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1.
Molecules ; 27(4)2022 Feb 16.
Artigo em Inglês | MEDLINE | ID: mdl-35209114

RESUMO

In this work, a flow-based spectrofluorimetric method for iodine determination was developed. The system consisted of a miniaturized chip-based flow manifold for solutions handling and with integrated spectrofluorimetric detection. A multi-syringe module was used as a liquid driver. Iodide was quantified from its catalytic effect on the redox reaction between Ce(IV) and As(III), based on the Sandell-Kolthoff reaction. The method was applied for the determination of iodine in salt, pharmaceuticals, supplement pills, and seaweed samples without off-line pre-treatment. An in-line oxidation process, aided by UV radiation, was implemented to analyse some samples (supplement pills and seaweed samples) to eliminate interferences and release iodine from organo-iodine compounds. This feature, combined with the fluorometric reaction, makes this method simpler, faster, and more sensitive than the classic approach of the Sandell-Kolthoff reaction. The method allowed iodine to be determined within a range of 0.20-4.0 µmol L-1, with or without the in-line UV digestion, with a limit of detection of 0.028 µmol L-1 and 0.025 µmol L-1, respectively.


Assuntos
Iodo/análise , Preparações Farmacêuticas/análise , Sais/análise , Espectrometria de Fluorescência/instrumentação , Espectrometria de Fluorescência/métodos , Digestão , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Espectrometria de Fluorescência/normas , Seringas
2.
Spectrochim Acta A Mol Biomol Spectrosc ; 218: 155-160, 2019 Jul 05.
Artigo em Inglês | MEDLINE | ID: mdl-30981029

RESUMO

Recently, demand for authentication technology is growing rapidly in an attempt to overcome counterfeiting of high-value agricultural products, such as patchouli oil. Fingerprinting methods based on spectroscopy are one such technology being used for authentication. However, the spectral datasets obtained are multivariate in nature; containing thousands of data points for a single sample, making data acquisition and processing time-consuming. Therefore, reduction and simplification in the number of variables used required is needed to provide a more rapid and applicable method. Color cameras, which can capture image in the visible region light, could be such an alternative spectral data acquisition approach. In this research, a simplified spectroscopy method was developed for origin authentication of patchouli oil. The system consists of front ultraviolet light induced (365 nm) fluorescence and a white LED-based backlighting imaging system that consecutively captures the fluorescence and transmittance characteristics of the oil in the visible region. From the captured images, features were extracted and analyzed using Principle Component Analysis (PCA) to identify important image features for discrimination of origin. From the samples measured, the samples clustered around three islands of origin in the PCA space. A classification model based on fluorescence and transmittance image features (color values) could discriminate origin classes with a total accuracy of 88.46%. A lower accuracy was found for the Java class due to low sample numbers. This result demonstrates that the proposed system has the potential to be a rapid authentication tool for determining the geographical origin of patchouli oils.


Assuntos
Óleos Voláteis/análise , Imagem Óptica/métodos , Óleos de Plantas/análise , Pogostemon/química , Desenho de Equipamento , Geografia , Óleos Voláteis/classificação , Imagem Óptica/instrumentação , Óleos de Plantas/classificação , Pogostemon/classificação , Espectrometria de Fluorescência/instrumentação , Espectrometria de Fluorescência/métodos
3.
Biosens Bioelectron ; 129: 292-297, 2019 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-30249385

RESUMO

Cell culture assays for therapeutic drug screening today are fully automated. Vitality of the cells is monitored by different sensors. For such a system, we propose a new reader unit, which is capable of reading two different fluorescent sensors and electrical impedance in 24-well-plates. Main goals are to reduce cost, complexity and size while achieving a similar performance as the existing reader unit. To achieve this, measurement electronics and signal paths for frequency domain fluorescence and bio-impedance measurement are combined. Central component is an integrated circuit for impedance spectroscopy. A new compact and economic optical setup is developed to read two different sensor spots on the bottom of the well. Measurement errors introduced by different components like DFT leakage, and frequency dependent signal delays are evaluated and compensated. A set of commercially available fluorescence sensor spots is used to verify the read out performance. The results are usable, with noise slightly higher than commercial readers. To verify the impedance measurement accuracy, measurements of known resistances are conducted. In the relevant impedance and frequency range for biological applications a suitable accuracy is achieved. Due to the higher sampling rate of the new reader, the higher noise can be reduced through averaging. The new system is significantly smaller and cheaper to manufacture than commercially available devices.


Assuntos
Técnicas Biossensoriais/instrumentação , Espectrometria de Fluorescência/instrumentação , Sobrevivência Celular , Avaliação Pré-Clínica de Medicamentos/instrumentação , Impedância Elétrica , Desenho de Equipamento , Humanos , Concentração de Íons de Hidrogênio , Oxigênio/análise
4.
ACS Sens ; 3(10): 2061-2065, 2018 10 26.
Artigo em Inglês | MEDLINE | ID: mdl-30289711

RESUMO

Food fraud can be highly lucrative, and high accuracy authentication of various foodstuffs is becoming essential. Olive oil is one of the most investigated food matrices, due to its high price and low production globally, with recent food fraud examples showing little or no high quality olive oil in the tested oils. Here a simple method using a 405 nm LED flashlight and a smartphone is developed for edible oil authentication. Identification is fingerprinted by intrinsic fluorescent compounds in the oils, such as chlorophylls and polyphenols. This study uses the hue parameter of HSV-colorspace to authenticate 24 different edible oils of 9 different types and 15 different brands. For extra virgin olive oil, all nine samples are well separated from the other oil samples. The rest of the samples were also well type-distinguished by the hue parameter, which is complemented by hue-histogram analysis. This opens up opportunities for low-cost and high-throughput smartphone field-testing of edible oils on all levels of the production and supply chain.


Assuntos
Azeite de Oliva/análise , Smartphone , Espectrometria de Fluorescência/métodos , Clorofila/análise , Luz , Azeite de Oliva/química , Óleos de Plantas/análise , Óleos de Plantas/química , Polifenóis/análise , Espectrometria de Fluorescência/instrumentação
5.
Opt Express ; 26(3): 3646-3660, 2018 Feb 05.
Artigo em Inglês | MEDLINE | ID: mdl-29401892

RESUMO

Laser-induced fluorescence (LIF) techniques to analyze atmospheric aerosols are commonly applied for research and human exposure monitoring, but are very expensive or offer poor spectral resolution. Here, we discuss how a recently proposed instrument can acquire resolved fluorescence spectra from many individual particles in a single camera image using four excitation wavelengths matched with common biological fluorophores for particle discrimination at lower cost. We discuss emission intensity calibration and demonstrate spectral differentiation among four species of pollen. These data provide context for how the instrument could be developed for pollen and mold-spore detection or for use by citizen scientists.


Assuntos
Fungos , Pólen , Espectrometria de Fluorescência/instrumentação , Calibragem , Humanos , Lasers
6.
Talanta ; 174: 679-683, 2017 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-28738641

RESUMO

An interference-free and label-free sensing platform was developed for the highly sensitive detection of microRNA-21 (miRNA-21) in vitro by magnetic silicon microsphere (MNP)-reduced graphene oxide (rGO)-based sandwich probe. In this method, DNA capture probes (P1) were connected with MNPs at the 5' end and hybridized with completely complementary target miRNA. Subsequently, rGO was retained and induced the fluorescence quenching in the supernatant. Through the magnetic separation, the supernatant environment was simplified and the interference to analytical signal was eliminated. When DNA capture probe-modified magnetic silicon microspheres (MNP-P1) were adsorbed through rGO in the absence of a target and formed a sandwich structure, the formed nanostructure was easily removed from the solution by a magnetic field and the fluorescence intensity was maximally recovered. This proposed strategy, which both overcame the expensive and cumbersome fluorescent labeling, and eliminated interference to analytical signal for guaranteeing high signal-to-background ratio, exhibited high sensitivity with a detection limit as low as 0.098nM and special selectivity toward miRNA-21. The method was potentially applicable for not only detection of miRNA-21 but also various biomarker analyses just by changing capture probes.


Assuntos
Grafite/química , Imãs/química , MicroRNAs/análise , Microesferas , Óxidos/química , Silício/química , Espectrometria de Fluorescência/instrumentação , Sequência de Bases , Limite de Detecção , MicroRNAs/genética
7.
Talanta ; 171: 90-100, 2017 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-28551159

RESUMO

This work illustrates an accurate method for determination of Se by electrolytic hydride generation technique based on a novel carbon paste electrode for sample introduction combined with atomic fluorescence spectral analysis. The studies show that Se(IV) can be converted efficiently to SeH2 on an L-cysteine modified carbon paste electrode (CMCPE), which has never been reported before. Significantly, generation from Se(IV) implies that the use of carbon paste electrode-based electron-induced hydride generation system to achieve efficiency is almost 90% to that obtained by chemical hydride generation, and the response obtained from CMCPE is 2 and 3 times of that from the Pb and graphite electrode, respectively. Results also display that the lifetime and the stability of the CMCPE is superior to that of L-cysteine ornamented graphite electrode fabricated by covalently bonding. Under the optimal conditions, a low concentration limit of detection 0.065µgL-1 of Se(IV) is achieved. The repeatability denoted as % RSD is 2.2% for 1.0µgL-1 Se(IV). The utility of the studied method is compared with certified reference materials as well as several edible samples. The advantages and limitations of this method, compared with existing techniques, are also discussed.


Assuntos
Carbono/química , Cisteína/química , Limite de Detecção , Oryza/química , Selênio/análise , Espectrometria de Fluorescência/instrumentação , Água/química , Eletrodos , Eletrólitos/química , Pomadas , Selênio/química , Propriedades de Superfície
8.
Anal Chem ; 89(9): 5152-5160, 2017 05 02.
Artigo em Inglês | MEDLINE | ID: mdl-28376620

RESUMO

An all-in-one paper-based analytical device (PAD) was successfully developed for visual fluorescence detection of carcinoembryonic antigen (CEA) on CdTe/CdSe quantum dot (QD)-enzyme-impregnated paper by coupling with a bioresponsive controlled-release system from DNA-gated mesoporous silica nanocontainers (MSNs). The assay was carried out in a centrifuge tube by using glucose-loaded MSNs with a CEA aptamer and a QD-enzyme-paper attached on the lid. Initially, single-strand complementary DNA to a CEA aptamer was covalently conjugated to the aminated MSN, and then glucose (enzyme substrate) molecules were gated into the pore with the help of the aptamer. Glucose oxidase (GOD) and CdTe/CdSe QDs were coimmobilized on paper for the visual fluorescence signal output. Upon target CEA introduction in the detection cell, the analyte specifically reacted with the immobilized aptamer on the MSN to open the pore, thereby resulting in the glucose release. The released glucose was oxidized by the immobilized GOD on paper to produce gluconic acid and hydrogen peroxide, and the latter quenched the fluorescence of CdTe/CdSe QDs, which could be determined by the naked eye on a portable smartphone and a commercial fluorospectrometer. Under optimal conditions, the PAD-based sensing system enabled sensitive discrimination of target CEA against other biomarkers or proteins in a linear range of 0.05-20 ng mL-1 with a limit of detection of 6.7 pg mL-1 (ppt). In addition, our strategy displayed high specificity, good reproducibility, and acceptable accuracy for analyzing human serum specimens with a commercial human CEA ELISA kit. Importantly, this methodology offers promise for simple analysis of biological samples and is suitable for use in the mass production of miniaturized devices, thus opening new opportunities for protein diagnostics and biosecurity.


Assuntos
Técnicas Biossensoriais/métodos , Antígeno Carcinoembrionário/sangue , Papel , Pontos Quânticos/química , Dióxido de Silício/química , Espectrometria de Fluorescência/métodos , Aptâmeros de Nucleotídeos/química , Biomarcadores Tumorais/sangue , Biomarcadores Tumorais/química , Técnicas Biossensoriais/instrumentação , Antígeno Carcinoembrionário/química , Enzimas Imobilizadas/química , Glucose/química , Glucose Oxidase/química , Humanos , Limite de Detecção , Reprodutibilidade dos Testes , Smartphone , Espectrometria de Fluorescência/instrumentação
9.
Biosens Bioelectron ; 86: 14-19, 2016 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-27318105

RESUMO

A biodegradable material, zein, is proposed as a reagent delivery platform for biokits and biosensors based on alkaline phosphatase (ALP) activity/inhibition in the presence of phosphatase substrates. The immobilization and release of both the substrate and/or the active ALP, in a biodegradable and low-cost material such as zein, a prolamin from maize, and in combination with glycerol as plasticizer have been investigated. Three zein-based devices are proposed for several applications: (1) inorganic phosphorus estimation in water of different sources (river, lake, coastal water and tap water) with a detection limit of 0.2mg/L - compared to at least 1mg/L required by legislation, (2) estimation of ALP in saliva and (3) chlorpyrifos control in commercial preparations. The single-use kits developed are low cost, easy and fast to manufacture and are stable for at least 20 days at -20°C, so the zein film can preserve and deliver both the enzyme and substrates.


Assuntos
Implantes Absorvíveis , Fosfatase Alcalina/química , Colorimetria/instrumentação , Fósforo/análise , Kit de Reagentes para Diagnóstico , Zeína/química , Absorção Fisico-Química , Fosfatase Alcalina/administração & dosagem , Materiais Biocompatíveis/química , Técnicas Biossensoriais/instrumentação , Desenho de Equipamento , Análise de Falha de Equipamento , Plastificantes/química , Espectrometria de Fluorescência/instrumentação
10.
Biosens Bioelectron ; 77: 237-41, 2016 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-26409024

RESUMO

The novel, facile and universal aptamer-based methods for the highly sensitive and selective fluorescence detection of important biomolecules have attracted considerable interest. Here, we present a label-free aptasensor for adenosine triphosphate (ATP) detection in aqueous solutions by using an ultra-sensitive nucleic acid stain PicoGreen (PG) as a fluorescent indicator and core-shell Ag@SiO2 nanoparticles (NPs) as a metal-enhanced fluorescence (MEF) platform. In the presence of ATP, the complementary DNA (cDNA)/aptamer duplexes confined onto the Ag@SiO2 NPs surface can release their aptamers into the buffered solution, causing a significant reduction in fluorescence intensity. By virtue of the amplified fluorescence signal, this aptasensor toward ATP can achieve a detection limit of 14.2 nM with a wide linear range and exhibit a good assay performance in complex biological samples. This sensing approach is cost-effective and efficient because it avoids the fluorescence labeling process and the use of any enzymes. Hence, this method may offer an alternative tool for determining the concentrations of ATP in biochemical and biomedical research.


Assuntos
Trifosfato de Adenosina/análise , Aptâmeros de Nucleotídeos/química , Técnicas Biossensoriais/instrumentação , Nanopartículas Metálicas/química , Prata/química , Espectrometria de Fluorescência/instrumentação , Trifosfato de Adenosina/química , Desenho de Equipamento , Análise de Falha de Equipamento , Nanopartículas Metálicas/ultraestrutura , Dióxido de Silício/química , Coloração e Rotulagem
11.
Biosens Bioelectron ; 77: 995-1000, 2016 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-26547010

RESUMO

Developing direct and convenient methods for microRNAs (miRNAs) analysis is of great significance in understanding biological functions of miRNAs, and early diagnosis of cancers. We have developed a rapid, enzyme-free method for miRNA detection based on nanoparticle-assisted signal amplification coupling fluorescent metal nanoclusters as signal output. The proposed method involves two processes: target miRNA-mediated nanoparticle capture, which consists of magnetic microparticle (MMP) probe and CuO nanoparticle (NP) probe, and nanoparticle-mediated amplification for signal generation, which consists of fluorescent DNA-Cu/Ag nanocluster (NC) and 3-mercaptopropionic acid (MPA). In the presence of target miRNA, MMP probe and NP probe sandwich-capture the target miRNA via their respective complementary sequence. The resultant sandwich complex (MMP probe-miRNA-CuO NP probe) is separated using a magnetic field and further dissolved by acidolysis to turn CuO NP into a great amount of copper (II) ions (Cu(2+)). Cu(2+) could disrupt the interactions between thiol moiety of MPA and the fluorescent Cu/Ag NCs by preferentially reacting with MPA to form a disulfide compound as intermediate. By this way, the fluorescence emission of the DNA-Cu/Ag NCs in the presence of MPA increases upon the increasing concentration of Cu(2+), which is directly proportional to the amount of target miRNA. The proposed method allows quantitative detection of a liver-specific miR-221-5p in the range of 5 pM to 1000 pM with a detection limit of ~0.73 pM, and shows a good ability to discriminate single-base difference. Moreover, the detection assay can be applied to detect miRNA in cancerous cell lysates in excellent agreement with that from a commercial miRNA detection kit.


Assuntos
Cobre/química , DNA/química , DNA/genética , Nanopartículas de Magnetita/química , MicroRNAs/genética , Análise de Sequência de RNA/instrumentação , Sequência de Bases , Enzimas , Desenho de Equipamento , Análise de Falha de Equipamento , Nanopartículas de Magnetita/ultraestrutura , Nanopartículas Metálicas/química , Nanopartículas Metálicas/ultraestrutura , MicroRNAs/química , Dados de Sequência Molecular , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Espectrometria de Fluorescência/instrumentação
12.
Biosens Bioelectron ; 77: 525-9, 2016 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-26469729

RESUMO

A novel, highly sensitive assay for quantitative determination of DNA is developed based on hybridization chain reaction (HCR) amplification and the separation via core-shell Fe3O4 polydopamine nanoparticles (Fe3O4@PDA NPs). In this assay, two hairpin probes are designed, one of which is labeled with a 6-carboxyfluorescein (FAM). Without target DNA, auxiliary hairpin probes are stable in solution. However, when target DNA is present, the HCR between the two hairpins is triggered. The HCR products have sticky ends of 24 nt, which are much longer than the length of sticky ends of auxiliary hairpins (6 nt) and make the adsorption much easier by Fe3O4@PDA NPs. With the addition of Fe3O4@PDA NPs, HCR products could be adsorbed because of the strong interaction between their sticky ends and Fe3O4@PDA NPs. As a result, supernatant of the solution with target DNA emits weak fluorescence after separation by magnet, which is much lower than that of the blank solution. The detection limit of the proposed method is as low as 0.05 nM. And the sensing method exhibits high selectivity for the determination between perfectly complementary sequence and target with single base-pair mismatch. Importantly, the application of the sensor for DNA detection in human serum shows that the proposed method works well for biological samples.


Assuntos
DNA/genética , Hibridização in Situ Fluorescente/instrumentação , Nanopartículas de Magnetita/química , Técnicas de Amplificação de Ácido Nucleico/instrumentação , Análise de Sequência de DNA/instrumentação , Espectrometria de Fluorescência/instrumentação , Sequência de Bases , Técnicas Biossensoriais/instrumentação , DNA/análise , DNA/química , Enzimas , Desenho de Equipamento , Análise de Falha de Equipamento , Indóis/química , Nanopartículas de Magnetita/ultraestrutura , Dados de Sequência Molecular , Polímeros/química , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
13.
Biosens Bioelectron ; 74: 313-7, 2015 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-26148676

RESUMO

A triple-dimensional sensing chip is developed based on simultaneous utilization of fluorescence (FL), electrochemical (ECL) and mass-sensitivity (MS) properties of a novel nanocomposites. The sensing nanomaterial is composed of CdSe/ZnS quantum dots (QDs) and graphene through a one-pot room-temperature reverse microemulsion polymerization. Here, full integration of QDs and graphene on one chip provides triple-dimensional sensing signals. It enables quick and accurate discrimination of eight analytes in a "lab-on-a-nanomaterial" approach and notably improves the overall sensor performance. Unknown samples randomly taken from the training set at concentrations of 0.7 µM are successfully classified by principal component analysis (PCA) with accuracies of 92.5%, compared with the high performance liquid chromatography (HPLC) method. We further apply it to discriminate eight antioxidants from real oil samples, and explore the mechanism.


Assuntos
Antioxidantes/análise , Técnicas Biossensoriais/instrumentação , Condutometria/instrumentação , Pontos Quânticos , Óleo de Soja/química , Espectrometria de Fluorescência/instrumentação , Compostos de Cádmio/química , Misturas Complexas/análise , Desenho de Equipamento , Análise de Falha de Equipamento , Análise de Alimentos/instrumentação , Grafite/química , Compostos de Selênio/química , Compostos de Zinco/química
14.
Appl Spectrosc ; 68(7): 697-711, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-25014836

RESUMO

In excitation-emission fluorescence spectroscopy, the simultaneous quantitative prediction and qualitative resolution of mixtures of fluorophores using chemometrics is a major challenge because of the scattering and reabsorption effects (turbidity) presented mainly in biomaterials. The measured fluorescence spectra are distorted by multiple scattering and reabsorption events in the surrounding medium, thereby diminishing the performance of the commonly used three-way resolution methods such as parallel factor (PARAFAC) analysis or multivariate curve resolution-alternating least squares (MCR-ALS). In this work we show that spectral loadings and concentration profiles from model mixtures provided using PARAFAC and MCR-ALS are severely distorted by reabsorption and scattering phenomena, although both models fit rather well the experimental data in terms of percentage of the explained variance. The method to correct the fluorescence excitation-emission matrix (EEM) consisted in measuring the optical properties (absorption parameter µa , scattering parameter µs, and anisotropy factor g) of samples and calculating the corresponding transfer function by means of the Monte Carlo simulation method. By applying this transfer function to the measured EEM, it was possible to compensate for reabsorption and scattering effects and to restore the ideal EEM, i.e., the EEM that is due only to fluorophores, without distortions from the absorbers and scatterers that are present. The PARAFAC and MCR-ALS decomposition of the resulting ideal EEMs provided spectral loadings and concentration profiles that matched the true profiles.


Assuntos
Corantes Fluorescentes/análise , Espectrometria de Fluorescência/métodos , Absorção de Radiação , Algoritmos , Anisotropia , Simulação por Computador , Emulsões/química , Amarelo de Eosina-(YS)/análise , Fluoresceína/análise , Análise dos Mínimos Quadrados , Método de Monte Carlo , Fosfolipídeos/química , Quinolinas/química , Rodaminas/análise , Espalhamento de Radiação , Soluções , Óleo de Soja/química , Espectrometria de Fluorescência/instrumentação
15.
Anal Bioanal Chem ; 406(2): 537-48, 2014 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-24317515

RESUMO

This study describes a simple method for analyzing the abundance of mRNA molecules in a total DNA sample. Due to the dependence on the near-infrared fluorescence technique, this method is named near-infrared fluorescence gene expression detection (NIRF-GED). The procedure has three steps: (1) isolating total RNA from detected samples and reverse-transcription into cDNA with a biotin-labeled oligo dT; (2) hybridizing cDNA to oligonucleotide probes coupled to a 96-well microplate; and (3) detecting biotins with NIRF-labeled streptavidin. The method was evaluated by performing proof-in-concept detections of absolute and relative expressions of housekeeping and NF-κB target genes in HeLa cells. As a result, the absolute expression of three genes, Ccl20, Cxcl2, and Gapdh, in TNF-α-uninduced HeLa cells was determined with a standard curve constructed on the same microplate, and the relative expression of five genes, Ccl20, Cxcl2, Il-6, STAT5A, and Gapdh, in TNF-α-induced and -uninduced HeLa cells was measured by using NIRF-GED. The results were verified by quantitative PCR (qPCR) and DNA microarray detections. The biggest advantage of NIRF-GED over the current techniques lies in its independence of exponential or linear amplification of nucleic acids. Moreover, NIRF-GED also has several other benefits, including high sensitivity as low as several fmols, absolute quantification in the range of 9 to 147 fmols, low cDNA consumption similar to qPCR template, and the current medium throughput in 96-well microplate format and future high throughput in DNA microarray format. NIRF-GED thus provides a new tool for analyzing gene transcripts and other nucleic acid molecules.


Assuntos
Perfilação da Expressão Gênica/métodos , RNA Mensageiro/análise , Espectrometria de Fluorescência/métodos , Espectrofotometria Infravermelho/métodos , Biotina/química , Sondas de DNA/genética , Sondas de DNA/metabolismo , DNA Complementar/genética , DNA Complementar/metabolismo , Expressão Gênica/efeitos dos fármacos , Perfilação da Expressão Gênica/instrumentação , Genes Essenciais , Células HeLa , Humanos , NF-kappa B/genética , NF-kappa B/metabolismo , Oligodesoxirribonucleotídeos/genética , Oligodesoxirribonucleotídeos/metabolismo , Análise de Sequência com Séries de Oligonucleotídeos , RNA Mensageiro/genética , Transcrição Reversa , Espectrometria de Fluorescência/instrumentação , Espectrofotometria Infravermelho/instrumentação , Coloração e Rotulagem , Estreptavidina/química , Fator de Necrose Tumoral alfa/farmacologia
16.
J Biomed Opt ; 18(10): 107005, 2013 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-24126725

RESUMO

We have recently demonstrated a means for quantifying the absorption and scattering properties of biological tissue through multidiameter single-fiber reflectance (MDSFR) spectroscopy. These measurements can be used to correct single-fiber fluorescence (SFF) spectra for the influence of optical properties, enabling quantification of intrinsic fluorescence. In our previous work, we have used a series of pinholes to show that selective illumination and light collection using a coherent fiber bundle can simulate a single solid-core optical fiber with variable diameter for the purposes of MDSFR spectroscopy. Here, we describe the construction and validation of a clinical MDSFR/SFF spectroscopy system that avoids the limitations encountered with pinholes and free-space optics. During one measurement, the new system acquires reflectance spectra at the effective diameters of 200, 600, and 1000 µm, and a fluorescence spectrum at an effective diameter of 1000 µm. From these spectra, we measure the absolute absorption coefficient, µ(a), reduced scattering coefficient, µ'(s'), phase function parameter, γ, and intrinsic fluorescence, Qµ(a,x)(f), across the measured spectrum. We validate the system using Intralipid- and polystyrene sphere-based scattering phantoms, with and without the addition of the absorber Evans Blue. Finally, we demonstrate the combined MDSFR/SFF of phantoms with varying concentrations of Intralipid and fluorescein, wherein the scattering properties are measured by MDSFR and used to correct the SFF spectrum for accurate quantification of Qµ(a,x)(f).


Assuntos
Tecnologia de Fibra Óptica/instrumentação , Espectrometria de Fluorescência/métodos , Absorção , Emulsões , Fluoresceína , Modelos Teóricos , Fibras Ópticas , Imagens de Fantasmas , Fosfolipídeos , Reprodutibilidade dos Testes , Óleo de Soja , Espectrometria de Fluorescência/instrumentação
17.
Opt Express ; 21(25): 30874-85, 2013 Dec 16.
Artigo em Inglês | MEDLINE | ID: mdl-24514660

RESUMO

We perform a spectroscopic analysis of asphaltene in solution and in crude oil with the goal of designing an optical probe of asphaltene precipitation inside high-pressure cells. Quantitative analysis of steady-state spectroscopic data is employed to identify fluorescence and Raman contributions to the observed signals. Time-resolved fluorescence spectroscopy indicates that fluorescence lifetime can be used as a spectroscopic probe of asphaltene in crude oil. Quantitative confocal laser-scanning microscopy studies of asphaltene in n-heptane are used to calculate particle-size distributions as a function of time, both at the sample surface and asphaltene interior. The resulting precipitation kinetics is well described by stochastic numerical simulations of diffusion-limited aggregation. Based on these results, we present the design and construction of an apparatus to optically probe the in situ precipitation of asphaltene suitable for studies inside high pressure cells. Design considerations include the use of a spatial light modulator for aberration correction in microscopy measurements, together with the design of epi-fluorescence spectrometer, both fiber-based and for remote sensing fluorescence spectroscopy.


Assuntos
Microscopia/instrumentação , Petróleo/análise , Hidrocarbonetos Policíclicos Aromáticos/análise , Hidrocarbonetos Policíclicos Aromáticos/química , Espectrometria de Fluorescência/instrumentação , Análise Espectral Raman/instrumentação , Precipitação Química , Desenho de Equipamento , Análise de Falha de Equipamento , Cinética
18.
Biosens Bioelectron ; 41: 477-83, 2013 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-23083907

RESUMO

We synthesized 3D macroporous silicon through a simple electrochemical dissolution process and systematically estimated its protein adsorption and effect on fluorescence emission. Compared with conventional 2D polystyrene plate, the macroporous silicon showed a superior protein adsorption capacity and significant fluorescence quenching effect. We developed a 3D macroporous silicon-based adenosine assay system through the following fabrication process: streptavidin molecules that have been immobilized on the surface of macroporous silicon are attached with biotin-linked and adenosine-specific DNA aptamer, followed by hybridization between the attached aptamer and fluorescent chemical (carboxytetramethylrhodamine/CTMR) that is conjugated with a short complementary DNA sequence. In the absence of adenosine, the aptamer-CTMR complexes remain closely attached to the surface of porous silicon, hence fluorescence being significantly quenched. Upon binding to adenosine, the DNA aptamer is subject to structure switching that leads to dissociation of CTMR from DNA aptamer, and consequently the CTMR fluorescence is restored, indicating a simple one-step assay of adenosine. Compared to the conventional 2D PS and ZnO nanorods-based assays, adenosine at much lower (sub-micromolar) concentration was successfully detected through the 3D macroporous silicon-based assay. The three-dimensionally and densely immobilized aptamer probes and effective fluorescence quenching on the surface of macroporous silicon enables adenosine to be detected at lower levels. Although the adenosine detection is reported here as a proof-of-concept, the developed macroporous silicon-based simple one-step assay platform can be applied in general to fluorescence quenching -based detection of many other biomolecules.


Assuntos
Adenosina/análise , Aptâmeros de Nucleotídeos/química , Técnicas Biossensoriais/instrumentação , Silício/química , Espectrometria de Fluorescência/instrumentação , Adenosina/genética , Aptâmeros de Nucleotídeos/genética , Desenho de Equipamento , Análise de Falha de Equipamento , Porosidade , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
19.
Anal Sci ; 28(10): 947-52, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-23059989

RESUMO

This paper presents highly sensitive fluorescence detections of avidin and streptavidin using an optical interference mirror (OIM) slide consisting of a plane mirror covered with an optical interference layer. Compared with a common glass slide, the OIM slide can enhance the fluorescence from a dye by more than 100-fold. We fabricated an OIM slide by depositing an optical interference layer of Al(2)O(3) on an Ag mirror. To enhance the fluorescence maximally, the optimal thickness of the Al(2)O(3) layer was estimated from optical interference theory. For detections of protein, avidin/streptavidin labeled with fluorescein, Cy3, and Cy5 were detected with biotin immobilized on an OIM slide with the optimal Al(2)O(3) thickness. We achieved a sensitivity improvement of more than 50-fold, comparing with a glass slide. Such a high degree of improvement would be a significant contribution to further progress in biomedical research and medical diagnostics.


Assuntos
Avidina/análise , Técnicas Biossensoriais/instrumentação , Dispositivos Ópticos , Espectrometria de Fluorescência/instrumentação , Estreptavidina/análise , Adsorção , Óxido de Alumínio/química , Avidina/metabolismo , Biotina/química , Biotina/metabolismo , Carbocianinas/química , Vidro/química , Proteínas Imobilizadas/química , Proteínas Imobilizadas/metabolismo , Prata/química , Soluções , Estreptavidina/metabolismo
20.
Gend Med ; 9(1 Suppl): S25-35, 2012 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-22340638

RESUMO

BACKGROUND: Optical spectroscopy devices are being developed and tested for the screening and diagnosis of cancer and precancer in multiple organ sites. The studies reported here used a prototype of a device that uses white light, green-amber light at 545 nm, and violet light at 405 nm. Given that oral neoplasia is rare, the need for a device that increases the sensitivity of comprehensive white light oral screening is evident. Such a device, in the hands of dentists, family practitioners, otorhinolaryngologists, general surgeons, obstetrician gynecologists, and internists, could greatly increase the number of patients who have lesions detected in the precancerous phase. OBJECTIVES: The objective of this study was to present a case series of oral precancers and cancers that have been photographed during larger ongoing clinical trials. METHODS: Over 300 patients were measured at 2 clinical sites that are comprehensive cancer centers and a faculty practice associated with a major dental school. Each site is conducting independent research on the sensitivity and specificity of several optical technologies for the diagnosis of oral neoplasia. The cases presented in this case series were taken from the larger database of images from the clinical trials using the aforementioned device. Optical spectroscopy was performed and biopsies obtained from all sites measured, representing abnormal and normal areas on comprehensive white light examination and after use of the fluorescence and reflectance spectroscopy device. The gold standard of test accuracy was the histologic report of biopsies read by the study histopathologists at each of the 3 study sites. RESULTS: Comprehensive white light examination showed some lesions; however, the addition of a fluorescence image and a selected reflectance wavelength was helpful in identifying other characteristics of the lesions. The addition of the violet light-induced fluorescence excited at 405 nm provided an additional view of both the stromal neovasculature of the lesions and the stromal changes associated with lesion growth that were biologically indicative of stromal breakdown. The addition of 545 nm green-amber light reflectance increased the view of the keratinized image and allowed the abnormal surface vasculature to be more prominent. CONCLUSIONS: Optical spectroscopy is a promising technology for the diagnosis of oral neoplasia. The conclusion of several ongoing clinical trials and an eventual randomized Phase III clinical trial will provide definitive findings that sensitivity is or is not increased over comprehensive white light examination.


Assuntos
Neoplasias Bucais/diagnóstico , Lesões Pré-Cancerosas/diagnóstico , Espectrometria de Fluorescência , Carcinoma in Situ/diagnóstico , Humanos , Neoplasias Palatinas/diagnóstico , Sensibilidade e Especificidade , Espectrometria de Fluorescência/instrumentação
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