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1.
Elife ; 92020 05 21.
Artículo en Inglés | MEDLINE | ID: mdl-32436842

RESUMEN

Antennae are often considered to be the nostrils of insects. Here, we sequenced the transcriptome of the pheromone gland-ovipositor complex of Helicoverpa assulta and discovered that an odorant receptor (OR) gene, HassOR31, had much higher expression in the ovipositor than in antennae or other tissues. To determine whether the ovipositor was involved in odorant detection, we co-expressed HassOR31 and its co-receptor, HassORco, in a Xenopus oocyte model system, and demonstrated that the OR was responsive to 12 plant odorants, especially Z-3-hexenyl butyrate. These odorants elicited electrophysiological responses of some sensilla in the ovipositor, and HassOR31 and HassORco were co-expressed within ovipositor sensilla. Two oviposition preference experiments showed that female moths lacking antennae still preferentially selected oviposition sites containing plant volatiles. We suggest that the expression of HassOR31 in the ovipositor of H. assulta helps females to determine precise egg-laying sites in host plants.


When most insects reproduce they lay eggs that hatch into juveniles known as larvae. To provide good sources of food for the larvae, the adult insects have to carefully select where to lay the eggs. Host plants produce specific sets of chemicals known as odorants that the adult insects are able to smell using proteins called odorant receptors. It is generally thought that odorant receptors in the antennae on the head are responsible for guiding adult insects to good egg-laying sites. However, recent studies have reported that odorant receptors are also present in the egg-laying organs of several different species of moth. It remains unclear what role these odorant receptors may play in egg-laying. The oriental tobacco budworm (Helicoverpa assulta) is considered a serious pest in agriculture. The adult moths lay their eggs on a narrow range of plants in the nightshade family including tobacco and hot pepper. Li et al. have now investigated the odorant receptors of H. assulta and found that one gene for an odorant receptor called HassOR31 was expressed much more in the egg-laying organs of the moths than in the antennae. Further experiments showed that this receptor was tuned to respond to 12 odorants that also stimulated responses in the egg-laying organ of H. assulta. Together these findings suggest that this odorant receptor in the egg-laying organ helps the moths find suitable host plants to lay their eggs on. The work of Li et al. may help us understand how H. assulta evolved to lay its eggs on specific members of the nightshade family and lead to new methods of controlling this pest. An insect's sense of smell guides many other behaviors including finding food, mates and avoiding enemies. Therefore, these findings may inspire researchers to investigate whether odorant receptors in the antennae or other organs guide these behaviors.


Asunto(s)
Mariposas Nocturnas/anatomía & histología , Mariposas Nocturnas/fisiología , Oviposición , Receptores Odorantes/metabolismo , Solanum/química , Transcriptoma , Animales , Antenas de Artrópodos/metabolismo , Femenino , Expresión Génica , Interacciones Huésped-Patógeno , Mariposas Nocturnas/genética , Odorantes , Aceites Volátiles/metabolismo , Especificidad de Órganos , Óvulo/fisiología , Feromonas/genética , Feromonas/metabolismo , Aceites de Plantas/metabolismo , Receptores Odorantes/genética , Reproducción , Xenopus/genética , Xenopus/fisiología
2.
Genesis ; 55(1-2)2017 01.
Artículo en Inglés | MEDLINE | ID: mdl-28095616

RESUMEN

Model animals are crucial to biomedical research. Among the commonly used model animals, the amphibian, Xenopus, has had tremendous impact because of its unique experimental advantages, cost effectiveness, and close evolutionary relationship with mammals as a tetrapod. Over the past 50 years, the use of Xenopus has made possible many fundamental contributions to biomedicine, and it is a cornerstone of research in cell biology, developmental biology, evolutionary biology, immunology, molecular biology, neurobiology, and physiology. The prospects for Xenopus as an experimental system are excellent: Xenopus is uniquely well-suited for many contemporary approaches used to study fundamental biological and disease mechanisms. Moreover, recent advances in high throughput DNA sequencing, genome editing, proteomics, and pharmacological screening are easily applicable in Xenopus, enabling rapid functional genomics and human disease modeling at a systems level.


Asunto(s)
Discapacidades del Desarrollo/genética , Modelos Animales de Enfermedad , Evaluación Preclínica de Medicamentos , Xenopus/genética , Animales , Discapacidades del Desarrollo/fisiopatología , Edición Génica , Genómica , Humanos , Mamíferos , Proteómica
3.
Semin Cell Dev Biol ; 51: 117-24, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26851624

RESUMEN

Modern sequencing technology is revolutionizing our knowledge of inherited kidney disease. However, the molecular role of genes affected by the rapidly rising number of identified mutations is lagging behind. Xenopus is a highly useful, but underutilized model organism with unique properties excellently suited to decipher the molecular mechanisms of kidney development and disease. The embryonic kidney (pronephros) can be manipulated on only one side of the animal and its formation observed directly through the translucent skin. The moderate evolutionary distance between Xenopus and humans is a huge advantage for studying basic principles of kidney development, but still allows us to analyze the function of disease related genes. Optogenetic manipulations and genome editing by CRISPR/Cas are exciting additions to the toolbox for disease modelling and will facilitate the use of Xenopus in translational research. Therefore, the future of Xenopus in kidney research is bright.


Asunto(s)
Modelos Animales de Enfermedad , Enfermedades Renales/genética , Riñón/embriología , Xenopus/genética , Animales , Evaluación Preclínica de Medicamentos , Humanos , Riñón/patología , Riñón/fisiopatología , Enfermedades Renales/tratamiento farmacológico , Mutación , Regeneración , Proteínas de Xenopus/genética
4.
Dev Biol ; 373(1): 39-52, 2013 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-23064029

RESUMEN

The Dmrt (doublesex and mab-3 related transcription factor) genes encode a large family of evolutionarily conserved transcription factors whose function in sex specific differentiation has been well studied in all animal lineages. In vertebrates, their function is not restricted to the developing gonads. For example, Xenopus Dmrt4 is essential for neurogenesis in the olfactory system. Here we have isolated and characterized Xenopus Dmrt5 and found that it is coexpressed with Dmrt4 in the developing olfactory placodes. As Dmrt4, Dmrt5 is positively regulated in the ectoderm by neural inducers and negatively by proneural factors. Both Dmrt5 and Dmrt4 genes are also activated by the combined action of the transcription factor Otx2, broadly transcribed in the head ectoderm and of Notch signaling, activated in the anterior neural ridge. As for Dmrt4, knockdown of Dmrt5 impairs neurogenesis in the embryonic olfactory system and in neuralized animal caps. Conversely, its overexpression promotes neuronal differentiation in animal caps, a property that requires the conserved C-terminal DMA and DMB domains. We also found that the sea anenome Dmrt4/5 related gene NvDmrtb also induces neurogenesis in Xenopus animal caps and that conversely, its knockdown in Nematostella reduces elav-1 positive neurons. Together, our data identify Dmrt5 as a novel important regulator of neurogenesis whose function overlaps with that of Dmrt4 during Xenopus olfactory system development. They also suggest that Dmrt may have had a role in neurogenesis in the last common ancestor of cnidarians and bilaterians.


Asunto(s)
Neurogénesis/fisiología , Mucosa Olfatoria/embriología , Factores de Transcripción/metabolismo , Proteínas de Xenopus/metabolismo , Xenopus/embriología , Animales , Células COS , Chlorocebus aethiops , Cartilla de ADN/genética , ADN Complementario/genética , Ensayo de Cambio de Movilidad Electroforética , Técnicas de Silenciamiento del Gen , Etiquetado Corte-Fin in Situ , Factores de Transcripción Otx/metabolismo , Plásmidos/genética , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Anémonas de Mar/genética , Especificidad de la Especie , Factores de Transcripción/genética , Factores de Transcripción/fisiología , Xenopus/genética , Proteínas de Xenopus/genética , Proteínas de Xenopus/fisiología
5.
Methods Mol Biol ; 917: 155-66, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22956087

RESUMEN

Chemical genetics uses small molecules to modulate protein function and has the potential to perturb any biochemical event in a complex cellular context. The application of chemical genetics to dissect biological processes has become an attractive alternative to mutagenesis screens due to its technical simplicity, inexpensive reagents, and low-startup costs. Xenopus embryos are particularly amenable to whole organism chemical genetic screens. Here we describe the basic protocols we have developed to screen small compound libraries on Xenopus laevis embryos. We score embryos either by observing phenotypic changes in the whole tadpole or by changes in gene expression pattern using automated wholemount in situ hybridization.


Asunto(s)
Evaluación Preclínica de Medicamentos/métodos , Embrión no Mamífero/efectos de los fármacos , Xenopus/genética , Crianza de Animales Domésticos , Animales , Embrión no Mamífero/citología , Embrión no Mamífero/fisiología , Femenino , Fertilización In Vitro , Regulación de la Expresión Génica/efectos de los fármacos , Ensayos Analíticos de Alto Rendimiento/métodos , Larva/efectos de los fármacos , Masculino , Fenotipo , Pigmentación/efectos de los fármacos , Bibliotecas de Moléculas Pequeñas
6.
Plant Physiol ; 160(1): 498-510, 2012 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-22773759

RESUMEN

The family of plant membrane transporters named HKT (for high-affinity K(+) transporters) can be subdivided into subfamilies 1 and 2, which, respectively, comprise Na(+)-selective transporters and transporters able to function as Na(+)-K(+) symporters, at least when expressed in yeast (Saccharomyces cerevisiae) or Xenopus oocytes. Surprisingly, a subfamily 2 member from rice (Oryza sativa), OsHKT2;4, has been proposed to form cation/K(+) channels or transporters permeable to Ca(2+) when expressed in Xenopus oocytes. Here, OsHKT2;4 functional properties were reassessed in Xenopus oocytes. A Ca(2+) permeability through OsHKT2;4 was not detected, even at very low external K(+) concentration, as shown by highly negative OsHKT2;4 zero-current potential in high Ca(2+) conditions and lack of sensitivity of OsHKT2;4 zero-current potential and conductance to external Ca(2+). The Ca(2+) permeability previously attributed to OsHKT2;4 probably resulted from activation of an endogenous oocyte conductance. OsHKT2;4 displayed a high permeability to K(+) compared with that to Na(+) (permeability sequence: K(+) > Rb(+) ≈ Cs(+) > Na(+) ≈ Li(+) ≈ NH(4)(+)). Examination of OsHKT2;4 current sensitivity to external pH suggested that H(+) is not significantly permeant through OsHKT2;4 in most physiological ionic conditions. Further analyses in media containing both Na(+) and K(+) indicated that OsHKT2;4 functions as K(+)-selective transporter at low external Na(+), but transports also Na(+) at high (>10 mm) Na(+) concentrations. These data identify OsHKT2;4 as a new functional type in the K(+) and Na(+)-permeable HKT transporter subfamily. Furthermore, the high permeability to K(+) in OsHKT2;4 supports the hypothesis that this system is dedicated to K(+) transport in the plant.


Asunto(s)
Calcio/metabolismo , Proteínas de Transporte de Catión/metabolismo , Oryza/metabolismo , Proteínas de Plantas/metabolismo , Potasio/metabolismo , Animales , Secuencia de Bases , Transporte Biológico , Canales de Calcio/metabolismo , Proteínas de Transporte de Catión/genética , Permeabilidad de la Membrana Celular , ADN Complementario/genética , ADN Complementario/metabolismo , Concentración de Iones de Hidrógeno , Magnesio/metabolismo , Datos de Secuencia Molecular , Oocitos/metabolismo , Técnicas de Placa-Clamp/métodos , Proteínas de Plantas/genética , Canales de Potasio/metabolismo , Canales de Sodio/genética , Canales de Sodio/metabolismo , Especificidad de la Especie , Xenopus/genética , Xenopus/metabolismo
7.
Genesis ; 50(3): 207-18, 2012 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-22344814

RESUMEN

Chemical genetics, or chemical biology, has become an increasingly powerful method for studying biological processes. The main objective of chemical genetics is the identification and use of small molecules that act directly on proteins, allowing rapid and reversible control of activity. These compounds are extremely powerful tools for researchers, particularly in biological systems that are not amenable to genetic methods. In addition, identification of small molecule interactions is an important step in the drug discovery process. Increasingly, the African frog Xenopus is being used for chemical genetic approaches. Here, we highlight the advantages of Xenopus as a first-line in vivo model for chemical screening as well as for testing reverse engineering approaches.


Asunto(s)
Evaluación Preclínica de Medicamentos , Xenopus/genética , Animales , Regulación de la Expresión Génica/efectos de los fármacos , Ensayos Analíticos de Alto Rendimiento , Preparaciones Farmacéuticas , Bibliotecas de Moléculas Pequeñas/farmacología , Xenopus/metabolismo
8.
Exp Hematol ; 39(7): 784-94, 2011 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-21627978

RESUMEN

OBJECTIVE: Most patients with erythropoietic protoporphyria have deficient ferrochelatase (FECH) activity due to changes in FECH DNA. We evaluated seven patients with erythropoietic protoporphyria phenotype in whom abnormalities of FECH DNA were not found by conventional analysis. The major focus was mitoferrin-1 (MFRN1), the mitochondrial transporter of Fe used for heme formation by FECH and for 2Fe2S cluster synthesis, which is critical to FECH activity/stability. MATERIALS AND METHODS: Four patients had a deletion in ALAS2 that causes enzyme gain-of-function, resulting in increased formation of protoporphyrin; one had a heterozygous major deletion in FECH DNA. All had an abnormal transcript of MFRN1 in messenger RNA extracted from blood leukocytes and/or liver tissue. The abnormal transcript contained an insert of intron 2 that had a stop codon. The consequences of abnormal MFRN1 expression were examined using zebrafish and yeast MFRN-deficient strains and cultured lymphoblasts from the patients. RESULTS: Abnormal human MFRN1 complementary DNA showed loss-of-function in zebrafish and yeast mutants, whereas normal human MFRN1 complementary DNA rescued both. Using cultured lymphoblasts, quantitative reverse transcription polymerase chain reaction showed increased formation of abnormal transcript that was accompanied by decreased formation of normal transcript and reduced FECH activity in patients compared to normal lines. A positive correlation coefficient (0.75) was found between FECH activity and normal MFRN1 messenger RNA in lymphoblasts. However, no obvious cause for increased formation of abnormal transcript was identified in MFRN1 exons and splice junctions. CONCLUSIONS: Abnormal MFRN1 expression can contribute to erythropoietic protoporphyria phenotype in some patients, probably by causing a reduction in FECH activity.


Asunto(s)
Proteínas de Transporte de Catión/genética , Ferroquelatasa/genética , Expresión Génica , Proteínas Mitocondriales/genética , Protoporfiria Eritropoyética/genética , 5-Aminolevulinato Sintetasa/genética , 5-Aminolevulinato Sintetasa/metabolismo , Adolescente , Adulto , Anciano , Animales , Secuencia de Bases , Células COS , Proteínas de Transporte de Catión/metabolismo , Niño , Chlorocebus aethiops , Embrión no Mamífero/embriología , Embrión no Mamífero/metabolismo , Femenino , Ferroquelatasa/metabolismo , Prueba de Complementación Genética , Humanos , Células K562 , Masculino , Persona de Mediana Edad , Proteínas Mitocondriales/metabolismo , Datos de Secuencia Molecular , Mutación , Protoporfiria Eritropoyética/metabolismo , Protoporfiria Eritropoyética/patología , ARN Mensajero/genética , ARN Mensajero/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Xenopus/embriología , Xenopus/genética , Levaduras/genética , Levaduras/crecimiento & desarrollo , Adulto Joven
9.
J Nutr ; 140(5): 893-900, 2010 May.
Artículo en Inglés | MEDLINE | ID: mdl-20220205

RESUMEN

Atlantic salmon (Salmo salar L.) is one of the most economically important cultured fish and also a key model species in fish nutrition. During digestion, dietary proteins are enzymatically cleaved and a fraction of degradation products in the form of di- and tripeptides translocates from the intestinal lumen into the enterocyte via the Peptide Transporter 1 (PepT1). With this in mind, a full-length cDNA encoding the Atlantic salmon PepT1 (asPepT1) was cloned and functionally characterized. When overexpressed in Xenopus laevis oocytes, asPepT1 operated as a low-affinity/high-capacity transport system, and its maximal transport activity slightly increased as external proton concentration decreased (varying extracellular pH from 6.5 to 8.5). A total of 19 tested di- and tripeptides, some with acknowledged bioactive properties, some containing lysine, which is conditionally growth limiting in fish, were identified as well transported substrates, with affinities ranging between approximately 0.5 and approximately 1.5 mmol/L. Analysis of body tissue distribution showed the highest levels of asPepT1 mRNA in the digestive tract. In particular, asPepT1 mRNA was present in all segments after the stomach, with higher levels in the pyloric caeca and midgut region and lower levels in the hindgut. Depriving salmon of food for 6 d resulted in a approximately 70% reduction of intestinal PepT1 mRNA levels. asPepT1 will allow systematic in vitro analysis of transport of selected di- and tripeptides that may be generated in Atlantic salmon intestine during gastrointestinal transit. Also, asPepT1 will be useful as a marker to estimate protein absorption function along the intestine under various physiological and pathological conditions.


Asunto(s)
Proteínas en la Dieta/farmacocinética , Expresión Génica , Lisina/farmacocinética , Oligopéptidos/farmacocinética , Salmo salar/metabolismo , Simportadores/genética , Animales , Secuencia de Bases , Transporte Biológico/genética , Clonación Molecular , ADN Complementario/análisis , Digestión , Concentración de Iones de Hidrógeno , Absorción Intestinal , Datos de Secuencia Molecular , Oocitos/metabolismo , Transportador de Péptidos 1 , ARN Mensajero/metabolismo , Salmo salar/genética , Simportadores/metabolismo , Distribución Tisular , Xenopus/genética , Xenopus/metabolismo
10.
Dev Biol ; 329(2): 258-68, 2009 May 15.
Artículo en Inglés | MEDLINE | ID: mdl-19268445

RESUMEN

The Iroquois (Irx) genes encode homeoproteins conserved during evolution. Vertebrate genomes contain six Irx genes organized in two clusters, IrxA (which harbors Irx1, Irx2 and Irx4) and IrxB (which harbors Irx3, Irx5 and Irx6). To determine the precise role of these genes during development and their putative redundancies, we conducted a comparative expression analysis and a comprehensive loss-of-function study of all the early expressed Irx genes (Irx1-5) using specific morpholinos in Xenopus. We found that the five Irx genes display largely overlapping expression patterns and contribute to neural patterning. All Irx genes are required for proper formation of posterior forebrain, midbrain, hindbrain and, to a lesser an extent, spinal cord. Nevertheless, Irx1 and Irx3 seem to have a predominant role during regionalization of the neural plate. In addition, we find that the common anterior limit of Irx gene expression, which will correspond to the future border between the prethalamus and thalamus, is defined by mutual repression between Fezf and Irx proteins. This mutual repression is likely direct. Finally, we show that Arx, another anteriorly expressed repressor, also contribute to delineate the anterior border of Irx expression.


Asunto(s)
Tipificación del Cuerpo , Proteínas de Homeodominio/genética , Proteínas Represoras/genética , Tálamo/embriología , Factores de Transcripción/genética , Proteínas de Xenopus/genética , Xenopus/embriología , Animales , Secuencia de Bases , Cartilla de ADN , Hibridación in Situ , Xenopus/genética
11.
Plant Physiol ; 148(2): 856-69, 2008 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-18753286

RESUMEN

Transporters for di- and tripeptides belong to the large and poorly characterized PTR/NRT1 (peptide transporter/nitrate transporter 1) family. A new member of this gene family, AtPTR5, was isolated from Arabidopsis (Arabidopsis thaliana). Expression of AtPTR5 was analyzed and compared with tissue specificity of the closely related AtPTR1 to discern their roles in planta. Both transporters facilitate transport of dipeptides with high affinity and are localized at the plasma membrane. Mutants, double mutants, and overexpressing lines were exposed to several dipeptides, including toxic peptides, to analyze how the modified transporter expression affects pollen germination, growth of pollen tubes, root, and shoot. Analysis of atptr5 mutants and AtPTR5-overexpressing lines showed that AtPTR5 facilitates peptide transport into germinating pollen and possibly into maturating pollen, ovules, and seeds. In contrast, AtPTR1 plays a role in uptake of peptides by roots indicated by reduced nitrogen (N) levels and reduced growth of atptr1 mutants on medium with dipeptides as the sole N source. Furthermore, overexpression of AtPTR5 resulted in enhanced shoot growth and increased N content. The function in peptide uptake was further confirmed with toxic peptides, which inhibited growth. The results show that closely related members of the PTR/NRT1 family have different functions in planta. This study also provides evidence that the use of organic N is not restricted to amino acids, but that dipeptides should be considered as a N source and transport form in plants.


Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Dipéptidos/metabolismo , Proteínas de Transporte de Membrana/metabolismo , Animales , Arabidopsis/genética , Arabidopsis/crecimiento & desarrollo , Proteínas de Arabidopsis/genética , Transporte Biológico/genética , ADN Bacteriano/genética , Regulación de la Expresión Génica de las Plantas , Genes de Plantas , Prueba de Complementación Genética , Germinación , Proteínas de Transporte de Membrana/genética , Mutagénesis Insercional , Nitrógeno/metabolismo , Oocitos/metabolismo , Raíces de Plantas/genética , Raíces de Plantas/crecimiento & desarrollo , Raíces de Plantas/metabolismo , Polen/genética , Polen/crecimiento & desarrollo , Polen/metabolismo , ARN de Planta/genética , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/metabolismo , Semillas/genética , Semillas/crecimiento & desarrollo , Semillas/metabolismo , Xenopus/genética , Xenopus/metabolismo
12.
Plant Physiol ; 145(4): 1395-407, 2007 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-17951450

RESUMEN

Of the four genes of the Arabidopsis (Arabidopsis thaliana) INOSITOL TRANSPORTER family (AtINT family) so far only AtINT4 has been described. Here we present the characterization of AtINT2 and AtINT3. cDNA sequencing revealed that the AtINT3 gene is incorrectly spliced and encodes a truncated protein of only 182 amino acids with four transmembrane helices. In contrast, AtINT2 codes for a functional transporter. AtINT2 localization in the plasma membrane was demonstrated by transient expression of an AtINT2-GREEN FLUORESCENT PROTEIN fusion in Arabidopsis and tobacco (Nicotiana tabacum) epidermis cells and in Arabidopsis protoplasts. Its functional and kinetic properties were determined by expression in yeast (Saccharomyces cerevisiae) cells and Xenopus laevis oocytes. Expression of AtINT2 in a Deltaitr1 (inositol uptake)/Deltaino1 (inositol biosynthesis) double mutant of bakers' yeast complemented the deficiency of this mutant to grow on low concentrations of myoinositol. In oocytes, AtINT2 mediated the symport of H(+) and several inositol epimers, such as myoinositol, scylloinositol, d-chiroinositol, and mucoinositol. The preference for individual epimers differed from that found for AtINT4. Moreover, AtINT2 has a lower affinity for myoinositol (K(m) = 0.7-1.0 mm) than AtINT4 (K(m) = 0.24 mm), and the K(m) is slightly voltage dependent, which was not observed for AtINT4. Organ and tissue specificity of AtINT2 expression was analyzed in AtINT2 promoter/reporter gene plants and showed weak expression in the anther tapetum, the vasculature, and the leaf mesophyll. A T-DNA insertion line (Atint2.1) and an Atint2.1/Atint4.2 double mutant were analyzed under different growth conditions. The physiological roles of AtINT2 are discussed.


Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Membrana Celular/metabolismo , Inositol/metabolismo , Simportadores/metabolismo , Animales , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Clonación Molecular , ADN Complementario , Expresión Génica , Genes Reporteros , Glucuronidasa/metabolismo , Proteínas Fluorescentes Verdes/metabolismo , Inmunohistoquímica , Datos de Secuencia Molecular , Mutación , Oocitos/metabolismo , Regiones Promotoras Genéticas , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/metabolismo , Análisis de Secuencia de ADN , Simportadores/genética , Transfección , Xenopus/genética , Xenopus/metabolismo
13.
Dev Growth Differ ; 48(9): 575-85, 2006 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-17118012

RESUMEN

Using a subtracted Xenopus cDNA library based on the differential sensitivity of anterior and posterior genes to retinoic acid, we isolated a novel Xenopus nuclear GTP-binding protein (XGB). XGB is expressed prominently in the optic primordia at the tailbud stage. The N-terminal region of XGB contains a set of GTP-binding protein motifs, and the C-terminal region contains two putative nuclear localization signals and two coiled regions. A GFP-XGB fusion protein was expressed in the nucleus of NIH3T3 cells where it bound to subnuclear structures. Truncated C-terminal constructs of XGB containing both nuclear localization signal(s) and coiled region(s) suppressed eye formation, whereas neither the N-terminal construct nor constructs with a mutated GTP-binding protein motif affected eye formation. Expression of Pax6 and Rx1 genes, which are crucial for eye development, was reduced in embryos overexpressing the C-terminal constructs of XGB. Suppression of Pax6 and Rx1 at earlier developmental stages as well as perturbation of eye formation at later stages was counteracted by co-expression of wild-type XGB. We conclude that XGB plays a role in the formation of optic primordia through activation of at least two eye field transcription factors.


Asunto(s)
Ojo/embriología , Proteínas de Unión al GTP/metabolismo , Proteínas de Xenopus/metabolismo , Xenopus/embriología , Secuencia de Aminoácidos , Animales , ADN Complementario , Embrión no Mamífero , Desarrollo Embrionario/genética , Ojo/metabolismo , Proteínas de Unión al GTP/genética , Regulación del Desarrollo de la Expresión Génica , Genes Homeobox , Datos de Secuencia Molecular , Xenopus/genética , Proteínas de Xenopus/genética
14.
Gene ; 377: 46-55, 2006 Aug 01.
Artículo en Inglés | MEDLINE | ID: mdl-16781089

RESUMEN

Angiotensin-converting enzyme 2 (ACE2), a newly identified member in the renin-angiotensin system (RAS), acts as a negative regulator of ACE. It is mainly expressed in cardiac blood vessels and the tubular epithelia of kidneys and abnormal expression has been implicated in diabetes, hypertension and heart failure. The mechanism and physiological function of this zinc metallopeptidase in mammals are not yet fully understood. Non-mammalian vertebrate models offer attractive and simple alternatives that could facilitate the exploration of ACE2 function. In this paper we report the in silico analysis of Ace2 genes from the Gallus (chicken), Xenopus (frog), Fugu and Tetraodon (pufferfish) genome assembly databases, and from the Danio (zebrafish) cDNA library. Exon ambiguities of Danio and Xenopus Ace2s were resolved by RT-PCR and 3'RACE. Analyses of the exon-intron structures, alignment, phylogeny and hydrophilicity plots, together with the conserved synteny among these vertebrates, support the orthologous relationship between mammalian and non-mammalian ACE2s. The putative promoters of Ace2 from human, Tetraodon and Xenopus tropicalis drove the expression of enhanced green fluorescent protein (EGFP) specifically in the heart tissue of transgenic Xenopus thus making it a suitable model for future functional genomic studies. Additionally, the search for conserved cis-elements resulted in the discovery of WGATAR motifs in all the putative Ace2 promoters from 7 different animals, suggesting a possible role of GATA family transcriptional factors in regulating the expression of Ace2.


Asunto(s)
Peptidil-Dipeptidasa A/genética , Vertebrados/genética , Enzima Convertidora de Angiotensina 2 , Animales , Animales Modificados Genéticamente , Secuencia de Bases , Pollos/genética , Mapeo Cromosómico , ADN Complementario/genética , Exones , Proteínas Fluorescentes Verdes/genética , Humanos , Intrones , Datos de Secuencia Molecular , Peptidil-Dipeptidasa A/química , Filogenia , Regiones Promotoras Genéticas , Proteínas Recombinantes/genética , Takifugu/genética , Tetraodontiformes/genética , Xenopus/genética , Pez Cebra/genética
15.
Gene ; 367: 135-41, 2006 Feb 15.
Artículo en Inglés | MEDLINE | ID: mdl-16314051

RESUMEN

We have characterized a cDNA encoding a Xenopus laevis apyrase (XAPY) that is expressed during embryogenesis. XAPY is highly homologous to two recently described mammalian apyrases, human SCAN-1 and rat Ca2+-NDPase, and to a lesser extent the salivary apyrase of the blood-feeding arthropod Cimex lectularis. RT-PCR analysis shows that Xapy is expressed at all the developmental stages tested, from oocytes through to tadpoles. Xapy transcripts are widely distributed in the embryo, but from late neurulae through to late tailbud stages they are highly enriched in the cement gland, an adhesive organ in the epidermis of the head. When expressed in HEK 293 cells, XAPY is largely retained in the endoplasmic reticulum, although some is also secreted. XAPY conditioned media hydrolyses UDP and UTP, confirming that it is a functional apyrase.


Asunto(s)
Apirasa/metabolismo , Regulación del Desarrollo de la Expresión Génica , Nucleotidasas/metabolismo , Xenopus/genética , Secuencia de Aminoácidos , Animales , Apirasa/química , Apirasa/genética , Secuencia de Bases , Chinches/enzimología , Línea Celular , Codón , Codón Iniciador , Secuencia Conservada , Medios de Cultivo Condicionados/farmacología , ADN Complementario/genética , Embrión no Mamífero , Retículo Endoplásmico/enzimología , Retículo Endoplásmico/metabolismo , Fluoresceína , Técnica del Anticuerpo Fluorescente Indirecta , Colorantes Fluorescentes , Humanos , Hibridación in Situ , Metamorfosis Biológica , Microscopía Fluorescente , Datos de Secuencia Molecular , Nucleotidasas/química , Nucleotidasas/genética , Estructura Terciaria de Proteína , ARN Mensajero/análisis , Ratas , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Análisis de Secuencia de ARN , Homología de Secuencia de Aminoácido , Distribución Tisular , Transcripción Genética , Uridina Difosfato/metabolismo , Uridina Trifosfato/metabolismo , Xenopus/embriología , Xenopus/metabolismo
16.
J Mol Evol ; 60(1): 72-80, 2005 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-15696369

RESUMEN

The ABCA4 (ABCR) gene encodes a retinal-specific ATP-binding cassette transporter. Mutations in ABCA4 are responsible for several recessive macular dystrophies and susceptibility to age related macular degeneration (AMD). The protein appears to function as a flippase of all-trans-retinaldehyde and/or its derivatives across the membrane of outer segment disks and is a potentially important element in recycling visual cycle metabolites. However, the understanding of ABCA4's role in the visual cycle is limited due to the lack of a direct functional assay. An evolutionary analysis of ABCA4 may aid in the identification of conserved elements, the preservation of which implies functional importance. To date, only human, murine, and bovine ABCA4 genes are described. We have identified ABCA4 genes from African (Xenopus laevis) and Western (Silurana tropicalis) clawed frogs. A comparative analysis describing the evolutionary relationships between the frog ABCA4s, annotated T. rubripes ABCA4, and mammalian ABCA4 proteins was carried out. Several segments are conserved in both intradiscal loop (IL) domains, in addition to the transmembrane and ATP-binding domains. Nonconserved segments were found in the IL and cytoplasmic linker domains. Maximum likelihood analyses of the aligned sequences strongly suggest that ABCA4 was subject to purifying selection. Collectively, these data corroborate the current evolutionary model where two distinct ABCA half-transporter progenitors were combined to form a full ABCA4 progenitor in ancestral chordates. We speculate that evolutionary alterations may increase the retinoid metabolite recycling capacity of ABCA4 and may improve dark adaptation.


Asunto(s)
Transportadoras de Casetes de Unión a ATP/genética , Evolución Molecular , Xenopus/genética , Secuencia de Aminoácidos , Animales , Clonación Molecular , ADN Complementario/química , ADN Complementario/genética , Femenino , Masculino , Datos de Secuencia Molecular , Filogenia , Retina/metabolismo , Alineación de Secuencia , Análisis de Secuencia de ADN , Homología de Secuencia de Aminoácido , Especificidad de la Especie , Proteínas de Xenopus/genética , Xenopus laevis/genética
17.
Eur J Biochem ; 271(6): 1135-44, 2004 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-15009192

RESUMEN

The HIVEP gene family encodes for very large sequence-specific DNA binding proteins containing multiple zinc fingers. Three mammalian paralogous genes have been identified, HIVEP1, -2 and -3, as well as the closely related Drosophila gene, Schnurri. These genes have been found to directly participate in the transcriptional regulation of a variety of genes. Mammalian HIVEP members have been implicated in signaling by TNF-alpha and in the positive selection of thymocytes, while Schnurri has been shown to be an essential component of the TGF-beta signaling pathway. In this study, we describe the isolation of Xenopus HIVEP1, as well as partial cDNAs of HIVEP2 and -3. Analysis of the temporal and spatial expression of the XHIVEP transcripts during early embryogenesis revealed ubiquitous expression of the transcripts. Assays using Xenopus oocytes mapped XHIVEP1 domains that are responsible for nuclear export and import activity. The DNA binding specificity of XHIVEP was characterized using a PCR-mediated selection and gel mobility shift assays.


Asunto(s)
ADN Complementario/aislamiento & purificación , Proteínas de Unión al ADN/genética , Proteínas de Unión al ADN/metabolismo , Factores de Transcripción , Proteínas de Xenopus , Xenopus/genética , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Núcleo Celular/metabolismo , ADN Complementario/genética , ADN Complementario/metabolismo , Expresión Génica , Genes , Proteínas de Homeodominio/genética , Datos de Secuencia Molecular , Oocitos/metabolismo , Regiones Promotoras Genéticas , Señales de Clasificación de Proteína , ARN Mensajero/biosíntesis , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Homología de Secuencia de Aminoácido , Distribución Tisular , Transcripción Genética , Xenopus/metabolismo , Dedos de Zinc/genética
18.
Dev Growth Differ ; 45(2): 143-52, 2003 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-12752502

RESUMEN

The processes of development and differentiation of the pancreas, an endoderm-derived vital organ that consists of both endocrine and exocrine cells, are highly conserved across most vertebrates. Recently, an in vitro system has been reported to induce embryonic pancreas using multipotent Xenopus ectodermal cells treated with activin and retinoic acid. In this study, this system was first modified to eliminate the mesoderm-derived pronephros. It was found that pronephros, which appeared with the use of low concentrations of activin, was eliminated at higher concentrations (400 ng/mL), while pancreas developed at a high frequency. Using this modified system, subtractive hybridization screening for novel pancreatic genes was done to better understand the molecular mechanisms of pancreas formation. Four novel genes were identified and characterized that were also found to be specifically expressed in the developing pancreas: carboxyl ester lipase, pancreatic elastase2, placental protein11 and protein disulfide isomerase A2 precursor. This in vitro pancreas-induction system may provide a useful model for analysis of the molecular mechanisms that function during pancreas development.


Asunto(s)
Embrión no Mamífero/fisiología , Regulación del Desarrollo de la Expresión Génica , Páncreas/embriología , Xenopus/embriología , Xenopus/genética , Activinas/farmacología , Secuencia de Aminoácidos , Animales , Células Cultivadas , ADN Complementario/genética , Ectodermo/citología , Embrión no Mamífero/citología , Enzimas/química , Enzimas/genética , Femenino , Humanos , Hibridación in Situ/métodos , Islotes Pancreáticos/embriología , Masculino , Datos de Secuencia Molecular , Morfogénesis , Técnicas de Cultivo de Órganos , Alineación de Secuencia , Homología de Secuencia de Aminoácido , Tretinoina/farmacología
19.
Neuroreport ; 14(3): 351-7, 2003 Mar 03.
Artículo en Inglés | MEDLINE | ID: mdl-12634482

RESUMEN

A cDNA encoding P2Y(1) receptor was isolated by cross-hybridization with chicken homolog. The deduced amino acid sequence of P2Y(1) receptor with 361 amino residues is 80-85% identical to human, rodent and avian homologs. When the cDNA was expressed in mammalian cells, the activation of P2Y(1) receptor by adenine nucleotides stimulated the accumulation of inositol phosphate, and adenosine 3',5'-bismonophosphate (A3P5P) or other antagonists blocked its action; these pharmacological properties showed resemblance of P2Y(1) receptor family in higher vertebrate. A transcript encoding P2Y(1) receptor at approximately 3.2 kb was revealed in the brain, spinal cord and muscle of adult, and it is strongly expressed in developing brain, spinal cord and myotomal muscles of the embryos by hybridization. P2Y(1) receptor was shown to be restricted to the neuromuscular junctions and co-localized with AChRs in adult muscle. These results support the notion that ATP and its P2Y(1) receptor subtype are effectors in organizing the post-synaptic apparatus.


Asunto(s)
ADN Complementario/genética , Unión Neuromuscular/metabolismo , Receptores Purinérgicos P2/genética , Receptores Purinérgicos P2/metabolismo , Xenopus/genética , Xenopus/metabolismo , Secuencia de Aminoácidos/genética , Animales , ADN Complementario/aislamiento & purificación , Inmunohistoquímica/métodos , Hibridación in Situ , Datos de Secuencia Molecular , ARN Mensajero/metabolismo , Receptores Purinérgicos P2Y1 , Coloración y Etiquetado
20.
J Pharmacol Exp Ther ; 301(3): 1052-9, 2002 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-12023537

RESUMEN

Ginseng saponins, major active components of ginseng root used by folk medicine in the treatment of various diseases, produce multiple pharmacological responses having many effects on the central and peripheral nervous system. Specifically, ginsenoside Rg(2) has been shown to block the nicotinic acetylcholine receptors in bovine chromaffin cells. We have studied the effect of Rg(2) on different types of human neuronal nicotinic acetylcholine receptors (nAChRs), both homomeric and heteromeric, expressed in Xenopus oocytes. Rg(2) did not affect the acetylcholine (ACh)-induced currents in alpha(7) human receptors, however Rg(2) affected the peak currents, and mainly the desensitization of heteromeric receptors alpha(3)beta(4), alpha(3)beta(2), alpha(4)beta(4), and alpha(4)beta(2). Both effects, a diminution of peak current and an increase of desensitization, are dose-dependent and are very similar for all the receptors. The mechanism of action has been studied in more detail in alpha(3)beta(4) and alpha(4)beta(2) receptors where we found a negligible shift in the ACh dose-response curves and a persistence of the Rg(2) effects at high ACh concentrations, indicative of a noncompetitive antagonism. A lack of voltage dependence on the reduction of the peak currents induced by ACh also suggests that Rg(2) does not act as an open channel blocker of human nAChR. The results indicate that Rg(2) acts specifically on heteromeric human nAChRs modulating their desensitization and suggest a possible mechanism by which this saponin contributes to the multiple therapeutic effects of ginseng.


Asunto(s)
Ginsenósidos , Panax/química , Receptores Nicotínicos/metabolismo , Saponinas/farmacología , Animales , Relación Dosis-Respuesta a Droga , Vectores Genéticos/antagonistas & inhibidores , Vectores Genéticos/metabolismo , Humanos , Canales Iónicos/antagonistas & inhibidores , Canales Iónicos/metabolismo , Potenciales de la Membrana/efectos de los fármacos , Potenciales de la Membrana/fisiología , Oocitos/efectos de los fármacos , Oocitos/metabolismo , Técnicas de Placa-Clamp , Receptores Nicotínicos/fisiología , Saponinas/química , Transfección , Xenopus/genética
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