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1.
J Appl Microbiol ; 107(6): 2001-8, 2009 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-19519667

RESUMO

AIMS: The primary goal of this research was to assess the biodegradation of benzene, toluene, ethylbenzene and xylenes in sediment from Great Salt Lake, near Rozel Point, UT. METHODS AND RESULTS: An enrichment culture that degraded benzene or toluene as the sole carbon source at high salinity was developed from a sediment sample obtained from Rozel Point. The enrichment degraded benzene or toluene within 1, 2 and 5 weeks in the presence of 14%, 23% and 29% NaCl respectively. PCR studies using degenerate primers revealed that degradation occurred primarily via catechol and the meta-cleavage pathway. Molecular analysis showed that the Gammaproteobacteria were the dominant members of the enrichment and that shifts in community composition occurred during benzene metabolism. CONCLUSIONS: This study demonstrated that micro-organisms at Rozel Point have the ability to degrade hydrocarbons over a broad range of salinities (1-5 mol l(-1) NaCl) and that the members of the Gammaproteobacteria class play an important role in the degradation process. SIGNIFICANCE AND IMPACT OF THE STUDY: These results are significant as little is known about the fate of petroleum seeps at Rozel Point. Also, the identity of microbes and the key enzymes involved in the degradation steps are important for understanding natural attenuation potential of hydrocarbons.


Assuntos
Derivados de Benzeno/metabolismo , Benzeno/metabolismo , Poluentes Ambientais/metabolismo , Gammaproteobacteria/crescimento & desenvolvimento , Gammaproteobacteria/metabolismo , Sedimentos Geológicos/microbiologia , Cloreto de Sódio , Biodegradação Ambiental , Catecol 1,2-Dioxigenase/genética , Catecol 1,2-Dioxigenase/metabolismo , Catecol 2,3-Dioxigenase/genética , Catecol 2,3-Dioxigenase/metabolismo , Gammaproteobacteria/enzimologia , Gammaproteobacteria/genética , Hidrocarbonetos/metabolismo , Petróleo/metabolismo , Tolueno/metabolismo , Utah , Xilenos/metabolismo
2.
Water Res ; 43(15): 3765-76, 2009 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-19541342

RESUMO

The bacterial community structure in bulk water and in rhizosphere fractions of giant duckweed, Spirodela polyrrhiza, was quantitatively and qualitatively investigated by PCR-based methods using 6 environmental water samples to elucidate the mechanisms underlying selective accumulation of aromatic compound-degrading bacteria in the rhizosphere of S. polyrrhiza. S. polyrrhiza selectively accumulated a diverse range of aromatic compound-degrading bacteria in its rhizosphere, regardless of the origin of water samples, despite no exposure to phenol. The relative abundances of the catechol 1,2-dioxygenase (C12O) gene (C12O DNA) and catechol 2,3-dioxygenase (C23O) gene (C23O DNA) were calculated as the ratios of the copy numbers of these genes to the copy number of 16S rDNA and are referred to as the rhizosphere effect (RE) value. The RE values for C12O DNA and C23O DNA were 1.0 x 10(1)-9.3 x 10(3) and 1.7 x 10(2)-1.5 x 10(4) times as high, respectively, in rhizosphere fractions as in bulk water fractions, and these higher values were associated with a notably higher sequence diversity of C12O DNA and C23O DNA. The RE values during phenol degradation were 3.6 x 10(0)-4.3 x 10(2) and 2.2 x 10(0)-1.7 x 10(2), respectively, indicating the ability of S. polyrrhiza to selectively accumulate aromatic compound-degrading bacteria in its rhizosphere during phenol degradation. The bacterial communities in the rhizosphere fractions differed from those in the bulk water fractions, and those in the bulk water fractions were notably affected by the rhizosphere bacterial communities. S. polyrrhiza released more than 100 types of phenolic compound into its rhizosphere as root exudates at the considerably high specific release rate of 1520mg TOC and 214mg phenolic compounds/d/g root (wet weight). This ability of S. polyrrhiza might result in the selective recruitment and accumulation of a diverse range of bacteria harboring genes encoding C12O and C23O, and the subsequent accelerated degradation of phenol in the rhizosphere.


Assuntos
Araceae/microbiologia , Bactérias/enzimologia , Catecol 1,2-Dioxigenase/genética , Catecol 2,3-Dioxigenase/genética , Fenol/metabolismo , Solo/análise , Poluentes Químicos da Água/metabolismo , Bactérias/genética , Bactérias/isolamento & purificação , Biodegradação Ambiental , Catecol 1,2-Dioxigenase/metabolismo , Catecol 2,3-Dioxigenase/metabolismo , DNA Ribossômico/análise , Meio Ambiente , Água Doce/química , Água Doce/microbiologia , Genes Bacterianos , Nitrogênio/análise , Oxigênio/análise , Fósforo/análise , Raízes de Plantas/metabolismo
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