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1.
Genome Biol Evol ; 15(9)2023 09 04.
Artículo en Inglés | MEDLINE | ID: mdl-37494061

RESUMEN

Cephonodes hylas, the coffee bee hawk moth is a hawk moth species with unique characteristics, such as larvae feeding on gardenia, overcoming the toxicity of its iridoid glycosides, diurnal adults, and transparent wings. Although C. hylas is a fascinating model for molecular biological research, genome sequence analysis-based genetic approaches to elucidate these peculiarities have not yet been undertaken. We successfully achieved de novo genome assembly at the chromosome level of C. hylas comparable to the Lepidoptera model organism, silkworm. Additionally, 16,854 protein-coding genes were annotated, and the constructed genome sequence and annotated genes were of the highest quality BUSCO completion compared to closely related species. Comparative genome analysis revealed the process of chromosomal evolution from the Bombycoidea ancestral (n = 31) genome and changes in turnover at the chromosome level associated with chromosomal fusion events, such as the rate of repetitive sequence insertion. These analyses were only possible because the genome was constructed at the chromosome level. Additionally, increased the nonsynonymous/synonymous rate (dN/dS) ratios were observed in multiple photoreceptor-related genes that were strongly associated with the acquisition of diurnal activity. Furthermore, tandemly duplicated expanded genes containing many digestive and other enzymes and larval midgut-specific expression were also confirmed. These genes may be involved in the metabolism of genipin, a toxin found in gardenias. Using the genome sequence of C. hylas determined at the chromosome level, we have successfully identified new insights into the chromosomal evolution of Bombycoidea, as well as the relationship between the genome sequence and its characteristic traits.


Asunto(s)
Halcones , Mariposas Nocturnas , Abejas/genética , Animales , Café , Halcones/genética , Cromosomas , Mariposas Nocturnas/genética , Fenotipo , Evolución Molecular
2.
DNA Res ; 29(5)2022 Aug 23.
Artículo en Inglés | MEDLINE | ID: mdl-36007888

RESUMEN

Onions are one of the most widely cultivated vegetables worldwide; however, the development and utilization of molecular markers have been limited because of the large genome of this plant. We present a genome-wide marker design workflow for onions and its application in a high-throughput genotyping method based on target amplicon sequencing. The efficiency of the method was evaluated by genotyping of F2 populations. In the marker design workflow, unigene and genomic sequence data sets were constructed, and polymorphisms between parental lines were detected through transcriptome sequence analysis. The positions of polymorphisms detected in the unigenes were mapped onto the genome sequence, and primer sets were designed. In total, 480 markers covering the whole genome were selected. By genotyping an F2 population, 329 polymorphic sites were obtained from the estimated positions or the flanking sequences. However, missing or sparse marker regions were observed in the resulting genetic linkage map. We modified the markers to cover these regions by genotyping the other F2 populations. The grouping and order of markers on the linkages were similar across the genetic maps. Our marker design workflow and target amplicon sequencing are useful for genome-wide genotyping of onions owing to their reliability, cost effectiveness, and flexibility.


Asunto(s)
Genoma de Planta , Cebollas , Mapeo Cromosómico/métodos , Ligamiento Genético , Genotipo , Técnicas de Genotipaje/métodos , Cebollas/genética , Polimorfismo de Nucleótido Simple , Reproducibilidad de los Resultados , Análisis de Secuencia , Flujo de Trabajo
3.
Nutrients ; 14(5)2022 Feb 24.
Artículo en Inglés | MEDLINE | ID: mdl-35267944

RESUMEN

With the accumulation of knowledge on the relation between psychological stress and gut microbiota, there is growing interest in controlling stress and/or mood disorders via probiotic supplementation. We aimed to examine the effect of probiotic Bifidobacterium bifidum TMC3115 (TMC3115) supplementation using a sub-chronic and mild social defeat stress murine model in this study. TM3115 supplementation maintained body weight gain and alleviated a polydipsia-like symptom induced by the stress. In the analyses of fecal and cecal bacterial profiles, expansions of Proteobacteria in stressed mice and increases in Actinobacteria and Bifidobacterium in mice supplemented with TMC3115 were observed. There was no marked difference in the diversity of cecal bacteria between the tested mice. Elevated serum levels of inflammatory markers such as tumor necrosis factor (TNF)-α and interleukin (IL)-6 were observed in the stressed mice, while TMC3115 only reduced the IL-6 level. These findings suggest that TMC3115 supplementation confers tolerance to psychosocial stress in the host through modulation of the gut microbiota and alleviation of stress-induced inflammatory responses. Furthermore, it may be expected to exert prevention and treatment of disorders related to peripheral IL-6, including depression.


Asunto(s)
Bifidobacterium bifidum , Probióticos , Animales , Bifidobacterium bifidum/fisiología , Suplementos Dietéticos , Ratones , Probióticos/farmacología , Derrota Social , Estrés Psicológico
4.
DNA Res ; 28(1)2021 Jan 19.
Artículo en Inglés | MEDLINE | ID: mdl-33475141

RESUMEN

The ancestral tomato species are known to possess genes that are valuable for improving traits in breeding. Here, we aimed to construct high-quality de novo genome assemblies of Solanum pimpinellifolium 'LA1670' and S. lycopersicum var. cerasiforme 'LA1673', originating from Peru. The Pacific Biosciences (PacBio) long-read sequences with 110× and 104× coverages were assembled and polished to generate 244 and 202 contigs spanning 808.8 Mbp for 'LA1670' and 804.5 Mbp for 'LA1673', respectively. After chromosome-level scaffolding with reference guiding, 14 scaffold sequences corresponding to 12 tomato chromosomes and 2 unassigned sequences were constructed. High-quality genome assemblies were confirmed using the Benchmarking Universal Single-Copy Orthologs and long terminal repeat assembly index. The protein-coding sequences were then predicted, and their transcriptomes were confirmed. The de novo assembled genomes of S. pimpinellifolium and S. lycopersicum var. cerasiforme were predicted to have 71,945 and 75,230 protein-coding genes, including 29,629 and 29,185 non-redundant genes, respectively, as supported by the transcriptome analysis results. The chromosome-level genome assemblies coupled with transcriptome data sets of the two accessions would be valuable for gaining insights into tomato domestication and understanding genome-scale breeding.


Asunto(s)
Genoma de Planta , Análisis de Secuencia de ADN , Solanum/genética , Transcriptoma , Genes de Plantas , Genómica , Secuenciación de Nucleótidos de Alto Rendimiento , Solanum lycopersicum/genética , Análisis de Secuencia de ARN
5.
Nat Commun ; 12(1): 405, 2021 01 15.
Artículo en Inglés | MEDLINE | ID: mdl-33452249

RESUMEN

Plant genomes remain highly fragmented and are often characterized by hundreds to thousands of assembly gaps. Here, we report chromosome-level reference and phased genome assembly of Ophiorrhiza pumila, a camptothecin-producing medicinal plant, through an ordered multi-scaffolding and experimental validation approach. With 21 assembly gaps and a contig N50 of 18.49 Mb, Ophiorrhiza genome is one of the most complete plant genomes assembled to date. We also report 273 nitrogen-containing metabolites, including diverse monoterpene indole alkaloids (MIAs). A comparative genomics approach identifies strictosidine biogenesis as the origin of MIA evolution. The emergence of strictosidine biosynthesis-catalyzing enzymes precede downstream enzymes' evolution post γ whole-genome triplication, which occurred approximately 110 Mya in O. pumila, and before the whole-genome duplication in Camptotheca acuminata identified here. Combining comparative genome analysis, multi-omics analysis, and metabolic gene-cluster analysis, we propose a working model for MIA evolution, and a pangenome for MIA biosynthesis, which will help in establishing a sustainable supply of camptothecin.


Asunto(s)
Camptotecina/biosíntesis , Evolución Molecular , Genoma de Planta/genética , Proteínas de Plantas/genética , Rubiaceae/metabolismo , Vías Biosintéticas/genética , Cromosomas de las Plantas/genética , Mapeo Contig , Genómica , Proteínas de Plantas/metabolismo , Raíces de Plantas/metabolismo , Plantas Medicinales/genética , Plantas Medicinales/metabolismo , Rubiaceae/genética , Alcaloides de la Vinca/biosíntesis
6.
Anim Sci J ; 91(1): e13478, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-33140549

RESUMEN

Prevention of stress-induced adverse effects is important for animals and humans to maintain their quality of life (QOL). Stress decreases the productivity of farm animals and induces abnormal behaviors, which is one of the major problems in animal welfare. In humans, stress increases the risk of mental illness which adversely impacts QOL. Stress is, thus, a common health problem for both animals and humans, and stress prevention and promotion of stress resilience could improve animal and human health and QOL. Among various stresses, psychosocial stress experienced by individuals is particularly difficult to prevent and it could, thus, prove beneficial to attempt to increase resilience to psychosocial stress. There exist a few critical interventions for promoting such resilience, environmental enrichment being one. However, this review describes recent progress in nutritional interventions that could confer resilience to psychosocial stress. The efficacy of this intervention is studied in the social defeat model mouse, which is a standard model for studying psychosocial stress. Several nutrients were found to rescue stress vulnerability using the models. Furthermore, probiotics and prebiotics became crucial dietary interventions for combating psychosocial stress. Collectively, dietary intake of appropriate nutrients will be more important for maintaining QOL in animals and humans.


Asunto(s)
Nutrientes/administración & dosificación , Terapia Nutricional , Fenómenos Fisiológicos de la Nutrición/fisiología , Fitoquímicos/administración & dosificación , Prebióticos/administración & dosificación , Probióticos/administración & dosificación , Estrés Psicológico/dietoterapia , Estrés Psicológico/prevención & control , Aminoácidos/administración & dosificación , Fenómenos Fisiológicos Nutricionales de los Animales , Animales , Modelos Animales de Enfermedad , Microbioma Gastrointestinal , Ratones , Péptidos/administración & dosificación , Calidad de Vida , Ratas , Estrés Psicológico/inmunología , Estrés Psicológico/microbiología
7.
Microbiologyopen ; 9(10): e1111, 2020 10.
Artículo en Inglés | MEDLINE | ID: mdl-32856395

RESUMEN

A large variety of microbes are present in the human gut, some of which are considered to interact with each other. Most of these interactions involve bacterial metabolites. Phascolarctobacterium faecium hardly uses carbohydrates for growth and instead uses succinate as a substrate. This study investigated the growth behavior of the co-culture of the succinate-specific utilizer P. faecium and the succinogenic gut commensal Bacteroides thetaiotaomicron. Succinate production by B. thetaiotaomicron supported the growth of P. faecium and concomitant propionate production via the succinate pathway. The succinate produced was completely converted to propionate. This result was comparable with the monoculture of P. faecium in the medium supplemented with 1% (w/v) succinate. We analyzed the transcriptional response (RNA-Seq) between the mono- and co-culture of P. faecium and B. thetaiotaomicron. Comparison of the expression levels of genes of P. faecium between the mono- and co-cultured conditions highlighted that the genes putatively involved in the transportation of succinate were notably expressed under the co-cultured conditions. Differential expression analysis showed that the presence of P. faecium induced changes in the B. thetaiotaomicron transcriptional pattern, for example, expression changes in the genes for vitamin B12 transporters and reduced expression of glutamate-dependent acid resistance system-related genes. Also, transcriptome analysis of P. faecium suggested that glutamate and succinate might be used as sources of succinyl-CoA, an intermediate in the succinate pathway. This study revealed some survival strategies of asaccharolytic bacteria, such as Phascolarctobacterium spp., in the human gut.


Asunto(s)
Bacteroides thetaiotaomicron/fisiología , Ácido Succínico/metabolismo , Veillonellaceae/fisiología , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Bacteroides thetaiotaomicron/genética , Bacteroides thetaiotaomicron/crecimiento & desarrollo , Microbioma Gastrointestinal , Interacciones Microbianas , Veillonellaceae/genética , Veillonellaceae/crecimiento & desarrollo
8.
Proc Natl Acad Sci U S A ; 117(25): 14543-14551, 2020 06 23.
Artículo en Inglés | MEDLINE | ID: mdl-32461376

RESUMEN

The genetic architecture of quantitative traits is determined by both Mendelian and polygenic factors, yet classic examples of plant domestication focused on selective sweep of newly mutated Mendelian genes. Here we report the chromosome-level genome assembly and the genomic investigation of a nonclassic domestication example, bitter gourd (Momordica charantia), an important Asian vegetable and medicinal plant of the family Cucurbitaceae. Population resequencing revealed the divergence between wild and South Asian cultivars about 6,000 y ago, followed by the separation of the Southeast Asian cultivars about 800 y ago, with the latter exhibiting more extreme trait divergence from wild progenitors and stronger signs of selection on fruit traits. Unlike some crops where the largest phenotypic changes and traces of selection happened between wild and cultivar groups, in bitter gourd large differences exist between two regional cultivar groups, likely reflecting the distinct consumer preferences in different countries. Despite breeding efforts toward increasing female flower proportion, a gynoecy locus exhibits complex patterns of balanced polymorphism among haplogroups, with potential signs of selective sweep within haplogroups likely reflecting artificial selection and introgression from cultivars back to wild accessions. Our study highlights the importance to investigate such nonclassic example of domestication showing signs of balancing selection and polygenic trait architecture in addition to classic selective sweep in Mendelian factors.


Asunto(s)
Domesticación , Genoma de Planta , Momordica charantia/genética , Selección Genética , Especiación Genética , Herencia Multifactorial , Filogenia , Polimorfismo de Nucleótido Simple , Sitios de Carácter Cuantitativo
9.
Biomed Res ; 41(2): 101-111, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-32307337

RESUMEN

The intestinal ecosystem is involved in the pathogenesis of mood disorders such as depression. Intestinal microbes can affect the central nervous system through the gut-brain axis, which raises the possibility of using probiotics for preventing depression. In this study, we examined the effect of heat-inactivated Lactobacillus gasseri CP2305 (CP2305) in a subchronic and mild social defeat stress (sCSDS) mouse model. sCSDS suppressed food intake. However, dietary CP2305 intake rescued it, suggesting that CP2305 improved the decreased appetite in sCSDS mice. sCSDS did not alter the gene expression of brain-derived neurotrophic factor, nerve growth factor, and neurotrophin-3 in the hippocampus. However, dietary CP2305 provided following sCSDS increased the gene expression of these neurotrophins in the hippocampus. These findings suggest that CP2305 supplementation would aid in preventing psychosocial stress-induced disorders.


Asunto(s)
Conducta Animal , Ingestión de Alimentos , Regulación de la Expresión Génica , Hipocampo/metabolismo , Calor , Lactobacillus gasseri , Estrés Psicológico , Animales , Modelos Animales de Enfermedad , Hipocampo/fisiología , Masculino , Ratones , Ratones Endogámicos ICR , Estrés Psicológico/metabolismo , Estrés Psicológico/patología , Estrés Psicológico/prevención & control
10.
Sci Rep ; 10(1): 4915, 2020 03 18.
Artículo en Inglés | MEDLINE | ID: mdl-32188916

RESUMEN

Taurine that conjugates with bile acid (BA) and mitochondrial-tRNA (mt-tRNA) is a conditional essential amino acid in humans, similarly to cats. To better understand the influence of acquired depletion of taurine on BA metabolism, the profiling of BAs and its intermediates, BA metabolism-enzyme expression, and taurine modified mt-tRNAs were evaluated in the taurine deficient diet-supplemented cats. In the taurine depleted cats, taurine-conjugated bile acids in bile and taurine-modified mt-tRNA in liver were significantly decreased, whereas unconjugated BA in serum was markedly increased. Impaired bile acid metabolism in the liver was induced accompanied with the decreases of mitochondrial cholesterol 27-hydroxylase expression and mitochondrial activity. Consequently, total bile acid concentration in bile was significantly decreased by the low activity of mitochondrial bile acid synthesis. These results implied that the insufficient dietary taurine intake causes impaired bile acid metabolism, and in turn, a risk for the various diseases similar to the mitochondrial diseases would be enhanced.


Asunto(s)
Ácidos y Sales Biliares/metabolismo , Mitocondrias/genética , Mitocondrias/metabolismo , ARN de Transferencia/metabolismo , Taurina/metabolismo , Animales , Biomarcadores , Gatos , Colesterol/sangre , Colesterol/metabolismo , Expresión Génica , Metabolismo de los Lípidos , Hígado/metabolismo , Modelos Biológicos , Especificidad de Órganos , Oxiesteroles/sangre , Oxiesteroles/metabolismo , ARN de Transferencia/genética , Taurina/sangre
11.
Biosci Biotechnol Biochem ; 84(6): 1098-1104, 2020 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-32019425

RESUMEN

In this study, we investigated the effects of dietary supplementation of Citrus tumida hort. ex Tanaka on food intake, body and fat tissue weights, and metabolic profiles of plasma and liver in mice. Supplementation with 5% (w/w) of peels of immature C. tumida (PIC) for 4 weeks significantly suppressed body weight gain and decreased adipose tissue weight in epididymal, perirenal, and subcutaneous fats. Metabolome analyses showed that 2-hydroxyvaleric acid levels were reduced in the blood plasma of mice fed with PIC. PIC supplementation significantly elevated dipeptide (Thr-Asp, Ser-Glu, and Ala-Ala), glucuronic acid, and S-methylglutathione levels, and significantly reduced betaine aldehyde levels in the liver. In conclusion, PIC supplementation affects the metabolism of fatty acids, pectin, glutathione, and choline, showing potential beneficial effects for metabolic syndrome and obesity. PIC may be developed as a functional food and used in the treatment of these diseases.


Asunto(s)
Citrus , Suplementos Dietéticos , Ingestión de Alimentos/fisiología , Frutas , Hígado/metabolismo , Metaboloma , Plasma/metabolismo , Tejido Adiposo , Animales , Betaína/análogos & derivados , Betaína/análisis , Betaína/metabolismo , Ácido Glucurónico/metabolismo , Metabolismo de los Lípidos , Masculino , Síndrome Metabólico/dietoterapia , Metabolómica/métodos , Ratones , Ratones Endogámicos C57BL , Obesidad/dietoterapia , Aumento de Peso
12.
J Nutr Sci Vitaminol (Tokyo) ; 65(1): 19-23, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-30814407

RESUMEN

Citrus fruits have several potential benefits for maintaining our health. In this study, we investigated the anti-obesity effects of immature Citrus tumida hort. ex Tanaka (C. tumida) peels using an acute obesity mice model. C57BL/6J male mice were divided into 2 groups; HFD-LL subjected to a high fat diet (HFD) and constant light exposure (LL), and HFDC-LL subjected to a HFD containing immature peel powder of C. tumida (5% w/w) and LL. Dietary ingestion of immature C. tumida peels significantly suppressed body weight gain following decreased epidydimal, perirenal, and subcutaneous fat weights. Blood levels of triglyceride and total cholesterol in the HFDC-LL were significantly lower than those in the HFD-LL group; however, there was no significant difference in food or calorie intake between the 2 groups. These results suggested that immature C. tumida peels have a beneficial effect on the prevention of obesity and metabolic syndrome via its biochemical activities of lipid metabolism.


Asunto(s)
Fármacos Antiobesidad/farmacología , Citrus , Dieta/métodos , Obesidad/dietoterapia , Extractos Vegetales/farmacología , Enfermedad Aguda , Adiposidad/efectos de los fármacos , Animales , Colesterol/sangre , Dieta Alta en Grasa/efectos adversos , Modelos Animales de Enfermedad , Masculino , Ratones , Ratones Endogámicos C57BL , Obesidad/sangre , Obesidad/etiología , Triglicéridos/sangre , Aumento de Peso/efectos de los fármacos
13.
Mol Genet Genomics ; 293(2): 557-568, 2018 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-29222702

RESUMEN

Spinach (Spinacia oleracea L.) is a dioecious plant with male heterogametic sex determination and homomorphic sex chromosomes (XY). The dioecism is utilized for producing commercial hybrid seeds, and hence understanding the molecular-genetic basis of the species' sex determining locus is an important issue for spinach breeding. In this study, seven dominant DNA markers were shown to completely co-segregate with the male-determining gene in segregating spinach populations comprising > 1500 plants. In addition, these seven dominant DNA markers were completely associated with the male-determining gene in over 100 spinach germplasm accessions and cultivars. These observations suggest that, in spinach, a Y-chromosomal region around the male-determining locus does not (or almost not) recombine with a counterpart region on the X chromosome. Using five of the seven DNA markers, five bacterial artificial chromosome (BAC) clone contigs with a total length of approximately 690 kbp were constructed. Full sequencing of six representative BAC clones (total insert length 504 kbp) from the five contigs and a transcriptome analysis by RNA-seq revealed that the Y-chromosomal region around the male-determining locus contains large amounts of repetitive elements, suggesting that the region might be poor in gene content. Most of the repeats found in this region are novel Ty1-copia-like and its derivative elements that accumulate predominantly in heterochromatic regions. Our findings may provide valuable insight into spinach genome structure and clues for future research into the evolution of the sex determining locus.


Asunto(s)
Mapeo Cromosómico/métodos , Cromosomas de las Plantas/genética , Genoma de Planta/genética , Spinacia oleracea/genética , Secuencia de Bases , Cromosomas Artificiales Bacterianos/genética , Flores/genética , Genes de Plantas/genética , Marcadores Genéticos/genética , Óvulo Vegetal/genética , Polen/genética , Secuencias Repetitivas de Ácidos Nucleicos
14.
Stress ; 19(2): 192-7, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-26864137

RESUMEN

Social stress may precipitate psychiatric disorders such as depression, which is related to the occurrence of the metabolic syndrome, including obesity and type 2 diabetes. We have evaluated the effects of social stress on central and peripheral metabolism using a model of depression in mice. In the present study, we focused on coenzyme A (CoA) molecular species [i.e. non-esterified CoA (CoASH), acetyl-CoA and malonyl-CoA] which play important roles in numerous metabolic pathways, and we analyzed changes in expression of these molecules in the hypothalamus and liver of adult male mice (C57BL/6J) subjected to 10 days of subchronic mild social defeat stress (sCSDS) with ICR mice as aggressors. Mice (n = 12) exposed to showed hyperphagia- and polydipsia-like symptoms and increased body weight gain compared with control mice which were not affected by exposure to ICR mice (n = 12). To elucidate the underlying metabolic features in the sCSDS model, acetyl-CoA, malonyl-CoA and CoASH tissue levels were analyzed using the acyl-CoA cycling method. The levels of hypothalamic malonyl-CoA, which decreases feeding behavior, were not influenced by sCSDS. However, sCSDS reduced levels of acetyl-CoA, malonyl-CoA and total CoA (sum of the three CoA molecular species) in the liver. Hence, hyperphagia-like symptoms in sCSDS mice evidently occurred independently of hypothalamic malonyl-CoA, but might consequently lead to down-regulation of hepatic CoA via altered expression of nudix hydrolase 7. Future studies should investigate the molecular mechanism(s) underlying the down-regulation of liver CoA pools in sCSDS mice.


Asunto(s)
Acetilcoenzima A/metabolismo , Coenzima A/metabolismo , Depresión/metabolismo , Hígado/metabolismo , Malonil Coenzima A/metabolismo , Estrés Psicológico/metabolismo , Animales , Peso Corporal/fisiología , Modelos Animales de Enfermedad , Regulación hacia Abajo , Hipotálamo/metabolismo , Masculino , Ratones , Ratones Endogámicos C57BL , Ratones Endogámicos ICR , Aumento de Peso/fisiología
15.
Plant Cell Physiol ; 56(5): 852-62, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25619824

RESUMEN

Boron (B) is an essential micronutrient for plants but is toxic when accumulated in excess. The plant BOR family encodes plasma membrane-localized borate exporters (BORs) that control translocation and homeostasis of B under a wide range of conditions. In this study, we examined the evolutionary divergence of BORs among terrestrial plants and showed that the lycophyte Selaginella moellendorffii and angiosperms have evolved two types of BOR (clades I and II). Clade I includes AtBOR1 and homologs previously shown to be involved in efficient transport of B under conditions of limited B availability. AtBOR1 shows polar localization in the plasma membrane and high-B-induced vacuolar sorting, important features for efficient B transport under low-B conditions, and rapid down-regulation to avoid B toxicity. Clade II includes AtBOR4 and barley Bot1 involved in B exclusion for high-B tolerance. We showed, using yeast complementation and B transport assays, that three genes in S. moellendorffii, SmBOR1 in clade I and SmBOR3 and SmBOR4 in clade II, encode functional BORs. Furthermore, amino acid sequence alignments identified an acidic di-leucine motif unique in clade I BORs. Mutational analysis of AtBOR1 revealed that the acidic di-leucine motif is required for the polarity and high-B-induced vacuolar sorting of AtBOR1. Our data clearly indicated that the common ancestor of vascular plants had already acquired two types of BOR for low- and high-B tolerance, and that the BOR family evolved to establish B tolerance in each lineage by adapting to their environments.


Asunto(s)
Aminoácidos/metabolismo , Antiportadores/metabolismo , Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Boratos/metabolismo , Boro/metabolismo , Polaridad Celular , Evolución Molecular , Vacuolas/metabolismo , Secuencias de Aminoácidos , Secuencia de Aminoácidos , Arabidopsis/efectos de los fármacos , Transporte Biológico , Bryopsida/metabolismo , Clonación Molecular , Secuencia Conservada , ADN Complementario/genética , Datos de Secuencia Molecular , Mutación/genética , Filogenia , Selaginellaceae/metabolismo , Alineación de Secuencia
16.
Anim Sci J ; 86(2): 181-8, 2015 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-25040023

RESUMEN

Depression induces anorexia, leading to suppressed feeding behaviors and energy intake. Previously, we revealed that chronic social defeat induced a mild suppression of feeding in rats with elevated levels of hypothalamic malonyl-CoA which regulates feeding. Therefore, we attempted to elucidate the effects of chronic mild food restriction on behavior and on hypothalamic malonyl-CoA. The chronic mild food restricted rats were fed a restricted diet approximately 80% to 90% amount of diet compared to the control for 5 weeks. Ratios of restriction were adjusted with feed consumption in the chronic social defeat stressed rats. Chronic mild food restricted rats exhibited a suppression of body weight gain similar to that of the chronic social defeat stressed rats. Also these rats showed increased time spent in the center area of an open field (OF), prolonged immobility time in forced swim, increased phosphorylation of hypothalamic adenosine monophosphate-activated protein kinase (AMPK) and acetyl-CoA carboxylase and a decreased concentration of hypothalamic malonyl-CoA. Weight of the adrenal glands, locomotion in an OF, mitogen-activated protein kinase cascade and calcium/calmodulin-dependent protein kinases II in the hippocampus were not affected by chronic mild food restriction. Our findings suggest that chronic mild food restriction activates AMPK following a decreased hypothalamic malonyl-CoA.


Asunto(s)
Conducta Animal/fisiología , Ingestión de Alimentos/fisiología , Privación de Alimentos/fisiología , Hipotálamo/metabolismo , Malonil Coenzima A/metabolismo , Transducción de Señal/fisiología , Proteínas Quinasas Activadas por AMP/metabolismo , Acetil-CoA Carboxilasa/metabolismo , Animales , Masculino , Malonil Coenzima A/fisiología , Fosforilación , Ratas Wistar , Estrés Psicológico/fisiopatología
17.
BMC Neurosci ; 15: 72, 2014 Jun 06.
Artículo en Inglés | MEDLINE | ID: mdl-24906408

RESUMEN

BACKGROUND: Suppression of body weight and symptom of anorexia are major symptoms of depression. Recently, we reported that chronic social defeat stress (CSDS) induced suppression of body weight gain and anorexic feeding behavior in rats. These abnormalities were the result of disrupted malonyl-coenzyme A (CoA) signaling pathway in the hypothalamus. However, the condition of peripheral leptin and its hypothalamic downstream signal molecules which regulate hypothalamic malonyl-CoA level in the CSDS-exposed rats (CSDS rats) is still unknown. RESULTS: CSDS rats showed suppressed body weight gain and food intake. The weight of the CSDS rats' epididymal white adipose tissues was decreased when compared to the control rats. The plasma cholesterol concentration was decreased significantly in the CSDS rats compared to the control rats (P < 0.05). The plasma glucose concentration was slightly decreased in the CSDS rats compared to the control rats (P < 0.1). The expression of leptin mRNA in epididymal white adipose tissues and the plasma leptin concentration were decreased in CSDS rats. Furthermore, the phosphorylation of the hypothalamic downstream signals of leptin, including extracellular signal-regulated kinase 1/2 (ERK1/2) and signal transducer and activator of transcription 3 (STAT3), was decreased in CSDS rats. CONCLUSIONS: Our results indicated that decreased peripheral leptin expression in CSDS rats could down-regulate the hypothalamic downstream signaling pathways of leptin while suppressed food intake. These data indicate that CSDS induces the down-regulation of hypothalamic AMPK following the elevation of hypothalamic malonyl-CoA levels and is independent of peripheral leptin and glucose.


Asunto(s)
Anorexia/fisiopatología , Depresión/fisiopatología , Hipotálamo/fisiopatología , Leptina/sangre , Predominio Social , Estrés Psicológico/fisiopatología , Adaptación Psicológica , Animales , Anorexia/complicaciones , Enfermedad Crónica , Depresión/complicaciones , Ingestión de Alimentos , Masculino , Ratas , Ratas Wistar , Estrés Psicológico/complicaciones , Aumento de Peso
18.
Adv Exp Med Biol ; 775: 29-43, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-23392922

RESUMEN

Taurine is one of the most abundant amino acids in the central nervous system, and it has various important functions as a neuromodulator and antioxidant. Taurine is expected to be involved in the mental disorders such as depression; however, knowledge of its function in relation to depression is limited. In this research, we tried to elucidate the effects of taurine supplementation on antidepressant-like behaviors in rats and depression-related signal transduction in the hippocampus. In behavioral tests, rats fed a high taurine (HT: 45 mmol/kg taurine) diet for 4 weeks (HT4w) showed decreased immobility in the forced swim test (FS) compared to controls. On the other hand, rats fed a low taurine (LT: 22.5 mmol/kg taurine) diet for 4 weeks or an HT diet for 2 weeks (HT2w) did not show a significant difference in FS compared to controls. In western blot analyses, the expression of glutamic acid decarboxylase (GAD) 65 and GAD67 in the hippocampus was not affected by taurine supplementation. However, the phosphorylation levels of extracellular signal-regulated kinase1/2 (ERK1/2), protein kinase B (Akt), glycogen synthase kinase3 beta (GSK3ß), and cAMP response element-binding protein (CREB) were increased in the hippocampus of HT4w and HT2w rats. Phosphorylated calcium/calmodulin-dependent protein kinase II (CaMKII) was increased in the hippocampus of HT4w rats only. Moreover, no significant changes in these molecules were observed in the hippocampus of rats fed an HT diet for 1 day. In conclusion, our discoveries suggest that taurine supplementation has an antidepressant-like effect and an ability to change depression-related signaling cascades in the hippocampus.


Asunto(s)
Antidepresivos/farmacología , Hipocampo/efectos de los fármacos , Hipocampo/metabolismo , Transducción de Señal/efectos de los fármacos , Taurina/administración & dosificación , Taurina/farmacología , Animales , Antidepresivos/administración & dosificación , Suplementos Dietéticos , Conducta Alimentaria/efectos de los fármacos , Masculino , Proteínas del Tejido Nervioso/metabolismo , Fosforilación/efectos de los fármacos , Ratas , Ratas Wistar , Aumento de Peso/efectos de los fármacos
19.
Biochem Biophys Res Commun ; 423(4): 781-4, 2012 Jul 13.
Artículo en Inglés | MEDLINE | ID: mdl-22713453

RESUMEN

Three coenzyme A (CoA) molecular species, i.e., acetyl-CoA, malonyl-CoA, and nonesterified CoA (CoASH), in 13 types of fasted rat tissue were analyzed. A relatively larger pool size of total CoA, consisting of acetyl-CoA, malonyl-CoA, and CoASH, was observed in the medulla oblongata, liver, heart, and brown adipose tissue. Focusing on changes in the CoA pool size in response to the nutrient composition of the diet given, total CoA pools in rats continuously fed a high-fat diet for 4 weeks were significantly higher in the hypothalamus, cerebellum, and kidney, and significantly lower in the liver and skeletal muscle than those of rats fed a high-carbohydrate or high-protein diet. In particular, reductions in the liver were remarkable and were caused by decreased CoASH levels. Consequently, the total CoA pool size was reduced by approximately one-fifth of the hepatic contents of rats fed the other diets. In the hypothalamus, which monitors energy balance, all three CoA molecular species measured were at higher levels when rats were fed the high-fat diet. Thus, it was of interest that feeding rats a high-fat diet affected the behaviors of CoA pools in the hypothalamus, liver, and skeletal muscle, suggesting a significant relationship between CoA pools, especially malonyl-CoA and/or CoASH pools, and lipid metabolism in vivo.


Asunto(s)
Acetilcoenzima A/metabolismo , Coenzima A/metabolismo , Dieta Alta en Grasa/efectos adversos , Malonil Coenzima A/metabolismo , Animales , Peso Corporal , Ingestión de Energía , Hipotálamo/enzimología , Metabolismo de los Lípidos , Hígado/enzimología , Masculino , Músculo Esquelético/enzimología , Obesidad/etiología , Especificidad de Órganos , Ratas , Ratas Wistar , Distribución Tisular , Aumento de Peso
20.
Biochem Biophys Res Commun ; 421(2): 301-4, 2012 May 04.
Artículo en Inglés | MEDLINE | ID: mdl-22503976

RESUMEN

Suppression of body weight and eating disorders, such as anorexia, are one of the major symptoms of psychiatric disorders such as depression. However, the mechanisms of weight loss and reduced appetite in depressive patients and in animal models of depression are largely unknown. In this study, we characterized the mechanism of anorexia resulting from depression using socially defeated rats as an animal model of depression. Socially defeated rats showed suppressed body weight gain, enlarged adrenal glands, decreased home cage activity, decreased food intake, and increased immobility in the forced swim test. These results are representative of some of the core symptoms of depression. Simultaneously, we observed decreased levels of phosphorylated AMP-activated protein kinase (AMPK) and acetyl-coenzyme A (CoA) carboxylase (ACC) and increased levels of malonyl-CoA in the hypothalamus of socially defeated rats. Hypothalamic malonyl-CoA controlled feeding behavior and elevation of malonyl-CoA in the hypothalamus induced inhibition of food intake. Our findings suggest that the suppression of body weight gain caused by social defeat stress is caused by anorexic feeding behavior via an increased concentration of malonyl-CoA in the hypothalamus.


Asunto(s)
Anorexia/enzimología , Anorexia/psicología , Conducta Apetitiva , Depresión/complicaciones , Hipotálamo/enzimología , Malonil Coenzima A/metabolismo , Animales , Peso Corporal , Masculino , Ratas , Ratas Wistar , Transducción de Señal , Estrés Psicológico/complicaciones
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