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1.
Int J Biol Macromol ; 175: 67-78, 2021 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-33548318

RESUMEN

Bufadienolides are the main active ingredients of Venenum Bufonis, which is a widely used traditional Chinese medicine secreted from parotoid gland and skin glands of Bufo bufo gargarizans. According to the transcriptome analysis, "cholesterol-bile acid-bufadienolidies pathway" was proposed as animal-derived bufadienolides biosynthesis pathway by us previously. In this pathway 3ß-hydroxysteroid dehydrogenase (3ßHSD) and steroid 5ß-reductase (SRD5ß) might be the key enzymes to convert the A/B ring to cis-configuration. Therefore, as the second report of our group, here we report the cloning of the full length of SRD5ß cDNA of B. bufo gargarizans (Bbg-SRD5ß) from the parotoid gland of B. bufo gargarizans for the first time, and site-directed mutagenesis was used to explored the character of Bbg-SRD5ß. Bbg-SRD5ß had an open reading frame of 981 bp and encoded 326 amino acids residues. The expression conditions of the recombinant Bbg-SRD5ß in E. coli BL21 (DE3) harbored with pCold-Bbg-SRD5ß was optimized as induction for 10 h at 15 °C with 0.1 mM IPTG. With NADPH as a cofactor, Bbg-SRD5ß can reduce the Δ4,5 double bonds of progesterone to generate dihydroprogesterone õwithout substrate inhibition effect. The catalytic rate of mutant type Bbg-SRD5ß-Y132G was 1.8 times higher than that of wild type Bbg-SRD5ß. Although Bbg-SRD5ß was almost unable to reduce the progesterone to dihydroprogesterone after mutation of V309, the affinity of enzyme with NADPH changed significantly. Bbg-SRD5ß is the key enzymes to convert the A/B ring of steroid to cis-configuration, and V309 is a key site affecting the binding affinity of enzyme with NADPH, and the mutation of Y132 can adjust the catalytic rate of Bbg-SRD5ß.


Asunto(s)
Venenos de Anfibios/química , Bufo bufo/metabolismo , Oxidorreductasas/aislamiento & purificación , Secuencia de Aminoácidos , Venenos de Anfibios/metabolismo , Animales , Bufanólidos/química , Bufanólidos/metabolismo , Bufonidae/metabolismo , Clonación Molecular/métodos , ADN Complementario/metabolismo , Sistemas de Lectura Abierta , Oxidorreductasas/genética , Oxidorreductasas/metabolismo , Esteroides/metabolismo
2.
J Enzyme Inhib Med Chem ; 34(1): 1439-1450, 2019 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-31409157

RESUMEN

Leishmaniasis is a tropical disease found in more than 90 countries. The drugs available to treat this disease have nonspecific action and high toxicity. In order to develop novel therapeutic alternatives to fight this ailment, pteridine reductase 1 (PTR1) and dihydrofolate reductase-thymidylate synthase (DHF-TS) have been targeted, once Leishmania is auxotrophic for folates. Although PTR1 and DHFR-TS from other protozoan parasites have been studied, their homologs in Leishmania chagasi have been poorly characterized. Hence, this work describes the optimal conditions to express the recombinant LcPTR1 and LcDHFR-TS enzymes, as well as balanced assay conditions for screening. Last but not the least, we show that 2,4 diaminopyrimidine derivatives are low-micromolar competitive inhibitors of both enzymes (LcPTR1 Ki = 1.50-2.30 µM and LcDHFR Ki = 0.28-3.00 µM) with poor selectivity index. On the other hand, compound 5 (2,4-diaminoquinazoline derivative) is a selective LcPTR1 inhibitor (Ki = 0.47 µM, selectivity index = 20).


Asunto(s)
Inhibidores Enzimáticos/farmacología , Leishmania infantum/enzimología , Complejos Multienzimáticos/antagonistas & inhibidores , Oxidorreductasas/antagonistas & inhibidores , Timidilato Sintasa/antagonistas & inhibidores , Catálisis , Cromatografía de Afinidad , Clonación Molecular , Evaluación Preclínica de Medicamentos , Electroforesis en Gel de Poliacrilamida , Escherichia coli/genética , Concentración 50 Inhibidora , Complejos Multienzimáticos/genética , Complejos Multienzimáticos/aislamiento & purificación , Complejos Multienzimáticos/metabolismo , Oxidorreductasas/genética , Oxidorreductasas/aislamiento & purificación , Oxidorreductasas/metabolismo , Tetrahidrofolato Deshidrogenasa/genética , Tetrahidrofolato Deshidrogenasa/aislamiento & purificación , Tetrahidrofolato Deshidrogenasa/metabolismo , Timidilato Sintasa/genética , Timidilato Sintasa/aislamiento & purificación , Timidilato Sintasa/metabolismo
3.
Org Lett ; 20(24): 7807-7810, 2018 12 21.
Artículo en Inglés | MEDLINE | ID: mdl-30511859

RESUMEN

Solanaceous medicinal plants produce tropane alkaloids (TAs). We discovered a novel gene from Atropa belladonna, AbPPAR, which encodes a phenylpyruvic acid reductase required for TA biosynthesis. AbPPAR was specifically expressed in root pericycles and endodermis. AbPPAR was shown to catalyze reduction of phenylpyruvic acid to phenyllactic acid, a precursor of TAs. Suppression of AbPPAR disrupted TA biosynthesis through reduction of phenyllactic acid levels. In summary, we identified a novel enzyme involved in TA biosynthesis.


Asunto(s)
Alcaloides/biosíntesis , Oxidorreductasas/metabolismo , Ácidos Fenilpirúvicos/metabolismo , Tropanos/metabolismo , Alcaloides/química , Atropa belladonna/química , Atropa belladonna/metabolismo , Estructura Molecular , Oxidorreductasas/química , Oxidorreductasas/aislamiento & purificación , Ácidos Fenilpirúvicos/química , Ácidos Fenilpirúvicos/aislamiento & purificación , Tropanos/química
4.
Eur J Pharmacol ; 694(1-3): 45-52, 2012 Nov 05.
Artículo en Inglés | MEDLINE | ID: mdl-22975264

RESUMEN

Tuberculosis is a serious threat to world-wide public health usually caused in humans by Mycobacterium tuberculosis (M. tuberculosis). It exclusively utilizes the methylerythritol phosphate (MEP) pathway for biosynthesis of isopentenyl diphosphate (IPP) and its isomer dimethylallyl diphosphate (DMAPP), the precursors of all isoprenoid compounds. The 4-diphosphocytidyl-2-C-methyl-D-erythritol synthase (IspD; EC 2.7.7.60) is the key enzyme of the MEP pathway. It is also of interest as a new chemotherapeutic target, as the enzyme is absent in mammals and ispD is an essential gene for growth. A high-throughput screening method was therefore developed to identify compounds that inhibit IspD. This process was applied to identify a lead compound, domiphen bromide (DMB), that may effectively inhibit IspD. The inhibitory action of DMB was confirmed by over-expressing or down-regulating IspD in Mycobacterium smegmatis (M. smegmatis), demonstrating that DMB inhibit M. smegmatis growth additionally through an IspD-independent pathway. This also led to higher levels of growth inhibition when combined with IspD knockdown. This novel IspD inhibitor was also reported to exhibit antimycobacterial activity in vitro, an effect that likely occurs as a result of perturbation of cell wall biosynthesis.


Asunto(s)
Inhibidores Enzimáticos/farmacología , Mycobacterium tuberculosis/enzimología , Oxidorreductasas/antagonistas & inhibidores , Compuestos de Amonio Cuaternario/farmacología , Evaluación Preclínica de Medicamentos , Farmacorresistencia Bacteriana/efectos de los fármacos , Ensayos Analíticos de Alto Rendimiento , Cinética , Mycobacterium smegmatis/efectos de los fármacos , Mycobacterium smegmatis/enzimología , Mycobacterium smegmatis/crecimiento & desarrollo , Mycobacterium tuberculosis/efectos de los fármacos , Oxidorreductasas/genética , Oxidorreductasas/aislamiento & purificación , Reproducibilidad de los Resultados
5.
Appl Environ Microbiol ; 78(1): 242-9, 2012 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-22020506

RESUMEN

Using enrichment culture, Rhizobium sp. strain GIN611 was isolated as having activity for deglycosylation of a ginsenoside, compound K (CK). The purified heterodimeric protein complex from Rhizobium sp. GIN611 consisted of two subunits with molecular masses of 63.5 kDa and 17.5 kDa. In the genome, the coding sequence for the small subunit was located right after the sequence for the large subunit, with one nucleotide overlapping. The large subunit showed CK oxidation activity, and the deglycosylation of compound K was performed via oxidation of ginsenoside glucose by glycoside oxidoreductase. Coexpression of the small subunit helped soluble expression of the large subunit in recombinant Escherichia coli. The purified large subunit also showed oxidation activity against other ginsenoside compounds, such as Rb1, Rb2, Rb3, Rc, F2, CK, Rh2, Re, F1, and the isoflavone daidzin, but at a much lower rate. When oxidized CK was extracted and incubated in phosphate buffer with or without enzyme, (S)-protopanaxadiol [PPD(S)] was detected in both cases, which suggests that deglycosylation of oxidized glucose is spontaneous.


Asunto(s)
Ginsenósidos/metabolismo , Oxidorreductasas/aislamiento & purificación , Panax , Extractos Vegetales/metabolismo , Rhizobium/enzimología , Sapogeninas/metabolismo , Secuencia de Bases , Cromatografía Líquida de Alta Presión , ADN Bacteriano/análisis , Electroforesis en Gel de Poliacrilamida , Ginsenósidos/química , Datos de Secuencia Molecular , Estructura Molecular , Oxidorreductasas/química , Oxidorreductasas/genética , Oxidorreductasas/metabolismo , Panax/microbiología , Extractos Vegetales/química , Reacción en Cadena de la Polimerasa , Proteínas Recombinantes/metabolismo , Sapogeninas/química , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
6.
Chemosphere ; 86(6): 572-7, 2012 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-22094050

RESUMEN

In this study we investigated the effect of uranium on the growth of the bacterium Thermus scotoductus strain SA-01 as well as the whole cell U(VI) reduction capabilities of the organism. Also, site-directed mutagenesis confirmed the identity of a protein capable of a possible alternative mechanism of U(VI) reduction. SA-01 can grow aerobically in up to 1.25 mM uranium and has the capability to reduce low levels of U(VI) in under 20 h. TEM analysis performed on cells exposed to uranium showed extracellular and membrane-bound accumulation of uranium. The reductase-like protein was surprisingly identified as a peptide ABC transporter, peptide-binding protein. This study showcases the concept of protein promiscuity, where this protein with a distinct function in situ can also have the unintended function of a reactant for the reduction of U(VI).


Asunto(s)
Transportadoras de Casetes de Unión a ATP/metabolismo , Proteínas Bacterianas/metabolismo , Contaminantes Ambientales/metabolismo , Thermus/metabolismo , Uranio/metabolismo , Transportadoras de Casetes de Unión a ATP/química , Transportadoras de Casetes de Unión a ATP/genética , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Biodegradación Ambiental , Transporte de Electrón , Contaminantes Ambientales/aislamiento & purificación , Contaminantes Ambientales/toxicidad , Modelos Moleculares , Mutación , Oxidorreductasas/aislamiento & purificación , Oxidorreductasas/metabolismo , Conformación Proteica , Thermus/citología , Thermus/efectos de los fármacos , Thermus/enzimología , Uranio/aislamiento & purificación , Uranio/toxicidad
7.
Mol Biol Rep ; 39(3): 2285-96, 2012 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-21643949

RESUMEN

Flavonols are produced by the desaturation of dihydroflavanols, which is catalyzed by flavonol synthase (FLS). FLS belongs to the 2-oxoglutarate iron-dependent oxygenase family. The full-length cDNA and genomic DNA sequences of the FLS gene (designated as GbFLS) were isolated from Ginkgo biloba. The full-length cDNA of GbFLS contained a 1023-bp open reading frame encoding a 340-amino-acid protein. The GbFLS genomic DNA had three exons and two introns. The deduced GbFLS protein showed high identities with other plant FLSs. The conserved amino acids (H-X-D) ligating ferrous iron and residues (R-X-S) participating in 2-oxoglutarate binding were found in GbFLS at similar positions like other FLSs. GbFLS was found to be expressed in all tested tissues including roots, stems, leaves, and fruits. Expression profiling analyses revealed that GbFLS expression was induced by all of the six tested abiotic stresses, namely, UV-B, abscisic acid, cold, sucrose, salicylic acid, and ethephon, consistent with the in silico analysis results of the promoter region. The recombinant protein was successfully expressed in the E. coli strain BL21 (DE3) with a pET-28a vector. The in vitro enzyme activity assay by high performance liquid chromatography indicated that recombinant GbFLS protein could catalyze the formation of dihydrokaempferol to kaempferol and the conversion of kaempferol from naringenin, suggesting that GbFLS is a bifunctional enzyme within the flavonol biosynthetic pathway.


Asunto(s)
Evolución Molecular , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Ginkgo biloba/enzimología , Oxidorreductasas/genética , Oxidorreductasas/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Ácido Abscísico/farmacología , Secuencia de Aminoácidos , Análisis de Varianza , Secuencia de Bases , Cromatografía Líquida de Alta Presión , Frío , Biología Computacional , ADN Complementario/genética , Flavonoides/metabolismo , Perfilación de la Expresión Génica , Regulación de la Expresión Génica de las Plantas/genética , Regulación de la Expresión Génica de las Plantas/efectos de la radiación , Quempferoles/metabolismo , Datos de Secuencia Molecular , Sistemas de Lectura Abierta/genética , Compuestos Organofosforados/farmacología , Oxidorreductasas/aislamiento & purificación , Proteínas de Plantas/aislamiento & purificación , Regiones Promotoras Genéticas/genética , Reacción en Cadena en Tiempo Real de la Polimerasa , Ácido Salicílico/farmacología , Plantones/enzimología , Análisis de Secuencia de ADN , Sacarosa/farmacología , Rayos Ultravioleta
8.
Proc Natl Acad Sci U S A ; 108(16): 6615-20, 2011 Apr 19.
Artículo en Inglés | MEDLINE | ID: mdl-21467222

RESUMEN

Polyphenol curcumin, a yellow pigment, derived from the rhizomes of a plant (Curcuma longa Linn) is a natural antioxidant exhibiting a variety of pharmacological activities and therapeutic properties. It has long been used as a traditional medicine and as a preservative and coloring agent in foods. Here, curcumin-converting microorganisms were isolated from human feces, the one exhibiting the highest activity being identified as Escherichia coli. We are thus unique in discovering that E. coli was able to act on curcumin. The curcumin-converting enzyme was purified from E. coli and characterized. The native enzyme had a molecular mass of about 82 kDa and consisted of two identical subunits. The enzyme has a narrow substrate spectrum, preferentially acting on curcumin. The microbial metabolism of curcumin by the purified enzyme was found to comprise a two-step reduction, curcumin being converted NADPH-dependently into an intermediate product, dihydrocurcumin, and then the end product, tetrahydrocurcumin. We named this enzyme "NADPH-dependent curcumin/dihydrocurcumin reductase" (CurA). The gene (curA) encoding this enzyme was also identified. A homology search with the BLAST program revealed that a unique enzyme involved in curcumin metabolism belongs to the medium-chain dehydrogenase/reductase superfamily.


Asunto(s)
Curcumina/metabolismo , Escherichia coli/enzimología , Escherichia coli/genética , Intestinos/microbiología , Oxidorreductasas/genética , Oxidorreductasas/metabolismo , Secuencia de Bases , Humanos , Datos de Secuencia Molecular , NADP/genética , NADP/metabolismo , Oxidorreductasas/química , Oxidorreductasas/aislamiento & purificación
9.
Antonie Van Leeuwenhoek ; 96(4): 527-35, 2009 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-19642009

RESUMEN

In previous studies, Mucor circinelloides YR-1 isolated from petroleum-contaminated soils grown in decane as sole carbon source, showed fatty alcohol oxidase (FAO) activities in either particulate or soluble fractions from a cell-free extract. One is associated to internal membranes (mFAO) and the other one is soluble (sFAO). Both activities appear to be located in the cells in specific compartments other than peroxisomes. Results suggested that mFAO could be located on the inner face of the membrane of these compartments, and sFAO could be in the lumen of the specific compartments. This study reports on the intracellular distribution of FAO activity and the purification of sFAOs and mFAO after several different procedures for release from the membranous fraction using the mixed membrane fraction (MMF) after cellular homogenization as enzymatic source. Results with the purified mFAO show, by molecular weight criteria, that the enzyme has only one type of subunit with molecular mass of 46 kDa, with two isoelectric point components: 6.0 and 6.3. We found that mFAO is strongly associated to the MMF, possibly in a transitory fashion. Using non-denaturating gels, we suggest that sFAO and mFAO have the same subunits in their native structures, and, due to their native molecular weight of approximately 350 kDa, each could be natively structured as an octameric complex.


Asunto(s)
Alcoholes Grasos/metabolismo , Mucor/química , Mucor/enzimología , Oxidorreductasas/análisis , Microbiología del Suelo , Membrana Celular/química , Electroforesis en Gel de Poliacrilamida/métodos , Immunoblotting , Membranas Intracelulares/química , Punto Isoeléctrico , Peso Molecular , Mucor/aislamiento & purificación , Oxidorreductasas/química , Oxidorreductasas/aislamiento & purificación , Petróleo , Multimerización de Proteína , Subunidades de Proteína , Contaminantes del Suelo
10.
Curr Microbiol ; 58(5): 493-8, 2009 May.
Artículo en Inglés | MEDLINE | ID: mdl-19189180

RESUMEN

A Pseudomonas sp. that may be useful in bioremediation projects was isolated from soil. The strain is of potential value because it reduces selenite to elemental red selenium and is unusual in that it was resistant to high concentrations of both selenate and selenite. Exposure of the strain to 50, 100, and 150 mM selenite reduced growth by 28, 57, and 66%, respectively, while no change in growth was observed when the strain was exposed to 64 mM selenate, the highest level tested. Cells of the strain removed 1.7 mM selenite from the culture fluid during a 7-day incubation. A selenite reductase with a molecular weight of ~115 kD was detected in cell-free extracts and a protein with a molecular weight of ~700 kD was detected that reduced both selenate and nitrate. The bacterial isolate is a strict aerobe, reducing selenite to elemental red selenium under aerobic conditions only. Pseudomonas sp. strain CA5 might be useful as an inoculum for bioreactors used to harvest selenium from selenite-containing groundwater. 16S rRNA gene sequence alignment and fatty acid analysis were used to identify the bacterium as a novel species of Pseudomonas related to P. argentinensis, P. flavescens, and P. straminea.


Asunto(s)
Pseudomonas/metabolismo , Selenio/metabolismo , Selenito de Sodio/metabolismo , Microbiología del Suelo , Aerobiosis , ADN Bacteriano/química , ADN Bacteriano/genética , Farmacorresistencia Bacteriana , Ácidos Grasos/análisis , Datos de Secuencia Molecular , Peso Molecular , Nitratos/metabolismo , Oxidación-Reducción , Oxidorreductasas/química , Oxidorreductasas/aislamiento & purificación , Oxidorreductasas/metabolismo , Pseudomonas/química , Pseudomonas/genética , Pseudomonas/aislamiento & purificación , ARN Ribosómico 16S/genética , Selenio/toxicidad , Selenito de Sodio/toxicidad
11.
Biosci Biotechnol Biochem ; 72(8): 1999-2004, 2008 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-18685206

RESUMEN

Debaryomyces vanrijiae MH201 produces formate oxidase (FOD) at estimated pI values by native isoelectric focusing of 5.1, 5.4, and 5.9. We cloned and expressed three formate oxidase cDNAs, FOD1, FOD2, and FDO3, of the yeast using Escherichia coli. The open reading frames of FOD1, FOD2, and FDO3 were 1,731 bp long, and encoded 576-amino acid polypeptides with molecular masses of 64,142, 63,794, and 63,836 Da respectively. Expression of FOD1, FOD2, and FOD3 resulted in the production of three isozymes, with pI values of 5.1, 5.9, and 5.9 respectively. Co-expression of FOD1 and FOD2 and of FOD1 and FOD3 resulted in the production of additional isozymes with pI values, of 5.4. The three amino acid sequences of FOD1, FOD2, and FOD3 contained a consensus motif of a flavin adenine dinucleotide binding site in their N-terminal parts and a glucose-methanol-choline oxidoreductase signature pattern, suggesting that formate oxidase ought to be classified in the glucose-methanol-choline oxidoreductase family.


Asunto(s)
Formiatos/metabolismo , Regulación Enzimológica de la Expresión Génica , Oxidorreductasas/metabolismo , Saccharomycetales/enzimología , Secuencia de Aminoácidos , Clonación Molecular , ADN Complementario/genética , Expresión Génica , Focalización Isoeléctrica , Datos de Secuencia Molecular , Oxidorreductasas/química , Oxidorreductasas/genética , Oxidorreductasas/aislamiento & purificación , Filogenia , Saccharomycetales/genética
12.
Bioprocess Biosyst Eng ; 31(6): 541-50, 2008 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-18193460

RESUMEN

Mate (Ilex paraguariensis) is an important natural product in the economic and cultural context of Brazil. Peroxidase and polyphenol oxidase have been responsible for quality deterioration and browning in mate. The objective of this work was to investigate a methodology of extraction and enzymatic activity determination of oxidases present in mate tea leaves and to evaluate the oxidases stability. The effects of raw-material mass, buffer molar concentration, Triton X-100 addition, extraction pH, pH activity measurement, polyvinylpyrrolidone K90 addition, and centrifugation time were evaluated by the experimental planning methodology. The storage of the oxidases along 150 days at low temperatures showed that no significant difference was found at -4 and -80 degrees C but significant difference was observed when compared to 4 degrees C. The results showed that higher activities of oxidases are obtained at similar conditions. The exposition to high-temperatures and the variation of the time of exposition affected the enzymatic activity significantly.


Asunto(s)
Oxidorreductasas/química , Té/enzimología , Brasil , Catecol Oxidasa/química , Técnicas de Química Analítica/métodos , Detergentes/farmacología , Concentración de Iones de Hidrógeno , Modelos Estadísticos , Octoxinol/farmacología , Oxidorreductasas/aislamiento & purificación , Peroxidasas/química , Extractos Vegetales/farmacología , Povidona/química , Análisis de Regresión , Té/química , Té/metabolismo , Temperatura , Factores de Tiempo
13.
Bioresour Technol ; 99(5): 946-53, 2008 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-17451945

RESUMEN

A laboratory experiment was conducted to determine the effects of different organic wastes such as wheat straw (WS), tea production waste (TEW), tobacco production waste (TOW), cow manure (CM) and hazelnut husk (HH) on dehydrogenase activity (DHA) in casts of earthworm Lumbricus terrestris and surrounding soil using 5% (dry weight) application rates associated with increasing doses of Zn (0, 50, 100, 250, 500 and 1000 microg g(-1)). Twenty one days after treatment of Zn and organic wastes, the DHA analyses were carried out on collected casts and soil samples. In general, all organic waste treatments influenced the DHA, the contents of organic C, N and available Zn in earthworm L. terrestris casts and the surrounding soil in comparison with the control. DHA in casts exceeded that in the surrounding soil without Zn additions. After Zn application of 50 microg Zn g(-1) in all organic waste treatments and the control, the DHA level in casts and surrounding soil increased significantly. It decreased by application rates of 100, 250, 500 and 1000 microg Zn g(-1) consecutively in all organic waste applications. The addition of wastes with low C/N ratio and high Zn content (TEW, TOW, CM) inhibited the DHA in both cast and surrounding soil.


Asunto(s)
Heces/enzimología , Oligoquetos/fisiología , Oxidorreductasas/aislamiento & purificación , Tallos de la Planta/química , Suelo/análisis , Zinc/química , Animales , Camellia sinensis , Corylus , Eliminación de Residuos , Nicotiana , Triticum
14.
Protein Expr Purif ; 55(2): 287-92, 2007 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-17629496

RESUMEN

Flavonols, a class of bioactive polyphenols present in plants, are the products of flavonol desaturation catalyzed by flavonol synthase (FLS). We cloned the cDNA coding for the enzyme FLS from Camellia sinensis (CsFLS) by end-to-end PCR followed by 5'- and 3'-RACE. The putative CsFLS had 333 amino acid residues, displayed identities to the FLSs of Arabidopsis and Ginkgo of 53% and 52.5%, respectively, and contained several conserved elements found in the 2-oxoglutarate-Fe(II)-dioxygenase superfamily. The cDNA of CsFLS was subcloned into pET28a(+) and introduced into Escherichia coli (BL21-CodonPlus-RIL). Induction with 0.1mM IPTG at low temperature (20 degrees C) led to higher amounts of CsFLS in the soluble fraction than induction at 30 degrees C. The enzyme aggregated into inclusion bodies could be rescued by denaturation with 6M urea and purification with a His. Bind purification kit. The purified protein was desalted by Amicon Ultra-15 centrifugal filter unit, and the His-tag was removed with thrombin. The finally purified protein was assayed with dihydroquercetin as substrate and the products were analyzed by HPLC. The addition of FeSO(4) to the buffers used in the CsFLS purification significantly increased the recovery of active enzyme. The CsFLS obtained in this study was found to have higher specific activity and lower K(m) than previously reported FLSs.


Asunto(s)
Camellia sinensis/enzimología , Escherichia coli/genética , Oxidorreductasas/genética , Proteínas de Plantas/genética , Secuencia de Aminoácidos , Secuencia de Bases , Cromatografía Líquida de Alta Presión , Cartilla de ADN , ADN Complementario , Electroforesis en Gel de Poliacrilamida , Datos de Secuencia Molecular , Oxidorreductasas/química , Oxidorreductasas/aislamiento & purificación , Proteínas de Plantas/química , Proteínas de Plantas/aislamiento & purificación , Homología de Secuencia de Aminoácido
15.
Plant Mol Biol ; 56(3): 381-95, 2004 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-15604751

RESUMEN

We identified 77 EST clones encoding germin-like proteins (GLPs) from a moss, Physcomitrella patens in a database search. These Physcomitrella GLPs ( PpGLP s) were separated into seven groups based on DNA sequence homology. Phylogenetic analysis showed that these groups were divided into two novel clades clearly distinguishable from higher plant germins and GLPs, named bryophyte subfamilies 1 and 2. PpGLPs belonging to bryophyte subfamilies 1 lacked two cysteines at the conserved positions observed in higher plant germins or GLPs. PpGLPs belonging to bryophyte subfamily 2 contained two cysteines as observed in higher plant germins and GLPs. In bryophyte subfamily 1, 12 amino acids, in which one of two cysteines is included, were deleted between boxes A and B. Further, we determined the genomic structure of all of seven PpGLP genes. The sequences of PpGLP s of bryophyte subfamily 1 contained one or two introns, whereas those of bryophyte subfamily 2 contained no introns. Other GLPs from bryophytes, a liverwort GLP from Marchantia polymorpha , and two moss GLPs from Barbula unguiculata and Ceratodon purpureus also fell into bryophyte subfamily 1 and bryophyte subfamily 2, respectively. No higher plant germins and GLPs were grouped into the bryophyte subfamilies 1 and 2 by our analysis. Moreover, we revealed that PpGLP6 had manganese-containing extracellular superoxide dismutase activity. These results indicated that bryophyte possess characteristic GLPs, which phylogenetically are clearly distinguishable from higher plant GLPs.


Asunto(s)
Bryopsida/genética , Glicoproteínas/genética , Familia de Multigenes/genética , Oxidorreductasas/genética , Filogenia , Proteínas de Plantas/genética , Secuencia de Aminoácidos , Southern Blotting , Clonación Molecular , ADN Complementario/química , ADN Complementario/genética , ADN de Plantas/química , ADN de Plantas/genética , Electroforesis en Gel de Poliacrilamida , Etiquetas de Secuencia Expresada , Glicoproteínas/aislamiento & purificación , Glicoproteínas/metabolismo , Datos de Secuencia Molecular , Oxidorreductasas/aislamiento & purificación , Oxidorreductasas/metabolismo , Proteínas de Plantas/aislamiento & purificación , Proteínas de Plantas/metabolismo , Alineación de Secuencia , Análisis de Secuencia de ADN , Homología de Secuencia de Aminoácido , Superóxido Dismutasa/aislamiento & purificación , Superóxido Dismutasa/metabolismo
16.
Plant Physiol ; 128(4): 1200-11, 2002 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-11950969

RESUMEN

Besides abundant oleosin, three minor proteins, Sop 1, 2, and 3, are present in sesame (Sesamum indicum) oil bodies. The gene encoding Sop1, named caleosin for its calcium-binding capacity, has recently been cloned. In this study, Sop2 gene was obtained by immunoscreening, and it was subsequently confirmed by amino acid partial sequencing and immunological recognition of its overexpressed protein in Escherichia coli. Immunological cross recognition implies that Sop2 exists in seed oil bodies of diverse species. Along with oleosin and caleosin genes, Sop2 gene was transcribed in maturing seeds where oil bodies are actively assembled. Sequence analysis reveals that Sop2, tentatively named steroleosin, possesses a hydrophobic anchoring segment preceding a soluble domain homologous to sterol-binding dehydrogenases/reductases involved in signal transduction in diverse organisms. Three-dimensional structure of the soluble domain was predicted via homology modeling. The structure forms a seven-stranded parallel beta-sheet with the active site, S-(12X)-Y-(3X)-K, between an NADPH and a sterol-binding subdomain. Sterol-coupling dehydrogenase activity was demonstrated in the overexpressed soluble domain of steroleosin as well as in purified oil bodies. Southern hybridization suggests that one steroleosin gene and certain homologous genes may be present in the sesame genome. Comparably, eight hypothetical steroleosin-like proteins are present in the Arabidopsis genome with a conserved NADPH-binding subdomain, but a divergent sterol-binding subdomain. It is indicated that steroleosin-like proteins may represent a class of dehydrogenases/reductases that are involved in plant signal transduction regulated by various sterols.


Asunto(s)
Oxidorreductasas/genética , Pedaliaceae/genética , Proteínas de Plantas/genética , Semillas/genética , Secuencia de Aminoácidos , Southern Blotting , Western Blotting , Proteínas de Unión al Calcio/genética , Proteínas de Unión al Calcio/metabolismo , Clonación Molecular , Escherichia coli/genética , Regulación de la Expresión Génica de las Plantas , Datos de Secuencia Molecular , Oxidorreductasas/aislamiento & purificación , Oxidorreductasas/metabolismo , Pedaliaceae/metabolismo , Fitosteroles/metabolismo , Proteínas de Plantas/aislamiento & purificación , Proteínas de Plantas/metabolismo , Unión Proteica , Proteínas Recombinantes/metabolismo , Semillas/metabolismo , Alineación de Secuencia , Homología de Secuencia de Aminoácido , Aceite de Sésamo/metabolismo
17.
Eur J Biochem ; 268(5): 1332-9, 2001 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-11231285

RESUMEN

Between the different types of Acyl-CoA dehydrogenases (ACADs), those specific for branched chain acyl-CoA derivatives are involved in the catabolism of amino acids. In mammals, isovaleryl-CoA dehydrogenase (IVD), an enzyme of the leucine catabolic pathway, is a mitochondrial protein, as other acyl-CoA dehydrogenases involved in fatty acid beta-oxidation. In plants, fatty acid beta-oxidation takes place mainly in peroxisomes, and the cellular location of the enzymes involved in the catabolism of branched-chain amino acids had not been definitely assigned. Here, we describe that highly purified potato mitochondria have important IVD activity. The enzyme was partially purified and cDNAs from two different genes were obtained. The partially purified enzyme has enzymatic constant values with respect to isovaleryl-CoA comparable to those of the mammalian enzyme. It is not active towards straight-chain acyl-CoA substrates tested, but significant activity was also found with isobutyryl-CoA, implying an additional role of the enzyme in the catabolism of valine. The present study confirms recent reports that in plants IVD activity resides in mitochondria and opens the way to a more detailed study of amino-acid catabolism in plant development.


Asunto(s)
Arabidopsis/enzimología , Arabidopsis/genética , Mitocondrias/enzimología , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH , Oxidorreductasas/aislamiento & purificación , Oxidorreductasas/metabolismo , Solanum tuberosum/enzimología , Solanum tuberosum/genética , Acilcoenzima A/metabolismo , Secuencia de Aminoácidos , Animales , Cromatografía en Gel , Cromatografía por Intercambio Iónico , Clonación Molecular , Etiquetas de Secuencia Expresada , Genes de Plantas/genética , Isovaleril-CoA Deshidrogenasa , Cinética , Datos de Secuencia Molecular , Peso Molecular , Familia de Multigenes/genética , Oxidorreductasas/química , Oxidorreductasas/genética , ARN Mensajero/análisis , ARN Mensajero/genética , Alineación de Secuencia , Especificidad por Sustrato
18.
J Exp Bot ; 51(345): 713-9, 2000 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-10938863

RESUMEN

A complex containing trypsin inhibitor (TI) activity was extracted with 0.1 M TRIS buffer (pH 7.9) from trypsin-treated mitochondria of etiolated mung bean seedlings, and further purified with a Superdex 200 FPLC column. This partially purified complex with an M(r) about 820 kDa exhibited additional dehydroascorbate (DHA) reductase activity with specific activities of 0.21, 1.53 and 1.54 mumol ascorbate formed min-1 mg-1 protein at pH 6.0, 6.5 and 7.0, respectively, when glutathione was added. Much lower DHA reductase activity (0.013 and 0.026 mumol ascorbate formed min-1 mg-1 protein at pH 6.5 and 7.0, respectively) was found when glutathione was omitted. The isolated complex gave positive results when it was tested by TI activity staining after SDS-PAGE, and could be recognized by a polyclonal antibody which was raised against 38 kDa sweet potato Kunitz-type TI, one of the root storage proteins of sweet potato. The possible physiological functions of this complex with both TI and DHA reductase activities were discussed.


Asunto(s)
Ácido Deshidroascórbico/metabolismo , Fabaceae/química , Mitocondrias/química , Oxidorreductasas/aislamiento & purificación , Proteínas de Plantas/aislamiento & purificación , Plantas Medicinales , Cromatografía , Electroforesis en Gel de Poliacrilamida , Fabaceae/metabolismo , Fabaceae/ultraestructura , Mitocondrias/enzimología , Inhibidores de Tripsina , alfa-Amilasas/antagonistas & inhibidores
19.
Tree Physiol ; 20(15): 1039-47, 2000 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-11305458

RESUMEN

In a diverse taxonomic range of tree species, including representative species of ancient families of angiosperms (Magnolia x soulangiana Soul.-Bod.) and gymnosperms (Ginkgo biloba L.), oxidase activity was associated with cell walls of developing xylem and was enriched in extracts of cell wall-associated glycoproteins. In all species where oxidase activity was detected histochemically, it was expressed in cell walls of lignifying, differentiating xylem cells and was absent from old wood, cambium and phloem, suggesting that oxidases have a conservative role in lignification of tree xylem. An oxidase from the developing xylem of Picea sitchensis (Bong) Carr. (Sitka spruce) was partially purified by a combination of lectin affinity and immobilized metal ion affinity chromatography. A portion of the total oxidase activity had high affinity for immobilized zinc ions and this feature allowed it to be separated from the bulk of oxidase activity. Two polypeptides that could have been responsible for the bound oxidase activity were enriched by this procedure. The smaller polypeptide of Mr approximately 73 kDa yielded an N-terminal amino-acid sequence that was homologous to laccase-like polyphenol oxidases (E.C. 1.10.3.2) from loblolly pine (Pinus taeda L.), poplar (Populus euramericana (Dode) Guinier) and Arabidopsis. The larger polypeptide (Mr approximately 77 kDa) yielded an N-terminal amino-acid sequence that was homologous with a range of plant subtilisin-like serine proteinases. The roles of oxidase and proteinase activities in developing xylem are discussed.


Asunto(s)
Oxidorreductasas/fisiología , Árboles/enzimología , Cycadopsida/enzimología , Ginkgo biloba/enzimología , Lacasa , Lignina/fisiología , Magnoliopsida/enzimología , Oxidorreductasas/aislamiento & purificación , Plantas Medicinales , Árboles/anatomía & histología
20.
J Allergy Clin Immunol ; 104(5): 991-9, 1999 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-10550744

RESUMEN

BACKGROUND: Birch pollen is a major cause of pollinosis and is responsible for cross-reactive oral allergies to fruits, nuts, and vegetables. The major allergen, Bet v 1, has been extensively characterized, and 3 minor allergens, Bet v 2, Bet v 3, and Bet v 4, have been cloned and sequenced. Recently, another birch pollen protein with an apparent mass of 35 kd was described as a new IgE-binding protein in birch pollen with cross-reacting homologues in plant foods. OBJECTIVE: The aim of this study was to determine the primary structure of the 35-kd birch pollen allergen and to investigate its immunologic properties. METHODS: On the basis of a known complementary DNA fragment, a PCR strategy was applied to obtain the full-length nucleotide sequence of the coding region. The protein was expressed as His-Tag fusion protein in Escherichia coli and purified by Ni-chelate affinity chromatography. Nonfusion protein was obtained by cyanogen bromide treatment of the fusion protein. IgE-binding characteristics and potential allergenicity were investigated by immunoblot, immunoblot inhibition analysis, rat basophil leukemia-cell mediator release assay, and basophil histamine release and compared with those of natural (n) Bet v 5, recombinant (r)Bet v 1, and rBet v 2. RESULTS: Recombinant Bet v 5 has a mass of 33 kd, an isoelectric point of 9.0, and sequence identity of 60% to 80% to isoflavone reductase homologue proteins from various plants. On immunoblots the recombinant Bet v 5 bound IgE from 9 (32%) of 28 sera from patients allergic to birch pollen with a CAP class of at least 3; Bet v 1 was detected by 89% of these patients. IgE immunoblot and inhibition experiments showed that nBet v 5 and rBet v 5 shared identical epitopes. A rabbit antiserum raised against pea isoflavone reductase and patients' IgE reacted with Bet v 5 and proteins of similar size in several vegetable foods, including exotic fruits. A similar reaction pattern was obtained with 2 Bet v 5-specific mAbs. Furthermore, Bet v 5 triggered a dose-dependent mediator release from rat basophil leukemia 2H3 cells passively sensitized with murine anti-birch pollen IgE and from basophils of a Bet v 5-reactive subject with birch pollen allergy. In contrast, no mediator release could be induced from basophils of a subject who was monosensitized to Bet v 1. CONCLUSIONS: This 33-kd protein, designated as Bet v 5, is a new minor allergen in birch pollen and may be responsible for pollen-related oral allergy to specific foods in a minority of patients with birch pollen allergy. Amino acid sequence comparison and immunoreactivity to anti-isoflavone reductase serum indicate that Bet v 5 is related to isoflavone reductase, a protein family that is involved in plant defense reactions.


Asunto(s)
Alérgenos/inmunología , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH , Oxidorreductasas , Proteínas de Plantas/inmunología , Polen , Árboles , Alérgenos/clasificación , Alérgenos/genética , Alérgenos/aislamiento & purificación , Secuencia de Aminoácidos , Animales , Anticuerpos Monoclonales/inmunología , Antígenos de Plantas , Secuencia de Bases , Clonación Molecular , Reacciones Cruzadas , ADN Complementario , Frutas/inmunología , Expresión Génica , Humanos , Immunoblotting , Inmunoglobulina E/sangre , Inmunoglobulina E/inmunología , Datos de Secuencia Molecular , Oxidorreductasas/clasificación , Oxidorreductasas/genética , Oxidorreductasas/inmunología , Oxidorreductasas/aislamiento & purificación , Extractos Vegetales/inmunología , Proteínas de Plantas/clasificación , Proteínas de Plantas/genética , Proteínas de Plantas/aislamiento & purificación , Ratas , Análisis de Secuencia de ADN
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