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1.
Appl Biochem Biotechnol ; 193(4): 1086-1098, 2021 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-33405009

RESUMO

Polyhydroxyalkanoates (PHAs) have attracted attention as an environmentally degradable bioplastic which potentially replaces synthetic polymers used in a wide range of industries. One of most promising microorganisms for the production of PHAs is Pseudomonas putida. In this study, we purpose to develop sustainable processes to convert abundant palm oil available in local market to high value PHAs and optimize PHAs production by Pseudomonas putida TISTR 1522 from saponified palm oil. We found that the highest yield of PHAs production (0.95 g/L, 40.15%) was obtained in culture medium supplemented with 1% (w/v) fatty acid salt by P. putida TISTR 1522 after 24-h cultivation. The intracellular PHAs were located in granules inside the cells, which fluoresced bright yellow by staining with Nile red. The physical appearance of intracellular PHAs investigated by transmission electron microscope (TEM) revealed that PHAs accumulate in granules, about 3-10 granules per cell. These granules are white and roundish-shaped with 0.3-0.5-µm diameter. The 1H NMR spectrum represented the typical characters of medium-chain length-PHAs. This variation of all parameters was successfully demonstrated a good intracellular PHAs accumulation in P. putida TISTR 1522 by fatty acid salt utilization.


Assuntos
Técnicas de Cultura Celular por Lotes , Óleo de Palmeira/química , Poli-Hidroxialcanoatos/biossíntese , Pseudomonas putida/crescimento & desenvolvimento , Óleo de Palmeira/metabolismo
2.
J Microbiol Biotechnol ; 28(7): 1147-1155, 2018 Jul 28.
Artigo em Inglês | MEDLINE | ID: mdl-29926702

RESUMO

The degradation efficiency and catabolism pathways of the different methylxanthines (MXs) in isolated caffeine-tolerant strain Pseudomonas putida CT25 were comprehensively studied. The results showed that the degradation efficiency of various MXs varied with the number and position of the methyl groups on the molecule (i.e., xanthine > 7-methylxanthine ≈ theobromine > caffeine > theophylline > 1-methylxanthine). Multiple MX catabolism pathways coexisted in strain CT25, and a different pathway would be triggered by various MXs. Demethylation dominated in the degradation of N-7-methylated MXs (such as 7-methylxanthine, theobromine, and caffeine), where C-8 oxidation was the major pathway in the catabolism of 1-methylxanthine, whereas demethylation and C-8 oxidation are likely both involved in the degradation of theophylline. Enzymes responsible for MX degradation were located inside the cell. Both cell culture and cell-free enzyme assays revealed that N-1 demethylation might be a rate-limiting step for the catabolism of the MXs. Surprisingly, accumulation of uric acid was observed in a cell-free reaction system, which might be attributed to the lack of activity of uricase, a cytochrome c-coupled membrane integral enzyme.


Assuntos
Cafeína/metabolismo , Redes e Vias Metabólicas , Pseudomonas putida/isolamento & purificação , Pseudomonas putida/metabolismo , Microbiologia do Solo , Xantinas/metabolismo , Biodegradação Ambiental , Cafeína/química , Tolerância a Medicamentos , Jardins , Pseudomonas putida/enzimologia , Pseudomonas putida/crescimento & desenvolvimento , Solo , Especificidade por Substrato , Chá/microbiologia , Teobromina/química , Teobromina/metabolismo , Teofilina/química , Teofilina/metabolismo , Ácido Úrico/metabolismo , Xantina/química , Xantina/metabolismo , Xantinas/química
3.
J Microbiol Biotechnol ; 27(5): 990-994, 2017 May 28.
Artigo em Inglês | MEDLINE | ID: mdl-28274100

RESUMO

Polyhydroxyalkanoates (PHAs) are biodegradable plastics produced by bacteria, but their use in diverse applications is prohibited by high production costs. To reduce these costs, the conversion by Pseudomonas strains of P HAs from crude s ludge p alm oil ( SPO) a s an inexpensive renewable raw material was tested. Pseudomonas putida S12 was found to produce the highest yield (~41%) of elastomeric medium-chain-length (MCL)-PHAs from SPO. The MCL-PHA characteristics were analyzed by gas-chromatography/mass spectrometry, gel permeation chromatography, and differential scanning calorimetry. These findings may contribute to more widespread use of PHAs by reducing PHA production costs.


Assuntos
Óleos de Plantas/metabolismo , Poli-Hidroxialcanoatos/biossíntese , Pseudomonas putida/metabolismo , Esgotos/química , Técnicas de Cultura Celular por Lotes , Reatores Biológicos , Varredura Diferencial de Calorimetria/métodos , Cromatografia em Gel/métodos , Meios de Cultura , Ácidos Graxos/análise , Fermentação , Cromatografia Gasosa-Espectrometria de Massas/métodos , Óleo de Palmeira , Óleos de Plantas/análise , Poli-Hidroxialcanoatos/química , Pseudomonas/crescimento & desenvolvimento , Pseudomonas/metabolismo , Pseudomonas putida/crescimento & desenvolvimento
4.
Bioresour Technol ; 211: 1-5, 2016 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-26995615

RESUMO

Algal-bacterial synergistic cultivation could be an optional wastewater treatment technology in temperate areas. In this study, a locally screened vigorous Chlorella strain was characterized and then it was used in a comparative study of wastewater treatment and nutrient recycle assessment via activated sludge (AS), microalgae and their combination systems. Chlorella sp. cultured with AS in light showed the best performance, in which case the removal efficiencies of COD, NH3-N and TP were 87.3%, 99.2% and 83.9%, respectively, within a short period of 1day. Algal-bacterial combination in light had the best settleability. Chlorella sp. contained biomass, could be processed to feed, fertilizer or fuel due to the improved quality (higher C/H/N) compared with sludge. PCR-DGGE analysis shows that two types of rhizobacteria, namely, Pseudomonas putida and Flavobacterium hauense were enriched in sludge when cultured with algae in light, serving as the basics for artificial consortium construction for improved wastewater treatment.


Assuntos
Chlorella/metabolismo , Microalgas/metabolismo , Esgotos/microbiologia , Gerenciamento de Resíduos/métodos , Águas Residuárias/química , Biomassa , Flavobacterium/crescimento & desenvolvimento , Flavobacterium/isolamento & purificação , Flavobacterium/metabolismo , Nitrogênio/análise , Pseudomonas putida/crescimento & desenvolvimento , Pseudomonas putida/isolamento & purificação , Pseudomonas putida/metabolismo , Reciclagem , Águas Residuárias/microbiologia
5.
Appl Microbiol Biotechnol ; 99(14): 5875-83, 2015 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-25616526

RESUMO

Threonine aldolases (TAs) are useful enzymes for the synthesis of ß-hydroxy-α-amino acids due to their capability to catalyze asymmetric aldol reactions. Starting from two prochiral compounds, an aldehyde and glycine, two chiral stereocenters were formed in a single step via C-C bond formation. Owing to poor diastereoselectivity and low activity, the enzymatic synthesis of ß-hydroxy-α-amino acids by TAs is still a challenge. For identification of new TAs, a growth-dependent selection system in Pseudomonas putida KT2440 has been developed. This bacterium is able to use aromatic compounds such as benzaldehyde, which is the cleavage product of the TA-mediated retro-aldol reaction of phenylserine, as sole carbon source via the ß-ketoadipate pathway. With DL-threo-ß-phenylserine as sole carbon source, this strain showed only slight growth in minimal medium. This growth deficiency can be restored by introducing and expressing genes encoding TAs. In order to develop a highly efficient selection system, the gene taPp of P. putida KT2440 encoding a TA was successfully deleted by replacement with an antibiotic resistance cassette. Different growth studies were carried out to prove the operability of the selection system. Genes encoding for L- and D-specific TAs (L-TA genes of Escherichia coli (ltaE) and Saccharomyces cerevisiae (gly1) and D-TA gene of Achromobacter xylosoxidans (dtaAX)) were introduced into the selection strain P. putida KT2440ΔtaPp, followed by cultivation on minimal medium supplemented with DL-threo-ß-phenylserine. The results demonstrate that only the selection strains with plasmid-encoded L-TAs were able to grow on this racemic amino acid, whereas the corresponding strain harboring the gene coding for a D-specific TA showed no growth. In summary, it can be stated that a powerful screening tool was developed to identify easily by growth new L-specific threonine aldolases or other enzymes from genomic or metagenomic libraries liberating benzaldehyde.


Assuntos
Meios de Cultura/química , Glicina Hidroximetiltransferase/isolamento & purificação , Glicina Hidroximetiltransferase/metabolismo , Pseudomonas putida/enzimologia , Pseudomonas putida/crescimento & desenvolvimento , Seleção Genética , Achromobacter denitrificans/enzimologia , Achromobacter denitrificans/genética , Benzaldeídos/metabolismo , Carbono/metabolismo , Escherichia coli/enzimologia , Escherichia coli/genética , Glicina Hidroximetiltransferase/genética , Fenilalanina/análogos & derivados , Fenilalanina/metabolismo , Pseudomonas putida/genética , Proteínas Recombinantes/genética , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/metabolismo , Saccharomyces cerevisiae/enzimologia , Saccharomyces cerevisiae/genética
6.
Mol Biol Rep ; 41(3): 1385-99, 2014 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-24407601

RESUMO

The inoculation of Pseudomonas putida NBRIC19 protected wheat plant from phytotoxic effect of Parthenium hysterophorus (Parthenium) and enhanced root length, shoot length, dry weight, spike length and chlorophyll content. With the aim to screen for genes differentially expressed in P. putida NBRIC19-inoculated wheat grown along with Parthenium (WPT), the suppression subtractive hybridization (SSH) methodology was employed. The SSH analysis was performed with WPC (uninoculated wheat grown along with Parthenium) as driver and WPT as tester. The cDNA library, enriched with differentially expressed ESTs (expressed sequence tags), were constructed from WPT. Following an initial screen of 165 ESTs in our library, 32 ESTs were identified, annotated and further validated by semiquantitative RT-PCR. The differentially expressed ESTs were associated with general stress response, defense response, growth and development, metabolic process, photosynthesis, signal transduction, and some other with unknown function. Five ESTs showing downregulation in expression level in response to Parthenium got upregulated due to P. putida NBRIC19 inoculation and further validated by quantitative real time PCR analysis at different time intervals viz. 15, 30, 45 and 90 days. SSH has been implemented for the first time to gain insights into molecular events underlying successful role of P. putida NBRIC19 in providing protection to wheat against Parthenium. The information generated in this study provides new clues to aid the understanding of genes corresponding to differentially expressed ESTs putatively involved in allelopathic interactions. Further characterization and functional analysis of these genes may provide valuable information for future studies of the molecular mechanism by which plants adapt to allelopathic effect of Parthenium.


Assuntos
Extratos Vegetais/administração & dosagem , Pseudomonas putida/genética , Transcriptoma/genética , Triticum/genética , Etiquetas de Sequências Expressas , Regulação da Expressão Gênica de Plantas , Biblioteca Gênica , Análise em Microsséries , Partenogênese , Fotossíntese/genética , Doenças das Plantas/genética , Pseudomonas putida/crescimento & desenvolvimento , Triticum/microbiologia
7.
Environ Sci Pollut Res Int ; 21(7): 5227-41, 2014 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-24390198

RESUMO

A native Bacillus cereus isolate has been employed, for the first time, for simultaneous decolorization, dechlorination of chloroorganics, and Cr(6+) remediation from the real tannery effluent. Most of the physicochemical variables in 3:1 diluted effluent were well above the standard prescribed limits, which decreased substantially upon microbial treatment. The extent of bioremediation was better in diluted (3:1) as compared to undiluted effluent supplemented with nutrients and augmented with B. cereus isolate. Maximum growth, effluent decolorization (42.5 %), dechlorination (74.1 %), and Cr(6+) remediation (34.2 %) were attained with 4.0 % (v/v) inoculum, 0.8 % glucose, and 0.2 % ammonium chloride in 3:1 diluted effluent at natural pH (8.1) within 72 h of incubation. The efficiency of bioremediation in a bioreactor was higher as compared to a flask trial during 72 h of incubation: decolorization (47.9 %) was enhanced by 5.4 %, dechlorination (77.4 %) by 3.3 %, and Cr(6+) removal (41.7 %) by 7.5 % at an initial color of 286 Pt-Co units and initial concentration of 62 mg chloride ions and 108 mg l(-1) Cr(6+). Immobilized biomass of Pseudomonas putida and B. cereus coculture enhanced the extent of Cr(6+) remediation (51.9 %) by 10.2 % compared to the bioreactor trial. Chromate reductase activity and reduced Cr directly correlated and were mainly associated with soluble fraction of B. cereus plus effluent natural microflora. The GC-MS analyses revealed the formation of metabolites such as acetic acid and 2-butenoic acid in bacterially treated effluent. The supplementation of nutrients along with B. cereus augmentation is required for efficient effluent bioremediation.


Assuntos
Bacillus cereus/fisiologia , Cromo/metabolismo , Hidrocarbonetos Clorados/metabolismo , Resíduos Industriais/análise , Curtume , Poluentes Químicos da Água/metabolismo , Bacillus cereus/isolamento & purificação , Bacillus cereus/metabolismo , Biodegradação Ambiental , Biomassa , Cromo/análise , Corantes/análise , Corantes/metabolismo , Cromatografia Gasosa-Espectrometria de Massas , Halogenação , Hidrocarbonetos Clorados/análise , Pseudomonas putida/crescimento & desenvolvimento , Pseudomonas putida/metabolismo , Eliminação de Resíduos Líquidos/métodos , Poluentes Químicos da Água/análise
8.
Braz J Microbiol ; 44(2): 595-605, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24294259

RESUMO

In situ biosurfactant (rhamnolipid) production by Pseudomonas putida CB-100 was achieved during a bioaugmented and biostimulated treatment to remove hydrocarbons from aged contaminated soil from oil well drilling operations. Rhamnolipid production and contaminant removal were determined for several treatments of irradiated and non-irradiated soils: nutrient addition (nitrogen and phosphorus), P. putida addition, and addition of both (P. putida and nutrients). The results were compared against a control treatment that consisted of adding only sterilized water to the soils. In treatment with native microorganisms (non-irradiated soils) supplemented with P. putida, the removal of total petroleum hydrocarbons (TPH) was 40.6%, the rhamnolipid production was 1.54 mg/kg, and a surface tension of 64 mN/m was observed as well as a negative correlation (R = -0.54; p < 0.019) between TPH concentration (mg/kg) and surface tension (mN/m), When both bacteria and nutrients were involved, TPH levels were lowered to 33.7%, and biosurfactant production and surface tension were 2.03 mg/kg and 67.3 mN/m, respectively. In irradiated soil treated with P. putida, TPH removal was 24.5% with rhamnolipid generation of 1.79 mg/kg and 65.6 mN/m of surface tension, and a correlation between bacterial growth and biosurfactant production (R = -0.64; p < 0.009) was observed. When the nutrients and P. putida were added, TPH removal was 61.1%, 1.85 mg/kg of biosurfactants were produced, and the surface tension was 55.6 mN/m. In summary, in irradiated and non-irradiated soils, in situ rhamnolipid production by P. putida enhanced TPH decontamination of the soil.


Assuntos
Glicolipídeos/metabolismo , Hidrocarbonetos/metabolismo , Petróleo/metabolismo , Pseudomonas putida/metabolismo , Microbiologia do Solo , Poluentes do Solo/metabolismo , Tensoativos/metabolismo , Pseudomonas putida/crescimento & desenvolvimento
9.
Braz. j. microbiol ; 44(2): 595-605, 2013. graf, mapas, tab
Artigo em Inglês | LILACS | ID: lil-688592

RESUMO

In situ biosurfactant (rhamnolipid) production by Pseudomonas putida CB-100 was achieved during a bioaugmented and biostimulated treatment to remove hydrocarbons from aged contaminated soil from oil well drilling operations. Rhamnolipid production and contaminant removal were determined for several treatments of irradiated and non-irradiated soils: nutrient addition (nitrogen and phosphorus), P. putida addition, and addition of both (P. putida and nutrients). The results were compared against a control treatment that consisted of adding only sterilized water to the soils. In treatment with native microorganisms (non-irradiated soils) supplemented with P. putida, the removal of total petroleum hydrocarbons (TPH) was 40.6%, the rhamnolipid production was 1.54 mg/kg, and a surface tension of 64 mN/m was observed as well as a negative correlation (R = -0.54; p < 0.019) between TPH concentration (mg/kg) and surface tension (mN/m), When both bacteria and nutrients were involved, TPH levels were lowered to 33.7%, and biosurfactant production and surface tension were 2.03 mg/kg and 67.3 mN/m, respectively. In irradiated soil treated with P. putida, TPH removal was 24.5% with rhamnolipid generation of 1.79 mg/kg and 65.6 mN/m of surface tension, and a correlation between bacterial growth and biosurfactant production (R = -0.64; p < 0.009) was observed. When the nutrients and P. putida were added, TPH removal was 61.1%, 1.85 mg/kg of biosurfactants were produced, and the surface tension was 55.6 mN/m. In summary, in irradiated and non-irradiated soils, in situ rhamnolipid production by P. putida enhanced TPH decontamination of the soil.


Assuntos
Glicolipídeos/metabolismo , Hidrocarbonetos/metabolismo , Petróleo/metabolismo , Pseudomonas putida/metabolismo , Microbiologia do Solo , Poluentes do Solo/metabolismo , Tensoativos/metabolismo , Pseudomonas putida/crescimento & desenvolvimento
10.
Appl Environ Microbiol ; 78(11): 4057-61, 2012 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-22467497

RESUMO

Biofilms are difficult to eliminate with standard antimicrobial treatments due to their high antibiotic resistance relative to free-living cells. Here, we show that selected antimicrobial essential oils can eradicate bacteria within biofilms with higher efficiency than certain important antibiotics, making them interesting candidates for the treatment of biofilms.


Assuntos
Antibacterianos/farmacologia , Biofilmes/efeitos dos fármacos , Óleos Voláteis/farmacologia , Pseudomonas aeruginosa/efeitos dos fármacos , Pseudomonas putida/efeitos dos fármacos , Staphylococcus aureus/efeitos dos fármacos , Bálsamos/química , Biofilmes/crescimento & desenvolvimento , Cinnamomum/química , Humanos , Testes de Sensibilidade Microbiana , Óleos de Plantas/farmacologia , Pseudomonas aeruginosa/crescimento & desenvolvimento , Pseudomonas putida/crescimento & desenvolvimento , Staphylococcus aureus/crescimento & desenvolvimento , Thymus (Planta)/química
11.
J Chem Ecol ; 38(5): 476-85, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-22527057

RESUMO

Phyllospheric bacteria were isolated from microsites around essential-oil-containing glands of two oregano (Origanum vulgare subsp. hirtum) lines. These bacteria, 20 isolates in total, were subjected to bioassays to examine their growth potential in the presence of essential oils at different concentrations. Although there were qualitative and quantitative differences in the essential oil composition between the two oregano lines, no differences were recorded in their antibacterial activity. In disk diffusion bioassays, four of the isolated strains could grow almost unrestrained in the presence of oregano oil, another five proved very sensitive, and the remaining 11 showed intermediate sensitivity. The strain least inhibited by oregano essential oil was further identified by complete16s rRNA gene sequencing as Pseudomonas putida. It was capable of forming biofilms even in the presence of oregano oil at high concentrations. Resistance of P. putida to oregano oil was further elaborated by microwell dilution bioassays, and its topology on oregano leaves was studied by electron microscopy. When inoculated on intact oregano plants, P. putida was able not only to colonize sites adjacent to essential oil-containing glands, but even to grow intracellularly. This is the first time that such prolific bacterial growth inside the glands has been visually observed. Results of this study further revealed that several bacteria can be established on oregano leaves, suggesting that these bacteria have attributes that allow them to tolerate or benefit from oregano secondary metabolites.


Assuntos
Bactérias/crescimento & desenvolvimento , Fenômenos Fisiológicos Bacterianos , Interações Hospedeiro-Patógeno , Óleos Voláteis/metabolismo , Origanum/metabolismo , Origanum/microbiologia , Testes de Sensibilidade Microbiana , Óleos Voláteis/isolamento & purificação , Folhas de Planta/metabolismo , Folhas de Planta/microbiologia , Óleos de Plantas/isolamento & purificação , Óleos de Plantas/metabolismo , Pseudomonas putida/crescimento & desenvolvimento , Pseudomonas putida/fisiologia
12.
Microb Cell Fact ; 10: 80, 2011 Oct 17.
Artigo em Inglês | MEDLINE | ID: mdl-21999513

RESUMO

BACKGROUND: Rhamnolipids are potent biosurfactants with high potential for industrial applications. However, rhamnolipids are currently produced with the opportunistic pathogen Pseudomonas aeruginosa during growth on hydrophobic substrates such as plant oils. The heterologous production of rhamnolipids entails two essential advantages: Disconnecting the rhamnolipid biosynthesis from the complex quorum sensing regulation and the opportunity of avoiding pathogenic production strains, in particular P. aeruginosa. In addition, separation of rhamnolipids from fatty acids is difficult and hence costly. RESULTS: Here, the metabolic engineering of a rhamnolipid producing Pseudomonas putida KT2440, a strain certified as safety strain using glucose as carbon source to avoid cumbersome product purification, is reported. Notably, P. putida KT2440 features almost no changes in growth rate and lag-phase in the presence of high concentrations of rhamnolipids (> 90 g/L) in contrast to the industrially important bacteria Bacillus subtilis, Corynebacterium glutamicum, and Escherichia coli. P. putida KT2440 expressing the rhlAB-genes from P. aeruginosa PAO1 produces mono-rhamnolipids of P. aeruginosa PAO1 type (mainly C(10):C(10)). The metabolic network was optimized in silico for rhamnolipid synthesis from glucose. In addition, a first genetic optimization, the removal of polyhydroxyalkanoate formation as competing pathway, was implemented. The final strain had production rates in the range of P. aeruginosa PAO1 at yields of about 0.15 g/g(glucose) corresponding to 32% of the theoretical optimum. What's more, rhamnolipid production was independent from biomass formation, a trait that can be exploited for high rhamnolipid production without high biomass formation. CONCLUSIONS: A functional alternative to the pathogenic rhamnolipid producer P. aeruginosa was constructed and characterized. P. putida KT24C1 pVLT31_rhlAB featured the highest yield and titer reported from heterologous rhamnolipid producers with glucose as carbon source. Notably, rhamnolipid production was uncoupled from biomass formation, which allows optimal distribution of resources towards rhamnolipid synthesis. The results are discussed in the context of rational strain engineering by using the concepts of synthetic biology like chassis cells and orthogonality, thereby avoiding the complex regulatory programs of rhamnolipid production existing in the natural producer P. aeruginosa.


Assuntos
Glucose/metabolismo , Glicolipídeos/biossíntese , Pseudomonas putida/crescimento & desenvolvimento , Pseudomonas putida/metabolismo , Biomassa , Engenharia Metabólica , Pseudomonas putida/genética
14.
Curr Microbiol ; 61(4): 241-7, 2010 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-20145932

RESUMO

For the survival of individual isolates of gram-negative bacteria Pseudomonas putida, Achromobacter xylosoxidans, and the gram-positive bacterium Bacillus megaterium, in an environment polluted with crude oil products, the production of catalases exhibiting both catalase and dianisidine-peroxidase activity is important. Electrophoretic resolution of cell-free extracts of aerobically grown strains in Luria-Bertani medium during exponential phase revealed distinctive expression of catalatic and peroxidatic activities detected with 3,3'-diaminobenzidine tetrahydrochloride. A considerable diversity in microbial catalase and peroxidase responses to 20 or 40 mM H(2)O(2) stress, resulted from hydroperoxidase's variant of original isolates, indicating an environmental selective pressure. However, catalase was important for the adaptation of cultures to high concentration of 60 mM H(2)O(2). Appreciable differences in the sensitivity to toxic effect of H(2)O(2) (20 or 40 mM) treatment between individual isolates and their adapted variants during growth were observed until the middle of exponential phase, but they were insignificant at the entry to stationary phase. Isolates also exhibited a considerable diversity in catalases responses to phenolic contaminants 1 and 2 mM o- or p-phenylenediamine. Catalase activity of bacterium P. putida was visibly stimulated only by p-phenylenediamine and not by its positional isomer o-PDA. This study contributes to a better understanding of the role catalases play in bacterial responses to a polluted environment.


Assuntos
Achromobacter denitrificans/metabolismo , Bacillus megaterium/metabolismo , Catalase/metabolismo , Estresse Oxidativo , Peroxidase/metabolismo , Pseudomonas putida/metabolismo , Microbiologia do Solo , Achromobacter denitrificans/crescimento & desenvolvimento , Bacillus megaterium/crescimento & desenvolvimento , Eletroforese em Gel de Poliacrilamida , Poluição Ambiental , Peróxido de Hidrogênio/metabolismo , Petróleo , Fenilenodiaminas/metabolismo , Pseudomonas putida/crescimento & desenvolvimento , Espécies Reativas de Oxigênio/metabolismo , Poluentes do Solo/metabolismo
15.
Pol J Microbiol ; 57(1): 71-6, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-18610658

RESUMO

Some parts of the Indian Himalayan region are covered by established and abandoned tea bushes. Rhizospheric soils of these plants were studied for bacterial dominance and antagonism. Representatives of Bacillus and Pseudomonas genera were found to dominate the rhizosphere of established and abandoned tea bushes, respectively. Amongst the isolated species Bacillus subtilis and Bacillus mycoides appeared to be closely associated with roots of established tea bushes while the rhizosphere of abandoned tea bushes was dominated by Pseudomonas putida. Four isolates of both B. subtilis and P. putida were selected on the basis of maximum antibacterial activity. The bacteriocin-like activity of B. subtilis and P putida strains was detected to be active over a range of temperature 0-50 degrees C and was sensitive to proteolytic enzymes. Incubation of indicator strains with different concentrations of bacteriocin-like substances confirmed their bactericidal activity. Various species of Bacillus and Pseudomonas behaved antagonistically amongst themselves due to the production of bacteriocins under in vitro conditions.


Assuntos
Bacillus subtilis/isolamento & purificação , Camellia sinensis/microbiologia , Pseudomonas putida/isolamento & purificação , Microbiologia do Solo , Antibacterianos/metabolismo , Antibiose , Bacillus subtilis/crescimento & desenvolvimento , Bacillus subtilis/metabolismo , Bacteriocinas/metabolismo , Contagem de Colônia Microbiana , Índia , Peptídeo Hidrolases/metabolismo , Raízes de Plantas/microbiologia , Pseudomonas putida/crescimento & desenvolvimento , Pseudomonas putida/metabolismo , Pseudomonas syringae/crescimento & desenvolvimento , Pseudomonas syringae/isolamento & purificação
16.
Sci Total Environ ; 395(2-3): 63-71, 2008 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-18374392

RESUMO

The use of sequestering agents for the transformation of radionuclides in low concentrations in contaminated soils/sediments offers considerable potential for environmental cleanup. This study evaluated the influence of three types of phosphate (rock phosphate, biological phosphate, and calcium phytate) and two microbial amendments (Alcaligenes piechaudii and Pseudomonas putida) on U mobility. All tested phosphate amendments reduced aqueous U concentrations more than 90%, likely due to formation of insoluble phosphate precipitates. The addition of A. piechaudii and P. putida alone were found to reduce U concentrations 63% and 31%, respectively. Uranium removal in phosphate treatments was significantly reduced in the presence of the two microbes. Two sediments were evaluated in experiments on the effects of phosphate amendments on U mobility, one from a stream on the Department of Energy's Savannah River Site near Aiken, SC and the other from the Hanford Site, a Department of Energy facility in Washington state. Increased microbial activity in the treated sediment led to a reduction in phosphate effectiveness. The average U concentration in 1 M MgCl(2) extract from U contaminated sediment was 437 microg/kg, but in the same sediment without microbes (autoclaved), the extractable U concentration was only 103 microg/kg. The U concentration in the 1 M MgCl(2) extract was approximately 0 microg/kg in autoclaved amended sediment treated with autoclaved biological apatite. These results suggest that microbes may reduce phosphate amendment remedial effectiveness.


Assuntos
Alcaligenes/crescimento & desenvolvimento , Sedimentos Geológicos , Mineração , Fosfatos/química , Pseudomonas putida/crescimento & desenvolvimento , Resíduos Radioativos/análise , Urânio/análise , Biodegradação Ambiental , Sedimentos Geológicos/química , Sedimentos Geológicos/microbiologia , Solubilidade , Urânio/química
17.
Environ Sci Technol ; 41(16): 5875-81, 2007 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-17874800

RESUMO

A predicting model is proposed to evaluate metabolic byproducts accumulation and process performance in suspended growth reactors treating air emissions contaminated with volatile organic compounds (VOCs). The model presented integrates a multistep kinetic model and a general mechanistic model describing bioreactor operation. This integrated model is based on general equations modeling, both mass transport and the mechanisms underlying pollutant biotransformation and byproducts accumulation, and can be applied to a wide range of operating conditions (VOC substrate, O2, and nutrients limitation). The model was tested for predicting benzyl alcohol (BA) accumulation in a chemostat reactor treating toluene. BA accumulates in Pseudomonas putida F1 cultures degrading toluene as a result of methyl monooxygenation reaction parallel to the main TOD degradation pathway. The operational conditions leading to BA accumulation are evaluated through simulations assays. Simulation results indicate that BA accumulation occurs when other substrates rather than toluene are limiting. Therefore, operation under toluene limitation is highly recommended to ensure not only the detoxification goals but also to avoid potential mutagenic effects of BA over the microbial culture.


Assuntos
Reatores Biológicos , Resíduos Perigosos , Compostos Orgânicos/isolamento & purificação , Pseudomonas putida/crescimento & desenvolvimento , Álcool Benzílico/metabolismo , Biodegradação Ambiental , Simulação por Computador , Oxigênio/metabolismo , Pseudomonas putida/metabolismo , Análise de Regressão , Reprodutibilidade dos Testes , Tolueno/química , Tolueno/isolamento & purificação , Volatilização
18.
Appl Environ Microbiol ; 72(11): 7074-82, 2006 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-17088379

RESUMO

Most polluted sites contain mixed waste. This is especially true of the U.S. Department of Energy (DOE) waste sites which hold a complex mixture of heavy metals, radionuclides, and organic solvents. In such environments enzymes that can remediate multiple pollutants are advantageous. We report here evolution of an enzyme, ChrR6 (formerly referred to as Y6), which shows a markedly enhanced capacity for remediating two of the most serious and prevalent DOE contaminants, chromate and uranyl. ChrR6 is a soluble enzyme and reduces chromate and uranyl intracellularly. Thus, the reduced product is at least partially sequestered and nucleated, minimizing the chances of reoxidation. Only one amino acid change, (Tyr)128(Asn), was responsible for the observed improvement. We show here that ChrR6 makes Pseudomonas putida and Escherichia coli more efficient agents for bioremediation if the cellular permeability barrier to the metals is decreased.


Assuntos
Evolução Molecular Direcionada , Escherichia coli/enzimologia , Escherichia coli/genética , Oxirredutases/metabolismo , Urânio/metabolismo , Escherichia coli/crescimento & desenvolvimento , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Engenharia Genética/métodos , Cinética , Mutagênese Sítio-Dirigida , Oxirredução , Oxirredutases/genética , Pseudomonas putida/enzimologia , Pseudomonas putida/genética , Pseudomonas putida/crescimento & desenvolvimento , Poluentes Radioativos/metabolismo , Solubilidade
19.
Bioresour Technol ; 97(8): 982-8, 2006 May.
Artigo em Inglês | MEDLINE | ID: mdl-16009549

RESUMO

A strain of Pseudomonas putida was found capable of metabolizing p-nitrophenol (PNP) as a sole source of carbon, nitrogen and energy. To explore the applicability of this strain for bioremediation for controlling environmental PNP pollution, its degradation potential at 300 and 500 ppm was examined in a medium devoid of carbon and nitrogen source (minimal medium). At A600, 0.5 OD inoculum, the strain metabolized 300 and 500 ppm within 36 and 72 h, respectively. The degradation was accompanied by release of stoichiometric amount of nitrite. Effect of glucose and nitrogen on PNP degradation under similar conditions revealed that (i) glucose (0.4 g/l) at 20 and 50 ppm PNP did not accelerate the rate of PNP degradation, while glucose (0.4 g/l) at 300 ppm PNP inhibited its degradation, (ii) nitrogen supplement viz. sodium nitrate and ammonium sulphate (0.04 and 0.4 g/l) in minimal medium with PNP (300 ppm) showed no effect on PNP degradation, while glutamate alone (0.04 and 0.4 g/l) showed mere rise in biomass (from 0.5 to 1.6 OD units), and (iii) acidic pH (4.0-6.5) did not support PNP degradation, while alkaline pH (7.5-9.5) significantly enhanced the rate of PNP degradation. The complete degradation of PNP at high concentration (300 ppm) was confirmed by HPTLC analysis. In order to probe root cause of higher PNP degradation, preliminary studies on genetic analysis of P. putida were undertaken, which revealed the prevalence of a degradative plasmid of approximately 15 kb, while cured derivatives of P. putida (PNP-) did not show ability to degrade PNP. Further conjugal transfer of PNP+ phenotype from P. putida to standard strain of E. coli Nova blue (PNP-) confirmed the degradative type of plasmid.


Assuntos
Nitrofenóis/metabolismo , Pseudomonas putida/metabolismo , Poluentes Químicos da Água/metabolismo , Sulfato de Amônio/farmacologia , Biodegradação Ambiental , Biomassa , Cromatografia Líquida de Alta Pressão , Conjugação Genética , Meios de Cultura/química , Relação Dose-Resposta a Droga , Eletroforese em Gel de Ágar , Escherichia coli/genética , Escherichia coli/metabolismo , Glucose/farmacologia , Ácido Glutâmico/farmacologia , Concentração de Íons de Hidrogênio , Nitratos/farmacologia , Nitrogênio/farmacologia , Nitrofenóis/análise , Plasmídeos , Pseudomonas putida/efeitos dos fármacos , Pseudomonas putida/genética , Pseudomonas putida/crescimento & desenvolvimento , Pseudomonas putida/isolamento & purificação , Fatores de Tempo
20.
Artigo em Inglês | MEDLINE | ID: mdl-16287640

RESUMO

A heavy metal accumulation bacterium Pseudomonas putida 5-x isolated from electroplating effluent was used as biosorbent for heavy metal removal from wastewater. In order to compete with physical adsorbent, the optimization of the cell preparation technique for further improving its heavy metal adsorption capacity was conducted. Experimental results showed that the variation of medium compositions and cell growth age, and different cell pre-treating technique would result in the variation of the cell surface components and structural, hence the variation of adsorption capacity of the cell to heavy metal ions. With optimum cell culture conditions and pretreatment technique, the Cu2+ adsorption capacity of the cell was obviously increased from 51.2 mg g-1 to 89.6 mg g-1. The optimised P. putida 5-x cell could be reused at least five cycles to remove heavy metal ions from electroplating effluent with about 95% removal efficiency.


Assuntos
Cobre/isolamento & purificação , Pseudomonas putida , Eliminação de Resíduos Líquidos/métodos , Poluentes Químicos da Água/isolamento & purificação , Adsorção , Proteínas da Membrana Bacteriana Externa/química , Técnicas Bacteriológicas , Técnicas de Cultura de Células , Membrana Celular/química , Membrana Celular/ultraestrutura , Cobre/química , Meios de Cultura , Galvanoplastia , Ácido Clorídrico , Resíduos Industriais , Lipídeos de Membrana/química , Microscopia Eletrônica de Transmissão , Níquel/química , Níquel/isolamento & purificação , Fósforo/análise , Pseudomonas putida/crescimento & desenvolvimento , Pseudomonas putida/metabolismo , Pseudomonas putida/ultraestrutura
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