Feature-specific nutrient management of onion (Allium cepa) using machine learning and compositional methods.

While onion cultivars, irrigation and soil and crop management have been given much attention in Brazil to boost onion yields, nutrient management at field scale is still challenging due to large dosage uncertainty. Our objective was to develop an accurate feature-based fertilization model for onion crops. We assembled climatic, edaphic, and managerial features as well as tissue tests into a database of 1182 observations from multi-environment fertilizer trials conducted during 13 years in southern Brazil. The complexity of onion cropping systems was captured by machine learning (ML) methods. The RReliefF ranking algorithm showed that the split-N dosage and soil tests for micronutrients and S were the most relevant features to predict bulb yield. The decision-tree random forest and extreme gradient boosting models were accurate to predict bulb yield from the relevant predictors (R2 > 90%). As shown by the gain ratio, foliar nutrient standards for nutritionally balanced and high-yielding specimens producing > 50 Mg bulb ha-1 set apart by the ML classification models differed among cultivars. Cultivar × environment interactions support documenting local nutrient diagnosis. The split-N dosage was the most relevant controllable feature to run future universality tests set to assess models' ability to generalize to growers' fields.

The tolerance of grapevine rootstocks to copper excess and to the use of calcium and phosphorus to mitigate its phytotoxicity.

High soil copper (Cu) concentrations in vineyards can cause phytotoxicity to grapevine rootstocks. In order to mitigate toxicity, the use of grapevine rootstock genetic variation and the application of amendments are possible strategies. The aim of this study is to assess the tolerance of grapevine rootstocks to Cu excess and whether phosphorus (P) and calcium (Ca) can reduce phytotoxicity caused by Cu. Grapevine rootstock seedlings were produced from selected stakes: Paulsen 1103 (Vitis berlandieri × Vitis rupestris); SO4 (Vitis berlandieri × Vitis riparia); IAC 572 ((Vitis Riparia × Vitis rupestris) × Vitis caribaea); and Isabel (Vitis labrusca). Seedlings were grown in nutrition solution added with the following treatments: 0.3 µM Cu (control); 60 µM Cu; 60 µM Cu and 62 mg L-1 P; 60 µM Cu and 400 mg L-1 Ca. High Cu concentration caused phytotoxicity in all rootstocks, impairing their growth and decreasing nutrient concentration and photosynthetic activity. P and Ca addition had positive effect on the photosynthetic activity of all rootstocks, although it was not enough to revert growth to levels comparable with controls. Overall, based on the results, the application of P and Ca was not efficient in mitigating Cu phytotoxicity in grapevine plants grown in solution. Isabel was the most sensitive rootstock to Cu phytotoxicity, whereas Paulsen 1103 and SO4 presented more tolerance and can be used, together with other management strategies, in contaminated vineyard areas. Therefore, careful genotype rootstock selection for use in high Cu soils is important, while Ca and P are not efficient mitigators of Cu toxicity.

Garlic (Allium sativum) feature-specific nutrient dosage based on using machine learning models.

Brazil presents large yield gaps in garlic crops partly due to nutrient mismanagement at local scale. Machine learning (ML) provides powerful tools to handle numerous combinations of yield-impacting factors that help reducing the number of assumptions about nutrient management. The aim of the current study is to customize fertilizer recommendations to reach high garlic marketable yield at local scale in a pilot study. Thus, collected 15 nitrogen (N), 24 phosphorus (P), and 27 potassium (K) field experiments conducted during the 2015 to 2017 period in Santa Catarina state, Brazil. In addition, 61 growers' observational data were collected in the same region in 2018 and 2019. The data set was split into 979 experimental and observational data for model calibration and into 45 experimental data (2016) to test ML models and compare the results to state recommendations. Random Forest (RF) was the most accurate ML to predict marketable yield after cropping system (cultivar, preceding crops), climatic indices, soil test and fertilization were included features as predictor (R2 = 0.886). Random Forest remained the most accurate ML model (R2 = 0.882) after excluding cultivar and climatic features from the prediction-making process. The model suggested the application of 200 kg N ha-1 to reach maximum marketable yield in a test site in comparison to the 300 kg N ha-1 set as state recommendation. P and K fertilization also seemed to be excessive, and it highlights the great potential to reduce production costs and environmental footprint without agronomic loss. Garlic root colonization by arbuscular mycorrhizal fungi likely contributed to P and K uptake. Well-documented data sets and machine learning models could support technology transfer, reduce costs with fertilizers and yield gaps, and sustain the Brazilian garlic production.

Physiological responses of beet and cabbage plants exposed to copper and their potential insertion in human food chain.

Copper (Cu) can be toxic to vegetables when it is absorbed and accumulated at large concentrations, a fact that increases the risk of excessive addition of this metal to the human food chain. The aims of the current study are (1) to determine the Cu concentrations that have critical toxic effects on beet and cabbage plants, and the potential of these plants to enter the human food chain, as well as (2) to assess the physiological and biochemical responses of representatives of these vegetables grown in nutrient solution presenting increasing Cu concentrations. Beet and cabbage plants were grown for 75 days in pots filled with sand added with nutrient solution presenting six Cu concentrations: 0.00, 0.52, 1.02, 1.52, 2.02 and 2.52 mg Cu L-1. Dry matter yield and Cu accumulation in different plant organs were evaluated. Photosynthetic pigment contents, lipid peroxidation levels (TBARs), superoxide dismutase (SOD) and peroxidase (POD) activity and hydrogen peroxide (H2O2) concentrations in leaves were evaluated. Critical Cu concentrations that led to toxicity in plant organs such as beetroot and cabbage head, which are often found in human diets, corresponded to 1.43 mg Cu L-1 and 1.59 mg Cu L-1, respectively. High Cu concentrations in the nutrient solution have increased Cu concentrations and accumulation in plant tissues. This outcome justified the increased POD and SOD enzyme activity in the leaves of beet and cabbage plants, respectively, and was the cause of reduced plant growth in both crops. Cabbage plants presented higher tolerance to increased Cu levels in the growing environment than beet plants. However, it is necessary being careful at the time to consume both vegetables, when they are grown in Cu-enriched environments.

Root system structure as a criterion for the selection of grapevine genotypes that are tolerant to excess copper and the ability of phosphorus to mitigate toxicity.

Using tolerant genotypes and the correct use of fertilizers can mitigate the negative effect of elevated Cu levels in the growing medium. In this context, the study aimed to evaluate the effects of excess Cu in the root system and the effectiveness of phosphorus (P) in minimizing the phytotoxicity of Cu in three genotypes: IAC 572 [(Vitis riparia x V. rupestris) x V. caribaea], Magnolia (V. rotundifolia) and Paulsen 1103 (V. berlandieri x V. rupestris). The plants were grown in nutrient solutions and were supplemented with the following treatments: 0.3 µM Cu (Control), 60 µM Cu (Cu) and 60 µM Cu and 62 mg L-1 P (Cu + P). Root samples were sectioned for microscopy analyses, and the shoot lengths, shoot and root dry matter, relative growth rates (RGR) and tissue nutrient contents were also evaluated. The roots of the genotypes that were cultivated with high Cu concentrations produced greater numbers of branches and larger diameters, except for Magnolia genotype that was cultivated in a Cu + P solution, which had an organization similar to the control. Excess Cu caused accumulations of phenolic compounds and decreased shoot lengths, dry matter and RGR in the genotypes. In the treatments with excess Cu, there were increases in this element in the tissues, but P decreased the metal concentrations in Magnolia roots. Therefore, Cu accumulations alter the root system development patterns, growth parameters and tissue nutrient contents in the studied genotypes. Magnolia has a higher tolerance and is also the only genotype for which the use of P has been shown to be effective.

Natural abundance analysis of the role played by 15 N as indicator for the certification of organic-system deriving food.

BACKGROUND: The natural abundance of stable isotope 15 N (δ15 N) in production systems has emerged as an alternative to distinguish organic products from conventional ones. This study evaluated the use of δ15 N values recorded for nitrogen fertilizers, soil and plant tissue in order to set the differences between organic and conventional agricultural production systems applied to rice, potatoes, apple and banana crops. RESULTS: Values of δ15 N recorded for N sources ranged from +5.58‰ to +18.27‰ and from -3.55‰ to +3.19‰ in organic and synthetic fertilizers, respectively. Values recorded for δ15 N in food from organic rice, potatoes and banana farms were higher than values recorded for δ15 N in conventional farms; the same was observed for values recorded for δ15 N in leaves from the four crops. CONCLUSION: Results have allowed for differentiation between production systems due to values of δ15 N recorded in leaves of all crops and food, for rice, potatoes and banana trees. © 2021 Society of Chemical Industry.

Contribution of nitrogen derived from mineral supplementation for soybean seedlings / Contribuição do nitrogênio derivado da suplementação mineral em sementes para plântulas de soja

ABSTRACT Seeds can absorb N from mineral supplementation, thus stimulating seedling development in soybeans (Glycine max (L.) Merrill). This study aimed to evaluate the contribution to soybean seedlings of N derived from mineral supplementation in seeds with different nutritional contents. Seeds of the cultivar BMX Potência RR received mineral supplementation enriched with 2.5% excess 15N. The treatments were performed in seeds in two lots, one with high and one with low nutritional content. At 2, 6 and 10 days after sowing on paper towels, the seedlings were collected and separated into cotyledons, roots and shoots. Dry matter production, root length and root volume were assessed. Total N and 15N values were analyzed in the seedling organ tissues. The seeds from the lot with lower nutritional content absorbed more N from the mineral supplement, which was accumulated in the cotyledons and redistributed to the root systems and cotyledons. At 10 days after sowing, most of the N in the organs of soybean seedlings was derived from the seed reserves, regardless of nutritional content. Thus, application of N through mineral supplementation is of low importance for the development and nutrition of seedlings.

RESUMO Sementes podem absorver N de suplementos minerais, estimulando o desenvolvimento de plântulas. O estudo objetivou avaliar a contribuição de N derivado da suplementação mineral em sementes com diferentes teores nutricionais, para plântulas de soja. Sementes de dois lotes da cultivar BMX Potência RR, contrastantes quanto ao teor nutricional, foram submetidas a aplicação de suplemento mineral enriquecido com 2,5% átomos de 15N em excesso. Aos 2, 6 e 10 dias após a semeadura em papel toalha, plântulas foram coletadas, separadas em cotilédones, sistema radicular e parte aérea. A produção de matéria seca, o comprimento e volume do sistema radicular foram avaliados. No tecido dos órgãos das plântulas foram analisados os totais de N e 15N. As sementes derivadas do lote com menor teor nutricional absorveram mais N do suplemento mineral, que foi acumulado nos cotilédones e redistribuído para o sistema radicular e parte aérea. A maior parte do N na soja ao longo de 10 dias após a semeadura é derivada das reservas da semente independentemente do teor nutricional inicial. A aplicação de N via suplementação mineral é de pouca importância para o crescimento e desenvolvimento de plântulas.

Phosphorus allocation and phosphatase activity in grasses with different growth rates.

Different growth rates of grasses from South American natural grasslands are adaptations to soils of low fertility. Grasses with fast growth rate are species with an accumulation of nutrients in soluble forms, with a high metabolic rate. This work aimed to study whether grasses with different growth rates have different phosphorus (P) uptake and efficiency of P use with high and low P availability in soil, as well as whether phosphatase activity is related to the species growth rate and variations in P biochemical forms in the tissues. Three native grasses (Axonopus affinis, Paspalum notatum, and Andropogon lateralis) were grown in pots with soil. Along plant growth, biomass production and its structural components were measured, as well as leaf acid phosphatase activity and leaf P chemical fractions. At 40 days of growth, leaf acid phosphatase activity declined by about 20-30% with an increase of P availability in soil for A. affinis and P. notatum, respectively. Under both soil P levels, P. notatum showed the highest plant total biomass, leaf dry weight and highest P use efficiency. A. affinis presented the higher P uptake efficiency and soluble organic P concentration in the leaf tissues. A. lateralis showed P-Lipid concentration 1.6 and 1.3 times higher than A. affinis and P. notatum, respectively. In conclusion, acid phosphatase activity in grass of higher growth rate is related to higher remobilization of P due to higher demand, as in A. affinis, and higher growth rates are associated with higher P uptake efficiency.

Effects of Rhizophagus clarus and P availability in the tolerance and physiological response of Mucuna cinereum to copper.

Arbuscular mycorrhizal fungi (AMF) improve plant ability to uptake P and tolerate heavy metals. This study aimed to evaluate the effect of available P and the inoculation of Rhizophagus clarus in a Cu-contaminated soil (i) on the activity of acid phosphatases (soil and plant), the presence of glomalin, and (ii) in the biochemical and physiological status of Mucuna cinereum. A Typic Hapludalf soil artificially contaminated by adding 60 mg kg-1 Cu was used in a 3 × 2 factorial design with three replicates. Treatments consisted of three P levels: 0, 40, and 100 mg kg-1 P. Each P treatment level was inoculated (+AMF)/non-inoculated (-AMF) with 200 spores of R. clarus per pot, and plants grown for 45 days. The addition of at least 40 mg kg-1 P and the inoculation of plants with R. clarus proved to be efficient to reduce Cu phytotoxicity and increase dry matter yield. Mycorrhization and phosphate fertilization reduced the activity of enzymes regulating oxidative stress (SOD and POD), and altered the chlorophyll a fluorescence parameters, due to the lower stress caused by available Cu. These results suggest a synergism between the application of P and the inoculation with R. clarus, favoring the growth of M. cinereum in a Cu-contaminated soil. This study shows that AMF inoculation represents an interesting alternative to P fertilization to improve plant development when exposed to excess Cu.

Effect of arbuscular mycorrhizal fungi on young vines in copper-contaminated soil.

High copper (Cu) levels in uprooted old vineyard soils may cause toxicity in transplanted young vines, although such toxicity may be reduced by inoculating plants with arbuscular mycorrhizal fungi (AMF). The objective of this study was to evaluate the effects of AMF on the plant growth, chlorophyll contents, mycorrhizal colonization, and Cu and phosphorus (P) absorption in young vines cultivated in a vineyard soil contaminated by Cu. Commercial vineyard soil with high Cu levels was placed in plastic tubes and transplanted with young vines, which were inoculated with six AMF species (Dentiscutata heterogama, Gigaspora gigantea, Acaulospora morrowiae, A. colombiana, Rhizophagus clarus, R. irregularis) and a control treatment on randomized blocks with 12 replicates. After 130 days, the mycorrhizal colonization, root and shoot dry matter (DM), height increment, P and Cu absorption, and chlorophyll contents were evaluated. The height increment, shoot DM and chlorophyll contents were not promoted by AMF, although the root DM was increased by R. clarus and R. irregularis, which had the greatest mycorrhizal colonization and P uptake. AMF increased Cu absorption but decreased its transport to shoots. Thus, AMF species, particularly R. clarus and R. irregularis, contribute to the establishment of young vines exposed to high Cu levels.

Effect of arbuscular mycorrhizal fungi on young vines in copper-contaminated soil

Abstract High copper (Cu) levels in uprooted old vineyard soils may cause toxicity in transplanted young vines, although such toxicity may be reduced by inoculating plants with arbuscular mycorrhizal fungi (AMF). The objective of this study was to evaluate the effects of AMF on the plant growth, chlorophyll contents, mycorrhizal colonization, and Cu and phosphorus (P) absorption in young vines cultivated in a vineyard soil contaminated by Cu. Commercial vineyard soil with high Cu levels was placed in plastic tubes and transplanted with young vines, which were inoculated with six AMF species (Dentiscutata heterogama, Gigaspora gigantea, Acaulospora morrowiae, A. colombiana, Rhizophagus clarus, R. irregularis) and a control treatment on randomized blocks with 12 replicates. After 130 days, the mycorrhizal colonization, root and shoot dry matter (DM), height increment, P and Cu absorption, and chlorophyll contents were evaluated. The height increment, shoot DM and chlorophyll contents were not promoted by AMF, although the root DM was increased by R. clarus and R. irregularis, which had the greatest mycorrhizal colonization and P uptake. AMF increased Cu absorption but decreased its transport to shoots. Thus, AMF species, particularly R. clarus and R. irregularis, contribute to the establishment of young vines exposed to high Cu levels.

Forms of phosphorus transfer in runoff under no-tillage in a soil treated with successive swine effluents applications.

Successive swine effluent applications can substantially increase the transfer of phosphorus (P) forms in runoff. The aim of this study was to evaluate P accumulation in the soil and transfer of P forms in surface runoff from a Hapludalf soil under no-tillage subjected to successive swine effluent applications. This research was carried out in the Agricultural Engineering Department of the Federal University of Santa Maria, Brazil, from 2004 to 2007, on a Typic Hapludalf soil. Swine effluent rates of 0, 20, 40, and 80 m3 ha(-1) were broadcast over the soil surface prior to sowing of different species in a crop rotation. Soil samples were collected in stratified layers, and the levels of available P were determined. Samples of water runoff from the soil surface were collected throughout the period, and the available, soluble, particulate, and total P were measured. Successive swine effluent applications led to increases in P availability, especially in the soil surface, and P migration through the soil profile. Transfer of P forms was closely associated with runoff, which is directly related to rainfall volume. Swine effluent applications also reduced surface runoff. These results show that in areas with successive swine effluent applications, practices that promote higher water infiltration into the soil are required, e.g., crop rotation and no-tillage system.