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1.
Anal Chem ; 90(10): 6043-6050, 2018 05 15.
Artículo en Inglés | MEDLINE | ID: mdl-29565564

RESUMEN

Cross-linking/Mass spectrometry (XLMS) is a consolidated technique for structural characterization of proteins and protein complexes. Despite its success, the cross-linking chemistry currently used is mostly based on N-hydroxysuccinimide (NHS) esters, which react primarily with lysine residues. One way to expand the current applicability of XLMS into several new areas is to increase the number of cross-links obtainable for a target protein. We introduce a multiplex chemistry (denoted XPlex) that targets Asp, Glu, Lys, and Ser residues. XPlex can generate significantly more cross-links with reactions occurring at lower temperatures and enables targeting proteins that are not possible with NHS ester-based cross-linkers. We demonstrate the effectiveness of our approach in model proteins as well as a target Lys-poor protein, SalBIII. Identification of XPlex spectra requires a search engine capable of simultaneously considering multiple cross-linkers on the same run; to achieve this, we updated the SIM-XL search algorithm with a search mode tailored toward XPlex. In summary, we present a complete chemistry/computational solution for significantly increasing the number of possible distance constraints by mass spectrometry experiments, and thus, we are convinced that XPlex poses as a real complementary approach for structural proteomics studies.


Asunto(s)
Ácido Aspártico/análisis , Biología Computacional , Reactivos de Enlaces Cruzados/química , Ácido Glutámico/análisis , Lisina/análisis , Serina/análisis , Algoritmos , Ésteres/química , Espectrometría de Masas , Proteínas/química , Succinimidas/química , Temperatura
2.
Peptides ; 80: 18-24, 2016 06.
Artículo en Inglés | MEDLINE | ID: mdl-26056922

RESUMEN

The scorpion Tityus serrulatus venom comprises a complex mixture of molecules that paralyzes and kills preys, especially insects. However, venom components also interact with molecules in humans, causing clinic envenomation. This cross-interaction may result from homologous molecular targets in mammalians and insects, such as (NEP)-like enzymes. In face of these similarities, we searched for peptides in Tityus serrulatus venom using human NEP as a screening tool. We found a NEP-inhibiting peptide with the primary sequence YLPT, which is very similar to that of the insect neuropeptide proctolin (RYLPT). Thus, we named the new peptide [des-Arg(1)]-proctolin. Comparative NEP activity assays using natural substrates demonstrated that [des-Arg(1)]-proctolin has high specificity for NEP and better inhibitory activity than proctolin. To test the initial hypothesis that molecular homologies allow Tityus serrulatus venom to act on both mammal and insect targets, we investigated the presence of a NEP-like in cockroaches, the main scorpion prey, that could be likewise inhibited by [des-Arg(1)]-proctolin. Indeed, we detected a possible NEP-like in a homogenate of cockroach heads whose activity was blocked by thiorphan and also by [des-Arg(1)]-proctolin. Western blot analysis using a human NEP monoclonal antibody suggested a NEP-like enzyme in the homogenate of cockroach heads. Our study describes for the first time a proctolin-like peptide, named [des-Arg(1)]-proctolin, isolated from Tityus serrulatus venom. The tetrapeptide inhibits human NEP activity and a NEP-like activity in a cockroach head homogenate, thus it may play a role in human envenomation as well as in the paralysis and death of scorpion preys.


Asunto(s)
Inhibidores Enzimáticos/farmacología , Neuropéptidos/química , Neuropéptidos/farmacología , Oligopéptidos/química , Oligopéptidos/farmacología , Venenos de Escorpión/química , Animales , Western Blotting , Cucarachas/enzimología , Evaluación Preclínica de Medicamentos/métodos , Inhibidores Enzimáticos/química , Cabeza , Humanos , Hidrólisis , Neprilisina/antagonistas & inhibidores , Escorpiones/química , Tiorfan/farmacología
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