M; 3.3-6.8 log CFU/g), and coliform counts (CC; 3.2-3.8 log CFU/g) in both herb samples were effectively reduced in a dose-dependent manner, resulting in acceptable levels of <3.0 log CFU/g in TAB and Y&M and negative in CC at 10 kGy irradiation. The concentration of the active components (0.87-4.22 mg/g) of Cnidii Rhizoma, including z-ligustilide, chlorogenic acid, senkyunolide A, and ferulic acid, in order of prevalence and those (0.86-2.76 mg/g) of Alismatis Rhizoma, including Alisol B acetate and Alisol B, were not changed at irradiation doses of ≤10 kGy. The extracts of e-beam irradiated Cnidii Rhizoma and Alismatis Rhizoma showed a reduced production of inflammation-related factors, such as nitric oxide, prostaglandin E2, interleukin (IL)-1ß, and IL-6, in a concentration-dependent manner, which was induced by lipopolysaccharide in RAW 264.7 cell. However, there was no significant difference observed at e-beam irradiation doses of 0, 1, 5, and 10 kGy. Thus, we confirm that e-beam irradiation up to 10 kGy was effective for the control of microbial load in Cnidii Rhizoma and Alismatis Rhizoma without causing considerable changes in their major active components and anti-inflammatory activity. The results show the potential of e-beam application for sanitization of medicinal herbs.


Subject(s)
Alisma/chemistry , Anti-Inflammatory Agents/chemistry , Apiaceae/chemistry , Bacterial Load , Rhizome/chemistry , Alisma/microbiology , Alisma/radiation effects , Animals , Anti-Inflammatory Agents/pharmacology , Apiaceae/microbiology , Apiaceae/radiation effects , Dinoprostone/metabolism , Electrons , Interleukins/metabolism , Mice , Nitric Oxide/metabolism , Phytochemicals/chemistry , Phytochemicals/pharmacology , Plants, Medicinal/chemistry , Plants, Medicinal/microbiology , Plants, Medicinal/radiation effects , RAW 264.7 Cells , Rhizome/microbiology , Rhizome/radiation effects
12.
PLoS One ; 13(4): e0195570, 2018.
Article in English | MEDLINE | ID: mdl-29684035

ABSTRACT

A survey of the ecological variability within 52 populations of Schoenoplectus californicus (C.A. Mey.) Soják across its distributional range revealed that it is commonly found in nitrogen (N) limited areas, but rarely in phosphorus limited soils. We explored the hypothesis that S. californicus supplements its nitrogen demand by bacterial N2-fixation processes associated with its roots and rhizomes. We estimated N2-fixation of diazotrophs associated with plant rhizomes and roots from several locations throughout the species' range and conducted an experiment growing plants in zero, low, and high N additions. Nitrogenase activity in rhizomes and roots was measured using the acetylene reduction assay. The presence of diazotrophs was verified by the detection of the nifH gene. Nitrogenase activity was restricted to rhizomes and roots and it was two orders of magnitude higher in the latter plant organs (81 and 2032 nmol C2H4 g DW-1 d-1, respectively). Correspondingly, 40x more nifH gene copies were found on roots compared to rhizomes. The proportion of the nifH gene copies in total bacterial DNA was positively correlated with the nitrogenase activity. In the experiment, the contribution of fixed N to the plant N content ranged from 13.8% to 32.5% among clones from different locations. These are relatively high values for a non-cultivated plant and justify future research on the link between N-fixing bacteria and S. californicus production.


Subject(s)
Cyperaceae/metabolism , Nitrogen Fixation , Nitrogen/metabolism , Plant Roots/metabolism , Rhizome/metabolism , Wetlands , Bacterial Proteins/metabolism , Cyperaceae/microbiology , Nitrogen/chemistry , Nitrogenase/metabolism , North America , Oxidoreductases/metabolism , Phosphorus/chemistry , Phosphorus/metabolism , Plant Dispersal , Plant Proteins/metabolism , Rhizome/microbiology , Soil/chemistry , South America , Species Specificity
13.
Crit Rev Food Sci Nutr ; 57(1): 18-34, 2017 Jan 02.
Article in English | MEDLINE | ID: mdl-26528824

ABSTRACT

Spices and herbs have been used since ancient times as flavor and aroma enhancers, colorants, preservatives, and traditional medicines. There are more than 30 spices and herbs of global economic and culinary importance. Among the spices, black pepper, capsicums, cumin, cinnamon, nutmeg, ginger, turmeric, saffron, coriander, cloves, dill, mint, thyme, sesame seed, mustard seed, and curry powder are the most popular spices worldwide. In addition to their culinary uses, a number of functional properties of aromatic herbs and spices are also well described in the scientific literature. However, spices and herbs cultivated mainly in tropic and subtropic areas can be exposed to contamination with toxigenic fungi and subsequently mycotoxins. This review provides an overview on the mycotoxin risk in widely consumed spices and aromatic herbs.


Subject(s)
Food Contamination , Global Health , Mycotoxins/toxicity , Spices/analysis , Animal Feed/analysis , Animal Feed/microbiology , Animal Feed/toxicity , Animal Welfare , Animals , Food Contamination/prevention & control , Humans , Legislation, Food , Mycotoxins/analysis , Plant Components, Aerial/chemistry , Plant Components, Aerial/growth & development , Plant Components, Aerial/microbiology , Plant Components, Aerial/toxicity , Plants, Edible/chemistry , Plants, Edible/growth & development , Plants, Edible/microbiology , Plants, Edible/toxicity , Plants, Medicinal/chemistry , Plants, Medicinal/growth & development , Plants, Medicinal/microbiology , Plants, Medicinal/toxicity , Rhizome/chemistry , Rhizome/growth & development , Rhizome/microbiology , Rhizome/toxicity , Seeds/chemistry , Seeds/growth & development , Seeds/microbiology , Seeds/toxicity , Spices/adverse effects , Spices/standards
14.
Zhongguo Zhong Yao Za Zhi ; 41(16): 3027-3031, 2016 Aug.
Article in Chinese | MEDLINE | ID: mdl-28920343

ABSTRACT

To investigate the microbial species, amount changes as well as the isolation and identification of domain strains at different fermentation time points of Pinelliae Rhizoma Fermentata, and provide basis for exploring the mechanism of Pinelliae Rhizoma Fermentata processing. Five samples were chosen at the time points (0, 18, 36, 54, 72 h) of Pinelliae Rhizoma Fermentata processing. Bacteria, mold and yeast from the samples were cultured; their colonies were counted, and the dominant strains were isolated and purified. The dominant bacteria and dominant fungi were identified by 16S rDNA and 26S rDNA sequencing respectively. The results showed that the bacteria count was low with slow and smooth changes in the fermentation process;while mold and yeast grew dramatically after 54 h culturing and reached 1×107 CFU•mL⁻¹ at the end of fermentation. Through the NCBI homology alignment and phylogenetic tree construction, the dominant bacteria were identified as Streptomyces sp., Bacillus pumilus, B. subtilis, B. aryabhattai and other Bacillus sp.; the dominant yeast was identified as Meyerozyma guilliermondii; the dominant mold were identified as Paecilomyces variotii, Byssochlamys spectabilis, and Aspergillus niger in the processing of Pinelliae Rhizoma Fermentata. The results indicated that multiple microbe species, especially yeast and mold, played a role in the fermentation processing of Pinelliae Rhizoma Fermentata. M. guilliermondii, P. variotii, P. variotii and A. niger and Bacillus sp. can be the crucial factors in the processing of Pinelliae Rhizoma Fermentata.


Subject(s)
Bacteria/classification , Drugs, Chinese Herbal/analysis , Fermentation , Fungi/classification , Pinellia/microbiology , Phylogeny , Rhizome/microbiology
15.
Zhongguo Zhong Yao Za Zhi ; 40(6): 1055-60, 2015 Mar.
Article in Chinese | MEDLINE | ID: mdl-26226744

ABSTRACT

In this paper, the varying pattern of the amount of rhizospheric microorganisms, including bacteria, actinomycetes and fungus, was observed during the cultivation of Paris polyphylla var. yunnanensis. And the correlations between number of rhizospheric microorganisms and the quality of P. polyphylla var. yunnanensis were also studied. The results showed that the rhizospheric microorganism source of P. polyphylla var. yunnanensis was rich. The distribution of rhizospheric microorganisms (soil bacteria, fungus, actinomycetes, potassium-solubilizing bacteria, inorganic phosphorus-solubilizing bacteria, organic phosphorus-solubilizing bacteria) collected from different origin places existed significant difference (P < 0.05). The varying pattern for the amount of rhizospheric microorganisms was showed as following: the amount of bacteria > the amount of actinomycetes > the amount of fungus. The medicinal quality of P. polyphylla var. yunnanensis was influenced by their habits, and the increase of cultivation years caused the obvious decrease of the quality of P. polyphylla var. yunnanensis. Therefore, the increase of cultivation years will cause the variation of the soil micro-ecology flora, and decrease the nutrient absorption and the utilization of P. polyphylla var. yunnanensis, which will make the decrease of the medical quality of P. polyphylla var. yunnanensis.


Subject(s)
Bacteria/isolation & purification , Fungi/isolation & purification , Liliaceae/chemistry , Plant Extracts/analysis , Rhizosphere , Saponins/analysis , Soil Microbiology , Bacteria/genetics , Bacteria/growth & development , Biodiversity , China , Fungi/genetics , Fungi/growth & development , Liliaceae/microbiology , Rhizome/chemistry , Rhizome/microbiology
16.
Zhongguo Zhong Yao Za Zhi ; 40(20): 3945-52, 2015 Oct.
Article in Chinese | MEDLINE | ID: mdl-27062807

ABSTRACT

Through potted inoculation test at room temperature and indoor analysis, the photosynthetic parameters and physiological and biochemical indexes of Paris polyphylla var. yunnanensis were observed after 28 arbuscular mycorrhizal (AM) fungi were injected into the P. polyphylla var. yunnanensis growing in a sterile soil environment. The results showed that AM fungi established a good symbiosis with P. polyphylla var. yunnanensis. The AM fungi influenced the photosynthetic parameters and physiological and biochemical indexes of P. polyphylla var. yunnanensis. And the influences were varied depending on different AM fungi. The application of AM fungi improved photosynthesis intensity of P. polyphylla var. yunnanensis mesophyll cells, the contents of soluble protein and soluble sugar, protective enzyme activity of P. polyphylla var. yunnanensis leaf, which was beneficial to resist the adverse environment and promote the growth of P. polyphylla var. yunnanensis. Otherwise, there was a certain mutual selectivity between P. polyphylla var. yunnanensis and AM fungi. From the comprehensive effect of inoculation, Racocetra coralloidea, Scutellospora calospora, Claroideoglomus claroideum, S. pellucida and Rhizophagus clarus were the most suitable AM fungi to P. polyphylla var. yunnanensis when P. polyphylla var. yunnanensis was planted in the field.


Subject(s)
Fungi/physiology , Liliaceae/metabolism , Liliaceae/microbiology , Mycorrhizae/physiology , Photosynthesis , Fungi/classification , Fungi/isolation & purification , Mycorrhizae/classification , Mycorrhizae/isolation & purification , Plant Leaves/metabolism , Rhizome/microbiology
17.
Genet Mol Res ; 14(4): 17612-21, 2015 Dec 21.
Article in English | MEDLINE | ID: mdl-26782406

ABSTRACT

Endophyte microorganisms live inside plants without causing them any apparent damage. Recently, endophytic microorganisms have attracted attention because they can produce bioactive compounds of biotechnological interest. The endophytic microorganisms in Paris polyphylla var. yunnanensis (Liliaceae) - a species used since antiquity in traditional Chinese medicine - are under scrutiny because they may be responsible for producing the bioactive metabolites associated with the plant. The levels of bioactive metabolites in the rhizomes of P. polyphylla increase with rhizome age. To elucidate the roles played by endophytes in the accumulation of bioactive metabolites, we investigated the community structure and diversity of the endophytic microorganisms in P. polyphylla rhizomes of different ages (4, 6, and 8 years) using 16S rRNA and internal transcribed spacer (ITS) sequence analysis. 16S rDNA amplicon pyrosequencing revealed that the number of operational taxonomic units was lower in the 8-year-old samples than in the other samples. A total of 28 phyla were observed in the P. polyphylla samples and the predominant bacteria were of the Cyanobacteria and Proteobacteria phyla. Moreover, the percentage of Cyanobacteria increased with rhizome age. Similarly, ITS1 amplicon pyrosequencing identified developmental changes in the most abundant fungal classes; some classes were more prevalent in the 8-year-old rhizomes than in younger rhizomes, indicating the importance in secondary metabolism in older rhizomes. Our study showed that endophyte microorganism diversity and prevalence depend on P. polyphylla rhizome age. There was also an indication that some endophyte microorganisms contribute to the higher saponin content in older P. polyphylla specimens.


Subject(s)
Cyanobacteria/genetics , Liliaceae/genetics , Proteobacteria/genetics , RNA, Ribosomal, 16S/genetics , Rhizome/microbiology , Bacteria/genetics , Cyanobacteria/isolation & purification , Endophytes/genetics , Liliaceae/microbiology , Medicine, Chinese Traditional , Proteobacteria/isolation & purification , Rhizome/genetics
18.
PLoS One ; 9(12): e115289, 2014.
Article in English | MEDLINE | ID: mdl-25536070

ABSTRACT

In the present study, the terminal-restriction fragment length polymorphism (T-RFLP) technique, combined with the use of a clone library, was applied to assess the baseline diversity of fungal endophyte communities associated with rhizomes of Alpinia officinarum Hance, a medicinal plant with a long history of use. A total of 46 distinct T-RFLP fragment peaks were detected using HhaI or MspI mono-digestion-targeted, amplified fungal rDNA ITS sequences from A. officinarum rhizomes. Cloning and sequencing of representative sequences resulted in the detection of members of 10 fungal genera: Pestalotiopsis, Sebacina, Penicillium, Marasmius, Fusarium, Exserohilum, Mycoleptodiscus, Colletotrichum, Meyerozyma, and Scopulariopsis. The T-RFLP profiles revealed an influence of growth year of the host plant on fungal endophyte communities in rhizomes of this plant species; whereas, the geographic location where A. officinarum was grown contributed to only limited variation in the fungal endophyte communities of the host tissue. Furthermore, non-metric multidimensional scaling (NMDS) analysis across all of the rhizome samples showed that the fungal endophyte community assemblages in the rhizome samples could be grouped according to the presence of two types of active indicator chemicals: total volatile oils and galangin. Our present results, for the first time, address a diverse fungal endophyte community is able to internally colonize the rhizome tissue of A. officinarum. The diversity of the fungal endophytes found in the A. officinarum rhizome appeared to be closely correlated with the accumulation of active chemicals in the host plant tissue. The present study also provides the first systematic overview of the fungal endophyte communities in plant rhizome tissue using a culture-independent method.


Subject(s)
Alpinia/microbiology , Biodiversity , Endophytes/chemistry , Endophytes/growth & development , Fungi/chemistry , Fungi/growth & development , Rhizome/microbiology , DNA Fingerprinting , DNA, Ribosomal/genetics , Endophytes/classification , Fungi/classification , Polymorphism, Restriction Fragment Length
19.
Microb Cell Fact ; 13: 144, 2014 Oct 24.
Article in English | MEDLINE | ID: mdl-25338952

ABSTRACT

BACKGROUND: Plant growth promoting rhizobacteria (PGPR) are functionally diverse group of bacteria having immense potential as biofertilizers and biopesticides. Depending upon their function, they may serve as partial replacements for chemical fertilizer or pesticides as an eco-friendly and cost-effective alternatives as compared to their synthetic counterparts. Therefore, isolation, characterization and practical evaluation of PGPRs having the aforementioned multifaceted beneficial characteristics, are essentially required. This study describes the detailed polyphasic characterization of Bacillus sp. strain RMB7 having profound broad spectrum antifungal activity and plant growth promoting potential. RESULTS: Based on 16S rRNA gene sequencing, strain RMB7 was identified as Bacillus specie. This strain exhibited the production of 8 mg. L(-1)of indole-3-acetic acid (IAA) in tryptophan-supplemented medium. It was able to solubilize 50.6 mg. L(-1) tri-calcium phosphate, reduced 601ηmol acetylene h(-1)/vial and inhibited >70% growth of nine fungal phytopathogens tested in vitro. Under natural pathogen pressure, inoculation with strain RMB7 and RMB7-supernatant conferred resistance by arugula plant against Pythium irregulare with a concurrent growth improvement over non-inoculated plants. The T-RFLP analysis based on 16S rRNA gene showed that inoculation with RMB7 or its supernatant have a major impact on the indigenous rhizosphere bacterial population. Mass spectrometric analysis revealed the production of lipopeptide surfactins as well as iturin A presence in crude extract of RMB7. PCR-amplification further confirmed the presence of genes involved in the biosynthesis of these two bioactive lipopeptide compounds. CONCLUSIONS: The data show that Bacillus sp. strain RMB7 has multifaceted beneficial characteristics. It may be an ideal plant growth promoting as well as biocontrol agent, for its integrated use in disease and nutrient management strategies.


Subject(s)
Bacillus , Pythium , Rhizome , Acetylene/metabolism , Antifungal Agents/metabolism , Bacillus/genetics , Bacillus/isolation & purification , Bacillus/metabolism , Indoleacetic Acids/metabolism , Pythium/growth & development , Pythium/microbiology , RNA, Ribosomal, 16S/genetics , Rhizome/growth & development , Rhizome/microbiology
20.
Yao Xue Xue Bao ; 47(9): 1237-42, 2012 Sep.
Article in Chinese | MEDLINE | ID: mdl-23227557

ABSTRACT

To compare the effects of inoculated or non-inoculated with arbuscular mycorrhizal (AM) fungi on the steroidal saponin component in root of Paris polyphylla var. yunnanensis. By pot experiments, steroid saponin component in root of P. polyphylla var. yunnanensis was determined and compared by HPLC. The results showed there was difference in the effects of different AM fungal on the secondary metabolite steroid saponin in P. polyphylla var. yunnanensis. After elicitors treatment, AM fungal did not change the chemical backgrounds of P. polyphylla var. yunnanensis, but can improve partly the content of chemical compositions in roots. In conclusion, there was selectivity between AM fungal and P. polyphylla var. yunnanensis. Glomus intraradices was the most appropriate strain for inoculation P. polyphylla var. yunnanensis.


Subject(s)
Liliaceae/chemistry , Liliaceae/microbiology , Mycorrhizae/growth & development , Saponins/metabolism , Plants, Medicinal/chemistry , Plants, Medicinal/microbiology , Rhizome/chemistry , Rhizome/microbiology
SELECTION OF CITATIONS
SEARCH DETAIL