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1.
Carbohydr Polym ; 334: 122027, 2024 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-38553226

RESUMEN

To investigate the effect of oil additives on improving the water resistance of corn starch straws, corn oil (CO), soybean oil (SO), rapeseed oil (RO), peanut oil (PO), lard (LD) and coconut oil (CCO) were chosen and compared the structure and properties of starch straws with different oil additives. Corn starch straws (CS), and starch straws supplemented with CO, SO, RO, PO, LD and CCO were prepared by thermoplastic extrusion. The results showed that the incorporation of oils effectively enhanced the water resistance of starch straws such as water absorption, water solubility and water swelling performance. Meanwhile, the flexural strength of starch straws significantly increased. There was no significant linear relationship among starch chain length, oil unsaturation and straw performance. Among seven starch straws, S-SO had the strongest hydrogen bond interaction (3289 cm-1) and relaxation time (0.96 ms). The S-CO had the highest relative crystallinity (16.82 %) and degree of double helix (1.535), hence resulting in the lowest water absorption and solubility values, the highest flexural strength (23.43 MPa), the highest ΔT value (9.93 °C) and ΔH value (4.79 J/g). S-RO had the highest thermal transition temperatures.


Asunto(s)
Almidón , Zea mays , Almidón/química , Zea mays/química , Agua/química , Aceite de Soja , Fenómenos Químicos , Aceite de Brassica napus , Aceite de Maíz
2.
J Ethnopharmacol ; 322: 117554, 2024 Mar 25.
Artículo en Inglés | MEDLINE | ID: mdl-38092318

RESUMEN

ETHNOPHARMACOLOGICAL RELEVANCE: Rheumatoid arthritis (RA), a chronic auto-immune disease, will cause serious joint damage and disability. Glycyrrhizae Radix et Rhizoma (GRR) is commonly included in many anti-RA formulas used in the clinical practice in China. AIM OF THE STUDY: To elucidate the alleviation of GRR and its active compounds on RA and the possible engaged mechanism. MATERIALS AND METHODS: The clinical score, paw swelling degree and pain threshold were detected in the collagen-induced arthritis (CIA) in DBA/1 mice. The ankle joints of mice were observed by using X-Ray, hematoxylin-eosin (H&E), masson's trichrome (Masson), and safranin O and fast green (Safranin O) staining. The potential targets of GRR were predicted by network pharmacology and further verified by using enzyme-linked immunosorbent assay (ELISA) and western-blot. Real-time polymerase chain reaction (Real-time PCR) and wound healing assay were conducted in synovial MH7A cells. The interaction between active compounds and potential targets predicted by molecular docking was confirmed by using cellular thermal shift assay (CETSA). RESULTS: GRR (615 mg/kg) obviously alleviated CIA in mice. Network pharmacology implied that GRR might affect angiogenesis and inflammation, among which vascular endothelial growth factor-A (VEGF-A), tumor necrosis factor-α (TNFα), interleukin-1ß (IL-1ß), IL-6 and phosphorylated protein kinase B (AKT) might be the key targets involved in this process. GRR decreased AKT phosphorylation and reduced the elevated levels of TNFα, VEGF-A, IL-1ß and IL-6. Next, in vitro results demonstrated that glycyrrhetinic acid (GA) and isoliquiritigenin (ISL) were two active compounds that inhibited TNFα-induced synovial cell angiogenesis and inflammation. Moreover, GA and ISL actually improved RA in CIA mice. The results of molecular docking and CETSA displayed that ISL and GA might interact with TNF receptor-1 (TNFR1), toll-like receptor-4 (TLR4) and VEGF receptor-2 (VEGFR2), thereby contributing to their inhibition on angiogenesis and inflammation. CONCLUSION: GRR and two active compounds, including ISL and GA, alleviated RA via inhibiting angiogenesis and inflammation.


Asunto(s)
Artritis Experimental , Artritis Reumatoide , Medicamentos Herbarios Chinos , Glycyrrhiza , Ratones , Animales , Artritis Experimental/inducido químicamente , Artritis Experimental/tratamiento farmacológico , Factor A de Crecimiento Endotelial Vascular , Proteínas Proto-Oncogénicas c-akt , Factor de Necrosis Tumoral alfa , Interleucina-6 , Simulación del Acoplamiento Molecular , Ratones Endogámicos DBA , Artritis Reumatoide/patología , Inflamación
3.
Int J Biol Macromol ; 245: 125507, 2023 Aug 01.
Artículo en Inglés | MEDLINE | ID: mdl-37355072

RESUMEN

In this study, five polysaccharides were extracted from processed Cistanche deserticola. The processing included crude product, enzymatic hydrolysis, hot air drying, stir-baking with wine and high-pressure steaming, and these polysaccharides were named as CP-CDPs, EH-CDPs, HAD-CDPs, SBW-CDPs and HPS-CDPs, respectively. The structural characteristics and biological activities were explored. The results showed that processing changed properties of C. deserticola polysaccharides. CP-CDPs had the highest brightness value L*(93.84) and carbohydrate content (61.27 %). EH-CDPs had minimum Mw (1531.50 kDa), while SBW-CDPs had maximum Mw (2526.0 kDa). Glucose was major predominant monosaccharide in CP-CDPs (89.82 %), HAD-CDPs (79.3 %), SBW-CDPs (59.41 %) and HPS-CDPs (63.86 %), while galactose was major monosaccharide in EH-CDPs (29.44 %). According to SEM, SBW-CDPs showed compact structures, while HPS-CDPs and HAD-CDPs had similar looser structure than SBW-CDPs; meanwhile, CP-CDPs showed irregular agglomeration shape and EH-CDPs was dense blocky shape. The AFM showed SBW-CDPs had the largest molecular chain than other polysaccharides. When scavenging activity reaching 50 %, the concentrations of CP-CDPs, EH-CDPs, HAD-CDPs, SBW-CDPs, HPS-CDPs are 2.25, 0.25, 0.75, 1.8 and 1.5 mg/mL, respectively. This study sheds light on the effects of traditional Chinese medicine processing on characteristics, bioactivities of C. deserticola polysaccharides, and provides the basis for applications in food and pharmaceutical industries.


Asunto(s)
Antioxidantes , Cistanche , Antioxidantes/farmacología , Antioxidantes/química , Cistanche/química , Extractos Vegetales/química , Vapor , Polisacáridos/farmacología , Polisacáridos/química
4.
Front Plant Sci ; 14: 1140691, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37223798

RESUMEN

Introduction: Polygonatum kingianum is a traditional medicinal plant, and processing has significantly impacts its quality. Methods: Therefore, untargeted gas chromatography-mass spectrometry (GC-MS) and Fourier transform-near-infrared spectroscopy (FT-NIR) were used to analyze the 14 processing methods commonly used in the Chinese market.It is dedicated to analyzing the causes of major volatile metabolite changes and identifying signature volatile components for each processing method. Results: The untargeted GC-MS technique identified a total of 333 metabolites. The relative content accounted for sugars (43%), acids (20%), amino acids (18%), nucleotides (6%), and esters (3%). The multiple steaming and roasting samples contained more sugars, nucleotides, esters and flavonoids but fewer amino acids. The sugars are predominantly monosaccharides or small molecular sugars, mainly due to polysaccharides depolymerization. The heat treatment reduces the amino acid content significantly, and the multiple steaming and roasting methods are not conducive to accumulating amino acids. The multiple steaming and roasting samples showed significant differences, as seen from principal component analysis (PCA) and hierarchical cluster analysis (HCA) based on GC-MS and FT-NIR. The partial least squares discriminant analysis (PLS-DA) based on FT-NIR can achieve 96.43% identification rate for the processed samples. Discussion: This study can provide some references and options for consumers, producers, and researchers.

5.
Plant Physiol ; 192(2): 1099-1114, 2023 05 31.
Artículo en Inglés | MEDLINE | ID: mdl-36932694

RESUMEN

Soybean (Glycine max) is a major grain and oil crop worldwide, but low phosphorus (LP) in soil severely limits the development of soybean production. Dissecting the regulatory mechanism of the phosphorus (P) response is crucial for improving the P use efficiency of soybean. Here, we identified a transcription factor, GmERF1 (ethylene response factor 1), that is mainly expressed in soybean root and localized in the nucleus. Its expression is induced by LP stress and differs substantially in extreme genotypes. The genomic sequences of 559 soybean accessions suggested that the allelic variation of GmERF1 has undergone artificial selection, and its haplotype is significantly related to LP tolerance. GmERF1 knockout or RNA interference resulted in significant increases in root and P uptake efficiency traits, while the overexpression of GmERF1 produced an LP-sensitive phenotype and affected the expression of 6 LP stress-related genes. In addition, GmERF1 directly interacted with GmWRKY6 to inhibit transcription of GmPT5 (phosphate transporter 5), GmPT7, and GmPT8, which affects plant P uptake and use efficiency under LP stress. Taken together, our results show that GmERF1 can affect root development by regulating hormone levels, thus promoting P absorption in soybean, and provide a better understanding of the role of GmERF1 in soybean P signal transduction. The favorable haplotypes from wild soybean will be conducive to the molecular breeding of high P use efficiency in soybean.


Asunto(s)
Glycine max , Factores de Transcripción , Glycine max/metabolismo , Factores de Transcripción/genética , Factores de Transcripción/metabolismo , Fósforo/metabolismo , Genotipo , Fenotipo , Raíces de Plantas/genética , Raíces de Plantas/metabolismo
6.
Appl Biochem Biotechnol ; 195(3): 1968-1982, 2023 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-36401725

RESUMEN

Radix Pseudostellariae, a traditional Chinese medicine, functions in modulating human immunity and anti-tumor, but its pharmacological mechanism remained unclear. In this study, 8 active components and 91 targets of Radix Pseudostellariae were obtained from the Traditional Chinese Medicine Systems Pharmacology (TCMSP) database, and 225 genes related to gastric cancer (GC) were accessed from MalaCards. On the basis of these targets and GC-related genes, a protein-protein interaction (PPI) network was established. Random walk with restart (RWR) analysis was performed on the PPI network with the intersection of targets and GC-related genes as the seeds. The top 50 target genes with high affinity scores were obtained. The Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses showed that the enrichment of the top 50 genes was mostly presented in the cancer-related biological functions and signaling pathways, such as cellular response to oxidative stress, regulation of apoptotic signaling pathway, and P53 signaling pathway. A drug-component-target network was established, with the top 50 genes being used as key targets. Acacetin and luteolin were revealed to directly act on the core target TP53 in the network. Thus, SwissDock was used to simulate the molecular docking between TP53 protein and acacetin and luteolin. The results of docking simulation presented small estimated ΔG of two small molecules, which were suggested to be potential targets of TP53 protein. Subsequent cellular and molecular experiments confirmed this bioinformatics result. In conclusion, this study predicted the key anti-GC active components and corresponding targets of Radix Pseudostellariae through bioinformatics analysis. The findings underlie the anti-GC mechanism of Radix Pseudostellariae.


Asunto(s)
Medicamentos Herbarios Chinos , Neoplasias Gástricas , Humanos , Simulación del Acoplamiento Molecular , Neoplasias Gástricas/tratamiento farmacológico , Neoplasias Gástricas/genética , Farmacología en Red , Luteolina , Proteína p53 Supresora de Tumor , Medicamentos Herbarios Chinos/farmacología , Medicina Tradicional China
7.
Foods ; 11(22)2022 Nov 09.
Artículo en Inglés | MEDLINE | ID: mdl-36429160

RESUMEN

Medicinal plants have incredibly high economic value, and a practical evaluation of their quality is the key to promoting industry development. The deep learning model based on residual convolutional neural network (ResNet) has the advantage of automatic extraction and the recognition of Fourier transform near-infrared spectroscopy (FT-NIR) features. Models are difficult to understand and interpret because of unknown working mechanisms and decision-making processes. Therefore, in this study, artificial feature extraction methods combine traditional partial least squares discriminant analysis (PLS-DA) and support vector machine (SVM) models to understand and compare deep learning models. The results show that the ResNet model has significant advantages over traditional models in feature extraction and recognition. Secondly, preprocessing has a great impact on the feature extraction and feature extraction, and is beneficial for improving model performance. Competitive adaptive reweighted sampling (CARS) and variable importance in projection (VIP) methods screen out more feature variables after preprocessing, but the number of potential variables (LVs) and successive projections algorithm (SPA) methods obtained is fewer. The SPA method only extracts two variables after preprocessing, causing vital information to be lost. The VIP feature of traditional modelling yields the best results among the four methods. After spectral preprocessing, the recognition rates of the PLS-DA and SVM models are up to 90.16% and 88.52%. For the ResNet model, preprocessing is beneficial for extracting and identifying spectral image features. The ResNet model based on synchronous two-dimensional correlation spectra has a recognition accuracy of 100%. This research is beneficial to the application development of the ResNet model in foods, spices, and medicinal plants.

8.
Int Immunopharmacol ; 113(Pt A): 109373, 2022 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-36279665

RESUMEN

Microglia/macrophage polarization modulation plays a key role in the pathogenesis of multiple sclerosis (MS)/experimental autoimmune encephalomyelitis (EAE). M1 microglia/macrophages secrete a variety of cytokines that cause inflammation and facilitate demyelination in the central nervous system (CNS). Baicalein (5,6,7-trihydroxyflavone, C15H10O5, BAI), a natural flavonoid isolated from the roots of the traditional Chinese medicine Scutellaria baicalensis Georgi, has been suggested to have a wide range of biological effects, including antioxidant, anti-inflammatory, and neuroprotective properties. In this study, flow cytometry, Western blotting, immunofluorescence and other methods were used to investigate whether BAI could reduce the demyelination and inflammatory response of the spinal cord in EAE mice induced by MOG35-55 and affect the polarization of spinal microglia/macrophages. Our results showed that BAI treatment delayed the onset of EAE and alleviated clinical symptoms, demyelination and inflammatory cell infiltration. Meanwhile, BAI inhibited the overactivation of M1 microglia/macrophages in vivo and in vitro, significantly decreased the expression of proinflammatory cytokines in M1 microglia/macrophages, and inhibited the activation of STAT1. Subsequently, molecular docking, pull-down and immunofluorescence experiments confirmed that BAI has the ability to bind to the SH2 domain of STAT1 and that BAI colocalizes with p-STAT1 in the cytoplasm rather than being transferred to the nucleus during inflammatory stimulation. This study showed that BAI might inhibit the polarization of microglia/macrophages to the M1 phenotype in EAE mice by targeting STAT1. This new discovery lays a theoretical and experimental foundation for the clinical application of BAI in the treatment of MS.


Asunto(s)
Encefalomielitis Autoinmune Experimental , Esclerosis Múltiple , Ratones , Animales , Microglía , Simulación del Acoplamiento Molecular , Macrófagos , Fenotipo , Citocinas/metabolismo , Ratones Endogámicos C57BL , Factor de Transcripción STAT1/metabolismo
9.
Contrast Media Mol Imaging ; 2022: 6056829, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36134116

RESUMEN

In order to investigate the effects of different doses of Dahuang Zhechong pills on the ubiquitin proteasome pathway/nuclear factor-κB (UPP-NF-κB) in rats with atherosclerosis (AS), 58-week-old male Wistar rats were selected and randomly divided into the normal group, model group, control group, low-dose group, and high-dose group. The model group and the drug group are given intraperitoneal injections of vitamins, and the model group and the drug group are given a high-fat diet. Rats in the low-dose group and high-dose group are given low-dose and high-dose Dahuang Zhechong pill lavage solution, respectively. Besides, the control group is given simvastatin solution by gavage, and intervention is performed once a day for 12 weeks. Ubiquitin (Ub) protein expression, ubiquitin activase (UBE1), nuclear factor-κB, nuclear inhibitory factor-κB (IκB) gene expression, total cholesterol (TC), triglyceride (TG), low-density lipoprotein cholesterol (LDL-C), and serum tumor necrosis factor-α (TNF-α) are compared. The experimental result shows that Dahuang Zhechong pills can reduce inflammation and prevent and treat AS by blocking the activation of the UPP/NF-κB signaling pathway and can be used as a proteasome inhibitor in the clinical treatment of AS.


Asunto(s)
Aterosclerosis , FN-kappa B , Animales , Aterosclerosis/tratamiento farmacológico , Aterosclerosis/metabolismo , LDL-Colesterol/uso terapéutico , Medicamentos Herbarios Chinos , Masculino , FN-kappa B/metabolismo , FN-kappa B/uso terapéutico , Complejo de la Endopetidasa Proteasomal/uso terapéutico , Inhibidores de Proteasoma/uso terapéutico , Ratas , Ratas Wistar , Simvastatina/uso terapéutico , Activador de Tejido Plasminógeno/uso terapéutico , Triglicéridos , Factor de Necrosis Tumoral alfa/metabolismo , Factor de Necrosis Tumoral alfa/uso terapéutico , Ubiquitinas/uso terapéutico , Vitaminas/uso terapéutico
10.
J Hepatocell Carcinoma ; 9: 127-140, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-35300207

RESUMEN

Purpose: This study aimed to assess the efficacy and safety of adjuvant transarterial chemoembolization (TACE) plus tyrosine kinase inhibitor (TKI) treatment in patients with hepatocellular carcinoma (HCC) with a high risk of early recurrence after curative resection. Patients and Methods: Patients from multiple centres were divided into postoperative adjuvant TACE with (n=57) or without (n=142) TKI administration groups. The disease-free survival (DFS) curve was depicted by the Kaplan-Meier method, and the difference between the two groups was tested using the log rank test. Univariate and multivariate Cox analyses were performed to identify independent risk factors for DFS. Additionally, three propensity score analyses were performed to minimise the potential confounding factors to facilitate a more reliable conclusion. Adverse events (AEs) were assessed according to the Common Terminology Criteria for Adverse Events, version 4.0. Results: The 1-and 2-year DFS rates of the TACE plus TKI treatment group were 45.5% and 34.9%, respectively, which were significantly better than those of the TACE alone group (26.8% and 18.3%, respectively). Multivariate analysis identified adjuvant TACE plus TKI treatment as an independent prognostic factor for DFS (hazard ratio: 0.611, 95% confidence interval: 0.408-0.915, P=0.017). Further analysis based on the various propensity score methods yielded similar results. Subgroup analysis showed that patients with tumour diameter ≥5 cm, tumour number <3, absence of hepatic vein tumour thrombus and bile duct tumour thrombus, ruptured tumours, and stage IIIB could benefit more from TACE plus TKI treatment (all P<0.05). Some patients (33.33%) experienced grade ≥3 AEs in the TACE plus TKI group. Conclusion: TACE plus TKI treatment can reduce the incidence of early recurrence with tolerable adverse events in HCC patients at high risk of recurrence after hepatectomy and may be an appropriate option in postoperative anti-recurrence treatment.

11.
Crit Rev Anal Chem ; 52(7): 1606-1623, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-33840329

RESUMEN

Fraud in herbal medicines (HMs), commonplace throughout human history, is significantly related to medicinal effects with sometimes lethal consequences. Major HMs fraud events seem to occur with a certain regularity, such as substitution by counterfeits, adulteration by addition of inferior production-own materials, adulteration by chemical compounds, and adulteration by addition of foreign matter. The assessment of HMs fraud is in urgent demand to guarantee consumer protection against the four fraudulent activities. In this review, three analysis platforms (targeted, non-targeted, and the combination of non-targeted and targeted analysis) were introduced and summarized. Furthermore, the integration of analysis technology and chemometrics method (e.g., class-modeling, discrimination, and regression method) have also been discussed. Each integration shows different applicability depending on their advantages, drawbacks, and some factors, such as the explicit objective analysis or the nature of four types of HMs fraud. In an attempt to better solve four typical HMs fraud, appropriate analytical strategies are advised and illustrated with several typical studies. The article provides a general workflow of analysis methods that have been used for detection of HMs fraud. All analysis technologies and chemometrics methods applied can conduce to excellent reference value for further exploration of analysis methods in HMs fraud.


Asunto(s)
Quimiometría , Plantas Medicinales , Fraude , Humanos , Tecnología
12.
Front Plant Sci ; 12: 759248, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34691133

RESUMEN

Until now, the over-exploitation of wild resources has increased growing concern over the quality of wild medicinal plants. This led to the necessity of developing a rapid method for the evaluation of wild medicinal plants. In this study, the content of total secoiridoids (gentiopicroside, swertiamarin, and sweroside) of Gentiana rigescens from 37 different regions in southwest China were analyzed by high performance liquid chromatography (HPLC). Furthermore, Fourier transform infrared (FT-IR) was adopted to trace the geographical origin (331 individuals) and predict the content of total secoiridoids (273 individuals). In the traditional FT-IR analysis, only one scatter correction technique could be selected from a series of preprocessing candidates to decrease the impact of the light correcting effect. Nevertheless, different scatter correction techniques may carry complementary information so that using the single scatter correction technique is sub-optimal. Hence, the emerging ensemble approach to preprocessing fusion, sequential preprocessing through orthogonalization (SPORT), was carried out to fuse the complementary information linked to different preprocessing methods. The results suggested that, compared with the best results obtained on the scatter correction modeling, SPORT increased the accuracy of the test set by 12.8% in qualitative analysis and decreased the RMSEP by 66.7% in quantitative analysis.

13.
Sci Rep ; 11(1): 15200, 2021 07 26.
Artículo en Inglés | MEDLINE | ID: mdl-34312460

RESUMEN

Amomum tsao-ko, as an edible and medicinal variety, has been cultivated for more than 600 years in China. Recently, two cultivars, A. tsao-ko and Amomum paratsao-ko, were found in A. tsao-ko planting area. The two cultivars are often confused because of the similar phenotype and difficult to distinguish through sensory judgment. In this study, the non-targeted gas chromatography-mass spectrometry (GC-MS) metabolomics combined with near-infrared spectroscopy (NIRS) were used for dissecting the two cultivars with phenotypic differences. According to principal component analysis (PCA) loading diagram and orthogonal partial least squares discriminant analysis (OPLS-DA) S-plot of the metabolites, the accumulation of major components including 1,8-cineole, α-phellandrene, (E)-2-decenal, (-)-ß-pinene, (E)-2-octenal, 1-octanal, D-limonene, and decanal, were present differences between the two cultivars. Seven metabolites potential differentiated biomarkers as ß-selinene, decamethylcyclopentasiloxane, (E,Z)-2,6-dodecadienal, (E)-2-hexenal, (E)-2-decenal, isogeranial, 1,8-cineole and ß-cubebene were determined. Although A. tsao-ko and A. paratsao-ko belong to the same genera and are similar in plant and fruit morphology, the composition and content of the main components were exposed significant discrepancy, so it is necessary to distinguish them. In this study, the discriminant model established by GC-MS or NIRS combined with multivariate analysis has achieved a good classification effect. NIRS has the advantages of simple, fast and nondestructive and can be used for rapid identification of varieties and fruit tissues.


Asunto(s)
Amomum/química , Amomum/clasificación , Amomum/metabolismo , Frutas/química , Frutas/metabolismo , Cromatografía de Gases y Espectrometría de Masas , Plantas Medicinales/química , Plantas Medicinales/clasificación , Plantas Medicinales/metabolismo , Especificidad de la Especie , Espectroscopía Infrarroja Corta
14.
Funct Integr Genomics ; 20(6): 825-838, 2020 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-33009591

RESUMEN

MicroRNAs (miRNAs) have been reported to be correlated with various stress responses in soybean, but only a few miRNAs have been demonstrated to respond to low phosphorus (LP) stress. To unravel the response mechanisms of miRNAs to low-P stress, the roots of two representative soybean genotypes with different P efficiency, Nannong94-156 (a LP-tolerant genotype) and Bogao (a LP-sensitive genotype), were used for the construction of RNA sequencing (RNA-seq) libraries under low/normal-P treatment by high-throughput sequencing. In total, 603 existing miRNAs and 1699 novel miRNAs belonging to 248 and 1582 families in all samples were identified, respectively. Among these miRNAs, 777 miRNAs were differentially expressed (DE) across different P levels and genotypes. Furthermore, putative targets of DE miRNAs were predicted, and these miRNAs mainly targeted ERF (ethylene responsive factor), auxin response factors (ARF), zinc finger protein, MYB, and NAC domain transcription factors. Gene ontology (GO) analysis showed that targets of DE miRNAs were significantly enriched in binding, metabolic processes, biological regulation, response to stress, and phosphorus metabolic processes. In addition, the expression profiles of chosen P-responsive miRNAs and target genes were validated by quantitative real-time PCR (qRT-PCR). Our study focused on genome-wide miRNA identification in two representative soybean genotypes under low-P stress. Overall, the DE miRNAs across different P levels and genotypes and their putative target genes will provide useful information for further study of miRNAs mediating low-P response and facilitate improvements in soybean breeding.


Asunto(s)
Glycine max/genética , Secuenciación de Nucleótidos de Alto Rendimiento , MicroARNs/genética , Fósforo/metabolismo , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Genoma de Planta/efectos de los fármacos , Genoma de Planta/genética , Genotipo , MicroARNs/antagonistas & inhibidores , Fósforo/farmacología , Fitomejoramiento/métodos , ARN de Planta/genética , Glycine max/efectos de los fármacos , Glycine max/metabolismo
15.
Int J Mol Sci ; 21(18)2020 Sep 17.
Artículo en Inglés | MEDLINE | ID: mdl-32957498

RESUMEN

Low-phosphorus (low-P) stress has a significant limiting effect on crop yield and quality. Although the molecular mechanisms of the transcriptional level responsible for the low-P stress response have been studied in detail, the underlying epigenetic mechanisms in gene regulation remain largely unknown. In this study, we evaluated the changes in DNA methylation, gene expression and small interfering RNAs (siRNAs) abundance genome-wide in response to low-P stress in two representative soybean genotypes with different P-efficiencies. The DNA methylation levels were slightly higher under low-P stress in both genotypes. Integrative methylation and transcription analysis suggested a complex regulatory relationship between DNA methylation and gene expression that may be associated with the type, region, and extent of methylation. Association analysis of low-P-induced differential methylation and gene expression showed that transcriptional alterations of a small part of genes were associated with methylation changes. Dynamic methylation alterations in transposable element (TE) regions in the CHH methylation context correspond with changes in the amount of siRNA under low-P conditions, indicating an important role of siRNAs in modulating TE activity by guiding CHH methylation in TE regions. Together, these results could help to elucidate the epigenetic regulation mechanisms governing the responses of plants to abiotic stresses.


Asunto(s)
Metilación de ADN , Glycine max/metabolismo , Fósforo/metabolismo , ARN Interferente Pequeño/metabolismo , Estrés Fisiológico/genética , Elementos Transponibles de ADN/genética , Epigénesis Genética , Epigenómica , Perfilación de la Expresión Génica , Regulación de la Expresión Génica de las Plantas/genética , Genoma de Planta , Estudio de Asociación del Genoma Completo , ARN Interferente Pequeño/genética , RNA-Seq , Glycine max/genética
16.
PLoS One ; 15(8): e0230089, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-32760138

RESUMEN

Ecological stoichiometric should be incorporated into management and nutrient impacted ecosystems dynamic to understand the status of ecosystems and ecological interaction. The present study focused on ecological stoichiometric characteristics of soil, and leaves, stems, and roots of different macrophytes after the banning of seine fishing in Shengjin Lake. For C, N, and P analysis from leaves, stems, roots, and soil to explore their stoichiometric ratio and deriving environmental forces, four dominant plant communities (Vallisneria natans, Zizania latifolia, Trapa natans and Carex schmidtii) were collected. The concentration of C, N, P and C: N: P ratio in leaves, stems, roots, and soil among the plant communities varied significantly. Along the depth gradient high C: N was measured in C.schmidtii soil (7.08±1.504) but not vary significantly (P >0.05). High C: P result was found in T.natans (81.14±43.88) and in V.natans soil (81.40±42.57) respectively with no significant difference (p>0.05). Besides, N: P ratio measured high in V. natans (13.7±4.05) and showed significant variation (P<0.05). High leaf C: N and N: P ratio was measured in C. schmidtii and V. natans respectively. Nevertheless, high leaf C: P ratio was measured in Z. latifolia. From the three studied organs, leaf C: N and N: P ratio showed high values compared to root and stems. The correlation analysis result showed that at 0-10cm depth soil organic carbon (SOC) correlated negatively with stem total phosphorus (STP), and root total nitrogen (RTN) (P<0.05) but positively strongly with leaf total phosphorus (LTP) and leaf total nitrogen (LTN) (P<0.01) respectively. Soil total nitrogen (STN) at 0-10cm strongly positively correlated with leaf total phosphorus (LTP) (P<0.01) and positively with RN: P and leaf total carbon (LTC) (P<0.05). Soil basic properties such as soil moisture content (SMC), bulky density (BD) and pH positively correlated with soil ecological stoichiometric characteristics. Redundancy analysis (RDA) result showed available nitrogen (AN), soil total nitrogen (STN), and available phosphorus (AP) were the potential determinants variables on plants stoichiometric characteristics.


Asunto(s)
Plantas , Suelo , Carbono/análisis , Carex (Planta) , China , Ecosistema , Hydrocharitaceae , Lagos , Nitrógeno/análisis , Fósforo/análisis , Hojas de la Planta/química , Raíces de Plantas/química , Tallos de la Planta/química , Plantas/química , Poaceae , Suelo/química , Humedales , Lythraceae
17.
PLoS One ; 15(1): e0227243, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-31961887

RESUMEN

Low-phosphorus (LP) stress is a major factor limiting the growth and yield of soybean. Circular RNAs (circRNAs) are novel noncoding RNAs that play a crucial role in plant responses to abiotic stress. However, how LP stress mediates the biogenesis of circRNAs in soybean remains unclear. Here, to explore the response mechanisms of circRNAs to LP stress, the roots of two representative soybean genotypes with different P-use efficiency, Bogao (a LP-sensitive genotype) and Nannong 94156 (a LP-tolerant genotype), were used for the construction of RNA sequencing (RNA-seq) libraries and circRNA identification. In total, 371 novel circRNA candidates, including 120 significantly differentially expressed (DE) circRNAs, were identified across different P levels and genotypes. More DE circRNAs were significantly regulated by LP stress in Bogao than in NN94156, suggesting that the tolerant genotype was less affected by LP stress than the sensitive genotype was; in other words, NN94156 may have a better ability to maintain P homeostasis under LP stress. Moreover, a positive correlation was observed between the expression patterns of P stress-induced circRNAs and their circRNA-host genes. Gene Ontology (GO) enrichment analysis of these circRNA-host genes and microRNA (miRNA)-targeted genes indicated that these DE circRNAs were involved mainly in defense responses, ADP binding, nucleoside binding, organic substance catabolic processes, oxidoreductase activity, and signal transduction. Together, our results revealed that LP stress can significantly alter the genome-wide profiles of circRNAs and indicated that the regulation of circRNAs was both genotype and environment specific in response to LP stress. LP-induced circRNAs might provide a rich resource for LP-responsive circRNA candidates for future studies.


Asunto(s)
Glycine max/genética , Fósforo/metabolismo , ARN Circular/genética , ARN de Planta/genética , Regulación de la Expresión Génica de las Plantas , Ontología de Genes , Raíces de Plantas/genética , Raíces de Plantas/metabolismo , Glycine max/metabolismo , Estrés Fisiológico , Transcriptoma
18.
ACS Omega ; 4(20): 18820-18832, 2019 Nov 12.
Artículo en Inglés | MEDLINE | ID: mdl-31737844

RESUMEN

Paris polyphylla var. yunnanensis is a famous medicinal plant distributed in some Asian countries. This species has attracted a great deal of attention and is often used as raw materials in traditional medicine practices. With the purpose of gaining insight into the geoherbalism of wild P. polyphylla var. yunnanensis, a total of 183 dried rhizome samples from eight different regions including 16 typical or nontypical natural habitats have been analyzed by multispectral information fusion based on ultraviolet and Fourier transform infrared spectroscopies combined with partial least squares discriminant analysis (PLS-DA) and hierarchical cluster analysis. From the results, the use of multispectral information fusion strategy could improve the correct classification of samples, and good classification performances have been shown according to PLS-DA models. The discrimination of samples was obtained successfully with respect to the typical and nontypical natural habitats, different collection areas of typical natural habitats, and various sampling sites in nontypical natural habitats. Additionally, the similarities among samples were presented as well. Overall, the rhizome of wild P. polyphylla var. yunnanensis exhibited various regional dependence and individual differences according to the geographical origins, and the relatively appropriate growth region with better quality consistency of samples was preliminarily selected. This study also revealed that the developed multispectral information fusion method has the potential to be a reliable analytical methodology for capturing the geoherbalism differentiation in wild P. polyphylla var. yunnanensis. Furthermore, it could provide more chemical evidence for the critical supplement of quality evaluation on P. polyphylla var. yunnanensis.

19.
Zhongguo Zhong Yao Za Zhi ; 44(10): 1989-2008, 2019 May.
Artículo en Chino | MEDLINE | ID: mdl-31355552

RESUMEN

Polygonatum plants are perennial plants of Liliaceae. There are about 60 species reported at home and abroad,32 species in China,mainly distributed in the north temperate zone. Their main chemical components are steroidal saponins,polysaccharides,flavonoids,alkaloids,etc. They have anti-aging,anti-tumor,immunomodulation,antibacterial,antiviral,hypoglycemic and blood lipid effects. With the development of health industry,Polygonati Rhizome used as medicine and food has attracted great attention in recent years,and has become a research hotspot. However,the material basis of its efficacy is unclear and the product quality is uneven,which seriously limited the rapid upgrading of the industry. This review summarizes Polygonatum plants system classification,the chemical composition and pharmacological activity to provide theoretical basis for the development and utilization of Polygonatum plants.


Asunto(s)
Fitoquímicos/farmacología , Polygonatum/química , China , Fitoquímicos/química , Plantas Medicinales/química , Rizoma/química
20.
J Food Sci ; 83(7): 1823-1831, 2018 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-29870059

RESUMEN

Twelve chemical constituents were identified from the Agriophyllum squarrosum seed (ASS). ASS contained large amounts of flavonoids, which were more concentrated in the seed coat. ASS-coat (1 g) contained 335.7 µg flavonoids of rutin equivalent, which was similar to the flavonoid content in soybean (351.2 µg/g), and greater than that in millet, wheat, rice, peanut, and corn. By LC-MS analysis, the major constituents in ASS were 3-O-[α-L-rhamnopyranosyl-(1→6)-ß-D- glucopyranosyl]-7- O-(ß-D-glucopyranosyl)-quercetin (1), rutin (4), quercetin-3-O-ß-D- apiosyl(1→2)-[α-L-rhamnosyl(l→6)]-ß-D-glucoside (2), isorhamnetin-3-O-rutinoside (5), and allantoin (3), compared with isoflavonoids-genistin (16), daidzin (14), and glycitin (18) in soybean. Among constituents in ASS, compounds 1, 2, 4, protocatechuic acid (8), isoquercitrin (11), and luteolin-6-C-glucoside (12) potently scavenged DPPH radicals and intracellular ROS; strongly protected against peroxyl radical-induced DNA scission; and upregulated Nrf2, phosphorylated p38, phosphorylated JNK, and Bcl-2 in HepG2 cells. These results indicate that ASS is rich in antioxidant constituents that can enrich the varieties of food flavonoids, with significant beneficial implications for those who suffer from oxidative stress-related conditions. PRACTICAL APPLICATION: This study found that A. squarrosum seed contains large amounts of antioxidative flavonoids and compared its chemical constituents with those of conventional foods. These results should increase the interest in planting the sand-fixing A. squarrosum on a large scale, thus preventing desertification and providing valuable foods.


Asunto(s)
Amaranthaceae/química , Antioxidantes/análisis , Semillas/química , Daño del ADN , Flavonoides/análisis , Células Hep G2 , Humanos , Proteínas Quinasas JNK Activadas por Mitógenos , Factor 2 Relacionado con NF-E2 , Estrés Oxidativo , Fosforilación , Extractos Vegetales/química , Especies Reactivas de Oxígeno/análisis , Transducción de Señal , Glycine max/química , Espectrometría de Masas en Tándem , Proteínas Quinasas p38 Activadas por Mitógenos
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