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Mar Genomics ; 4(4): 245-51, 2011 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-22118636

RESUMO

Catalase (EC 1.11.1.6) is an important antioxidant enzyme that protects aerobic organisms against oxidative damage by degrading hydrogen peroxide to water and oxygen. In the present study, a catalase cDNA of peal oyster Pincatada fucata (designated as PoCAT) is cloned and characterized by expressed sequence tag (EST) and rapid amplification of cDNA ends (RACE) methods. PoCAT is 2428 bp long and consists of a 5'-UTR of 140 bp, an unusually long 3'-UTR of 749 bp, and an open reading frame (ORF) of 1539 bp. The ORF of PoCAT encodes a polypeptide of 512 amino acids with molecular weight of 58.1 kDa and the theoretical isoelectric point of 8.4. PoCAT shares 62.3-82.2% identity and 73.0-92.0% similarity to other catalase amino acid sequences. Sequence alignment indicates that PoCAT contains the proximal heme-ligand signature sequence (R³5¹LFSYSDT³58), the proximal active site signature (F6¹NRERIPERVVHAKGGGA78), and the three catalytic amino acid residues (His7², Asn¹45, and Tyr³55). PoCAT has two potential glycosylation sites (N4³6YS4³8 and N478FS48°) and a peroxisome targeting signal (ASL). PoCAT mRNA was ubiquitously expressed in all detected tissues, and the expression level of PoCAT mRNA was higher in intestine and mantle. The expression profile analysis showed that the expression level of PoCAT mRNA in intestine was significantly up-regulated at 2, 4 and 12 h after Vibrio alginolyticus stimulation. These results demonstrated that PoCAT is a typical member of catalase family and might be involved in innate immune responses of pearl oyster.


Assuntos
Catalase/genética , Pinctada/enzimologia , RNA Mensageiro/metabolismo , Sequência de Aminoácidos , Análise de Variância , Animais , Sequência de Bases , Catalase/metabolismo , Primers do DNA/genética , DNA Complementar/genética , Etiquetas de Sequências Expressas , Perfilação da Expressão Gênica , Imunidade Inata/genética , Dados de Sequência Molecular , Fases de Leitura Aberta/genética , Pinctada/genética , Pinctada/imunologia , Espécies Reativas de Oxigênio/metabolismo , Reação em Cadeia da Polimerase em Tempo Real , Alinhamento de Sequência , Análise de Sequência de DNA , Homologia de Sequência
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