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1.
Nat Commun ; 12(1): 4431, 2021 07 21.
Artigo em Inglês | MEDLINE | ID: mdl-34290234

RESUMO

Experiments showed that biodiversity increases grassland productivity and nutrient exploitation, potentially reducing fertiliser needs. Enhancing biodiversity could improve P-use efficiency of grasslands, which is beneficial given that rock-derived P fertilisers are expected to become scarce in the future. Here, we show in a biodiversity experiment that more diverse plant communities were able to exploit P resources more completely than less diverse ones. In the agricultural grasslands that we studied, management effects either overruled or modified the driving role of plant diversity observed in the biodiversity experiment. Nevertheless, we show that greater above- (plants) and belowground (mycorrhizal fungi) biodiversity contributed to tightening the P cycle in agricultural grasslands, as reduced management intensity and the associated increased biodiversity fostered the exploitation of P resources. Our results demonstrate that promoting a high above- and belowground biodiversity has ecological (biodiversity protection) and economical (fertiliser savings) benefits. Such win-win situations for farmers and biodiversity are crucial to convince farmers of the benefits of biodiversity and thus counteract global biodiversity loss.


Assuntos
Agricultura/métodos , Biodiversidade , Pradaria , Fósforo/metabolismo , Agricultura/economia , Biomassa , Fertilizantes/economia , Análise de Classes Latentes , Micorrizas/classificação , Micorrizas/metabolismo , Fósforo/análise , Fósforo/economia , Plantas/classificação , Plantas/metabolismo , Plantas/microbiologia , Solo/química , Microbiologia do Solo
2.
Appl Environ Microbiol ; 87(17): e0034921, 2021 08 11.
Artigo em Inglês | MEDLINE | ID: mdl-34160265

RESUMO

Arbuscular mycorrhizal fungi (AMF) provide essential nutrients to crops and are critically impacted by fertilization in agricultural ecosystems. Understanding shifts in AMF communities in and around crop roots under different fertilization regimes can provide important lessons for improving agricultural production and sustainability. Here, we compared the responses of AMF communities in the rhizosphere (RS) and root endosphere (ES) of wheat (Triticum aestivum) to different fertilization treatments, nonfertilization (control), mineral fertilization only (NPK), mineral fertilization plus wheat straw (NPKS), and mineral fertilization plus cow manure (NPKM). We employed high-throughput amplicon sequencing and investigated the diversity, community composition, and network structure of AMF communities to assess their responses to fertilization. Our results elucidated that AMF communities in the RS and ES respond differently to fertilization schemes. Long-term NPK application decreased the RS AMF alpha diversity significantly, whereas additional organic amendments (straw or manure) had no effect. In contrast, NPK fertilization increased the ES AMF alpha diversity significantly, while additional organic amendments decreased it significantly. The effect of different fertilization schemes on AMF network complexity in the RS and ES were similar to their effects on alpha diversity. Changes to AMF communities in the RS and ES correlated mainly with the pH and phosphorus level of the rhizosphere soil under long-term inorganic and organic fertilization regimes. We suggest that the AMF community in the roots should be given more consideration when studying the effects of fertilization regimes on AMF in agroecosystems. IMPORTANCE Arbuscular mycorrhizal fungi are an integral component of rhizospheres, bridging the soil and plant systems and are highly sensitive to fertilization. However, surprisingly little is known about how the response differs between the roots and the surrounding soil. Decreasing arbuscular mycorrhizal fungal diversity under fertilization has been reported, implying a potential reduction in the mutualism between plants and arbuscular mycorrhizal fungi. However, we found opposing responses to long-term fertilization managements of arbuscular mycorrhizal fungi in the wheat roots and rhizosphere soil. These results suggested that changes in the arbuscular mycorrhizal fungal community in soils do not reflect those in the roots, highlighting that the root arbuscular mycorrhizal fungal community is pertinent to understand arbuscular mycorrhizal fungi and their crop hosts' responses to anthropogenic influences.


Assuntos
Fertilizantes/análise , Fungos/isolamento & purificação , Micobioma , Micorrizas/isolamento & purificação , Triticum/crescimento & desenvolvimento , Fungos/classificação , Fungos/genética , Esterco/análise , Minerais/análise , Minerais/metabolismo , Micorrizas/classificação , Micorrizas/genética , Fósforo/análise , Fósforo/metabolismo , Raízes de Plantas/metabolismo , Raízes de Plantas/microbiologia , Rizosfera , Solo/química , Microbiologia do Solo , Triticum/metabolismo
3.
Sci Data ; 7(1): 403, 2020 11 19.
Artigo em Inglês | MEDLINE | ID: mdl-33214562

RESUMO

Grazing and mowing are two dominant management regimes used in grasslands. Although many studies have focused on the effects of grazing intensity on plant community structure, far fewer test how grazing impacts the soil microbial community. Furthermore, the effects of long-term grazing and mowing on plant and microbial community structure are poorly understood. To elucidate how these management regimes affect plant and microbial communities, we collected data from 280 quadrats in a semiarid steppe after 12-year of grazing and mowing treatments. We measured plant species abundance, height, coverage, plant species diversity, microbial biomass, and microbial community composition (G+ and G- bacteria; arbuscular mycorrhizal and saprotrophic fungi; G+/G- and Fungi/Bacteria). In addition, we determined the soil's physical and chemical properties, including soil hardness, moisture, pH, organic carbon, total nitrogen, and total phosphorus. This is a long-term and multifactorial dataset with plant, soil, and microbial attributes which can be used to answer questions regarding the mechanisms of sustainable grassland management in terms of plant and microbial community structure.


Assuntos
Pradaria , Herbivoria , Microbiota , Plantas/classificação , Microbiologia do Solo , Bactérias/classificação , Carbono/análise , Micorrizas/classificação , Nitrogênio/análise , Fósforo/análise , Solo/química
4.
BMC Microbiol ; 20(1): 335, 2020 11 03.
Artigo em Inglês | MEDLINE | ID: mdl-33143657

RESUMO

BACKGROUND: Ferula sinkiangensis is an increasingly endangered medicinal plant. Arbuscular mycorrhiza fungi (AMF) are symbiotic microorganisms that live in the soil wherein they enhance nutrient uptake, stress resistance, and pathogen defense in host plants. While such AMF have the potential to contribute to the cultivation of Ferula sinkiangensis, the composition of AMF communities associated with Ferula sinkiangensis and the relationship between these fungi and other pertinent abiotic factors still remains to be clarified. RESULTS: Herein, we collected rhizosphere and surrounding soil samples at a range of depths (0-20, 20-40, and 40-60 cm) and a range of slope positions (bottom, middle, top). These samples were then subjected to analyses of soil physicochemical properties and high-throughput sequencing (Illumina MiSeq). We determined that Glomus and Diversispora species were highly enriched in all samples. We further found that AMF diversity and richness varied significantly as a function of slope position, with this variation primarily being tied to differences in relative Glomus and Diversispora abundance. In contrast, no significant relationship was observed between soil depth and overall AMF composition, although some AMF species were found to be sensitive to soil depth. Many factors significantly affected AMF community composition, including organic matter content, total nitrogen, total potassium, ammonium nitrogen, nitrate nitrogen, available potassium, total dissolvable salt levels, pH, soil water content, and slope position. We further determined that Shannon diversity index values in these communities were positively correlated with total phosphorus, nitrate-nitrogen levels, and pH values (P < 0.05), whereas total phosphorus, total dissolvable salt levels, and pH were positively correlated with Chao1 values (P < 0.05). CONCLUSION: In summary, our data revealed that Glomus and Diversispora are key AMF genera found within Ferula sinkiangensis rhizosphere soil. These fungi are closely associated with specific environmental and soil physicochemical properties, and these soil sample properties also differed significantly as a function of slope position (P < 0.05). Together, our results provide new insights regarding the relationship between AMF species and Ferula sinkiangensis, offering a theoretical basis for further studies of their development.


Assuntos
Ferula/microbiologia , Micobioma , Micorrizas/isolamento & purificação , Rizosfera , Biodiversidade , DNA Fúngico/genética , Glomeromycota/classificação , Glomeromycota/genética , Glomeromycota/isolamento & purificação , Sequenciamento de Nucleotídeos em Larga Escala , Micorrizas/classificação , Micorrizas/genética , Plantas Medicinais/microbiologia , Análise de Sequência de DNA , Solo/química , Microbiologia do Solo
5.
FEMS Microbiol Lett ; 367(14)2020 07 01.
Artigo em Inglês | MEDLINE | ID: mdl-32648900

RESUMO

Arbuscular mycorrhizal fungi (AMF) are a key soil functional group, with an important potential to increase crop productivity and sustainable agriculture including food security. However, there is clear evidence that land uses, crop rotations and soil features affect the AMF diversity and their community functioning in many agroecosystems. So far, the information related to AMF biodiversity in ecosystems like the Argentinean Puna, an arid high plateau where plants experience high abiotic stresses, is still scarce. In this work, we investigated morphological and molecular AMF diversity in soils of native corn, bean and native potato Andean crops, under a familiar land use, in Chaupi Rodeo (Jujuy, Argentina), without agrochemical supplements but with different histories of crop rotation. Our results showed that AMF morphological diversity was not only high and variable among the three different crop soils but also complemented by Illumina MiSeq data. The multivariate analyses highlighted that total fungal diversity is significantly affected by the preceding crop plants and the rotation histories, more than from the present crop species, while AMF communities are significantly affected by preceding crop only in combination with the effect of nitrogen and calcium soil concentration. This knowledge will give useful information on appropriate familiar farming.


Assuntos
Biodiversidade , Fungos/isolamento & purificação , Micorrizas/isolamento & purificação , Microbiologia do Solo , Argentina , Cálcio/análise , Cálcio/metabolismo , Produção Agrícola , Produtos Agrícolas/crescimento & desenvolvimento , Produtos Agrícolas/metabolismo , Produtos Agrícolas/microbiologia , Ecossistema , Fungos/classificação , Fungos/genética , Fungos/crescimento & desenvolvimento , Micobioma , Micorrizas/classificação , Micorrizas/genética , Micorrizas/crescimento & desenvolvimento , Nitrogênio/análise , Nitrogênio/metabolismo , Solo/química
6.
Ecotoxicol Environ Saf ; 197: 110563, 2020 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-32278824

RESUMO

Sodium sulfide (Na2S) is usually used as an amendment in industrial sewage treatment. To evaluate the effects of Na2S on the growth of Robinia pseudoacacia (black locust), heavy metal immobilization, and soil microbial activity, the R. pseudoacacia biomass and nutrient content and the soil heavy metal bioavailability, enzyme activity, and arbuscular mycorrhizal (AM) fungal community were measured by a single-factor pot experiment. The Pb-Zn-contaminated soil was collected from a Pb-Zn mine that had been remediated by R. pseudoacacia for five years. Three pollution levels (unpolluted, mildly polluted, and severely polluted) were evaluated by the pollution load index. Na2S application increased the shoot biomass under severe and mild contamination. In soil, Na2S application decreased the bioavailable Pb and Zn contents under severe and mild contamination, which resulted in a decrease in the Pb and Zn content in R. pseudoacacia. However, Na2S application did not affect the total Pb content per plant and enhanced the total Zn content per plant because of the higher biomass of the plants under Na2S application. Increased phosphatase activity and increased available phosphorous content may promote the uptake of phosphorus in R. pseudoacacia. Moreover, Na2S application is beneficial to the diversity of AM fungi under mild and severe pollution. Overall, Na2S application has great potential for enhancing soil heavy metal immobilization, enhancing soil microbial activity, and improving the growth of R. pseudoacacia in polluted soils. Therefore, Na2S is suitable for use in Pb-Zn remediation to ameliorate environmental heavy metal pollution.


Assuntos
Metais Pesados/farmacocinética , Robinia/crescimento & desenvolvimento , Microbiologia do Solo , Poluentes do Solo/farmacocinética , Sulfetos/farmacologia , Biodegradação Ambiental , Disponibilidade Biológica , Biomassa , Chumbo/farmacocinética , Micorrizas/classificação , Micorrizas/efeitos dos fármacos , Fósforo/metabolismo , Robinia/efeitos dos fármacos , Robinia/metabolismo , Robinia/microbiologia , Zinco/farmacocinética
7.
Microbiologyopen ; 9(1): e00920, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31397116

RESUMO

Agricultural fertilization is used extensively to increase soil fertility and maximize crop yield. Despite numerous studies on how fertilization influences plant and bacterial communities, little is known about the roles of long-term application of different fertilizers in shaping arbuscular mycorrhizal fungal (AMF) community structures in a comparative manner. The response of AMF community to 28 years of chemical and organic fertilization was investigated using the Illumina Mi-Seq platform. Soil AMF community composition showed significant and differential responses to long-term fertilization. Changes in available phosphorus (AP) content were the primary driver shaping AMF community composition. Chemical fertilization significantly decreased AMF alpha-diversity, whereas the alpha-diversity remained equally high in organic fertilization treatment as in the control. In addition, soil AMF alpha-diversity was negatively and positively correlated with elevated soil nutrient level following chemical and organic fertilization, respectively. Plants could directly acquire sufficient nutrients without their AMF partners after chemical fertilization, while plants might rely on AMF to facilitate the transformation of organic matter following organic fertilization, indicating that chemical fertilization might reduce the reliance of plants on AMF symbioses while organic fertilization strengthened the symbiotic relationship between plants and their AMF partners in agricultural ecosystems. This study demonstrated that AMF communities responded differently to long-term chemical and organic fertilization, indicating that organic fertilization might activate belowground AMF function to maintain soil nutrients and benefit the sustainable development of agriculture.


Assuntos
Fertilizantes/análise , Micobioma/genética , Micorrizas/classificação , Micorrizas/crescimento & desenvolvimento , Raízes de Plantas/microbiologia , China , Ecossistema , Fertilizantes/microbiologia , Sequenciamento de Nucleotídeos em Larga Escala , Micorrizas/genética , Fósforo/análise , Plantas/microbiologia , Solo/química , Microbiologia do Solo
8.
Microb Ecol ; 79(1): 21-29, 2020 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-31218384

RESUMO

Phosphorus (P) is an essential nutrient with low bioavailability in soils for plant growth. The use of P solubilization fungi (PSF) has arisen as an eco-friendly strategy to increase this nutrient's bioavailability. The effect of PSF inoculation and its combination with P-transporting organisms (arbuscular mycorrhizal fungi, AMF) on plant growth has been previously studied. However, these studies did not evaluate the combined effect of PSF and AMF inoculation on plant growth, symbiosis, and soil quality. Therefore, the aim of this study is to assess the impact of PSF on the AMF-wheat symbiosis establishment and efficiency, considering the effect on plant growth and soil quality. We performed a greenhouse experiment with wheat under different treatments (+/-AMF: Rhizophagus irregularis; +/-PSF strains: Talaromyces flavus, T. helicus L7B, T. helicus N24, and T. diversus) and measured plant growth, AMF root colonization, symbiotic efficiency, and soil quality indicators. No interaction between PSF and R. irregularis was found in wheat growth, showcasing that their combination is not better than single inoculation. T. helicus strains did not interfere with the AMF-wheat symbiosis establishment, while T. diversus and T. flavus decreased it. The symbiotic efficiency was increased by T. flavus and T. helicus N24, and unchanged with T. helicus L7B and T. diversus inoculation. The soil quality indicators were higher with microbial co-inoculation, particularly the alkaline phosphatases parameter, showing the beneficial role of fungi in soil. This work highlights the importance of microbial interactions in the rhizosphere for crop sustainability and soil quality improvement, assessing the effects of PSF on AMF-wheat symbiosis.


Assuntos
Inoculantes Agrícolas/fisiologia , Glomeromycota/fisiologia , Micorrizas/fisiologia , Fósforo/metabolismo , Solo/química , Simbiose , Triticum/microbiologia , Inoculantes Agrícolas/classificação , Glomeromycota/classificação , Micorrizas/classificação , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/microbiologia , Raízes de Plantas/fisiologia , Rizosfera , Microbiologia do Solo , Triticum/crescimento & desenvolvimento , Triticum/fisiologia
9.
Braz J Microbiol ; 50(4): 1011-1020, 2019 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-31396863

RESUMO

Positive feedback between arbuscular mycorrhizal fungal (AMF) and vascular plants can contribute to plant species establishment, but how this feedback affects plant invasion by Prosopis juliflora SW. (DC.), or resistance to invasion by Mimosa tenuiflora (Willd.) Poir in Brazilian semi-arid region is not well known. In this work, we tested how modified and native AMF communities affect the establishment of P. juliflora and M. tenuiflora plants. We examined the effects of inoculation with modified and native AMF communities on number of AMF spores, root colonization, number of N-fixing nodules, plant dry biomass, plant phosphorous concentration, and plant responsiveness to mycorrhizas of P. juliflora and M. tenuiflora. We found that the modified AMF community enhanced the root colonization, plant dry biomass, and plant phosphorous concentration of invasive P. juliflora, whereas native AMF enhanced M. tenuiflora. Our results demonstrate that the invasive P. juliflora alters soil AMF community composition, and this change generates positive feedback to the invasive P. juliflora itself and decreases AMF associations with native M. tenuiflora.


Assuntos
Fabaceae/microbiologia , Fungos/isolamento & purificação , Mimosa/microbiologia , Micorrizas/isolamento & purificação , Biodiversidade , Brasil , Fabaceae/crescimento & desenvolvimento , Fungos/classificação , Fungos/genética , Fungos/metabolismo , Espécies Introduzidas , Mimosa/crescimento & desenvolvimento , Micorrizas/classificação , Micorrizas/genética , Micorrizas/metabolismo , Fósforo/metabolismo , Raízes de Plantas/microbiologia , Solo/química , Microbiologia do Solo , Esporos Fúngicos/classificação , Esporos Fúngicos/crescimento & desenvolvimento , Esporos Fúngicos/isolamento & purificação , Esporos Fúngicos/metabolismo
10.
Biol Rev Camb Philos Soc ; 94(5): 1857-1880, 2019 10.
Artigo em Inglês | MEDLINE | ID: mdl-31270944

RESUMO

Mycorrhizal fungi benefit plants by improved mineral nutrition and protection against stress, yet information about fundamental differences among mycorrhizal types in fungi and trees and their relative importance in biogeochemical processes is only beginning to accumulate. We critically review and synthesize the ecophysiological differences in ectomycorrhizal, ericoid mycorrhizal and arbuscular mycorrhizal symbioses and the effect of these mycorrhizal types on soil processes from local to global scales. We demonstrate that guilds of mycorrhizal fungi display substantial differences in genome-encoded capacity for mineral nutrition, particularly acquisition of nitrogen and phosphorus from organic material. Mycorrhizal associations alter the trade-off between allocation to roots or mycelium, ecophysiological traits such as root exudation, weathering, enzyme production, plant protection, and community assembly as well as response to climate change. Mycorrhizal types exhibit differential effects on ecosystem carbon and nutrient cycling that affect global elemental fluxes and may mediate biome shifts in response to global change. We also note that most studies performed to date have not been properly replicated and collectively suffer from strong geographical sampling bias towards temperate biomes. We advocate that combining carefully replicated field experiments and controlled laboratory experiments with isotope labelling and -omics techniques offers great promise towards understanding differences in ecophysiology and ecosystem services among mycorrhizal types.


Assuntos
Micorrizas/classificação , Micorrizas/fisiologia , Plantas/microbiologia , Microbiologia do Solo , Solo/normas , Simbiose , Carbono/metabolismo , Ecossistema , Nitrogênio/metabolismo , Fósforo/metabolismo , Fenômenos Fisiológicos Vegetais , Raízes de Plantas/microbiologia , Solo/química , Estresse Fisiológico/fisiologia , Árvores/microbiologia , Árvores/fisiologia
11.
ISME J ; 13(7): 1722-1736, 2019 07.
Artigo em Inglês | MEDLINE | ID: mdl-30850707

RESUMO

Root-associated microbes play a key role in plant performance and productivity, making them important players in agroecosystems. So far, very few studies have assessed the impact of different farming systems on the root microbiota and it is still unclear whether agricultural intensification influences the structure and complexity of microbial communities. We investigated the impact of conventional, no-till, and organic farming on wheat root fungal communities using PacBio SMRT sequencing on samples collected from 60 farmlands in Switzerland. Organic farming harbored a much more complex fungal network with significantly higher connectivity than conventional and no-till farming systems. The abundance of keystone taxa was the highest under organic farming where agricultural intensification was the lowest. We also found a strong negative association (R2 = 0.366; P < 0.0001) between agricultural intensification and root fungal network connectivity. The occurrence of keystone taxa was best explained by soil phosphorus levels, bulk density, pH, and mycorrhizal colonization. The majority of keystone taxa are known to form arbuscular mycorrhizal associations with plants and belong to the orders Glomerales, Paraglomerales, and Diversisporales. Supporting this, the abundance of mycorrhizal fungi in roots and soils was also significantly higher under organic farming. To our knowledge, this is the first study to report mycorrhizal keystone taxa for agroecosystems, and we demonstrate that agricultural intensification reduces network complexity and the abundance of keystone taxa in the root microbiome.


Assuntos
Glomeromycota/classificação , Micorrizas/classificação , Raízes de Plantas/microbiologia , Microbiologia do Solo , Agricultura , Glomeromycota/genética , Glomeromycota/isolamento & purificação , Consórcios Microbianos , Micorrizas/genética , Micorrizas/isolamento & purificação , Fósforo/metabolismo , Solo/química , Suíça , Triticum/microbiologia
12.
Microbiologyopen ; 8(4): e00703, 2019 04.
Artigo em Inglês | MEDLINE | ID: mdl-30117306

RESUMO

Arbuscular mycorrhizal fungi (AMF) are worldwide distributed plant symbionts. However, their occurrence in hydrocarbon-polluted environments is less investigated, although specific communities may be present with possible interest for remediation strategies. Here, we investigated the AMF community composition associated with the roots of diverse plant species naturally recolonizing a weathered crude oil pond in the Amazon region of Ecuador. Next generation 454 GS-Junior sequencing of an 800 bp LSU rRNA gene PCR amplicon was used. PCR amplicons were affiliated to a maximum-likelihood phylogenetic tree computed from 1.5 kb AMF reference sequences. A high throughput phylogenetic annotation approach, using an evolutionary placement algorithm (EPA) allowed the characterization of sequences to the species level. Fifteen species were detected. Acaulospora species were identified as dominant colonizers, with 73% of relative read abundance, Archaeospora (19.6%) and several genera from the Glomeraceae (Rhizophagus, Glomus macrocarpum-like, Sclerocystis, Dominikia and Kamienskia) were also detected. Although, a diverse community belonging to Glomeraceae was revealed, they represented <10% of the relative abundance in the Pond. Seventy five % of the species could not be identified, suggesting possible new species associated with roots of plants under highly hydrocarbon-polluted conditions.


Assuntos
Fungos/isolamento & purificação , Micorrizas/isolamento & purificação , Micorrizas/metabolismo , Petróleo/análise , Plantas/microbiologia , Poluentes do Solo/análise , Equador , Fungos/classificação , Fungos/genética , Fungos/metabolismo , Hidrocarbonetos/análise , Hidrocarbonetos/metabolismo , Micorrizas/classificação , Micorrizas/genética , Petróleo/metabolismo , Filogenia , Desenvolvimento Vegetal , Raízes de Plantas/microbiologia , Solo/química , Microbiologia do Solo , Poluentes do Solo/metabolismo
13.
Environ Pollut ; 246: 148-162, 2019 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-30543941

RESUMO

Humans have dramatically increased atmospheric nitrogen (N) deposition globally. At the coarsest resolution, N deposition is correlated with shifts from ectomycorrhizal (EcM) to arbuscular mycorrhizal (AM) tree dominance. At finer resolution, ectomycorrhizal fungal (EcMF) and arbuscular mycorrhizal fungal (AMF) communities respond strongly to long-term N deposition with the disappearance of key taxa. Conifer-associated EcMF are more sensitive than other EcMF, with current estimates of critical loads at 5-6 kg ha-1 yr-1 for the former and 10-20 kg ha-1 yr-1 for the latter. Where loads are exceeded, strong plant-soil and microbe-soil feedbacks may slow recovery rates after abatement of N deposition. Critical loads for AMF and tropical EcMF require additional study. In general, the responses of EcMF to N deposition are better understood than those of AMF because of methodological tractability. Functional consequences of EcMF community change are linked to decreases by fungi with medium-distance exploration strategies, hydrophobic walls, proteolytic capacity, and perhaps peroxidases for acquiring N from soil organic matter. These functional losses may contribute to declines in forest floor decomposition under N deposition. For AMF, limited capacity to directly access complexed organic N may reduce functional consequences, but research is needed to test this hypothesis. Mycorrhizal biomass often declines with N deposition, but the relative contributions of alternate mechanisms for this decline (lower C supply, higher C cost, physiological stress by N) have not been quantified. Furthermore, fungal biomass and functional responses to N inputs probably depend on ecosystem P status, yet how N deposition-induced P limitation interacts with belowground C flux and mycorrhizal community structure and function is still unclear. Current 'omic analyses indicate potential functional differences among fungal lineages and should be integrated with studies of physiology, host nutrition, growth and health, fungal and plant community structure, and ecosystem processes.


Assuntos
Florestas , Micorrizas/classificação , Micorrizas/fisiologia , Nitrogênio/metabolismo , Microbiologia do Solo , Biomassa , Carbono/metabolismo , Ecossistema , Micorrizas/crescimento & desenvolvimento , Micorrizas/metabolismo , Fósforo/metabolismo , Solo/química , Árvores/microbiologia
14.
Microbes Environ ; 34(1): 23-32, 2019 Mar 30.
Artigo em Inglês | MEDLINE | ID: mdl-30584188

RESUMO

Arbuscular mycorrhizal (AM) fungi are important members of the root microbiome and may be used as biofertilizers for sustainable agriculture. To elucidate the impact of AM fungal inoculation on indigenous root microbial communities, we used high-throughput sequencing and an analytical pipeline providing fixed operational taxonomic units (OTUs) as an output to investigate the bacterial and fungal communities of roots treated with a commercial AM fungal inoculum in six agricultural fields. AM fungal inoculation significantly influenced the root microbial community structure in all fields. Inoculation changed the abundance of indigenous AM fungi and other fungal members in a field-dependent manner. Inoculation consistently enriched several bacterial OTUs by changing the abundance of indigenous bacteria and introducing new bacteria. Some inoculum-associated bacteria closely interacted with the introduced AM fungi, some of which belonged to the genera Burkholderia, Cellulomonas, Microbacterium, Sphingomonas, and Streptomyces and may be candidate mycorrhizospheric bacteria that contribute to the establishment and/or function of the introduced AM fungi. Inoculated AM fungi also co-occurred with several indigenous bacteria with putative beneficial traits, suggesting that inoculated AM fungi may recruit specific taxa to confer better plant performance. The bacterial families Methylobacteriaceae, Acetobacteraceae, Armatimonadaceae, and Alicyclobacillaceae were consistently reduced by the inoculation, possibly due to changes in the host plant status caused by the inoculum. To the best of our knowledge, this is the first large-scale study to investigate interactions between AM fungal inoculation and indigenous root microbial communities in agricultural fields.


Assuntos
Agricultura , Microbiota , Micorrizas/fisiologia , Raízes de Plantas/microbiologia , Microbiologia do Solo , Bactérias/classificação , Bactérias/genética , Bactérias/crescimento & desenvolvimento , Bactérias/isolamento & purificação , Fungos/classificação , Fungos/genética , Fungos/crescimento & desenvolvimento , Fungos/isolamento & purificação , Micorrizas/classificação , Cebolas/crescimento & desenvolvimento , Cebolas/microbiologia , Fósforo/química , RNA Ribossômico 16S/genética , Solo/química , Simbiose
15.
J Microbiol ; 56(1): 42-48, 2018 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-29299845

RESUMO

All orchids maintain an obligate relationship with mycorrhizal symbionts during seed germination. In most cases, germination-enhancing fungi have been isolated from roots of mature plants for conservation and cultivation purposes. To understand the germination biology of Dendrobium devonianum, an over-collected medicinal orchid, the seeds of D. devonianum were inoculated with a fungal strain (FDd1) isolated from naturally occurring protocorms of D. devonianum and two other germination-enhancing fungal strains (FDaI7 and FCb4) from D. aphyllum and Cymbidium mannii, respectively. The fungal strain was isolated from five protocorms of D. devonianum and identified as a species of the genus Epulorhiza. In germination trials, treatments with all of the three fungal strains showed a significant promoting effect on seed germination and protocorm formation, compared with the control treatment (no inoculation). However, FDd1 fungal strain showed the greatest effectiveness followed by FDaI7 and FCb4. For all inoculation and control treatments, seeds developed to protocorms regardless of the presence of illumination, whereas protocorms did not develop to seedlings unless illumination was provided. The results of our manipulative experiments confirmed the hypothesis that mycorrhizae associated with orchid seedlings are highly host-specific, and the degree of specificity may be life stagespecific under in vitro conditions. The specific mycorrhizal symbionts from protocorms can enhance restoration efforts and the conservation of orchids such as D. devonianum.


Assuntos
Basidiomycota/isolamento & purificação , Micorrizas/isolamento & purificação , Orchidaceae/microbiologia , Sementes/crescimento & desenvolvimento , Simbiose , Basidiomycota/classificação , Basidiomycota/genética , Basidiomycota/fisiologia , Germinação , Especificidade de Hospedeiro , Micorrizas/classificação , Micorrizas/genética , Micorrizas/fisiologia , Orchidaceae/crescimento & desenvolvimento , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/microbiologia , Plantas Medicinais/crescimento & desenvolvimento , Plantas Medicinais/microbiologia , Plântula/crescimento & desenvolvimento , Plântula/microbiologia , Sementes/microbiologia
16.
Microb Ecol ; 76(1): 102-112, 2018 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-28560606

RESUMO

Plant-soil feedback is recognized as the mutual interaction between plants and soil microorganisms, but its role on the biological invasion of the Brazilian tropical seasonal dry forest by invasive plants still remains unclear. Here, we analyzed and compared the arbuscular mycorrhizal fungi (AMF) communities and soil characteristics from the root zone of invasive and native plants, and tested how these AMF communities affect the development of four invasive plant species (Cryptostegia madagascariensis, Parkinsonia aculeata, Prosopis juliflora, and Sesbania virgata). Our field sampling revealed that AMF diversity and frequency of the Order Diversisporales were positively correlated with the root zone of the native plants, whereas AMF dominance and frequency of the Order Glomerales were positively correlated with the root zone of invasive plants. We grew the invasive plants in soil inoculated with AMF species from the root zone of invasive (I changed) and native (I unaltered) plant species. We also performed a third treatment with sterilized soil inoculum (control). We examined the effects of these three AMF inoculums on plant dry biomass, root colonization, plant phosphorous concentration, and plant responsiveness to mycorrhizas. We found that I unaltered and I changed promoted the growth of all invasive plants and led to a higher plant dry biomass, mycorrhizal colonization, and P uptake than control, but I changed showed better results on these variables than I unaltered. For plant responsiveness to mycorrhizas and fungal inoculum effect on plant P concentration, we found positive feedback between changed-AMF community (I changed) and three of the studied invasive plants: C. madagascariensis, P. aculeata, and S. virgata.


Assuntos
Espécies Introduzidas , Micorrizas/fisiologia , Desenvolvimento Vegetal , Plantas/microbiologia , Microbiologia do Solo , Solo/química , Apocynaceae/crescimento & desenvolvimento , Biodiversidade , Biomassa , Brasil , Fabaceae/crescimento & desenvolvimento , Florestas , Glomeromycota/fisiologia , Micorrizas/classificação , Micorrizas/crescimento & desenvolvimento , Fósforo/metabolismo , Raízes de Plantas/microbiologia , Prosopis/crescimento & desenvolvimento , Estações do Ano
17.
FEMS Microbiol Ecol ; 93(9)2017 09 01.
Artigo em Inglês | MEDLINE | ID: mdl-28922802

RESUMO

Arbuscular mycorrhizal (AM) fungi provide a range of functions in natural and managed ecosystems. However, the trajectory of AM fungal diversity after land degradation is poorly known. We studied the succession of AM fungi along an agricultural recultivation chronosequence after open-cast mining near Cologne, Germany. We used high-throughput sequencing of the large-subunit ribosomal RNA genes to characterize the soil AM fungal communities of 10 agricultural fields spanning 52 years of recultivation. During three years, soils are recultivated with a legume, and then converted to agriculture to be later returned to local farmers implementing conventional agriculture. Our data reveal a quick and strong recovery of AM fungal richness after a few years of recultivation, but also a rapid decline following years of conventional agriculture. The community structure was strongly correlated to mineral nitrogen and phosphorus, richness peaking at high N:P ratio. This work represents the first molecular data documenting temporal patterns of AM fungal communities in agriculture; it shows the deleterious effect of conventional agricultural practices on AM fungal communities developing over time. Nonetheless, the highly dynamic nature of AM fungal communities suggests strategies for site-level management for which considering N:P stoichiometry is crucial.


Assuntos
Agricultura/métodos , Fabaceae/microbiologia , Micorrizas/genética , Nitrogênio/metabolismo , Fósforo/metabolismo , Ecossistema , Alemanha , Sequenciamento de Nucleotídeos em Larga Escala , Micorrizas/classificação , Solo/química , Microbiologia do Solo
18.
Zhongguo Zhong Yao Za Zhi ; 42(1): 70-75, 2017 Jan.
Artigo em Chinês | MEDLINE | ID: mdl-28945027

RESUMO

The study is aimed to estimate the diversity of arbuscular mycorrhizal fungi (AMF) in the main producing areas of Salvia miltiorrhiza.Diversity of AMF was surveyed directly on spores isolated from the field soil, collected from 20 sites of 8 provinces. Identification of the AMF was made by observation of spore morphology. At least 27 recognized AMF species were identified in samples from field soil, belonging to seven genera of AMF-Acaulospora, Glomus, Funneliformis, Ambispora, Rhizophagus, Pacispora, and Claroideoglomus. Acaulospora and Glomus were the dominant genera, respectively including nine and eight species. A. laevis (90%), R.manihotis (80%), A. brieticulata (75%), A. tuberculata (70%) were the dominant species.Colonization rate was determined,colonization was easily found, but the colonization intensities were low, the colonization rate remained at 10.92%-25.93%. The similarity between provinces is generally low, and the similarity coefficients were from 0.20 to 0.57.


Assuntos
Micorrizas/classificação , Panax notoginseng/microbiologia , Melhoramento Vegetal , Microbiologia do Solo , Marcadores Genéticos , Panax notoginseng/genética , Plantas Medicinais/genética , Plantas Medicinais/microbiologia , Seleção Genética
19.
Sci Total Environ ; 599-600: 273-283, 2017 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-28477484

RESUMO

Arbuscular mycorrhizal (AM) fungi form symbioses with the majority of terrestrial plant species, and their community influences many important ecosystem processes, including ecological succession. Understanding the successional changes of AM fungal communities in afforested zones over time is of primary interest in forest ecology. Black locust (Robinia pseudoacacia) has been widely planted on the Loess Plateau of China to prevent soil erosion. We sampled fine roots and rhizosphere soils in black locust plantations consisting of stands of 0, 11, 23, 35 and 46years of age to measure soil properties, AM fungal colonization level, and spore density and to describe the composition of AM fungal communities in roots and soils using 454 sequencing. With increasing stand age, AM fungal spore density and soil NO3-N and available K contents increased, dehydrogenase and alkaline phosphatase activities decreased, and soil catalase activity and the level of root colonization by arbuscules and hyphae first increased and then decreased. Roots and soils hosted different AM fungal diversity and communities. In soils, AM fungal diversity and community composition did not vary with stand age. In roots, the relative abundance of Claroideoglomus, together with Chao1 richness and OTU richness, peaked at the intermediate stage (35years) and then declined, and the relative abundance of Glomus decreased linearly with tree age, whereas the relative abundance of the dominant genus Rhizophagus did not vary with stand age. Soil available K and NO3-N largely explained the shift in the structure of the root-colonizing AM fungal community along the chronosequence. Soil enzyme activities were also associated with changes in AM fungal spore abundance and root colonization level. All the results presented here suggest that the successional changes in AM fungal communities in black locust plantations occurring over time can largely be attributed to plantation-induced changes in soil nutrient levels.


Assuntos
Micorrizas/classificação , Raízes de Plantas/microbiologia , Robinia/microbiologia , Microbiologia do Solo , China , Solo , Árvores
20.
Mycorrhiza ; 27(4): 369-381, 2017 May.
Artigo em Inglês | MEDLINE | ID: mdl-28039601

RESUMO

Effects of soil depth and plant growth stages on arbuscular mycorrhizal fungal (AMF) colonization and community structure in maize roots and their potential contribution to host plant phosphorus (P) nutrition under different P-fertilizer inputs were studied. Research was conducted on a long-term field experiment over 3 years. AMF colonization was assessed by AM colonization rate and arbuscule abundances and their potential contribution to host P nutrition by intensity of fungal alkaline phosphatase (ALP)/acid phosphatase (ACP) activities and expressions of ZmPht1;6 and ZmCCD8a in roots from the topsoil and subsoil layer at different growth stages. AMF community structure was determined by specific amplification of 18S rDNA. Increasing P inputs up to 75-100 kg ha-1 yr-1 increased shoot biomass and P content but decreased AMF colonization and interactions between AMF and roots. AM colonization rate, intensity of fungal ACP/ALP activities, and expression of ZmPht1;6 in roots from the subsoil were greater than those from topsoil at elongation and silking but not at the dough stage when plants received adequate or excessive P inputs. Neither P input nor soil depth influenced the number of AMF operational taxonomic units (OTUs) present in roots, but P-fertilizer input, in particular, influenced community composition and relative AMF abundance. In conclusion, although increasing P inputs reduce AMF colonization and influence AMF community structure, AMF can potentially contribute to plant P nutrition even in well-fertilized soils, depending on the soil layer in which roots are located and the growth stage of host plants.


Assuntos
Micorrizas/classificação , Fósforo , Raízes de Plantas/microbiologia , Microbiologia do Solo , Zea mays/microbiologia , Fertilizantes , Solo
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