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1.
Food Chem ; 447: 138989, 2024 Jul 30.
Artículo en Inglés | MEDLINE | ID: mdl-38492297

RESUMEN

Limonin is an intensely bitter and highly oxidized tetracyclic triterpenoid secondary metabolite, which is abundant in the Rutaceae and Meliaceae, especially in Citrus. In order to detect limonin content in complex substrates such as citrus and traditional Chinese medicine, monoclonal antibodies specifically recognizing limonin were prepared and an indirect competitive enzyme-linked immunosorbent assay (icELISA) was established. The median inhibition concentration (IC50) was 5.40 ng/mL and the linear range was 1.25-23.84 ng/mL. The average recoveries from citrus peel and pulp samples were 95.9%-118.8% and 77.5%-113.1%, respectively. Moreover, the contents of limonin in 6 citrus samples and 4 herbal samples were analyzed by icELISA and UPLC-MS, and the results of the two methods were consistent. This validation is sufficient to demonstrate that the developed immunoassay is applicable for the detection of limonin in citrus and herbal samples and has the advantage of high efficiency, sensitivity, and convenience.


Asunto(s)
Citrus , Limoninas , Anticuerpos Monoclonales , Limoninas/análisis , Ensayo de Inmunoadsorción Enzimática/métodos , Citrus/química , Cromatografía Liquida , Espectrometría de Masas en Tándem
2.
J Environ Manage ; 337: 117658, 2023 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-37011477

RESUMEN

There are approximately 4 billion tons of uranium in the ocean, which is unmatched by the surface. Nevertheless, it's very challenging to extract uranium from the ocean due to the exceedingly low concentration of uranium in the ocean (about 3.3 µg L-1) as well as high salinity level. Current methods are often limited by selectivity, sustainability, economics, etc. Herein, phosphoric acid group and amidoxime group were grafted to skin collagen fibers through " initiated access" to design a new uranium extraction material, abbreviated as CGPA. Through laboratory simulation experiments, it is concluded that the maximum adsorption capacity of CGPA for uranium reaches 263.86 mg g-1. It has high adsorption, selectivity, and reusability for uranium. In the actual seawater extraction experiment, CGPA obtained 29.64 µg of uranium after extracting 10.0 L of seawater, and the extraction rate was 90.1%. The adsorbent has excellent effects in kinetics, selectivity, extraction capacity, renewability, etc. In the extraction of uranium from seawater, and is an economically feasible and industrially expandable adsorbent.


Asunto(s)
Uranio , Fosfatos , Biomasa , Agua de Mar , Adsorción
3.
Sci Total Environ ; 858(Pt 3): 159861, 2023 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-36397603

RESUMEN

Microbial diversity and activities in petroleum reservoir systems can be altered by water-flooding operation, but the current understanding of the mechanism for such changes in microbial composition characteristics and community is inadequate. In this study, microbial communities especially functional groups in production water from five petroleum reservoirs in China were investigated by chemical and molecular biological analyses. The dominant and core phyla in the five oil reservoirs were Proteobacteria, Deferribacterota, Firmicutes, Desulfobacterota, Euryarchaeota and Thermoplasmatota. At the genus level, the dominant taxa in each petroleum reservoir were different, and not all of the dominant genera were the core members across the five oil reservoirs. The microbiologically influenced corrosion (MIC) were investigated for the functional groups in each production water. The corrosion rates in production water were higher than controls with a positive correlation to the abundances of sulfate-reducing prokaryotes (SRP). The SRP diversity based on the aprA and dsrA gene analysis showed that obvious differences were evident between onshore (JS, SL, DQ and XJ) and offshore (BS) oilfields. The core SRP taxa in onshore oilfields were Desulfomicrobium and Desulfovibrio, also with Desulfotomaculum in medium/low-temperature oil reservoirs (DQ and XJ), but in high-temperature petroleum reservoirs (JS, BS and SL), Archaeoglobus, Thermodesulfobacterium and Thermodesulfovibrio were the core groups. Statistical analysis indicated that temperature, electron acceptors and donors showed significant influence on the SRP community. This research reveals the characteristics of microbial and functional community as well as their interaction mechanism on corrosion in petroleum reservoir environments, and will improve industrial bio-control and management of MIC in oilfields.


Asunto(s)
Microbiota , Petróleo , Sulfatos , Agua , China
4.
J Diabetes Res ; 2022: 7802107, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35187178

RESUMEN

Shenlian (SL) decoction is a herbal formula composed of Coptis and ginseng, of which berberine and ginsenoside are the main constituents. Even though SL decoction is widely used in treating diabetes in China, the mechanism of its antidiabetes function still needs further study. Gut microbiota disorder is one of the important factors that cause diabetes. To explore the effect of SL decoction on intestinal microbiota, gut microbiota of mice was analyzed by sequencing the gut bacterial 16S rRNA V3+V4 region and metagenomics. In this study, results demonstrated that SL decoction had a better hypoglycemic effect and ß cell protection effect than either ginseng or Coptis chinensis. Alpha diversity analysis showed that all interventions with ginseng, Coptis, and SL decoction could reverse the increased diversity and richness of gut microbiota in db/db mice. PCoA analysis showed oral SL decoction significantly alters gut microbiota composition in db/db mice. 395 OTUs showed significant differences after SL treatment, of which 37 OTUs enriched by SL decoction showed a significant negative correlation with FBG, and 204 OTUs decreased by SL decoction showed a significant positive correlation with FBG. Results of KEGG analysis and metagenomic sequencing showed that SL decoction could reduce the Prevotellaceae, Rikenellaceae, and Helicobacteraceae, which were related to lipopolysaccharide biosynthesis, riboflavin metabolism, and peroxisome, respectively. It could also upregulate the abundance of Bacteroidaceae, which contributed to the metabolism of starch and sucrose as well as pentose-glucuronate interconversions. In the species level, SL decoction significantly upregulates the relative abundance of Bacteroides_acidifaciens which showed a significant negative correlation with FBG and was reported to be a potential agent for modulating metabolic disorders such as diabetes and obesity. In conclusion, SL decoction was effective in hypoglycemia and its mechanism may be related to regulating gut microbiota via upregulating Bacteroides_acidifaciens.


Asunto(s)
Glucemia/efectos de los fármacos , Coptis/metabolismo , Microbioma Gastrointestinal/efectos de los fármacos , Medicina Tradicional China/normas , Panax/metabolismo , Animales , Glucemia/metabolismo , China , Modelos Animales de Enfermedad , Microbioma Gastrointestinal/fisiología , Medicina Tradicional China/métodos , Ratones , Ratones Endogámicos C57BL/metabolismo
5.
Comb Chem High Throughput Screen ; 25(4): 587-606, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-33949930

RESUMEN

BACKGROUND: Rheumatoid arthritis (RA) is a chronic autoimmune disease, which affects the joints and causes significant pain, impairing patient's quality of life. Strychni semen showed promising results to treat RA. However, there are increasing safety concerns in using strychni semen due to its severe toxicity. AIM AND OBJECTIVE: The purpose of this review is to provide insight into using Strychni semen as an alternative medicine to treat RA, as well as to offer a method for the safe application of Strychni semen through processing and compatibility studies. METHODS: Publications were retrieved and surveyed from CNKI and PubMed relevant to Strychni semen for a literature review. RESULTS: This article summarized the mechanism of function of strychni semen in treating RA with its anti-inflammatory, analgesic, and immunomodulatory effect. Commonly used methods to attenuate the toxicity of Strychni semen were also discussed in this article. CONCLUSION: Strychni semen has a good therapeutic effect on RA, mainly by the modulation of immunity with anti-inflammatory and analgesic effects. Also, the reported toxicity of strychni semen can be effectively reduced by processing and compatibility methods. Hence, as an alternative medicine for RA treatment, strychni semen has a broad prospect.


Asunto(s)
Artritis Reumatoide , Preparaciones de Plantas , Semillas , Artritis Reumatoide/tratamiento farmacológico , Humanos , Preparaciones de Plantas/uso terapéutico , Calidad de Vida , Semillas/química
6.
Front Pharmacol ; 12: 764994, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-35002703

RESUMEN

The exacerbation of oxidative and inflammatory reactions has been involved in atherosclerotic cardiovascular diseases leading to morbidity and mortality worldwide. Discovering the underlying mechanisms and finding optimized curative approaches to control the global prevalence of cardiovascular diseases is needed. Growing evidence has demonstrated that gut microbiota is associated with the development of atherosclerosis, while berberine, a natural product exhibits antiatherogenic effects in clinical and pre-clinical studies, which implies a potential link between berberine and gut microbiota. In light of these novel discoveries, evidence of the role of berberine in modulating atherosclerosis with a specific focus on its interaction with gut microbiota is collected. This review synthesizes and summarizes antioxidant and anti-inflammatory effects of berberine on combating atherosclerosis experimentally and clinically, explores the interaction between berberine and intestinal microbiota comprehensively, and provides novel insights of berberine in managing atherosclerotic cardiovascular diseases via targeting the gut-heart axis mechanistically. The phenomenon of how berberine overcomes its weakness of poor bioavailability to conduct its antiatherogenic properties is also discussed and interpreted in this article. An in-depth understanding of this emerging area may contribute to identifying therapeutic potentials of medicinal plant and natural product derived pharmaceuticals for the prevention and treatment of atherosclerotic cardiovascular diseases in the future.

7.
J Ethnopharmacol ; 269: 113696, 2021 Apr 06.
Artículo en Inglés | MEDLINE | ID: mdl-33358854

RESUMEN

ETHNOPHARMACOLOGICAL RELEVANCE: Si-Wu-Tang (SWT), a prestigious herbal formula from China, has been extensively used for centuries for female-related diseases. It has been documented that SWT has a significant inhibitory effect on non-triple-negative breast cancer (non-TNBC) cells. However, there has been limited comprehensive analysis of the targeted effects of the anticancer components of SWT and its exact biological mechanism. AIM OF THE STUDY: This study aims to uncover the mechanism by which SWT treats non-TNBC by applying a network pharmacological method combined with experimental validation. MATERIALS AND METHODS: First, SWT compounds were collected from the Traditional Chinese Medicines Systems Pharmacology database (TCMSP) and The Encyclopedia of Traditional Chinese Medicine (ETCM), and then the targets related to SWT were obtained from the TCMSP and SwissTarget databases. Second, a target data set of non-TNBC proteins was established by using the Online Mendelian Inheritance in Man (OMIM), GeneCards and Gene Expression Omnibus (GEO) databases. Third, based on the overlap of targets between SWT and non-TNBC, a protein-protein interaction (PPI) network was built to analyse the interactions among these targets, which focused on screening for hub targets by topology. On these hub genes, we conducted a meta-analysis and survival analysis to screen the best match targets, ESR1, PPARG, CAT, and PTGS2, which had a strong correlation with the ingredients of SWT in our verification by molecular docking. In vitro experiments further proved the reliability of the network pharmacology findings. Finally, FunRich software and the ClusterProfiler package were utilized for the enrichment analysis of Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) data. RESULTS: A total of 141 active ingredients and 116 targets of SWT were selected. GO enrichment analysis showed that the biological processes through which SWT acted against non-TNBC (FDR<0.01) mainly involved modulating energy metabolism and apoptosis. According to RT-qPCR and Western blotting, the mRNA and protein expression of ESR1, PPARG and PTGS2 were upregulated (P < 0.01), and the mRNA and protein levels of CAT were downregulated (P < 0.01), suggesting a multi-gene regulatory molecular mechanism of SWT against non-triple-negative breast cancer. CONCLUSIONS: This research explored the multi-gene pharmacological mechanism of action of SWT against non-TNBC through network pharmacology and in vitro experiments. The findings provide new ideas for research on the mechanism of action of Chinese medicine against breast cancer.


Asunto(s)
Antineoplásicos Fitogénicos/química , Antineoplásicos Fitogénicos/farmacología , Neoplasias de la Mama/tratamiento farmacológico , Medicamentos Herbarios Chinos/química , Medicamentos Herbarios Chinos/farmacología , Apoptosis/efectos de los fármacos , Catalasa/biosíntesis , Catalasa/genética , Ciclooxigenasa 2/genética , Bases de Datos de Compuestos Químicos , Bases de Datos Genéticas , Metabolismo Energético/efectos de los fármacos , Receptor alfa de Estrógeno/biosíntesis , Receptor alfa de Estrógeno/genética , Femenino , Regulación Neoplásica de la Expresión Génica , Redes Reguladoras de Genes , Humanos , Estimación de Kaplan-Meier , Células MCF-7 , Medicina Tradicional China/métodos , Simulación del Acoplamiento Molecular , PPAR gamma/biosíntesis , PPAR gamma/genética , Unión Proteica , Mapas de Interacción de Proteínas
8.
Mikrochim Acta ; 187(6): 355, 2020 05 28.
Artículo en Inglés | MEDLINE | ID: mdl-32468159

RESUMEN

Novel colorimetric and ratiometric fluorometric dual-mode N, P-co-doped carbon nanodots, BPEI-CDs, for highly sensitive and selective detection of formaldehyde (FA) were successfully prepared from N-(phosphonomethyl)iminodiacetic acid (PMIDA) and branched polyethyleneimine (BPEI). The treatment of FA caused a remarkable linear enhancement of ratiometric fluorescence (F501 nm/F408 nm) in a wide range of 0-40 µM with a detection limit (LOD) of 0.47 µM (3σ/k), along with distinct color changes from colorless to light yellow. Mechanistic study shows that this electron-rich system, formed by the cooperative roles of N and P, promoted the FA-induced Schiff bases formation reaction, which contributed to the CD aggregation-induced emission (AIE) "turn-on" response and enhancement of π-conjugation-induced bathochromic behaviors. Furthermore, N, P-co-doped BPEI-CDs were successfully applied to the determination of FA in bean sprout samples. Using the standard addition method, the recoveries ranged from 96.9 to 101.8%, and the relative standard deviation (RSD) was in the range 2.23 to 3.21%. The application for intracellular FA sensing further verified that this novel nanoprobe may offer a new venue for the design of simple, low-cost, and sensitive biosensors. Graphical abstract.


Asunto(s)
Colorimetría/métodos , Colorantes Fluorescentes/química , Formaldehído/análisis , Puntos Cuánticos/química , Espectrometría de Fluorescencia/métodos , Carbono/química , Carbono/toxicidad , Línea Celular Tumoral , Fluorescencia , Colorantes Fluorescentes/toxicidad , Humanos , Límite de Detección , Microscopía Confocal , Microscopía Fluorescente , Nitrógeno/química , Nitrógeno/toxicidad , Fósforo/química , Fósforo/toxicidad , Puntos Cuánticos/toxicidad , Plantones/química
9.
Am J Chin Med ; 48(2): 391-406, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-32138534

RESUMEN

The purpose of this study was to evaluate the effects of diosgenin on the D-galactose-induced cerebral cortical widely dispersed apoptosis. Male 12-week-old Wistar rats were divided into four groups: Control (1mg/kg/day of saline, i.p.), DD0 (150mg/kg/day of D-galactose, i.p.), DD10, and DD50 (D-galactose+10 or 50mg/kg/day of diosgenin orally). After eight weeks, histopathological analysis, positive TUNEL and Western blotting assays were performed on the excised cerebral cortex from all four groups. The TUNEL-positive apoptotic cells, the components of Fas pathway (Fas, FADD, active caspase-8 and active caspase-3), and mitochondria pathway (t-Bid, Bax, cytochrome c, active caspase-9 and active caspase-3) were increased in the DD0 group compared with the control group, whereas they were decreased in the DD50 group. The components of survival pathway (p-Bad, Bcl-2, Bcl-xL, IGF-1, p-PI3K and p-AKT) were increased in the DD50 group compared to the control group, whereas the levels of Bcl-xL, p-PI3K, and p-AKT were also compensatorily increased in the DD0 group compared to the control group. Taken together, diosgenin suppressed D-galactose-induced neuronal Fas-dependent and mitochondria-dependent apoptotic pathways and enhanced the Bcl-2 family associated pro-survival and IGF-1-PI3K-AKT survival pathways, which might provide neuroprotective effects of diosgenin for prevention of the D-galactose-induced aging brain.


Asunto(s)
Envejecimiento , Apoptosis/efectos de los fármacos , Diosgenina/farmacología , Fármacos Neuroprotectores , Animales , Encéfalo/metabolismo , Caspasa 3/metabolismo , Caspasa 8/metabolismo , Proteína de Dominio de Muerte Asociada a Fas/metabolismo , Factor I del Crecimiento Similar a la Insulina/metabolismo , Masculino , Mitocondrias/metabolismo , Fosfatidilinositol 3-Quinasas/metabolismo , Proteínas Proto-Oncogénicas c-akt/metabolismo , Proteínas Proto-Oncogénicas c-bcl-2/metabolismo , Ratas Wistar , Transducción de Señal/efectos de los fármacos , Receptor fas/metabolismo
10.
Bioorg Chem ; 92: 103199, 2019 11.
Artículo en Inglés | MEDLINE | ID: mdl-31446241

RESUMEN

Ginkgo Biloba leaf extract has been widely used for the prevention and treatment of thrombosis and cardiovascular disease in both eastern and western countries, but the bioactive constituents and the underlying mechanism of anti-thrombosis have not been fully characterized. The purpose of this study was to investigate the inhibitory effects of major constituents in Ginkgo biloba on human thrombin, a key serine protease regulating the blood coagulation cascade and the processes of thrombosis. To this end, a fluorescence-based biochemical assay was used to assay the inhibitory effects of sixteen major constituents from Ginkgo biloba on human thrombin. Among all tested natural compounds, four biflavones (ginkgetin, isoginkgetin, bilobetin and amentoflavone), and five flavonoids (luteolin, apigenin, quercetin, kaempferol and isorhamnetin) were found with thrombin inhibition activity, with the IC50 values ranging from 8.05 µM to 82.08 µM. Inhibition kinetic analyses demonstrated that four biflavones were mixed inhibitors against thrombin-mediated Z-GGRAMC acetate hydrolysis, with the Ki values ranging from 4.12 µM to 11.01 µM. Molecular docking method showed that the four biflavones could occupy the active cavity with strong interactions of salt bridges and hydrogen bonds. In addition, mass spectrometry-based lysine labeling reactivity assay suggested that the biflavones could bind on human thrombin at exosite I rather than exosite II. All these findings suggested that the biflavones in Ginkgo biloba were naturally occurring inhibitors of human thrombin, and these compounds could be used as lead compounds for the development of novel thrombin inhibitors with improved efficacy and high safety profiles.


Asunto(s)
Flavonas/química , Ginkgo biloba/química , Hemostáticos/química , Extractos Vegetales/química , Hojas de la Planta/química , Inhibidores de Serina Proteinasa/química , Trombina/antagonistas & inhibidores , Sitios de Unión , Evaluación Preclínica de Medicamentos , Flavonas/metabolismo , Hemostáticos/farmacología , Humanos , Cinética , Lisina/metabolismo , Simulación del Acoplamiento Molecular , Estructura Molecular , Extractos Vegetales/metabolismo , Unión Proteica , Inhibidores de Serina Proteinasa/metabolismo , Relación Estructura-Actividad , Espectrometría de Masas en Tándem
11.
Mol Med Rep ; 19(6): 4589-4596, 2019 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-30942399

RESUMEN

The transforming growth factor­ß (TGF­ß) signaling pathway is an important regulatory pathway in renal fibrosis and is abnormally activated in glomerulosclerosis. Quercetin is a common Chinese herbal medicine and has been reported to inhibit TGF­ß signaling pathway activation. In the present study a glomerulosclerosis rat model was constructed and mice were treated with different concentrations of quercetin. Biochemical parameters, pathological indices and expression levels of TGF­ß signaling pathway­associated proteins were detected using immunohistochemistry and western blotting. It was demonstrated that quercetin significantly improved physiological indices and altered the expression levels of TGF­ß signaling pathway­associated proteins in rats with glomerulosclerosis. In conclusion, quercetin can regulate the TGF­ß signaling pathway and reduce the progression of glomerulosclerosis.


Asunto(s)
Enfermedades Renales/tratamiento farmacológico , Quercetina/farmacología , Factor de Crecimiento Transformador beta/metabolismo , Animales , Biomarcadores/sangre , Modelos Animales de Enfermedad , Relación Dosis-Respuesta a Droga , Riñón/efectos de los fármacos , Riñón/metabolismo , Masculino , Ratones , Ratas , Ratas Sprague-Dawley , Transducción de Señal , Factor de Crecimiento Transformador beta/antagonistas & inhibidores
12.
Appl Microbiol Biotechnol ; 103(5): 2391-2401, 2019 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-30610291

RESUMEN

Branched alkanes are important constituents of crude oil and are usually regarded as resistant to microbial degradation, resulting in little knowledge of biochemical processes involved in anaerobic branched alkanes biodegradation. Here, we initiated an incubation study by amendment of iso-C9 (2-methyl, 3-methyl, and 4-methyloctane) as substrates for methanogenic degradation in production water from a high-temperature petroleum reservoir. Over an incubation period of 367 days, significant methanogenesis was observed in samples amended with these branched alkanes. The strong methanogenic activity only observed in iso-C9 amendments suggested the presence of microbial transformation from iso-alkanes into methane. GC-MS-based examination of the original production water identified an intermediate tentatively to be iso-C9-like alkylsuccinate, but was not detected in the enrichment cultures, combined with the successful amplification of assA functional gene in inoculating samples, revealing the ability of anaerobic biodegradation of iso-C9 via fumarate addition pathway. Microorganisms affiliated with members of the Firmicutes, Synergistetes, and methanogens of genus Methanothermobacter spp. were highly enriched in samples amended with iso-C9. The co-occurrence of known syntrophic acetate oxidizers Thermoacetogenium spp. and Methanothermobacter spp. (known hydrogenotrophic methanogens) indicates a potential syntrophic acetate oxidation associated with the methanogenic biodegradation of iso-C9. These results provide some useful information on the potential biodegradation of branched alkanes via methanogenesis and also suggest that branched alkanes are likely activated via fumarate addition in high-temperature petroleum reservoirs.


Asunto(s)
Alcanos/metabolismo , Biodegradación Ambiental , Firmicutes/metabolismo , Metano/biosíntesis , Methanobacteriaceae/metabolismo , Petróleo/metabolismo , Crecimiento Quimioautotrófico , Calor , Yacimiento de Petróleo y Gas , Agua/química
13.
Nat Commun ; 9(1): 3212, 2018 08 10.
Artículo en Inglés | MEDLINE | ID: mdl-30097580

RESUMEN

ARID1A, a component of the SWI/SNF chromatin remodeling complex, is a tumor suppressor with a high frequency of inactivating mutations in many cancers. Therefore, ARID1A deficiency has been exploited therapeutically for treating cancer. Here we show that ARID1A has a synthetic lethal interaction with aurora kinase A (AURKA) in colorectal cancer (CRC) cells. Pharmacological and genetic perturbations of AURKA selectively inhibit the growth of ARID1A-deficient CRC cells. Mechanistically, ARID1A occupies the AURKA gene promoter and negatively regulates its transcription. Cells lacking ARID1A show enhanced AURKA transcription, which leads to the persistent activation of CDC25C, a key protein for G2/M transition and mitotic entry. Inhibiting AURKA activity in ARID1A-deficient cells significantly increases G2/M arrest and induces cellular multinucleation and apoptosis. This study shows a novel synthetic lethality interaction between ARID1A and AURKA and indicates that pharmacologically inhibiting the AURKA-CDC25C axis represents a novel strategy for treating CRC with ARID1A loss-of-function mutations.


Asunto(s)
Aurora Quinasa A/metabolismo , Neoplasias Colorrectales/genética , Proteínas Nucleares/deficiencia , Transducción de Señal , Mutaciones Letales Sintéticas/genética , Factores de Transcripción/deficiencia , Fosfatasas cdc25/metabolismo , Animales , Apoptosis , Aurora Quinasa A/antagonistas & inhibidores , Aurora Quinasa A/genética , Neoplasias Colorrectales/patología , Proteínas de Unión al ADN , Evaluación Preclínica de Medicamentos , Femenino , Fase G2 , Técnicas de Inactivación de Genes , Humanos , Ratones Endogámicos BALB C , Ratones Desnudos , Mitosis , Proteínas Nucleares/metabolismo , Factores de Transcripción/metabolismo , Transcripción Genética
14.
ACS Nano ; 10(4): 3985-94, 2016 04 26.
Artículo en Inglés | MEDLINE | ID: mdl-27019102

RESUMEN

Here, we present an experimental demonstration of slowing DNA translocation across a nanochannel by modulating the channel surface charge through an externally applied gate bias. The experiments were performed on a nanofluidic field-effect transistor, which is a monolithic integrated platform featuring a 50 nm-diameter in-plane alumina nanocapillary whose entire length is surrounded by a gate electrode. The field-effect transistor behavior was validated on the gating of ionic conductance and protein transport. The gating of DNA translocation was subsequently studied by measuring discrete current dips associated with single λ-DNA translocation events under a source-to-drain bias of 1 V. The translocation speeds under various gate bias conditions were extracted by fitting event histograms of the measured translocation time to the first passage time distributions obtained from a simple 1D biased diffusion model. A positive gate bias was observed to slow the translocation of single λ-DNA chains markedly; the translocation speed was reduced by an order of magnitude from 18.4 mm/s obtained under a floating gate down to 1.33 mm/s under a positive gate bias of 9 V. Therefore, a dynamic and flexible regulation of the DNA translocation speed, which is vital for single-molecule sequencing, can be achieved on this device by simply tuning the gate bias. The device is realized in a conventional semiconductor microfabrication process without the requirement of advanced lithography, and can be potentially further developed into a compact electronic single-molecule sequencer.


Asunto(s)
ADN/análisis , Nanoporos , Óxido de Aluminio/química , Simulación por Computador , Difusión , Electrodos , Campos Electromagnéticos , Iones/química , Microfluídica/instrumentación , Análisis de Secuencia de ADN/instrumentación , Propiedades de Superficie
15.
Zhongguo Zhong Yao Za Zhi ; 40(7): 1291-5, 2015 Apr.
Artículo en Chino | MEDLINE | ID: mdl-26281549

RESUMEN

L9 (3(4)) orthogonal experiment was used to design the extraction technology of compound Clematidis Radix spray. Weight coefficients of active ingredients and dry extract rate were solved by information entropy. Support vector machine (SVM) was established and the model parameters were optimized through the genetic algorithm. Grid search algorithm was used for optimization of extraction technology of Clematidis Radix spray. The optimal extraction technology was to extract Clematidis Radix spray in water with 6 times the weight of herbal medicine for 3 times, with 2 h once. Bias of value between real and predicted by SVM was 1.23%. SVM was compared with traditional intuitive analysis of orthogonal design. It indicates that the new method used to optimize the extraction parameters of compound Clematidis Radix spray is more accurate and reliable.


Asunto(s)
Clematis/química , Medicamentos Herbarios Chinos/aislamiento & purificación , Medicamentos Herbarios Chinos/química , Raíces de Plantas/química , Máquina de Vectores de Soporte , Tecnología Farmacéutica
16.
Meat Sci ; 110: 293-301, 2015 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-26319310

RESUMEN

The effects of feeding ß-carotene (ßC) on levels of ßC and vitamin A (retinol) in blood and tissues, and on beef quality, were evaluated in 120 steers. Each steer received supplementary ßC (at concentrations of 0, 600, 1200, or 1800 mg/day) for 90 days and then received no supplementary ßC for 60 days. ßC significantly increased in blood serum, liver, and subcutaneous and omental fat; linearly increased in the intestine and muscle; and remained unchanged in perirenal fat during supplementation. Differences between treatment groups were eliminated in subcutaneous and omental fat and in the liver by days 120 and 150, respectively, but remained significant at day 150 in blood. Retinol increased significantly in the liver and intestine during supplementation. Intramuscular fat content, meat color, and retinol in blood, muscle, or adipose tissues were not affected. Backfat thickness decreased slightly with increasing ßC supplementation and significantly differed between groups during depletion.


Asunto(s)
Alimentación Animal/análisis , Carne/normas , Vitamina A/química , beta Caroteno/administración & dosificación , Fenómenos Fisiológicos Nutricionales de los Animales , Animales , Bovinos , Dieta/veterinaria , Suplementos Dietéticos , Masculino , Vitamina A/metabolismo
17.
BMC Complement Altern Med ; 15: 198, 2015 Jun 25.
Artículo en Inglés | MEDLINE | ID: mdl-26108210

RESUMEN

BACKGROUND: The goal of this study is to determine if Rhodiola Crenulata (RC) has protective effects on mice hearts with severe sleep apnea model. METHODS: Sixty-four C57BL/6 J mice 5-6 months old were distributed into 4 groups i.e. Control group (21% O2, 24 h per day, 8 weeks, n=16); Hypoxia group (Hypoxia: 7% O2 60 s, 20% O2 alternating 60 s, 8 h per day, 8 weeks, n=16); Hypoxia+90RC and Hypoxia+270RC group (Hypoxia for 1st 4 weeks and hypoxia pretreated 90 mg/Kg and 270 mg/Kg Rhodiola Crenulata by oral gavage per day for 2nd 4 weeks, each n=16). Excised hearts from 4 groups of mice were analyzed for heart weight index changes using H&E staining, TUNEL-positive assays and Western Blotting protein. RESULTS: Cardiac widely dispersed TUNEL-positive apoptotic cells in mice hearts were less in Hypoxia+RC90 and Hypoxia+RC270 than those in Hypoxia. Compared with Hypoxia, the protein levels of Fas ligand, Fas death receptors, Fas-Associated Death Domain (FADD), activated caspase 8, and activated caspase 3 (Fas dependent apoptotic pathways) were decreased in Hypoxia+RC90, Hypoxia+RC270. The protein levels of Bad, Bax, t-Bid, activated caspase 9, activated caspase 3 (mitochondria dependent apoptotic pathway) were less in Hypoxia+RC90, Hypoxia+RC270 than those in hypoxia. The protein levels of Bcl2, Bcl-xL, p-Bad (Bcl2-realted anti-apoptotic pathway) and VEGF, p-PI3k, p-AKT (VEGF-related pro-survival pathway) were higher in Hypoxia+RC90, Hypoxia+RC270 than those in hypoxia. CONCLUSIONS: Our findings suggest that Rhodiola Crenulata have protective effects on chronic intermittent hypoxia-induced cardiac widely dispersed apoptosis via Fas-dependent and mitochondria-dependent apoptotic and VEGF-related pro-survival pathway.


Asunto(s)
Apoptosis/efectos de los fármacos , Cardiopatías/patología , Corazón/efectos de los fármacos , Miocardio , Fitoterapia , Rhodiola , Síndromes de la Apnea del Sueño/patología , Animales , Caspasas/metabolismo , Proteína Ligando Fas/metabolismo , Proteína de Dominio de Muerte Asociada a Fas/metabolismo , Cardiopatías/etiología , Cardiopatías/metabolismo , Cardiopatías/prevención & control , Hipoxia , Ratones , Ratones Endogámicos C57BL , Mitocondrias/metabolismo , Miocardio/metabolismo , Miocardio/patología , Fosfatidilinositol 3-Quinasas/metabolismo , Extractos Vegetales/farmacología , Extractos Vegetales/uso terapéutico , Síndromes de la Apnea del Sueño/complicaciones , Síndromes de la Apnea del Sueño/metabolismo , Factor A de Crecimiento Endotelial Vascular/metabolismo , Receptor fas/metabolismo
18.
Sci Rep ; 5: 9801, 2015 May 13.
Artículo en Inglés | MEDLINE | ID: mdl-25966798

RESUMEN

Anaerobic degradation of alkanes in hydrocarbon-rich environments has been documented and different degradation strategies proposed, of which the most encountered one is fumarate addition mechanism, generating alkylsuccinates as specific biomarkers. However, little is known about the mechanisms of anaerobic degradation of alkanes in oil reservoirs, due to low concentrations of signature metabolites and lack of mass spectral characteristics to allow identification. In this work, we used a multidisciplinary approach combining metabolite profiling and selective gene assays to establish the biodegradation mechanism of alkanes in oil reservoirs. A total of twelve production fluids from three different oil reservoirs were collected and treated with alkali; organic acids were extracted, derivatized with ethanol to form ethyl esters and determined using GC-MS analysis. Collectively, signature metabolite alkylsuccinates of parent compounds from C1 to C8 together with their (putative) downstream metabolites were detected from these samples. Additionally, metabolites indicative of the anaerobic degradation of mono- and poly-aromatic hydrocarbons (2-benzylsuccinate, naphthoate, 5,6,7,8-tetrahydro-naphthoate) were also observed. The detection of alkylsuccinates and genes encoding for alkylsuccinate synthase shows that anaerobic degradation of alkanes via fumarate addition occurs in oil reservoirs. This work provides strong evidence on the in situ anaerobic biodegradation mechanisms of hydrocarbons by fumarate addition.


Asunto(s)
Alcanos/metabolismo , Bacterias Anaerobias/metabolismo , Petróleo/microbiología , Bacterias Anaerobias/genética , Secuencia de Bases , Biodegradación Ambiental , ADN Bacteriano/genética , Datos de Secuencia Molecular
19.
Environ Technol ; 34(17-20): 2773-9, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24527641

RESUMEN

The objective of this study was to enhance removal of chemical oxygen demand (COD), total nitrogen (TN) and total phosphorus (TP) from domestic sewage in a sequencing batch reactor with added new materials. A modified anoxic/anaerobic/oxic (MAAO) process, integrating a micro-electrolysis (ME) bed in an anoxic tank, and complex biological media (CBM) in anoxic, anaerobic and oxic tanks to treat domestic sewage, and their performances were investigated. The MAAO system was operated at controlled hydraulic retention time (HRT) of 8 h and mixed liquor recirculation (MLR) at 75%. The results showed that the MAAO system could effectively remove COD, TN and TP with average rates of 93%, 80% and 94%, respectively, in March, and 94%, 76% and 91%, respectively, in August. In this system, TP was primarily removed from the anoxic tank regardless of the operational conditions; removal contribution ratios to TP of the anoxic tank reached 56% both in March and August, indicating that the ME bed can effectively enhance phosphorus removal. TN was primarily removed from the anoxic and anaerobic tanks; removal contribution ratios to TN of anoxic and anaerobic tanks reached 36-38% and 37-38%, respectively. The oxic tank had the highest share of COD removal (56% both in March and August) in the removal of phosphorus. The outflow concentrations of COD, TN and TP were 3-46, 7-14 and 0.3-0.5 mg/L, respectively, in March, and 26-49, 9-15 and 0.04-0.1 mg/L, respectively, in August. COD and TN removal performances indicated that the innovative materials of the ME bed and CBM can effectively enhance COD and TN removal.


Asunto(s)
Técnicas Electroquímicas/instrumentación , Nitrógeno/aislamiento & purificación , Fósforo/aislamiento & purificación , Aguas del Alcantarillado/análisis , Eliminación de Residuos Líquidos/instrumentación , Contaminantes Químicos del Agua/aislamiento & purificación , Anaerobiosis , Análisis de la Demanda Biológica de Oxígeno , Aguas del Alcantarillado/microbiología
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