Recent achievements and trends in experimental plant biology.

Between 21 and 25 September 2009, Krakow hosted the 4th Conference of the Polish Society of Experimental Plant Biology, co-organized with the Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, and supported by the Biochemical Society. The aim of the conference was to present and discuss the most important topics in different disciplines of plant experimental science as well as to facilitate the interaction and co-operation between scientists. To achieve this goal, about 30 top specialists in various areas of plant biology were invited to give plenary lectures in the following sessions: Plant structure and development; Plant-microbial interactions; Mitochondria and chloroplasts in cell metabolism; Stress tolerance in plants; Structural and functional organization of plant genomes; Mutants in developmental and metabolic studies; Secondary metabolites as pharmaceutics and nutraceutics; Plant membranes; and Integrating plant functions via signalling molecules: molecular mechanisms. Some of the main problems highlighted in the plenary lectures are briefly summarized in the present paper. Two poster sessions enabled a discussion of over 200 posters presented. The conference had an international character, its official language was English, and among the more than 350 participants, about 60 were from abroad. Several plenary lectures were prepared as short review papers and they are published in this issue of Biochemical Society Transactions.

A critical analysis of the new biology and the biological revolution: their impact - from medicine to evolution.

In this article, I critically analyze the impact of the new biology and the biological revolution. I argue that indiscriminate use of the words such as 'interdisciplinary,' 'integrative,' and 'revolution' has caused only confusion when applied to biology. The recent debate, especially after the exploding field of systems biology, has brought back the controversy whether molecular biology is reductionist or holistic. I look at the issues involved critically. I discuss the problem of defining the word 'gene' and argue that recent attempts to redefine the central dogma of molecular biology about the information flow from DNA to RNA to protein are not justified. I support my view with comments from the scientist who discovered RNA splicing. Several aspects of evo-devo, a new branch of biology, are discussed. I give examples from this evolution-developmental biology to show how some of Darwin's inspired guesses have had resounding victory when it was found that specific genes during embryonic development of the Galapagos finches decided the size and shape of their beaks. I discuss the recent publications which show that the conditions in the island, such as wet to dry to wet season, can bring about evolutionary changes from year to year. Thus it is essential to monitor both short and long-term evolutionary changes to get the full picture of evolution.

[Synthetic and integrative biology]. / Biologie synthétique et intégrative.

Integrative biology currently undergoes a deep renewal as we witness the increasing influence of systems biology, which explores life's logic, and of synthetic biology, which exploits it.

Artificial neural networks in biology and chemistry: the evolution of a new analytical tool.

Once regarded as an eccentric and unpromising algorithm for the analysis of scientific data, the neural network has been developed in the last decade into a powerful computational tool. Its use now spans all areas of science, from the physical sciences and engineering to the life sciences and allied subjects. Applications range from the assessment of epidemiological data or the deconvolution of spectra to highly practical applications, such as the electronic nose. This introductory chapter considers briefly the growth in the use of neural networks and provides some general background in preparation for the more detailed chapters that follow.

Systems biology at the Institute for Systems Biology.

Systems biology represents an experimental approach to biology that attempts to study biological systems in a holistic rather than an atomistic manner. Ideally this involves gathering dynamic and global data sets as well as phenotypic data from different levels of the biological information hierarchy, integrating them and modeling them graphically and/or mathematically to generate mechanistic explanations for the emergent systems properties. This requires that the biological frontiers drive the development of new measurement and visualization technologies and the pioneering of new computational and mathematical tools-all of which requires a cross-disciplinary environment composed of biologists, chemists, computer scientists, engineers, mathematicians, physicists, and physicians speaking common discipline languages. The Institute for Systems Biology has aspired to pioneer and seamlessly integrate each of these concepts.

Biotechnology of flavonoids and other phenylpropanoid-derived natural products. Part I: Chemical diversity, impacts on plant biology and human health.

Plant natural products derived from phenylalanine and the phenylpropanoid pathway are impressive in their chemical diversity and are the result of plant evolution, which has selected for the acquisition of large repertoires of pigments, structural and defensive compounds, all derived from a phenylpropanoid backbone via the plant-specific phenylpropanoid pathway. These compounds are important in plant growth, development and responses to environmental stresses and thus can have large impacts on agricultural productivity. While plant-based medicines containing phenylpropanoid-derived active components have long been used by humans, the benefits of specific flavonoids and other phenylpropanoid-derived compounds to human health and their potential for long-term health benefits have been only recognized more recently. In this part of the review, we discuss the diversity and biosynthetic origins of phenylpropanoids and particularly of the flavonoid and stilbenoid natural products. We then review data pertaining to the modes of action and biological properties of these compounds, referring on their effects on human health and physiology and their roles as plant defense and antimicrobial compounds. This review continues in Part II discussing the use of biotechnological tools targeting the rational reconstruction of multienzyme pathways in order to modify the production of such compounds in plants and model microbial systems for the benefit of agriculture and forestry.

Will dentistry be left behind at the healthcare station?

The emerging opportunities for biological approaches to managing oral health were clearly apparent fifteen years ago. Responses in this direction have been tardy because of the economic prosperity of dental practice and the financial constraints on dental education. Representative existing and promising biology based technology is described. It is argued that education must be changed to teach the context and understanding of this technology. The alternative will be to concede important aspects of oral health care to physicians and others trained in their use.

[Magnetism in biology and medicine]. / Magnetizm v biologii i meditsine.

In the paper is made an excursion into the history of foundation of electrobiology as a science with its two main trends--magnitobiology and biomagnetism. The main experimental results are given, which became a basis of a widespread application of the electromagnetic fields of different biotropic parameters in the therapy of many diseases. The possibilities are revealed of the application of the methods of recording the magnetic fields of the human brain and heart for the diagnostics of human functional and pathological states.

Psychobiology and psychiatric nursing: a philosophical matrix.

Over the past several years, conceptualizations of the mind have been challenged by a knowledge explosion in the psychobiological sciences. Such new knowledge continues to fuel a paradigm shift in psychiatry away from traditional psychodynamic models of the mind and toward ones balanced with a psychobiological dimension. The combination of psychodynamic and psychobiological fields of knowledge offers an opportunity for a holistic perspective on the human experience. Psychiatric nursing faces the challenge of integrating this new knowledge for the enrichment of its practice. To accomplish this complex task, issues need to be addressed in many areas critical to psychiatric nursing. Three areas are discussed in this article and include philosophy, communication of philosophy, and testing of philosophy. This article concludes with a discussion of some potential mechanisms to deal with the tensions generated by a paradigm shift in psychiatric nursing.