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1.
J Biol Chem ; 294(7): 2375-2385, 2019 02 15.
Artículo en Inglés | MEDLINE | ID: mdl-30545943

RESUMEN

GABAA receptors (GABAARs) are pentameric ligand-gated ion channels that mediate synaptic inhibition throughout the central nervous system. The α1ß2γ2 receptor is the major subtype in the brain; GABA binds at the ß2(+)α1(-) interface. The structure of the homomeric ß3 GABAAR, which is not activated by GABA, has been solved. Recently, four additional heteromeric structures were reported, highlighting key residues required for agonist binding. Here, we used a protein engineering method, taking advantage of knowledge of the key binding residues, to create a ß3(+)α1(-) heteromeric interface in the homomeric human ß3 GABAAR that enables GABA-mediated activation. Substitutions were made in the complementary side of the orthosteric binding site in loop D (Y87F and Q89R), loop E (G152T), and loop G (N66D and A70T). The Q89R and G152T combination enabled low-potency activation by GABA and potentiation by propofol but impaired direct activation by higher propofol concentrations. At higher concentrations, GABA inhibited gating of ß3 GABAAR variants containing Y87F, Q89R, and G152T. Reversion of Phe87 to tyrosine abolished GABA's inhibitory effect and partially recovered direct activation by propofol. This tyrosine is conserved in homomeric GABAARs and in the Erwinia chrysanthemi ligand-gated ion channel and may be essential for the absence of an inhibitory effect of GABA on homomeric channels. This work demonstrated that only two substitutions, Q89R and G152T, in ß3 GABAAR are sufficient to reconstitute GABA-mediated activation and suggests that Tyr87 prevents inhibitory effects of GABA.


Asunto(s)
Activación del Canal Iónico , Mutación Missense , Estructura Secundaria de Proteína , Receptores de GABA-B , Sustitución de Aminoácidos , Dominio Catalítico , Dickeya chrysanthemi/química , Dickeya chrysanthemi/genética , Dickeya chrysanthemi/metabolismo , Células HEK293 , Humanos , Propofol/farmacología , Receptores de GABA-B/química , Receptores de GABA-B/genética , Receptores de GABA-B/metabolismo , Ácido gamma-Aminobutírico/química , Ácido gamma-Aminobutírico/metabolismo
2.
Appl Environ Microbiol ; 77(15): 5184-91, 2011 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-21666025

RESUMEN

Ethanologenic Escherichia coli strain KO11 was sequentially engineered to contain the Klebsiella oxytoca cellobiose phosphotransferase genes (casAB) as well as a pectate lyase (pelE) from Erwinia chrysanthemi, yielding strains LY40A (casAB) and JP07 (casAB pelE), respectively. To obtain an effective secretion of PelE, the Sec-dependent pathway out genes from E. chrysanthemi were provided on a cosmid to strain JP07 to construct strain JP07C. Finally, oligogalacturonide lyase (ogl) from E. chrysanthemi was added to produce strain JP08C. E. coli strains LY40A, JP07, JP07C, and JP08C possessed significant cellobiase activity in cell lysates, while only strains JP07C and JP08C demonstrated extracellular pectate lyase activity. Fermentations conducted by using a mixture of pure sugars representative of the composition of sugar beet pulp (SBP) showed that strains LY40A, JP07, JP07C, and JP08C were able to ferment cellobiose, resulting in increased ethanol production from 15 to 45% in comparison to that of KO11. Fermentations with SBP at very low fungal enzyme loads during saccharification revealed significantly higher levels of ethanol production for LY40A, JP07C, and JP08C than for KO11. JP07C ethanol yields were not considerably higher than those of LY40A; however, oligogalacturonide polymerization studies showed an increased breakdown of biomass to small-chain (degree of polymerization, ≤6) oligogalacturonides. JP08C achieved a further breakdown of polygalacturonate to monomeric sugars, resulting in a 164% increase in ethanol yields compared to those of KO11. The addition of commercial pectin methylesterase (PME) further increased JP08C ethanol production compared to that of LY40A by demethylating the pectin for enzymatic attack by pectin-degrading enzymes.


Asunto(s)
Biocombustibles , Biomasa , Escherichia coli/metabolismo , Etanol/metabolismo , Lignina/metabolismo , Pectinas/metabolismo , beta-Glucosidasa/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Hidrolasas de Éster Carboxílico/metabolismo , Hidrolasas de Éster Carboxílico/farmacología , Cósmidos/genética , Dickeya chrysanthemi/genética , Dickeya chrysanthemi/metabolismo , Escherichia coli/genética , Fermentación , Ingeniería Genética , Klebsiella oxytoca/genética , Klebsiella oxytoca/metabolismo , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/genética , Sistema de Fosfotransferasa de Azúcar del Fosfoenolpiruvato/metabolismo , Polisacárido Liasas/genética , Polisacárido Liasas/metabolismo
3.
Proteomics ; 9(7): 1861-8, 2009 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-19333997

RESUMEN

Pectin methylesterases (PMEs) catalyse the removal of methyl esters from the homogalacturonan (HG) backbone domain of pectin, a ubiquitous polysaccharide in plant cell walls. The degree of methyl esterification (DE) impacts upon the functional properties of HG within cell walls and plants produce numerous PMEs that act upon HG in muro. Many microbial plant pathogens also produce PMEs, the activity of which renders HG more susceptible to cleavage by pectin lyase and polygalacturonase enzymes and hence aids cell wall degradation. We have developed a novel microarray-based approach to investigate the activity of a series of variant enzymes based on the PME from the important pathogen Erwinia chrysanthemi. A library of 99 E. chrysanthemi PME mutants was created in which seven amino acids were altered by various different substitutions. Each mutant PME was incubated with a highly methyl esterified lime pectin substrate and, after digestion the enzyme/substrate mixtures were printed as microarrays. The loss of activity that resulted from certain mutations was detected by probing arrays with a mAb (JIM7) that preferentially binds to HG with a relatively high DE. Active PMEs therefore resulted in diminished JIM7 binding to the lime pectin substrate, whereas inactive PMEs did not. Our findings demonstrate the feasibility of our approach for rapidly testing the effects on PME activity of substituting a wide variety of amino acids at different positions.


Asunto(s)
Sustitución de Aminoácidos/fisiología , Hidrolasas de Éster Carboxílico , Dickeya chrysanthemi/enzimología , Análisis por Micromatrices/métodos , Hidrolasas de Éster Carboxílico/genética , Hidrolasas de Éster Carboxílico/metabolismo , Interpretación Estadística de Datos , Dickeya chrysanthemi/genética , Dickeya chrysanthemi/metabolismo , Pectinas/metabolismo , Biblioteca de Péptidos , Reproducibilidad de los Resultados , Análisis de Secuencia de Proteína
4.
J Biol Chem ; 283(52): 36564-72, 2008 Dec 26.
Artículo en Inglés | MEDLINE | ID: mdl-18990691

RESUMEN

The intracellular fate of iron acquired by bacteria during siderophore-mediated assimilation is poorly understood. We investigated this question in the pathogenic enterobacterium Erwinia chrysanthemi. This bacterium produces two siderophores, chrysobactin and achromobactin, during plant infection. We analyzed the distribution of iron into cytosolic proteins in bacterial cells supplied with 59Fe-chrysobactin using native gel electrophoresis. A parental strain and mutants deficient in bacterioferritin (bfr), miniferritin (dps), ferritin (ftnA), bacterioferredoxin (bfd), or iron-sulfur cluster assembly machinery (sufABCDSE) were studied. In the parental strain, we observed two rapidly 59Fe-labeled protein signals identified as bacterioferritin and an iron pool associated to the protein chain-elongation process. In the presence of increased 59Fe-chrysobactin concentrations, we detected mini-ferritin-bound iron. Iron incorporation into bacterioferritin was severely reduced in nonpolar sufA, sufB, sufD, sufS, and sufE mutants but not in a sufC background. Iron recycling from bacterioferritin did not occur in bfd and sufC mutants. Iron depletion caused a loss of aconitase activity, whereas ferric chrysobactin supplementation stimulated the production of active aconitase in parental cells and in bfr and bfd mutants. Aconitase activity in sufA, sufB, sufD, sufS, and sufE mutant strains was 10 times lower than that in parental cells. In the sufC mutant, it was twice as low as that in the parental strain. Defects observed in the mutants were not caused by altered ferric chrysobactin transport. Our data demonstrate a functional link between bacterioferritin, bacterioferredoxin, and the Suf protein machinery resulting in optimal bacterial growth and a balanced distribution of iron between essential metalloproteins.


Asunto(s)
Proteínas Bacterianas/química , Grupo Citocromo b/química , Dickeya chrysanthemi/metabolismo , Ferritinas/química , Regulación Bacteriana de la Expresión Génica , Proteínas Hierro-Azufre/química , Hierro/metabolismo , Sideróforos/metabolismo , Proteínas Bacterianas/fisiología , Transporte Biológico , Grupo Citocromo b/fisiología , Dipéptidos/química , Electroforesis en Gel de Poliacrilamida , Ferritinas/fisiología , Hierro/química , Metaloproteínas/química , Modelos Biológicos , Mutación , Oxidación-Reducción , Plásmidos/metabolismo
5.
Mol Plant Microbe Interact ; 21(11): 1471-81, 2008 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-18842096

RESUMEN

Analysis of the regulators of the LacI family was performed in order to identify those potentially involved in pathogenicity of Erwinia chrysanthemi (Dickeya dadantii). Among the 18 members of the LacI family, the function of 11 members is either known or predicted and only 7 members have, as yet, no proposed function. Inactivation of these seven genes, called lfaR, lfbR, lfcR, lfdR, lfeR, lffR, and lfgR, demonstrated that four of them are important for plant infection. The lfaR and lfcR mutants showed a reduced virulence on chicory, Saintpaulia sp., and Arabidopsis. The lfeR mutant showed a reduced virulence on Arabidopsis. The lfdR mutant was more efficient than the wild-type strain in initiating maceration on Saintpaulia sp. The genetic environment of each regulator was examined to detect adjacent genes potentially involved in a common function. Construction of transcriptional fusions in these neighboring genes demonstrated that five regulators, LfaR, LfcR, LfeR, LffR, and LfgR, act as repressors of adjacent genes. Analysis of these fusions also indicated that the genes controlled by LfaR, LfcR, LfgR, and LffR are expressed during plant infection. Moreover, addition of crude plant extracts to culture medium demonstrated that the expression of the LfaR- and LfgR-controlled genes is specifically induced by plant components.


Asunto(s)
Proteínas Bacterianas/genética , Dickeya chrysanthemi/genética , Proteínas Represoras/genética , Proteínas Bacterianas/metabolismo , Proteínas Bacterianas/fisiología , Cichorium intybus/microbiología , Dickeya chrysanthemi/metabolismo , Dickeya chrysanthemi/patogenicidad , Represoras Lac , Familia de Multigenes/genética , Mutación , Proteínas Represoras/metabolismo , Proteínas Represoras/fisiología , Virulencia/genética
6.
J Bacteriol ; 190(3): 1045-53, 2008 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-18083823

RESUMEN

Erwinia chrysanthemi pv. zeae is one of the Erwinia chrysanthemi pathovars that infects on both dicotyledons and monocotyledons. However, little is known about the molecular basis and regulatory mechanisms of its virulence. By using a transposon mutagenesis approach, we cloned the genes coding for an E. chrysanthemi pv. zeae synthase of acyl-homoserine lactone (AHL) quorum-sensing signals (expI(Ecz)) and a cognate response regulator (expR(Ecz)). Chromatography analysis showed that expI(Ecz) encoded production of the AHL signal N-(3-oxo-hexanoyl)-homoserine lactone (OHHL). Null mutation of expI(Ecz) in the E. chrysanthemi pv. zeae strain EC1 abolished AHL production, increased bacterial swimming and swarming motility, disabled formation of multicell aggregates, and attenuated virulence of the pathogen on potato tubers. The mutation also marginally reduced the inhibitory activity of E. chrysanthemi pv. zeae on rice seed germination. The mutant phenotypes were rescued by either exogenous addition of AHL signal or in trans expression of expI(Ecz). These data demonstrate that the AHL-type QS signal plays an essential role in modulation of E. chrysanthemi pv. zeae cell motility and the ability to form multicell aggregates and is involved in regulation of bacterial virulence.


Asunto(s)
Acil-Butirolactonas/metabolismo , Proteínas Bacterianas/metabolismo , Dickeya chrysanthemi/fisiología , Dickeya chrysanthemi/patogenicidad , Regulación Bacteriana de la Expresión Génica , Percepción de Quorum , Secuencia de Aminoácidos , Adhesión Bacteriana , Proteínas Bacterianas/genética , Secuencia de Bases , Movimiento Celular , Dickeya chrysanthemi/genética , Dickeya chrysanthemi/metabolismo , Datos de Secuencia Molecular , Oryza/microbiología , Semillas/microbiología , Análisis de Secuencia de ADN , Solanum tuberosum/microbiología , Transactivadores/genética , Transactivadores/metabolismo , Virulencia
7.
Mol Microbiol ; 66(6): 1491-505, 2007 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-18028312

RESUMEN

Production of the essential virulence factors, called pectate lyases (Pels), in the phytopathogenic bacterium Erwinia chrysanthemi is controlled by a complex regulation system and responds to various stimuli, such as the presence of pectin or plant extracts, growth phase, temperature and iron concentration. The presence of pectin and growth phase are the most important signals identified. Eight regulators modulating the expression of the pel genes (encoding Pels) have been characterized. These regulators are organized in a network allowing a sequential functioning of the regulators during infection. Although many studies have been carried out, the mechanisms of control of Pel production by growth phase have not yet been elucidated. Here we report that a fis mutant of E. chrysanthemi showed a strong increase in transcription of the pel genes during exponential growth whereas induction of expression in the parental strain occurred at the end of exponential growth. This reveals that Fis acts to prevent an efficient transcription of pel genes at the beginning of exponential growth and also provides evidence of the involvement of Fis in the growth-phase regulation of the pel genes. By using in vitro DNA-protein interactions and transcription experiments, we find that Fis directly represses the pel gene expression at the transcription initiation step. In addition, we show that Fis acts in concert with KdgR, the main repressor responding to the presence of pectin compounds, to shut down the pel gene transcription. Finally, we find that active Fis is required for the efficient translocation of the Pels in growth medium. Together, these data indicate that Fis tightly controls the availability of Pels during pathogenesis by acting on both their production and their translocation in the external medium.


Asunto(s)
Proteínas Bacterianas/genética , Dickeya chrysanthemi/genética , Polisacárido Liasas/genética , Regiones Promotoras Genéticas/genética , Secuencia de Bases , ADN/metabolismo , Dickeya chrysanthemi/metabolismo , Dickeya chrysanthemi/patogenicidad , Ensayo de Cambio de Movilidad Electroforética , Datos de Secuencia Molecular , Regiones Operadoras Genéticas/genética , Reacción en Cadena de la Polimerasa , Unión Proteica , Proteínas Represoras/genética , Factores de Transcripción/genética , Transcripción Genética , Virulencia/genética
8.
J Bacteriol ; 189(19): 7053-61, 2007 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-17644603

RESUMEN

beta-1,4-Galactan is a major component of the ramified regions of pectin. Analysis of the genome of the plant pathogenic bacteria Erwinia chrysanthemi revealed the presence of a cluster of eight genes encoding proteins potentially involved in galactan utilization. The predicted transport system would comprise a specific porin GanL and an ABC transporter made of four proteins, GanFGK(2). Degradation of galactans would be catalyzed by the periplasmic 1,4-beta-endogalactanase GanA, which released oligogalactans from trimer to hexamer. After their transport through the inner membrane, oligogalactans would be degraded into galactose by the cytoplasmic 1,4-beta-exogalactanase GanB. Mutants affected for the porin or endogalactanase were unable to grow on galactans, but they grew on galactose and on a mixture of galactotriose, galactotetraose, galactopentaose, and galactohexaose. Mutants affected for the periplasmic galactan binding protein, the transporter ATPase, or the exogalactanase were only able to grow on galactose. Thus, the phenotypes of these mutants confirmed the functionality of the gan locus in transport and catabolism of galactans. These mutations did not affect the virulence of E. chrysanthemi on chicory leaves, potato tubers, or Saintpaulia ionantha, suggesting an accessory role of galactan utilization in the bacterial pathogeny.


Asunto(s)
Dickeya chrysanthemi/genética , Dickeya chrysanthemi/metabolismo , Galactanos/metabolismo , Transportadoras de Casetes de Unión a ATP/genética , Transportadoras de Casetes de Unión a ATP/metabolismo , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Cichorium intybus/microbiología , Electroforesis en Gel de Poliacrilamida , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Genes Bacterianos , Genoma Bacteriano , Glucosa/farmacología , Familia de Multigenes , Mutación , Protones , Solanum tuberosum/microbiología , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Sacarosa/farmacología , Temperatura
9.
J Bacteriol ; 187(6): 2157-62, 2005 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-15743964

RESUMEN

Erwinia chrysanthemi is a phytopathogenic bacterium that causes soft-rot diseases in a broad number of crops. The PhoP-PhoQ system is a key factor in pathogenicity of several bacteria and is involved in the bacterial resistance to different factors, including acid stress. Since E. chrysanthemi is confronted by acid pH during pathogenesis, we have studied the role of this system in the virulence of this bacterium. In this work, we have isolated and characterized the phoP and phoQ mutants of E. chrysanthemi strain 3937. It was found that: (i) they were not altered in their growth at acid pH; (ii) the phoQ mutant showed diminished ability to survive at acid pH; (iii) susceptibility to the antimicrobial peptide thionin was increased; (iv) the virulence of the phoQ mutant was diminished at low and high magnesium concentrations, whereas the virulence of the phoP was diminished only at low magnesium concentrations; (v) in planta Pel activity of both mutant strains was drastically reduced; and (vi) both mutants lagged behind the wild type in their capacity to change the apoplastic pH. These results suggest that the PhoP-PhoQ system plays a role in the virulence of this bacterium in plant tissues, although it does not contribute to bacterial growth at acid pH.


Asunto(s)
Péptidos Catiónicos Antimicrobianos/metabolismo , Proteínas Bacterianas/metabolismo , Dickeya chrysanthemi/metabolismo , Dickeya chrysanthemi/patogenicidad , Pectinas/metabolismo , Ácidos/metabolismo , Cichorium intybus/microbiología , Medios de Cultivo , Dickeya chrysanthemi/crecimiento & desarrollo , Farmacorresistencia Bacteriana , Ácidos Grasos Volátiles/metabolismo , Concentración de Iones de Hidrógeno , Enfermedades de las Plantas/microbiología , Proteínas de Plantas/metabolismo , Virulencia
10.
Mol Microbiol ; 51(5): 1361-74, 2004 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-14982630

RESUMEN

Erwinia chrysanthemi causes soft-rot diseases of various plants by enzymatic degradation of the pectin in plant cell walls. The linear regions of pectin are composed of an acidic sugar, D-galacturonic acid. The ramified regions of pectin also include neutral sugars, and are rich in L-rhamnose residues. E. chrysanthemi is able to degrade these polysaccharides, polygalacturonate and rhamnogalacturonate. In E. chrysanthemi, the production of pectinases acting on linear regions is induced in the presence of polygalacturonate by a mechanism involving the repressor KdgR. The induction of the two adjacent E. chrysanthemi genes, designated rhiT and rhiN, is maximal after the simultaneous addition of both polygalacturonate and L-rhamnose. The rhiT product is homologous to the oligogalacturonide transporter TogT of E. chrysanthemi. The rhiN product is homologous to various proteins of unknown function, including a protein encoded by the plant-inducible locus picA of Agrobacterium tumefaciens. Both rhiT and rhiN are highly induced during plant infection. Various data suggest that RhiT and RhiN are involved in rhamnogalacturonate catabolism. RhiN is able to degrade the oligomers liberated by the rhamnogalacturonate lyase RhiE. The induction of the rhiTN operon in the presence of polygalacturonate results from control by the repressor KdgR. The additional induction of these genes by rhamnose is directly mediated by RhaS, a protein homologous to the activator of rhamnose catabolism in Escherichia coli. The virulence of an E. chrysanthemi rhaS mutant towards different host plants was clearly reduced. In this phytopathogenic bacterial species, RhaS positively regulates the transcription of the rhaBAD operon, involved in rhamnose catabolism, of the rhiE gene and of the rhiTN operon. The regulator RhaS plays a larger role in E. chrysanthemi than in other enterobacteria. Indeed, the RhaS control is not restricted to the catabolism of rhamnose but is extended to the degradation of plant polysaccharides that contain this sugar.


Asunto(s)
Proteínas Bacterianas/metabolismo , Proteínas de Unión al ADN/metabolismo , Dickeya chrysanthemi/genética , Dickeya chrysanthemi/metabolismo , Pectinas/metabolismo , Transactivadores/metabolismo , Proteínas Bacterianas/genética , Secuencia de Bases , Cichorium intybus/microbiología , Proteínas de Unión al ADN/genética , Dickeya chrysanthemi/patogenicidad , Regulación Bacteriana de la Expresión Génica , Genes Bacterianos , Datos de Secuencia Molecular , Mutación , Operón , Alineación de Secuencia , Transactivadores/genética
11.
J Bacteriol ; 185(10): 3091-100, 2003 May.
Artículo en Inglés | MEDLINE | ID: mdl-12730169

RESUMEN

Erwinia chrysanthemi causes soft-rot diseases of various plants by enzymatic degradation of the pectin in plant cell walls. Pectin is a complex polysaccharide. The main chain is constituted of galacturonate residues, and some of them are modified by methyl and/or acetyl esterification. Esterases are necessary to remove these modifications and, thus, to facilitate the further degradation of the polysaccharidic chain. In addition to PaeY, the first pectin acetylesterase identified in the E. chrysanthemi strain 3937, we showed that this bacterium produces a second pectin acetylesterase encoded by the gene paeX. The paeX open reading frame encodes a 322-residue precursor protein of 34,940 Da, including a 21-amino-acid signal peptide. Analysis of paeX transcription, by using gene fusions, revealed that it is induced by pectic catabolic products and affected by catabolite repression. The expression of paeX is regulated by the repressor KdgR, which controls all the steps of pectin catabolism; by the repressor PecS, which controls most of the pectinase genes; and by catabolite regulatory protein, the global activator of sugar catabolism. The paeX gene is situated in a cluster of genes involved in the catabolism and transport of pectic oligomers. In induced conditions, the two contiguous genes kdgM, encoding an oligogalacturonate-specific porin, and paeX are both transcribed as an operon from a promoter proximal to kdgM, but transcription of paeX can also be uncoupled from that of kdgM in noninduced conditions. PaeX is homologous to the C-terminal domain of the Butyrivibrio fibriosolvens xylanase XynB and to a few bacterial esterases. PaeX contains the typical box (GxSxG) corresponding to the active site of the large family of serine hydrolases. Purified PaeX releases acetate from various synthetic substrates and from sugar beet pectin. The PaeX activity increased after previous depolymerization and demethylation of pectin, indicating that its preferred substrates are nonmethylated oligogalacturonides. PaeX is mostly found in the periplasmic space of E. chrysanthemi. These data suggest that PaeX is mainly involved in the deacetylation of esterified oligogalacturonides that enter the periplasm by the KdgM porin.


Asunto(s)
Dickeya chrysanthemi/genética , Esterasas/genética , Esterasas/metabolismo , Secuencia de Aminoácidos , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Sitios de Unión , Clonación Molecular , Dickeya chrysanthemi/metabolismo , Dickeya chrysanthemi/patogenicidad , Regulación Bacteriana de la Expresión Génica , Datos de Secuencia Molecular , Familia de Multigenes , Operón , Pectinas/metabolismo , Periplasma/metabolismo , Enfermedades de las Plantas/microbiología , Regiones Promotoras Genéticas , Proteínas Represoras/genética , Proteínas Represoras/metabolismo , Análisis de Secuencia de ADN , Homología de Secuencia de Aminoácido , Factores de Transcripción/genética , Factores de Transcripción/metabolismo , Transcripción Genética
12.
EMBO J ; 22(3): 427-37, 2003 Feb 03.
Artículo en Inglés | MEDLINE | ID: mdl-12554644

RESUMEN

Proteins containing [Fe-S] clusters perform essential functions in all domains of life. Previously, we identified the sufABCDSE operon as being necessary for virulence of the plant pathogen Erwinia chrysanthemi. In addition, we collected preliminary evidence that the sufABCDSE operon might be involved in the assembly of [Fe-S] clusters. Of particular interest are the sufB, sufC and sufD genes, which are conserved among Eubacteria, Archaea, plants and parasites. The present study establishes SufC as an unorthodox ATPase of the ABC superfamily that is located in the cytosol, wherein it interacts with both SufB and SufD. Moreover, under oxidative stress conditions, SufC was found to be necessary for the activity of enzymes containing oxygen-labile [Fe-S] clusters, but dispensable for glutamate synthase, which contains an oxidatively stable [Fe-S] cluster. Lastly, we have shown SufBCD to be essential for iron acquisition via chrysobactin, a siderophore of major importance in virulence. We discuss a model wherein the SufBCD proteins contribute to bacterial pathogenicity via their role in the assembly of [Fe-S] clusters under oxidative stress and iron limitation.


Asunto(s)
Adenosina Trifosfatasas/metabolismo , Proteínas Bacterianas/metabolismo , Proteínas Hierro-Azufre/metabolismo , Hierro/metabolismo , Estrés Oxidativo , Azufre/metabolismo , Adenosina Trifosfatasas/genética , Proteínas Bacterianas/genética , Fraccionamiento Celular , Citoplasma/química , Citoplasma/metabolismo , Dickeya chrysanthemi/metabolismo , Proteínas Hierro-Azufre/genética , Familia de Multigenes , Operón , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo , Proteínas de Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/metabolismo , Técnicas del Sistema de Dos Híbridos
13.
Mol Plant Microbe Interact ; 15(11): 1181-91, 2002 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-12423024

RESUMEN

Two major virulence determinants of the plant-pathogenic enterobacterium Erwinia chrysanthemi strain 3937 are the production of pectate lyase enzymes that degrade plant cell walls and expression of two high-affinity iron uptake systems mediated by two structurally unrelated siderophores, chrysobactin and achromobactin. Low iron availability is a signal that triggers transcription of the genes encoding pectate lyases PelD and PelE as well as that of genes involved in iron transport. This metalloregulation is mediated by the transcriptional repressor Fur. In this study, we analyzed the molecular mechanisms of this control. We purified the Erwinia chrysanthemi Fur protein. Band shift assays showed that Fur specifically binds in vitro to the regulatory regions of the genes encoding the ferrichrysobactin outer membrane receptor Fct and the pectate lyases PelD and PelE. We identified the Fur-binding sites of these promoter regions by performing DNase I footprinting experiments. From these data, we propose that Fur could inhibit the activation of the pelD and pelE genes by the cAMP receptor protein CRP according to an anti-activation mechanism. To identify other possible effectors involved in this control, we screened a bank of insertion mutants for an increase in transcriptional activity of pelD and fct genes in response to iron limitation. We isolated a mutant affected in the kdgK gene encoding the 2-keto-3-deoxygluconate (KDG) kinase, an enzyme involved in pectin catabolism. The growth of this mutant in the presence of pectic compounds led to a constitutive expression of iron transport genes as well as complete derepression of the pectinolysis genes. This effect was caused by intracellular accumulation of KDG. However, the derepression of iron transport genes by KDG does not involve the KdgR regulator of pectinolysis genes, which uses KDG as inducer. Thus, in Erwinia chrysanthemi, iron depletion or presence of KDG induces transcription of the genes involved in iron assimilation and pectinolysis. These important pathogenicity functions are coregulated by responding to common signals encountered in planta.


Asunto(s)
Dickeya chrysanthemi/genética , Hierro/metabolismo , Pectinas/metabolismo , Factores de Transcripción , Proteínas de la Membrana Bacteriana Externa/genética , Proteínas de la Membrana Bacteriana Externa/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Secuencia de Bases , Sitios de Unión/genética , Pared Celular/metabolismo , Citratos/metabolismo , Dickeya chrysanthemi/metabolismo , Dickeya chrysanthemi/patogenicidad , Dipéptidos/metabolismo , Dipéptidos/farmacología , Regulación Bacteriana de la Expresión Génica/efectos de los fármacos , Gluconatos , Ácidos Cetoglutáricos/metabolismo , Datos de Secuencia Molecular , Mutación , Fosfotransferasas (Aceptor de Grupo Alcohol)/genética , Fosfotransferasas (Aceptor de Grupo Alcohol)/metabolismo , Enfermedades de las Plantas/microbiología , Polisacárido Liasas/genética , Polisacárido Liasas/metabolismo , Unión Proteica , Receptores de Superficie Celular/genética , Receptores de Superficie Celular/metabolismo , Proteínas Represoras/genética , Proteínas Represoras/metabolismo , Homología de Secuencia de Ácido Nucleico , Sideróforos/metabolismo , Transducción de Señal/genética , Transducción de Señal/fisiología , Virulencia
14.
Mol Microbiol ; 41(5): 1113-23, 2001 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-11555291

RESUMEN

The bacterium Erwinia chrysanthemi, which causes soft rot disease on various plants, is able to use pectin as a carbon source for growth. Knowledge of the critical step in pectin catabolism which allows the entry of pectic oligomers into the cells is scarce. We report here the first example of a transport system involved in the uptake of pectic oligomers. The TogMNAB transporter of E. chrysanthemi is a member of the ATP-binding cassette (ABC) superfamily. TogM and TogN are homologous to the inner membrane components, TogA exhibits the signature of ABC ATPases and TogB shows similarity with periplasmic ligand-binding proteins. The TogMNAB transporter is a new member of the carbohydrate uptake transporter-1 family (CUT1, TC no. 3.1.1), which is specialized in the transport of complex sugars. The four genes, togM, togN, togA and togB, are apparently co-transcribed in a large operon which also includes the pectate lyase gene pelW. The transcription of the tog operon is induced in the presence of pectic derivatives and is affected by catabolite repression. It is controlled by the KdgR repressor and the CRP activator. The TogMNAB system is able to provide Escherichia coli with the ability to transport oligogalacturonides. In E. chrysanthemi, the TogMNAB system seems to play a major role in switching on the induction of pectin catabolism. TogB also acts as a specific receptor for chemotaxis towards oligogalacturonides. The decreased capacity of maceration of a togM mutant indicates the importance of transport and/or attraction of oligogalacturonides for E. chrysanthemi pathogenicity.


Asunto(s)
Transportadoras de Casetes de Unión a ATP/genética , Proteínas Bacterianas/genética , Dickeya chrysanthemi/metabolismo , Regulación Bacteriana de la Expresión Génica , Oligosacáridos/metabolismo , Pectinas/metabolismo , Transportadoras de Casetes de Unión a ATP/metabolismo , Proteínas Bacterianas/metabolismo , Secuencia de Bases , Transporte Biológico Activo , Dickeya chrysanthemi/genética , Dickeya chrysanthemi/crecimiento & desarrollo , Dickeya chrysanthemi/patogenicidad , Datos de Secuencia Molecular , Familia de Multigenes , Enfermedades de las Plantas/microbiología , Hojas de la Planta/microbiología , Transcripción Genética
15.
Mol Microbiol ; 41(5): 1125-32, 2001 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-11555292

RESUMEN

Erwinia chrysanthemi causes soft rot of plants by secreting pectinases which cleave pectin, a polysaccharide cementing the plant cell wall constituents. We demonstrated that two transporters mediate the uptake of the extracellularly formed oligomers in E. chrysanthemi. TogMNAB, a multicomponent transporter member of the ATP-binding cassette (ABC) superfamily, is only partially responsible for the uptake of pectic oligomers. Its action is completed by that of the second transporter, TogT, a member of the glycoside-pentoside-hexuronide (GPH) family (TC no. 2.2) which includes transporters involved in the uptake of complex sugars, mostly oligosaccharides and glycosides. Each transport system, TogMNAB and TogT, is able to independently mediate the transport of oligogalacturonides and the simultaneous inactivation of both is necessary to give a total absence of growth with pectin as the carbon source. The togT gene constitutes an independent transcriptional unit. Its expression is induced in the presence of pectic derivatives and it is subject to catabolite repression. In vitro, the repressor KdgR and the activator CRP both interact directly with the togT regulatory region. The decreased pathogenicity of single and double togT, togM mutants indicated that a deficiency in uptake of pectic oligomers leads to reduced bacterial multiplication which, in turn, limits plant maceration.


Asunto(s)
Transportadoras de Casetes de Unión a ATP/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Dickeya chrysanthemi/metabolismo , Proteínas de Transporte de Monosacáridos/genética , Proteínas de Transporte de Monosacáridos/metabolismo , Oligosacáridos/metabolismo , Factores de Transcripción , Transportadoras de Casetes de Unión a ATP/genética , Secuencia de Bases , Sitios de Unión , Transporte Biológico Activo , Secuencia de Carbohidratos , Proteínas Portadoras , Proteína Receptora de AMP Cíclico/metabolismo , Dickeya chrysanthemi/genética , Regulación Bacteriana de la Expresión Génica , Datos de Secuencia Molecular , Mutación , Pectinas/metabolismo , Proteínas Represoras/metabolismo , Transcripción Genética
16.
Mol Plant Microbe Interact ; 14(6): 816-20, 2001 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-11386378

RESUMEN

The negative regulatory protein ExuR in Erwinia chrysanthemi regulates expression of the galacturonate uptake (exuT) and utilization (uxaA, uxaB, uxaC) genes. We cloned and determined the nucleotide sequence of the exuR gene from E. chrysanthemi EC16. Analysis of the deduced amino acid sequence indicates that this protein possesses a helix-turn-helix motif and belongs to the GntR family of transcriptional repressors. Northern blot analysis and studies with transcriptional fusions of exuT in wild-type and exuR mutant backgrounds indicate that exuT transcription is deregulated in the exuR strain in vivo and in planta. [14C]-galacturonic acid uptake was constitutively high under inducing and noninducing conditions in the exuR mutant. Maximal exuT transcription activity was observed within 8 h of bacterial inoculation into potato tubers, well before any visible symptoms of disease were detected. This suggests that ExuT transport activity in E. chrysanthemi is important in the early stages of disease development.


Asunto(s)
Proteínas Bacterianas , Dickeya chrysanthemi/genética , Proteínas de Escherichia coli , Proteínas Fúngicas/genética , Regulación Fúngica de la Expresión Génica , Ácidos Hexurónicos/metabolismo , Proteínas de la Membrana/genética , Factores de Transcripción , Secuencia de Aminoácidos , Transporte Biológico Activo , Clonación Molecular , Proteínas de Unión al ADN/genética , Dickeya chrysanthemi/metabolismo , Disacáridos/metabolismo , Proteínas Fúngicas/metabolismo , Secuencias Hélice-Giro-Hélice , Proteínas de la Membrana/metabolismo , Datos de Secuencia Molecular , Pectinas/metabolismo , Enfermedades de las Plantas/genética , Proteínas Represoras/genética , Solanum tuberosum/microbiología , Azúcares Ácidos/metabolismo
17.
J Bacteriol ; 183(10): 3134-41, 2001 May.
Artículo en Inglés | MEDLINE | ID: mdl-11325942

RESUMEN

Erwinia chrysanthemi is a phytopathogenic enterobacterium causing soft rot disease in a wide range of plants. Osmoregulated periplasmic glucans (OPGs) are intrinsic components of the gram-negative bacterial envelope. We cloned the opgGH operon of E. chrysanthemi, encoding proteins involved in the glucose backbone synthesis of OPGs, by complementation of the homologous locus mdoGH of Escherichia coli. OpgG and OpgH show a high level of similarity with MdoG and MdoH, respectively, and mutations in the opgG or opgH gene abolish OPG synthesis. The opg mutants exhibit a pleiotropic phenotype, including overproduction of exopolysaccharides, reduced motility, bile salt hypersensitivity, reduced protease, cellulase, and pectate lyase production, and complete loss of virulence. Coinoculation experiments support the conclusion that OPGs present in the periplasmic space of the bacteria are necessary for growth in the plant host.


Asunto(s)
Dickeya chrysanthemi/patogenicidad , Proteínas de Escherichia coli , Glucanos/metabolismo , Periplasma/metabolismo , Proteínas Periplasmáticas , Proteínas Bacterianas/genética , Cichorium intybus/microbiología , Clonación Molecular , Medios de Cultivo , Elementos Transponibles de ADN , Dickeya chrysanthemi/genética , Dickeya chrysanthemi/metabolismo , Prueba de Complementación Genética , Proteínas de la Membrana/genética , Datos de Secuencia Molecular , Mutación , Operón , Enfermedades de las Plantas/microbiología , Solanum tuberosum/microbiología , Virulencia
18.
Trends Microbiol ; 4(6): 232-7, 1996 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-8795159

RESUMEN

Iron is unlikely to be readily available in plant tissues for invading microorganisms. Soft rot, caused by Erwinia chrysanthemi strain 3937 on African violets, is a valuable model for studying the role of iron and its ligands in plant-pathogen interactions. These studies could lead to the development of new control strategies against microbial infections of plants.


Asunto(s)
Hierro/metabolismo , Plantas/metabolismo , Plantas/microbiología , Secuencia de Carbohidratos , Dickeya chrysanthemi/genética , Dickeya chrysanthemi/metabolismo , Dickeya chrysanthemi/patogenicidad , Homeostasis , Datos de Secuencia Molecular , Pectinas/química , Pectinas/metabolismo , Enfermedades de las Plantas/microbiología , Sideróforos/metabolismo , Virulencia
19.
Int J Biol Macromol ; 16(6): 306-12, 1994 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-7727344

RESUMEN

Many strains of Erwinia chrysanthemi, which are Gram-negative bacterial phytopathogens, produce copious amounts of extracellular polysaccharides. The extracellular polysaccharide from E. chrysanthemi pv. zeae strain SR 260, a phytopathogen of corn, is a branched-chain glucomannorhamnan of proven structure (Gray et al., Carbohydr. Res. 1993, 245, 271-287). The extracellular polysaccharide from E. chrysanthemi Ech6 is different, containing no rhamnose or mannose. It is composed of L-fucose, D-galactose, D-glucose and D-glucuronic acid in the ratio 2:2:1:1. The structure of the polysaccharide is as follows: [sequence: see text]


Asunto(s)
Dickeya chrysanthemi/metabolismo , Polisacáridos Bacterianos/aislamiento & purificación , Conformación de Carbohidratos , Secuencia de Carbohidratos , Dickeya chrysanthemi/clasificación , Dickeya chrysanthemi/patogenicidad , Cromatografía de Gases y Espectrometría de Masas , Espectroscopía de Resonancia Magnética , Datos de Secuencia Molecular , Polisacáridos Bacterianos/química , Solanum tuberosum/microbiología , Especificidad de la Especie
20.
J Bacteriol ; 175(13): 4263-5, 1993 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-8320243

RESUMEN

Uptake of [14C]galacturonic acid in Erwinia chrysanthemi was found to be stimulated during growth on pectin and its degradation products, saturated digalacturonic acid and galacturonic acid. Cells isolated from macerated potato tissue also showed increased levels of uptake activity for this molecule compared with those showed by glycerol-grown cells. Uptake was found to be an active process, and it displayed saturation kinetics. An Escherichia coli galacturonic acid transport mutant harboring the E. chrysanthemi exuT gene(s) for galacturonic acid uptake was able to transport galacturonic acid but unable to take up the dimer [3H]digalacturonic acid.


Asunto(s)
Dickeya chrysanthemi/metabolismo , Ácidos Hexurónicos/metabolismo , Transporte Biológico Activo , Glicerol/metabolismo , Mutación , Pectinas/metabolismo , Solanum tuberosum/microbiología
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