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1.
Zhongguo Zhong Yao Za Zhi ; 48(1): 52-59, 2023 Jan.
Artículo en Chino | MEDLINE | ID: mdl-36725258

RESUMEN

This study investigated the choroplast genome sequence of wild Atractylodes lancea from Yuexi in Anhui province by high-throughput sequencing, followed by characterization of the genome structure, which laid a foundation for the species identification, analysis of genetic diversity, and resource conservation of A. lancea. To be specific, the total genomic DNA was extracted from the leaves of A. lancea with the improved CTAB method. The chloroplast genome of A. lancea was sequenced by the high-throughput sequencing technology, followed by assembling by metaSPAdes and annotation by CPGAVAS2. Bioiformatics methods were employed for the analysis of simple sequence repeats(SSRs), inverted repeat(IR) border, codon bias, and phylogeny. The results showed that the whole chloroplast genome of A. lancea was 153 178 bp, with an 84 226 bp large single copy(LSC) and a 18 658 bp small single copy(SSC) separated by a pair of IRs(25 147 bp). The genome had the GC content of 37.7% and 124 genes: 87 protein-coding genes, 8 rRNA genes, and 29 tRNA genes. It had 26 287 codons and encoded 20 amino acids. Phylogenetic analysis showed that Atractylodes species clustered into one clade and that A. lancea had close genetic relationship with A. koreana. This study established a method for sequencing the chloroplast genome of A. lancea and enriched the genetic resources of Compositae. The findings are expected to lay a foundation for species identification, analysis of genetic diversity, and resource conservation of A. lancea.


Asunto(s)
Atractylodes , Genoma del Cloroplasto , Lamiales , Filogenia , Atractylodes/genética , Secuenciación Completa del Genoma , Repeticiones de Microsatélite
2.
Zhong Yao Cai ; 36(3): 358-60, 2013 Mar.
Artículo en Chino | MEDLINE | ID: mdl-24010313

RESUMEN

OBJECTIVE: To establish a method for determination of trace elements in chrysanthemum and analyze trace elements in chrysanthemum from different habitats. METHODS: The preprocessing for determination of trace elements in chrysanthemum was carried out by microwave digestion,the content of trace elements in chrysanthemum was determined by ICP-MS. RESULTS: The content of trace elements of chryscmthemum varied with the habitats. CONCLUSION: The contents of trace elements as well as heavy metals of Chrysanthemum relate to its species and habitats to a certain degree.


Asunto(s)
Chrysanthemum/química , Medicamentos Herbarios Chinos/análisis , Ecosistema , Espectrometría de Masas , Oligoelementos/análisis , Chrysanthemum/crecimiento & desarrollo , Medicamentos Herbarios Chinos/química , Flores/química , Flores/crecimiento & desarrollo , Metales Pesados/análisis , Microondas
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