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1.
Nanoscale ; 15(12): 5798-5808, 2023 Mar 23.
Article in English | MEDLINE | ID: mdl-36857681

ABSTRACT

Plant-derived extracellular nanovesicles contain RNA and proteins with unique and diverse pharmacological mechanisms. The extracellular nanovesicles encapsulating plant extracts resemble exosomes as they have a round, lipid bilayer morphology. Ginseng is anti-inflammatory, anti-cancer, immunostimulant, and osteogenic/anti-osteoporotic. Here, we confirmed that ginseng-derived extracellular nanovesicles (GDNs) inhibit osteoclast differentiation and elucidated the associated molecular mechanisms. We isolated GDNs by centrifugation with a sucrose gradient. We measured their dynamic light scattering and zeta potentials and examined their morphology by transmission electron microscopy. We used bone marrow-derived macrophages (BMMs) to determine the potential cytotoxicity of GDNs and establish their ability to inhibit osteoclast differentiation. The GDNs treatment maintained high BMM viability and proliferation whilst impeding osteoclastogenesis. Tartrate-resistant acid phosphatase and F-actin staining revealed that GDNs at concentrations >1 µg mL-1 strongly hindered osteoclast differentiation. Moreover, they substantially suppressed the RANKL-induced IκBα, c-JUN n-terminal kinase, and extracellular signal-regulated kinase signaling pathways and the genes regulating osteoclast maturation. The GDNs contained elevated proportions of Rb1 and Rg1 ginsenosides and were more effective than either of them alone or in combination at inhibiting osteoclast differentiation. In vivo bone analysis via microcomputerized tomography, bone volume/total volume ratios, and bone mineral density and bone cavity measurements demonstrated the inhibitory effect of GDNs against osteoclast differentiation in lipopolysaccharide-induced bone resorption mouse models. The results of this work suggest that GDNs are anti-osteoporotic by inhibiting osteoclast differentiation and are, therefore, promising for use in the clinical prevention and treatment of bone loss diseases.


Subject(s)
Bone Resorption , Exosomes , Panax , Animals , Mice , Osteoclasts , Exosomes/metabolism , Bone Resorption/drug therapy , Bone Resorption/metabolism , Ultracentrifugation , Cell Differentiation
2.
Eur Biophys J ; 49(8): 719-727, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32870347

ABSTRACT

Analytical ultracentrifugation (AUC) cells use either quartz or sapphire windows as end caps for the cell housing. Current generation sapphire windows are not recommended for absorbance data collection below 235 nm, because the window material shows a precipitous drop in transmittance at low wavelengths due to impurities in the sapphire. Quartz windows can be used below 235 nm as they do not exhibit adverse transmittance at low wavelengths. In this study, we demonstrate the optical properties of new generation sapphire windows and compare them to those of quartz windows across a wide range of wavelengths and present the results of sedimentation velocity experiments on BSA using both types of windows using data collected at both the 280 nm absorbance maxima as well as the 230-240 nm (closer to the peptide bond maximum). Our results show that the quartz and new generation sapphire windows deliver identical results in absorbance mode. We also demonstrate that quartz windows suffer significant mechanical deformation while spinning at very high speeds, while sapphire windows do not. This renders Rayleigh interference mode data collected at high speeds using quartz windows much noisier than with sapphire windows-which we have quantified by measuring how the signal to noise ratio of Fourier transformed Rayleigh interference scans degrades at high speed. Thus, we conclude that new-generation sapphire windows can be used for all AUC experiments through almost the entire mid UV range-obviating the need for quartz windows, unless wavelengths below 220 nm must be accessed.


Subject(s)
Aluminum Oxide , Quartz , Ultracentrifugation/methods , Animals , Quality Control , Serum Albumin, Bovine/isolation & purification
3.
Int J Biol Macromol ; 156: 18-26, 2020 Aug 01.
Article in English | MEDLINE | ID: mdl-32275991

ABSTRACT

The selenocysteine (Sec) incorporation is a co-translational event taking place at an in-frame UGA-codon and dependent on an organized molecular machinery. Selenium delivery requires mainly two enzymes, the selenocysteine lyase (CsdB) is essential for Sec recycling and conversion to selenide, further used by the selenophosphate synthetase (SelD), responsible for the conversion of selenide in selenophosphate. Therefore, understanding the catalytic mechanism involved in selenium compounds delivery, such as the interaction between SelD and CsdB (EcCsdB.EcSelD), is fundamental for the further comprehension of the selenocysteine synthesis pathway and its control. In Escherichia coli, EcCsdB.EcSelD interaction must occur to prevent cell death from the release of the toxic intermediate selenide. Here, we demonstrate and characterize the in vitro EcSelD.EcCsdB interaction by biophysical methods. The EcSelD.EcCsdB interaction occurs with a stoichiometry of 1:1 in presence of selenocysteine and at a low-nanomolar affinity (~1.8 nM). The data is in agreement with the small angle X-ray scattering model fitted using available structures. Moreover, yeast-2-hybrid assays supported the macromolecular interaction in the cellular environment. This is the first report that demonstrates the interaction between EcCsdB and EcSelD supporting the hypothesis that EcSelD.EcCsdB interaction is necessary to sequester the selenide during the selenocysteine incorporation pathway in Bacteria.


Subject(s)
Lyases/chemistry , Lyases/metabolism , Phosphotransferases/chemistry , Phosphotransferases/metabolism , Selenocysteine/biosynthesis , Calorimetry, Differential Scanning , Escherichia coli/genetics , Escherichia coli/metabolism , Models, Molecular , Protein Stability , Protein Unfolding , Scattering, Small Angle , Selenium/metabolism , Spectrometry, Fluorescence , Thermodynamics , Two-Hybrid System Techniques , Ultracentrifugation
4.
Food Chem ; 313: 125926, 2020 May 30.
Article in English | MEDLINE | ID: mdl-31945703

ABSTRACT

This study investigates whether the formation of monochloropropane diol fatty acid esters (MCPDE) can be mitigated by removing the residual sediments from vegetable oils. Settling and centrifugation were conducted in crude sunflower and palm oil and the purified oils and their sediment-rich fractions were heated and analyzed for their MCPDE content. Increased MCPDE levels by factors of x2 to x6 were found in the sediment-rich fractions of settled sunflower oils compared to the sediment-free oil. The sediment-containing fraction could be however purified by ultracentrifugation resulting in the mitigation of MCPDE levels by a factor of 10. The effect of residual sediment on the MCPDE formation was also confirmed in the case of palm oil showing x2 to x10 more MCPDE formation in the sediment containing fractions compared to the purified oil. These results confirm that the mechanical removal of the trace sediments from crude vegetable oils results in reduced MCPDE levels.


Subject(s)
Esters/analysis , Plant Oils/chemistry , Propylene Glycols/chemistry , Chromatography, High Pressure Liquid , Esters/chemistry , Mass Spectrometry , Palm Oil/chemistry , Sunflower Oil/chemistry , Temperature , Ultracentrifugation
5.
Int J Pharm ; 577: 118998, 2020 Mar 15.
Article in English | MEDLINE | ID: mdl-31935473

ABSTRACT

Propofol is intravenously administered oil-in-water emulsion stabilized by egg lecithin phospholipids indicated for the induction and maintenance of general anesthesia or sedation. It is generally assumed to be structurally homogenous as characterized by commonly used dynamic light scattering technique and laser diffraction. However, the excessive amount of egg lecithin phospholipids added to the propofol formulation may, presumably, give rise to additional formation of lipid vesicles (i.e., vesicular structures consisting of a phospholipid bilayer). In this study, we investigate the use of high-resolution cryogenic transmission electron microscopy (cryo-TEM) in morphological characterization of four commercially available propofol drug products. The TEM result, for the first time, reveals that all propofol drug products contain lipid vesicles and oil droplet-lipid vesicle aggregated structures, in addition to oil droplets. Statistical analysis shows the size and ratio of the lipid vesicles varies across four different products. To evaluate the impact of such morphological differences on active pharmaceutical ingredient (API)'s distribution, we separate the lipid vesicle phase from other constituents via ultracentrifuge fractionation and determine the amount of propofol (2,6-diisopropylphenol) using high performance liquid chromatography (HPLC). The results indicate that a nearly negligible amount of API (i.e., NMT 0.25% of labeled content) is present in the lipid vesicles and is thus primarily distributed in the oil phase. As oil droplets are the primary drug carriers and their globule size are similar, the findings of various lipid vesicle composition and sizes among different propofol products do not affect their clinical outcomes.


Subject(s)
Lecithins/chemistry , Lipid Droplets/ultrastructure , Propofol/chemistry , Chromatography, High Pressure Liquid , Cryoelectron Microscopy/methods , Emulsions/chemistry , Lipid Droplets/chemistry , Microscopy, Electron, Transmission/methods , Particle Size , Phospholipids/chemistry , Propofol/analysis , Ultracentrifugation
6.
Sci Rep ; 9(1): 14661, 2019 10 10.
Article in English | MEDLINE | ID: mdl-31601878

ABSTRACT

Extracellular vesicles (EVs) are involved in cell-to-cell communication and modulation of numerous physiological and pathological processes. EVs are found in large quantities in milk and contain several inflammation- and immunity-modulating proteins and microRNAs, through which they exert beneficial effects in several inflammatory disease models. Here, we investigated the effects of two EV subsets, concentrated from commercial cow's milk, on a murine model of colitis induced with dextran sodium sulfate (DSS). P35K EVs, isolated by ultracentrifugation at 35,000 g, and P100K EVs, isolated at 100,000 g, were previously characterized and administered by gavage to healthy and DSS-treated mice. P35K EVs and, to a lesser extent, P100K EVs improved several outcomes associated to DSS-induced colitis, modulated the gut microbiota, restored intestinal impermeability and replenished mucin secretion. Also, P35K EVs modulated innate immunity, while P100K EVs decreased inflammation through the downregulation of colitis-associated microRNAs, especially miR-125b, associated with a higher expression of the NFκB inhibitor TNFAIP3 (A20). These results suggest that different milk EV subsets may improve colitis outcomes through different, and possibly complementary, mechanisms. Further unveiling of these mechanisms might offer new opportunities for improving the life of patients with colitis and be of importance for milk processing, infant milk formulation and general public health.


Subject(s)
Colitis/diet therapy , Dietary Supplements , Extracellular Vesicles/immunology , Intestinal Mucosa/immunology , Milk/cytology , Animals , Colitis/chemically induced , Colitis/immunology , Colitis/pathology , Dextran Sulfate/toxicity , Disease Models, Animal , Gastrointestinal Microbiome/immunology , Humans , Intestinal Mucosa/microbiology , Intestinal Mucosa/pathology , Male , Mice , Milk/immunology , Mucins/metabolism , Ultracentrifugation
7.
Sci Rep ; 8(1): 13350, 2018 09 06.
Article in English | MEDLINE | ID: mdl-30190600

ABSTRACT

Current saliva testing methods rely on cutting edge yet expensive techniques for the detection and analysis of genetic material, proteins and biomarkers for clinical use. However, these techniques are limited in scope and often cannot be used with complex food materials. We propose an efficient ex-vivo tool for evaluating biologically relevant interactions between food components and human saliva using sedimentation velocity analytical ultracentrifugation (SV-AUC). We evaluated macromolecular content from "unstimulated" (US) and "stimulated" (SS) samples pooled from 5 healthy volunteers. Over 90% of total saliva protein consisted of α-amylase and mucin, and up to 10% was secretory immunoglobulin A (SIgA). It was shown that α-amylase concentration increased upon parafilm stimulation, which lead to a decrease in the viscosity of saliva. Then, we used a simple food system (green tea) to evaluate changes in the salivary protein content caused by green tea polyphenols. It was found that aroma release from green tea is highly influenced by interactions between α-amylase and polyphenol epigallocatechin 3-gallate (EGCG). This interaction was found to increase the viscosity of the salivary bulk, suggested to contribute to astringency, and increased the concentrations of ß-ionone, benzaldehyde and isovaleraldehyde (P < 0.01), suggested to play a significant role in the characteristic flavour of green tea.


Subject(s)
Catechin/analogs & derivatives , Saliva/chemistry , Salivary Proteins and Peptides/chemistry , Tea/chemistry , Adult , Catechin/chemistry , Female , Humans , Male , Ultracentrifugation
8.
Food Environ Virol ; 7(4): 381-9, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26264153

ABSTRACT

The objective of this study was to identify sources of fecal contamination in leek and parsley, by using four different F(+)RNA coliphage genogroups (IV, I indicate animal fecal contamination and II, III indicate human fecal contamination). Three different concentrations (10(2), 10(4), 10(6) pfu/ml) of MS2 coliphage were inoculated on the surface of parsley and leek samples for detection of phage recovery efficiency among two methods of elution concentration (PEG-precipitation and Ultracentrifugation) by performing double agar layer (DAL) assay in three replications. Highest recovery of MS2 was observed in PEG method and in 10(6) inoculation concentration. Accordingly, the PEG method was used for washing and isolation of potentially contaminated phages of 30 collected samples (15 samples from the market and 15 samples from the farm). The final solutions of PEG method were tested for the enumeration of plaques by DAL assay. Total RNA was then extracted from recovered phages, and RT-PCR was performed by using four primer sets I, II, III, and IV. Incidence of F(+)RNA coliphages was observed in 12/15 (80 %) and 10/15 (66/6 %) of samples were obtained from farm and market, respectively, using both DAL and RT-PCR test methods. Different genotypes (I, II, and IV) of F(+)RNA coliphages were found in farm samples, while only genotype I was detected in market samples by using the primer sets. Due to the higher frequency of genotype I and IV, the absence of genotype III, and also the low frequency of genotype II, it is concluded that the contamination of vegetable (parsley and leek) in Neyshabour, Iran is most likely originated from animal sources.


Subject(s)
Food Contamination/prevention & control , Food Inspection/methods , Gastroenteritis/virology , Levivirus/isolation & purification , Onions/virology , Petroselinum/virology , RNA, Viral/isolation & purification , Biomarkers/analysis , Chemical Precipitation , Humans , Indicators and Reagents , Iran , Levivirus/classification , Molecular Typing , Onions/economics , Plant Components, Aerial/virology , Polyethylene Glycols/chemistry , RNA, Viral/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Ultracentrifugation , Viral Load
9.
Theriogenology ; 84(1): 118-26, 2015 Jul 01.
Article in English | MEDLINE | ID: mdl-25805694

ABSTRACT

UNLABELLED: The low survival of sheep in vitro-produced (IVP) embryos after cryopreservation is a key limiting step to the widespread of this technology. In the present work, different approaches for enhancing cryosurvival of these embryos were compared: embryo delipidation by centrifugation in the absence or presence of cytochalasin D, a cytoskeleton stabilizer or by embryo culture in the presence of different doses of the trans-10 cis-12-conjugated linoleic acid isomer (CLA). Three experiments were conducted. In experiment 1, IVP blastocysts before vitrification were randomly distributed into four groups: control; centrifuged (cent), cytochalasin D (cyto-D), centrifuged + cytochalasin D (cent + cyto-D). In experiment 2, different doses of CLA (25, 50, and 100 µM) were supplemented during embryo culture before vitrification of blastocysts. A control group ran simultaneously. A third experiment was performed to compare both approaches from the previous ones but without the groups with the worst results (groups: control, cyto-D, cent + cyto-D, CLA25, CLA50). In all experiments, embryos integrity and reexpansion were assessed after warming and after 3 hours of culture. In experiment 1, the postwarming integrity rate was the lowest (P < 0.05) in embryos from the cent group (cent: 50.6 ± 10.3% vs. CONTROL: 74.6 ± 9.2%, cyto-D: 92.3 ± 9.7%, and cent + cyto-D: 90.5 ± 11.2%), whereas the best (P < 0.05) reexpansion scores were obtained in cent + cyto-D embryos (cent + cyto-D: 2.6 ± 0.28 vs. CONTROL: 1.8 ± 0.08, cent: 1.9 ± 0.2, and cyto-D: 1.8 ± 0.31). In experiments 2 and 3, higher (P < 0.05) cleavage rates were observed in CLA25 (50.9 ± 6.2% and 49.2 ± 5.6%, respectively) and CLA50 (48.9 ± 6.2% and 47.6 ± 5.6%, respectively) than those in the control (41.8 ± 6.1% and 40.4 ± 5.4%, respectively) group. In experiment 2, CLA100 presented the lowest (P < 0.002) Day-6 and -7 embryo production rate and quality. After warming, superior (P < 0.02) expansion scores were achieved in CLA25 (3.1 ± 0.29) and CLA50 (3.8 ± 0.17) than in the control (1.9 ± 0.10) group. Similar results were attained in experiment 3. However, although cent + cyto-D embryos showed higher (P = 0.008) postwarming expansion scores than the control (2.8 ± 0.29 vs. 1.9 ± 0.07) group, this score was lower (P = 0.0009) than that in CLA50 embryos (3.8 ± 0.17). In conclusion, our results showed that different protocols of lipid reduction can be successfully applied to improve the cryotolerance of IVP sheep embryos.


Subject(s)
Cryopreservation/veterinary , Fertilization in Vitro/veterinary , Lipid Metabolism , Sheep/embryology , Animals , Cryopreservation/methods , Embryonic Development , Fertilization in Vitro/methods , Ultracentrifugation/veterinary
10.
Protein Cell ; 4(3): 197-210, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23483481

ABSTRACT

Colostrum provides essential nutrients and immunologically active factors that are beneficial to newborns. Our previous work demonstrated that milk contains large amounts of miRNA that is largely stored in milk-derived microvesicles (MVs). In the present study, we found that the MVs from colostrum contain significantly higher levels of several immune-related miRNAs. We hypothesized that the colostrum MVs may transfer the immune-related miRNAs into cells, which contribute to its immune modulatory feature. We isolated colostrum MVs by ultracentrifugation and demonstrated several immune modulation features associated with miRNAs. We also provide evidence that the physical structure of milk-derived MVs is essential for transfer miRNAs and following immune modulation effect. Moreover, we found that colostrum powder-derived MVs also contains higher levels of immune-related miRNAs that display similar immune modulation effects. Taken together, these results show that MV-containing immunerelated miRNAs may be a novel mechanism by which colostrum modulates body immune response.


Subject(s)
Colostrum/metabolism , MicroRNAs/metabolism , Animals , Cattle , Cell Movement , Cell Proliferation , Cytokines/metabolism , Female , Liposomes/chemistry , Liposomes/isolation & purification , Liposomes/metabolism , Macrophages/immunology , Macrophages/metabolism , Mice , MicroRNAs/immunology , Milk/immunology , Milk/metabolism , Phagocytosis , Pregnancy , Ultracentrifugation
11.
J Pharm Sci ; 102(3): 915-28, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23233295

ABSTRACT

Interferon-ß (IFN-ß) products have been used for many years in the treatment of multiple sclerosis and include recombinant IFN-ß-1b (Betaseron®) and IFN-ß-1a (Avonex® and Rebif®). All three products lead to the formation of neutralizing antibodies (NAbs) and resulting loss of efficacy in patients but to different extents. Across several clinical trials, the reported rates of neutralizing-antibody formation were 22%-47% (Betaseron®), 5%-35% (Rebif®), and 2%-13% (Avonex®). In the current study, all products were purchased from the pharmacy and aggregates were characterized and/or quantified using size-exclusion chromatography (SEC), analytical ultracentrifugation, gel electrophoresis, and dot-blotting immunoassays. Particle characterization and counting were performed using microflow imaging, particle tracking analysis, and resonant mass measurement. Betaseron® and Rebif®, which are formulated with human serum albumin, had the greatest amount of aggregated protein and particles (e.g., 9%-15% high molecular weight species by SEC and >100,000 particles/mL by flow imaging). Avonex® was found to have the least amount of aggregated protein, with >95% monomer content by both SEC and analytical ultracentrifugation, and the particles detected in Avonex® were determined to be primarily silicone oil droplets. These results strongly suggest that protein aggregate and particle contents are key product quality attributes in a given product's propensity to elicit the production of NAbs in patients.


Subject(s)
Adjuvants, Immunologic/chemistry , Interferon-beta/chemistry , Antibodies, Neutralizing/immunology , Antibody Formation , Chromatography, Gel , Electrophoresis, Polyacrylamide Gel , Humans , Immunoblotting , Interferon beta-1a , Interferon beta-1b , Interferon-beta/immunology , Particle Size , Ultracentrifugation
12.
Protein & Cell ; (12): 197-210, 2013.
Article in English | WPRIM | ID: wpr-757821

ABSTRACT

Colostrum provides essential nutrients and immunologically active factors that are beneficial to newborns. Our previous work demonstrated that milk contains large amounts of miRNA that is largely stored in milk-derived microvesicles (MVs). In the present study, we found that the MVs from colostrum contain significantly higher levels of several immune-related miRNAs. We hypothesized that the colostrum MVs may transfer the immune-related miRNAs into cells, which contribute to its immune modulatory feature. We isolated colostrum MVs by ultracentrifugation and demonstrated several immune modulation features associated with miRNAs. We also provide evidence that the physical structure of milk-derived MVs is essential for transfer miRNAs and following immune modulation effect. Moreover, we found that colostrum powder-derived MVs also contains higher levels of immune-related miRNAs that display similar immune modulation effects. Taken together, these results show that MV-containing immunerelated miRNAs may be a novel mechanism by which colostrum modulates body immune response.


Subject(s)
Animals , Cattle , Female , Mice , Pregnancy , Cell Movement , Cell Proliferation , Colostrum , Metabolism , Cytokines , Metabolism , Liposomes , Chemistry , Metabolism , Macrophages , Allergy and Immunology , Metabolism , MicroRNAs , Allergy and Immunology , Metabolism , Milk , Allergy and Immunology , Metabolism , Phagocytosis , Ultracentrifugation
13.
J Nanosci Nanotechnol ; 12(9): 7339-45, 2012 Sep.
Article in English | MEDLINE | ID: mdl-23035474

ABSTRACT

The aim of this study was to investigate the physico-chemical properties of cationic niosomes (Tween61/cholesterol/CTAB) loaded with fraction No. 3 of Oryza sativa bran extract (OSF3) at 0.1, 0.5, 1.0 and 2.0% (w/v), respectively, before and after ultra-centrifugation. More white milky translucent appearance of the niosomes was observed at the higher loaded amount of OSF3. The entrapment efficiency of 0.5% OSF3 in niosomes was 86.22 +/- 1.43%. The sizes of the niosomes were slightly increased (120-220 nm) and the zeta potential values were decreased from 80 to the range of 40-60 mV after loaded with OSF3. All niosomes both blank and loaded with OSF3 were in the uni-lamellar structures determined by FF-TEM and SAXS. The transitions temperature (T(c)) of niosomes significant increased from 75 to 80 degrees C when loaded with OSF3 at 0.1 and 0.5%. Moreover, blank niosomes showed the highest microviscosity with the most rigid membrane at 25 degrees C, followed by the niosomes loaded with 0.1, 0.5, 1.0 and 2.0% of OSF3, respectively. The fluorescence polarizations of all niosomal formulations indicated the sharp descending phases at about 40 and 70 degrees C. After ultra-centrifugation to eliminate the non-loaded negatively charged OSF3, the increased vesicular sizes and zeta potential values of the blank, loaded niosomes with 0.1 and 0.5% OSF3 were observed. All niosomal formulations gave the same transition temperatures at about 71 degrees C and the same microviscosities at 25 degrees C. The results from this study can be applied for the niosomal formulation development of the rice bran semi-purified fraction for anti-hair loss products.


Subject(s)
Oryza/chemistry , Plant Extracts/chemistry , Cations , Hot Temperature , Microscopy, Electron, Transmission , Particle Size , Scattering, Small Angle , Ultracentrifugation , Viscosity , X-Ray Diffraction
14.
J Biol Chem ; 287(50): 41963-78, 2012 Dec 07.
Article in English | MEDLINE | ID: mdl-23055529

ABSTRACT

The H(+),K(+)-ATPase pumps protons or hydronium ions and is responsible for the acidification of the gastric fluid. It is made up of an α-catalytic and a ß-glycosylated subunit. The relation between cation translocation and the organization of the protein in the membrane are not well understood. We describe here how pure and functionally active pig gastric H(+),K(+)-ATPase with an apparent Stokes radius of 6.3 nm can be obtained after solubilization with the non-ionic detergent C(12)E(8), followed by exchange of C(12)E(8) with Tween 20 on a Superose 6 column. Mass spectroscopy indicates that the ß-subunit bears an excess mass of 9 kDa attributable to glycosylation. From chemical analysis, there are 0.25 g of phospholipids and around 0.024 g of cholesterol bound per g of protein. Analytical ultracentrifugation shows one main complex, sedimenting at s(20,)(w) = 7.2 ± 0.1 S, together with minor amounts of irreversibly aggregated material. From these data, a buoyant molecular mass is calculated, corresponding to an H(+),K(+)-ATPase α,ß-protomer of 147.3 kDa. Complementary sedimentation velocity with deuterated water gives a picture of an α,ß-protomer with 0.9-1.4 g/g of bound detergent and lipids and a reasonable frictional ratio of 1.5, corresponding to a Stokes radius of 7.1 nm. An α(2),ß(2) dimer is rejected by the data. Light scattering coupled to gel filtration confirms the monomeric state of solubilized H(+),K(+)-ATPase. Thus, α,ß H(+),K(+)-ATPase is active at least in detergent and may plausibly function as a monomer, as has been established for other P-type ATPases, Ca(2+)-ATPase and Na(+),K(+)-ATPase.


Subject(s)
Detergents/chemistry , Gastric Mucosa/enzymology , H(+)-K(+)-Exchanging ATPase/chemistry , Animals , H(+)-K(+)-Exchanging ATPase/isolation & purification , Protein Structure, Quaternary , Solubility , Swine , Ultracentrifugation
15.
Methods Mol Biol ; 926: 383-98, 2012.
Article in English | MEDLINE | ID: mdl-22975977

ABSTRACT

As nanotechnology rapidly emerges into a new industry-driven by its enormous potential to revolutionize electronics, materials, and medicine-exposure of living species to discharged nanoparticles has become inevitable. Despite the increased effort on elucidating the environmental impact of nanotechnology, literature on higher plants exposure to nanoparticles remains scarce and often contradictory. Here we present our biophysical methodologies for the study of carbon nanoparticle uptake by Allium cepa cells and rice plants. We address the three essential aspects for such studies: identification of carbon nanoparticles in the plant species, quantification of nanotransport and aggregation in the plant compartments, and evaluation of plant responses to nanoparticle exposure on the cellular and organism level. Considering the close connection between plant and mammalian species in ecological systems especially in the food chain, we draw a direct comparison on the uptake of carbon nanoparticles in plant and mammalian cells. In addition to the above studies, we present methods for assessing the effects of quantum dot adsorption on algal photosynthesis.


Subject(s)
Biophysics/methods , Environmental Exposure , Nanoparticles/toxicity , Onions/drug effects , Oryza/drug effects , Adsorption/drug effects , Genes, Plant/genetics , Germination/drug effects , HT29 Cells , Humans , Light , Nanoparticles/ultrastructure , Onions/genetics , Onions/ultrastructure , Oryza/genetics , Oryza/growth & development , Particle Size , Photosynthesis/drug effects , Plant Cells/drug effects , Plant Cells/metabolism , Polymerase Chain Reaction , Quantum Dots , Regeneration/drug effects , Scattering, Radiation , Spectrophotometry, Ultraviolet , Spectroscopy, Fourier Transform Infrared , Suspensions , Tissue Distribution/drug effects , Ultracentrifugation
16.
Methods Mol Biol ; 869: 185-95, 2012.
Article in English | MEDLINE | ID: mdl-22585486

ABSTRACT

The potential of capillary electrophoresis-mass spectrometry (CE-MS) for metabolomics is demonstrated through the analysis of metabolites from human HT29 colon cancer cells treated and non-treated with dietary polyphenols. Prior to CE-MS analysis, four different metabolite purification strategies are investigated. Namely, the results obtained after methanol deproteinization, ultrafiltration, and two solid-phase extraction methods using C18 and polymer-based cartridges are described. These generic methods can have broad applications to analyze metabolites in a large variety of matrices and fields, including the new Foodomics area.


Subject(s)
Electrophoresis, Capillary/methods , Plant Extracts/metabolism , Polyphenols/metabolism , Spectrometry, Mass, Electrospray Ionization/methods , Cell Extracts/chemistry , Cell Extracts/isolation & purification , Colonic Neoplasms , Food , Fractional Precipitation , HT29 Cells , Humans , Metabolome , Metabolomics , Methanol/chemistry , Proteins/chemistry , Proteins/isolation & purification , Rosmarinus/chemistry , Solid Phase Extraction/methods , Ultracentrifugation
17.
Acta Pol Pharm ; 69(1): 107-11, 2012.
Article in English | MEDLINE | ID: mdl-22574513

ABSTRACT

Possible complete closure of hydrophilic drug solutions in liposomes with required dimensions is the aim of variety liposome techniques. The ease of separating medication-loaded liposomes from liposome suspension to achieve an appropriate drug concentration in the final preparation is also desired. This paper describes the use of liposome preparation method, called reverse-phase evaporation, which leads to practical achievement of the earlier mentioned objectives. Preparation process is performed in an appropriately designed device. In optimal conditions of liposome preparation the final encapsulation efficiency of hydrophilic drug solution amounted to 50% in liposomes with a diameter in the range of a few micrometers up to 250 nm. The diameter of terminal liposomes is a simple function of relative amount of the lipid used and the degree of emulsion emulsification w/o at the beginning of liposome preparation. The density of the concentrated drug solution trapped in liposomes is usually higher than that of the buffer. Therefore, the loaded liposomes may be easily separated from non-trapped material by using of a simple sedimentation at 30000 x g. Density of aqueous drug solution insufficient to effective centrifugation can be magnified with an appropriate quantity of sucrose solution before encapsulation.


Subject(s)
Glass/chemistry , Glycine max , Lecithins/chemistry , Pharmaceutical Preparations/chemistry , Technology, Pharmaceutical/instrumentation , Chemistry, Pharmaceutical , Drug Compounding , Equipment Design , Hydrogenation , Hydrophobic and Hydrophilic Interactions , Lecithins/isolation & purification , Liposomes , Particle Size , Porosity , Pressure , Solvents/chemistry , Glycine max/chemistry , Technology, Pharmaceutical/methods , Ultracentrifugation
18.
Biochem Med (Zagreb) ; 21(2): 160-6, 2011.
Article in English | MEDLINE | ID: mdl-22135856

ABSTRACT

INTRODUCTION: Lipemic specimens are a common and frequent, but yet unresolved problem in clinical chemistry, and may produce significant interferences in the analytical results of different biochemical parameters. MATERIAL AND METHODS: The aim of this study was to examine the effect of lipid removal using ultracentrifugation of lipemic samples, on some routine biochemistry parameters. Among all the samples obtained daily in our laboratory, the ones which were visibly muddy were selected and underwent to a process of ultracentrifugation, being determined a variety of biochemical tests before and after ultracentrifugation. A total of 110 samples were studied. RESULTS: We found significant differences in all the parameters studied except for total bilirubin, glucose, gamma-glutamyl transferase (GGT) and aspartate aminotransferase (AST). The greatest differences in the parameters analyzed were found in the concentration of alanine aminotransferase (ALT) (7.36%) and the smallest ones in the concentration of glucose (0.014%). Clinically significant interferences were found for phosphorus, creatinine, total protein and calcium. CONCLUSION: Lipemia causes clinically significant interferences for phosphorus, creatinine, total protein and calcium measurement and those interferences could be effectively removed by ultracentrifugation.


Subject(s)
Chemistry, Clinical/methods , Hyperlipidemias/blood , Triglycerides/blood , Ultracentrifugation/methods , Bilirubin/blood , Blood Proteins/analysis , Calcium/blood , Creatinine/blood , Enzymes/blood , Humans , Phosphorus/blood
19.
Zhongguo Zhong Yao Za Zhi ; 36(7): 850-3, 2011 Apr.
Article in Chinese | MEDLINE | ID: mdl-21761720

ABSTRACT

OBJECTIVE: Applying for the activity of enzyme in vitro,the research optimized the best preparation procedure for the anticoagulated blood region from Lumbricus. METHOD: All through our experiment, the content of protein and theactivity of enzyme were examined. The extraction process, the refining technology, concentration processes of Lumbricus were optimized with single factor checking and orthogonal design method. RESULT: At 37 degrees C, the coarse powder of Lumbricus soaking with 15 fold of 0.9% sodium chloride and ultrasonic extracting 40 minites for three times was the best ultrasonic extraction. Utrafiltration membrane with molecular weights of 30 x 10(3) for refining and 10 x 10(3) for concentrating were selected. CONCLUSION: Ultrasonic extraction and membrane separation technology, to well improve the effect of purification for the anticoagulant site of Lumbricus, is conducive to further study.


Subject(s)
Anticoagulants/isolation & purification , Drug Compounding/methods , Oligochaeta/chemistry , Animals , Anticoagulants/chemistry , Oligochaeta/enzymology , Temperature , Ultracentrifugation , Ultrasonics
20.
Methods ; 54(1): 136-44, 2011 May.
Article in English | MEDLINE | ID: mdl-21276851

ABSTRACT

In 1962 H. Fujita (H. Fujita, Mathematical Theory of Sedimentation Analysis, Academic Press, New York, 1962) examined the possibility of transforming a quasi-continuous distribution g(s) of sedimentation coefficient s into a distribution f(M) of molecular weight M for linear polymers using the relation f(M)=g(s)·(ds/dM) and showed that this could be done if information about the relation between s and M is available from other sources. Fujita provided the transformation based on the scaling relation s=κ(s)M(0.5), where κ(s) is taken as a constant for that particular polymer and the exponent 0.5 essentially corresponds to a randomly coiled polymer under ideal conditions. This method has been successfully applied to mucus glycoproteins (S.E. Harding, Adv. Carbohyd. Chem. Biochem. 47 (1989) 345-381). We now describe an extension of the method to general conformation types via the scaling relation s=κM(b), where b=0.4-0.5 for a coil, ∼0.15-0.2 for a rod and ∼0.67 for a sphere. We give examples of distributions f(M) versus M obtained for polysaccharides from SEDFIT derived least squares g(s) versus s profiles (P. Schuck, Biophys. J. 78 (2000) 1606-1619) and the analytical derivative for ds/dM performed with Microcal ORIGIN. We also describe a more direct route from a direct numerical solution of the integral equation describing the molecular weight distribution problem. Both routes give identical distributions although the latter offers the advantage of being incorporated completely within SEDFIT. The method currently assumes that solutions behave ideally: sedimentation velocity has the major advantage over sedimentation equilibrium in that concentrations less than 0.2mg/ml can be employed, and for many systems non-ideality effects can be reasonably ignored. For large, non-globular polymer systems, diffusive contributions are also likely to be small.


Subject(s)
Polymers/chemistry , Polysaccharides/chemistry , Ultracentrifugation/methods , Alginates/chemistry , Chitosan/chemistry , Glucans/chemistry , Glucuronic Acid/chemistry , Glycoconjugates/chemistry , Hexuronic Acids/chemistry , Mannans/chemistry , Models, Chemical , Molecular Weight , Mucins/chemistry , Pectins/chemistry , Polysaccharides, Bacterial/chemistry , Vaccines, Conjugate/chemistry
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