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Métodos Terapêuticos e Terapias MTCI
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2.
BMC Genomics ; 21(1): 331, 2020 Apr 29.
Artigo em Inglês | MEDLINE | ID: mdl-32349672

RESUMO

BACKGROUND: Salivary cell secretion (SCS) plays a critical role in blood feeding by medicinal leeches, making them of use for certain medical purposes even today. RESULTS: We annotated the Hirudo medicinalis genome and performed RNA-seq on salivary cells isolated from three closely related leech species, H. medicinalis, Hirudo orientalis, and Hirudo verbana. Differential expression analysis verified by proteomics identified salivary cell-specific gene expression, many of which encode previously unknown salivary components. However, the genes encoding known anticoagulants have been found to be expressed not only in salivary cells. The function-related analysis of the unique salivary cell genes enabled an update of the concept of interactions between salivary proteins and components of haemostasis. CONCLUSIONS: Here we report a genome draft of Hirudo medicinalis and describe identification of novel salivary proteins and new homologs of genes encoding known anticoagulants in transcriptomes of three medicinal leech species. Our data provide new insights in genetics of blood-feeding lifestyle in leeches.


Assuntos
Genoma , Hirudo medicinalis/genética , Proteínas e Peptídeos Salivares/genética , Animais , Anticoagulantes/metabolismo , Perfilação da Expressão Gênica , Regulação da Expressão Gênica , Hirudo medicinalis/metabolismo , Sanguessugas/classificação , Sanguessugas/genética , Sanguessugas/metabolismo , Proteômica , Saliva/metabolismo , Proteínas e Peptídeos Salivares/metabolismo
3.
J Bioinform Comput Biol ; 16(2): 1840006, 2018 04.
Artigo em Inglês | MEDLINE | ID: mdl-29361893

RESUMO

As essential conservative component of the innate immune systems of living organisms, antimicrobial peptides (AMPs) could complement pharmaceuticals that increasingly fail to combat various pathogens exhibiting increased resistance to microbial antibiotics. Among the properties of AMPs that suggest their potential as therapeutic agents, diverse peptides in the venoms of various predators demonstrate antimicrobial activity and kill a wide range of microorganisms. To identify potent AMPs, the study reported here involved a transcriptomic profiling of the tentacle secretion of the sea anemone Cnidopus japonicus. An in silico search algorithm designed to discover toxin-like proteins containing AMPs was developed based on the evaluation of the properties and structural peculiarities of amino acid sequences. The algorithm revealed new proteins of the anemone containing antimicrobial candidate sequences, and 10 AMPs verified using high-throughput proteomics were synthesized. The antimicrobial activity of the candidate molecules was experimentally estimated against Gram-positive and -negative bacteria. Ultimately, three peptides exhibited antimicrobial activity against bacterial strains, which suggests that the method can be applied to reveal new AMPs in the venoms of other predators as well.


Assuntos
Antibacterianos/farmacologia , Descoberta de Drogas/métodos , Peptídeos/genética , Peptídeos/farmacologia , Anêmonas-do-Mar/genética , Algoritmos , Animais , Antibacterianos/química , Biologia Computacional/métodos , Simulação por Computador , Avaliação Pré-Clínica de Medicamentos/métodos , Perfilação da Expressão Gênica , Bactérias Gram-Negativas/efeitos dos fármacos , Bactérias Gram-Positivas/efeitos dos fármacos , Aprendizado de Máquina , Testes de Sensibilidade Microbiana , Peptídeos/química , Estrutura Secundária de Proteína , Proteômica , Anêmonas-do-Mar/química
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