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Curr Microbiol ; 69(6): 846-51, 2014 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-25086582

RESUMEN

The complete nucleotide sequence of a small cryptic plasmid pLK39 isolated from endophytic Salmonella sp. was determined. This plasmid is 4,029 bp long with an overall GC content of 55.4 %. Sequence analyses of pLK39 revealed extensive homology to several plasmids: pRK10, pK, pSW200, pBERT, pST728/06-2, pSW100, pEC3, and pUCD5000. Using the ORF Finder program, 35 putative ORFs was identified, 30 showed more than 35 residues. After performing a search for homologous sequences to the pLK39 at BLASTn software on NCBI, it was ascertained that the plasmid has a ColE1-like replication origin and also a region of mobilization proteins from relaxase family (mobCABD). Besides these mobilization proteins, the pLK39 codes a putative DUF903 protein family, which is characterized as assumed external cytoplasmic membrane lipoprotein. A recombinant form of pLK39 carrying a kanamycin resistance gene is stably maintained in Escherichia coli cells grown in the absence of selection pressure. pLK39 was compatible with pUC18, pBR322, and pACYC184.


Asunto(s)
Endófitos/genética , Endófitos/aislamiento & purificación , Plásmidos , Salmonella/genética , Salmonella/aislamiento & purificación , Análisis de Secuencia de ADN , Solanum/microbiología , Composición de Base , Secuencia de Bases , Datos de Secuencia Molecular , Sistemas de Lectura Abierta , Origen de Réplica , Homología de Secuencia de Ácido Nucleico
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