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1.
Plant Commun ; 2(6): 100244, 2021 11 08.
Artigo em Inglês | MEDLINE | ID: mdl-34778750

RESUMO

Iron (Fe) transport and reallocation are essential to Fe homeostasis in plants, but it is unclear how Fe homeostasis is regulated, especially under stress. Here we report that NPF5.9 and its close homolog NPF5.8 redundantly regulate Fe transport and reallocation in Arabidopsis. NPF5.9 is highly upregulated in response to Fe deficiency. NPF5.9 expresses preferentially in vasculature tissues and localizes to the trans-Golgi network, and NPF5.8 showed a similar expression pattern. Long-distance Fe transport and allocation into aerial parts was significantly increased in NPF5.9-overexpressing lines. In the double mutant npf5.8 npf5.9, Fe loading in aerial parts and plant growth were decreased, which were partially rescued by Fe supplementation. Further analysis showed that expression of PYE, the negative regulator for Fe homeostasis, and its downstream target NAS4 were significantly altered in the double mutant. NPF5.9 and NPF5.8 were shown to also mediate nitrate uptake and transport, although nitrate and Fe application did not reciprocally affect each other. Our findings uncovered the novel function of NPF5.9 and NPF5.8 in long-distance Fe transport and homeostasis, and further indicated that they possibly mediate nitrate transport and Fe homeostasis independently in Arabidopsis.


Assuntos
Arabidopsis/genética , Arabidopsis/metabolismo , Homeostase/genética , Transporte de Íons/genética , Ferro/metabolismo , Proteínas de Membrana Transportadoras/genética , Proteínas de Membrana Transportadoras/metabolismo , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Variação Genética , Genótipo , Mutação
2.
Sci Rep ; 11(1): 13154, 2021 06 23.
Artigo em Inglês | MEDLINE | ID: mdl-34162989

RESUMO

This study aimed to identify potential novel drug candidates and targets for Parkinson's disease. First, 970 genes that have been reported to be related to PD were collected from five databases, and functional enrichment analysis of these genes was conducted to investigate their potential mechanisms. Then, we collected drugs and related targets from DrugBank, narrowed the list by proximity scores and Inverted Gene Set Enrichment analysis of drug targets, and identified potential drug candidates for PD treatment. Finally, we compared the expression distribution of the candidate drug-target genes between the PD group and the control group in the public dataset with the largest sample size (GSE99039) in Gene Expression Omnibus. Ten drugs with an FDR < 0.1 and their corresponding targets were identified. Some target genes of the ten drugs significantly overlapped with PD-related genes or already known therapeutic targets for PD. Nine differentially expressed drug-target genes with p < 0.05 were screened. This work will facilitate further research into the possible efficacy of new drugs for PD and will provide valuable clues for drug design.


Assuntos
Antiparkinsonianos/isolamento & purificação , Descoberta de Drogas , Terapia de Alvo Molecular , Doença de Parkinson/tratamento farmacológico , Antiparkinsonianos/farmacologia , Linhagem Celular , Mineração de Dados/métodos , Bases de Dados Genéticas , Bases de Dados de Produtos Farmacêuticos , Descoberta de Drogas/métodos , Avaliação Pré-Clínica de Medicamentos , Transporte de Elétrons/genética , Metabolismo Energético/genética , Expressão Gênica/efeitos dos fármacos , Ontologia Genética , Humanos , Transporte de Íons/genética , Redes e Vias Metabólicas/genética , Doenças Neurodegenerativas/tratamento farmacológico , Doenças Neurodegenerativas/genética , Doença de Parkinson/genética , Mapeamento de Interação de Proteínas
3.
Plant Physiol ; 185(3): 781-795, 2021 04 02.
Artigo em Inglês | MEDLINE | ID: mdl-33793942

RESUMO

Nutrient uptake is critical for crop growth and is determined by root foraging in soil. Growth and branching of roots lead to effective root placement to acquire nutrients, but relatively little is known about absorption of nutrients at the root surface from the soil solution. This knowledge gap could be alleviated by understanding sources of genetic variation for short-term nutrient uptake on a root length basis. A modular platform called RhizoFlux was developed for high-throughput phenotyping of multiple ion-uptake rates in maize (Zea mays L.). Using this system, uptake rates were characterized for the crop macronutrients nitrate, ammonium, potassium, phosphate, and sulfate among the Nested Association Mapping (NAM) population founder lines. The data revealed substantial genetic variation for multiple ion-uptake rates in maize. Interestingly, specific nutrient uptake rates (nutrient uptake rate per length of root) were found to be both heritable and distinct from total uptake and plant size. The specific uptake rates of each nutrient were positively correlated with one another and with specific root respiration (root respiration rate per length of root), indicating that uptake is governed by shared mechanisms. We selected maize lines with high and low specific uptake rates and performed an RNA-seq analysis, which identified key regulatory components involved in nutrient uptake. The high-throughput multiple ion-uptake kinetics pipeline will help further our understanding of nutrient uptake, parameterize holistic plant models, and identify breeding targets for crops with more efficient nutrient acquisition.


Assuntos
Transporte de Íons/genética , Transporte de Íons/fisiologia , Fenótipo , Raízes de Plantas/genética , Raízes de Plantas/fisiologia , Zea mays/genética , Zea mays/fisiologia , Produtos Agrícolas/genética , Produtos Agrícolas/fisiologia , Variação Genética , Genótipo
4.
Int J Mol Sci ; 22(1)2020 Dec 22.
Artigo em Inglês | MEDLINE | ID: mdl-33374906

RESUMO

Plant vacuoles are unique compartments that play a critical role in plant growth and development. The vacuolar H+-ATPase (V-ATPase), together with the vacuolar H+-pyrophosphatase (V-PPase), generates the proton motive force that regulates multiple cell functions and impacts all aspects of plant life. We investigated the effect of V-ATPase activity in the vacuole on plant growth and development. We used an Arabidopsisthaliana (L.) Heynh. double mutant, vha-a2 vha-a3, which lacks two tonoplast-localized isoforms of the membrane-integral V-ATPase subunit VHA-a. The mutant is viable but exhibits impaired growth and leaf chlorosis. Nitrate assimilation led to excessive ammonium accumulation in the shoot and lower nitrogen uptake, which exacerbated growth retardation of vha-a2 vha-a3. Ion homeostasis was disturbed in plants with missing VHA-a2 and VHA-a3 genes, which might be related to limited growth. The reduced growth and excessive ammonium accumulation of the double mutant was alleviated by potassium supplementation. Our results demonstrate that plants lacking the two tonoplast-localized subunits of V-ATPase can be viable, although with defective growth caused by multiple factors, which can be alleviated by adding potassium. This study provided a new insight into the relationship between V-ATPase, growth, and ammonium accumulation, and revealed the role of potassium in mitigating ammonium toxicity.


Assuntos
Compostos de Amônio/metabolismo , Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , ATPases Vacuolares Próton-Translocadoras/metabolismo , Vacúolos/metabolismo , Arabidopsis/genética , Arabidopsis/crescimento & desenvolvimento , Proteínas de Arabidopsis/genética , Regulação da Expressão Gênica no Desenvolvimento , Regulação da Expressão Gênica de Plantas , Homeostase/efeitos dos fármacos , Homeostase/genética , Pirofosfatase Inorgânica/genética , Pirofosfatase Inorgânica/metabolismo , Transporte de Íons/efeitos dos fármacos , Transporte de Íons/genética , Mutação , Nitrogênio/metabolismo , Raízes de Plantas/genética , Raízes de Plantas/crescimento & desenvolvimento , Raízes de Plantas/metabolismo , Brotos de Planta/genética , Brotos de Planta/crescimento & desenvolvimento , Brotos de Planta/metabolismo , Potássio/farmacologia , Força Próton-Motriz , ATPases Vacuolares Próton-Translocadoras/genética , Vacúolos/genética
5.
BMC Mol Cell Biol ; 21(1): 31, 2020 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-32306897

RESUMO

BACKGROUND: Cytoprotection afforded by mitochondrial ATP-sensitive K+-channel (mKATP-channel) opener diazoxide (DZ) largely depends on the activation of potassium cycle with eventual modulation of mitochondrial functions and ROS production. However, generally these effects were studied in the presence of Mg∙ATP known to block K+ transport. Thus, the purpose of our work was the estimation of DZ effects on K+ transport, K+ cycle and ROS production in rat liver mitochondria in the absence of Mg∙ATP. RESULTS: Without Mg·ATP, full activation of native mKATP-channel, accompanied by the increase in ATP-insensitive K+ uptake, activation of K+-cycle and respiratory uncoupling, was reached at ≤0.5 µM of DZ,. Higher diazoxide concentrations augmented ATP-insensitive K+ uptake, but not mKATP-channel activity. mKATP-channel was blocked by Mg·ATP, reactivated by DZ, and repeatedly blocked by mKATP-channel blockers glibenclamide and 5-hydroxydecanoate, whereas ATP-insensitive potassium transport was blocked by Mg2+ and was not restored by DZ. High sensitivity of potassium transport to DZ in native mitochondria resulted in suppression of mitochondrial ROS production caused by the activation of K+-cycle on sub-micromolar scale. Based on the oxygen consumption study, the share of mKATP-channel in respiratory uncoupling by DZ was found. CONCLUSIONS: The study of mKATP-channel activation by diazoxide in the absence of MgATP discloses novel, not described earlier, aspects of mKATP-channel interaction with this drug. High sensitivity of mKATP-channel to DZ results in the modulation of mitochondrial functions and ROS production by DZ on sub-micromolar concentration scale. Our experiments led us to the hypothesis that under the conditions marked by ATP deficiency affinity of mKATP-channel to DZ can increase, which might contribute to the high effectiveness of this drug in cardio- and neuroprotection.


Assuntos
Trifosfato de Adenosina/metabolismo , Diazóxido/farmacologia , Mitocôndrias Hepáticas/efeitos dos fármacos , Canais de Potássio/metabolismo , Potássio/metabolismo , Animais , Ácidos Decanoicos/farmacologia , Metabolismo Energético/efeitos dos fármacos , Feminino , Glibureto/farmacologia , Hidroxiácidos/farmacologia , Transporte de Íons/efeitos dos fármacos , Transporte de Íons/genética , Canais KATP/metabolismo , Magnésio/metabolismo , Mitocôndrias Hepáticas/metabolismo , Consumo de Oxigênio/efeitos dos fármacos , Bloqueadores dos Canais de Potássio/metabolismo , Bloqueadores dos Canais de Potássio/farmacologia , Canais de Potássio/genética , Ratos , Ratos Wistar , Espécies Reativas de Oxigênio/metabolismo
6.
Gene ; 641: 25-34, 2018 Jan 30.
Artigo em Inglês | MEDLINE | ID: mdl-29032150

RESUMO

Schizophrenia (SCZ) is a chronic debilitating neuropsychiatric disorder with multiple risk factors involving numerous complex genetic influences. We examined and updated a master list of clinically relevant and susceptibility genes associated with SCZ reported in the literature and genomic databases dedicated to gene discovery for characterization of SCZ genes. We used the commercially available GeneAnalytics computer-based gene analysis program and integrated genomic databases to create a molecular profile of the updated list of 608 SCZ genes to model their impact in select categories (tissues and cells, diseases, pathways, biological processes, molecular functions, phenotypes and compounds) using specialized GeneAnalytics algorithms. Genes for schizophrenia were predominantly expressed in the cerebellum, cerebral cortex, medulla oblongata, thalamus and hypothalamus. Psychiatric/behavioral disorders incorporating SCZ genes included ADHD, bipolar disorder, autism spectrum disorder and alcohol dependence as well as cancer, Alzheimer's and Parkinson's disease, sleep disturbances and inflammation. Function based analysis of major biological pathways and mechanisms associated with SCZ genes identified glutaminergic receptors (e.g., GRIA1, GRIN2, GRIK4, GRM5), serotonergic receptors (e.g., HTR2A, HTR2C), GABAergic receptors (e.g., GABRA1, GABRB2), dopaminergic receptors (e.g., DRD1, DRD2), calcium-related channels (e.g., CACNA1H, CACNA1B), solute transporters (e.g., SLC1A1, SLC6A2) and for neurodevelopment (e.g., ADCY1, MEF2C, NOTCH2, SHANK3). Biological mechanisms involving synaptic transmission, regulation of membrane potential and transmembrane ion transport were identified as leading molecular functions associated with SCZ genes. Our approach to interrogate SCZ genes and their interactions at various levels has increased our knowledge and insight into the disease process possibly opening new avenues for therapeutic intervention.


Assuntos
Estudo de Associação Genômica Ampla , Transporte de Íons/genética , Potenciais da Membrana/genética , Esquizofrenia/genética , Transmissão Sináptica/genética , Sistemas de Transporte de Aminoácidos/genética , Canais de Cálcio/genética , Cerebelo/citologia , Córtex Cerebral/citologia , Bases de Dados Genéticas , Humanos , Hipotálamo/citologia , Bulbo/citologia , Receptores Dopaminérgicos/genética , Receptores de GABA-A/genética , Receptores Ionotrópicos de Glutamato/genética , Receptores de Serotonina/genética , Tálamo/citologia
7.
Aliment Pharmacol Ther ; 42(7): 922-33, 2015 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-26238858

RESUMO

BACKGROUND: Successful eradication of Helicobacter pylori is becoming more difficult, mainly due to emerging antibiotic resistance. Treatment regimens containing bismuth have increased efficacy, but the mechanism is unknown. Helicobacter pylori is a neutralophile adapted to survive the acidic gastric environment via acid acclimation, but demonstrates more robust growth at neutral pH. Many antibiotics used to treat H. pylori rely on bacterial growth. AIM: To investigate the mechanism of increased efficacy of bismuth-containing H. pylori treatment regimens. METHODS: RNAseq and qPCR, urease activity in permeabilised and intact bacteria, internal pH and membrane potential were measured with and without colloidal bismuth subcitrate (CBS). Bacterial survival was assessed with CBS and/or ampicillin. RESULTS: Genes involved with metabolism and growth were upregulated in the presence of CBS at acidic pH. Urease activity of permeabilised H. pylori at pH 7.4 and 4.5 decreased in the presence of CBS, but intact urease activity decreased only at acidic pH. The fall in cytoplasmic pH with external acidification was diminished by CBS. The increase in membrane potential in response to urea addition at acidic medium pH was unaffected by CBS. The impact of CBS and ampicillin on H. pylori survival was greater than either agent alone. CONCLUSIONS: Bismuth is not acting directly on urease or the urea channel. Colloidal bismuth subcitrate impedes proton entry into the bacteria, leading to a decrease in the expected fall in cytoplasmic pH. With cytoplasmic pH remaining within range for increased metabolic activity of a neutralophile, the efficacy of growth-dependent antibiotics is augmented.


Assuntos
Antibacterianos/uso terapêutico , Infecções por Helicobacter/tratamento farmacológico , Helicobacter pylori/crescimento & desenvolvimento , Transporte de Íons/efeitos dos fármacos , Compostos Organometálicos/farmacologia , Antiácidos/administração & dosagem , Antiácidos/farmacologia , Antibacterianos/administração & dosagem , Coloides , Regulação Bacteriana da Expressão Gênica/efeitos dos fármacos , Infecções por Helicobacter/metabolismo , Infecções por Helicobacter/microbiologia , Helicobacter pylori/efeitos dos fármacos , Helicobacter pylori/genética , Humanos , Concentração de Íons de Hidrogênio , Transporte de Íons/genética , Testes de Sensibilidade Microbiana , Viabilidade Microbiana/efeitos dos fármacos , Compostos Organometálicos/administração & dosagem , Prótons
8.
BMC Genet ; 14: 94, 2013 Sep 25.
Artigo em Inglês | MEDLINE | ID: mdl-24066663

RESUMO

BACKGROUND: General, breed- and diet-dependent associations between feed efficiency in beef cattle and single nucleotide polymorphisms (SNPs) or haplotypes were identified on a population of 1321 steers using a 50 K SNP panel. Genomic associations with traditional two-step indicators of feed efficiency - residual feed intake (RFI), residual average daily gain (RADG), and residual intake gain (RIG) - were compared to associations with two complementary one-step indicators of feed efficiency: efficiency of intake (EI) and efficiency of gain (EG). Associations uncovered in a training data set were evaluated on independent validation data set. A multi-SNP model was developed to predict feed efficiency. Functional analysis of genes harboring SNPs significantly associated with feed efficiency and network visualization aided in the interpretation of the results. RESULTS: For the five feed efficiency indicators, the numbers of general, breed-dependent, and diet-dependent associations with SNPs (P-value < 0.0001) were 31, 40, and 25, and with haplotypes were six, ten, and nine, respectively. Of these, 20 SNP and six haplotype associations overlapped between RFI and EI, and five SNP and one haplotype associations overlapped between RADG and EG. This result confirms the complementary value of the one and two-step indicators. The multi-SNP models included 89 SNPs and offered a precise prediction of the five feed efficiency indicators. The associations of 17 SNPs and 7 haplotypes with feed efficiency were confirmed on the validation data set. Nine clusters of Gene Ontology and KEGG pathway categories (mean P-value < 0.001) including, 9nucleotide binding; ion transport, phosphorous metabolic process, and the MAPK signaling pathway were overrepresented among the genes harboring the SNPs associated with feed efficiency. CONCLUSIONS: The general SNP associations suggest that a single panel of genomic variants can be used regardless of breed and diet. The breed- and diet-dependent associations between SNPs and feed efficiency suggest that further refinement of variant panels require the consideration of the breed and management practices. The unique genomic variants associated with the one- and two-step indicators suggest that both types of indicators offer complementary description of feed efficiency that can be exploited for genome-enabled selection purposes.


Assuntos
Bovinos/genética , Bovinos/metabolismo , Ingestão de Alimentos , Genoma , Polimorfismo de Nucleotídeo Único , Animais , Análise por Conglomerados , Redes Reguladoras de Genes , Genótipo , Haplótipos , Transporte de Íons/genética , Sistema de Sinalização das MAP Quinases/genética , Fenótipo , Fósforo/metabolismo , Proteínas Serina-Treonina Quinases/genética , Proteínas Serina-Treonina Quinases/metabolismo
9.
Proc Natl Acad Sci U S A ; 110(21): 8732-7, 2013 May 21.
Artigo em Inglês | MEDLINE | ID: mdl-23650380

RESUMO

Voltage-gated KCNQ1 (Kv7.1) potassium channels are expressed abundantly in heart but they are also found in multiple other tissues. Differential coassembly with single transmembrane KCNE beta subunits in different cell types gives rise to a variety of biophysical properties, hence endowing distinct physiological roles for KCNQ1-KCNEx complexes. Mutations in either KCNQ1 or KCNE1 genes result in diseases in brain, heart, and the respiratory system. In addition to complexities arising from existence of five KCNE subunits, KCNE1 to KCNE5, recent studies in heterologous systems suggest unorthodox stoichiometric dynamics in subunit assembly is dependent on KCNE expression levels. The resultant KCNQ1-KCNE channel complexes may have a range of zero to two or even up to four KCNE subunits coassembling per KCNQ1 tetramer. These findings underscore the need to assess the selectivity of small-molecule KCNQ1 modulators on these different assemblies. Here we report a unique small-molecule gating modulator, ML277, that potentiates both homomultimeric KCNQ1 channels and unsaturated heteromultimeric (KCNQ1)4(KCNE1)n (n < 4) channels. Progressive increase of KCNE1 or KCNE3 expression reduces efficacy of ML277 and eventually abolishes ML277-mediated augmentation. In cardiomyocytes, the slowly activating delayed rectifier potassium current, or IKs, is believed to be a heteromultimeric combination of KCNQ1 and KCNE1, but it is not entirely clear whether IKs is mediated by KCNE-saturated KCNQ1 channels or by channels with intermediate stoichiometries. We found ML277 effectively augments IKs current of cultured human cardiomyocytes and shortens action potential duration. These data indicate that unsaturated heteromultimeric (KCNQ1)4(KCNE1)n channels are present as components of IKs and are pharmacologically distinct from KCNE-saturated KCNQ1-KCNE1 channels.


Assuntos
Canal de Potássio KCNQ1/metabolismo , Proteínas Musculares/metabolismo , Miócitos Cardíacos/metabolismo , Piperidinas/farmacologia , Canais de Potássio de Abertura Dependente da Tensão da Membrana/metabolismo , Multimerização Proteica/efeitos dos fármacos , Tiazóis/farmacologia , Compostos de Tosil/farmacologia , Potenciais de Ação/efeitos dos fármacos , Potenciais de Ação/genética , Animais , Células CHO , Cricetinae , Cricetulus , Células HEK293 , Humanos , Transporte de Íons/efeitos dos fármacos , Transporte de Íons/genética , Canal de Potássio KCNQ1/genética , Proteínas Musculares/genética , Miócitos Cardíacos/citologia , Potássio/metabolismo , Canais de Potássio de Abertura Dependente da Tensão da Membrana/genética
10.
Headache ; 52 Suppl 2: 107-10, 2012 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-23030542

RESUMO

BACKGROUND: Migraine is a common form of headache affecting about 12% of the population. Genetic studies in the rare form of familial hemiplegic migraine have identified mutations in 3 genes (CACNA1A, ATP1A2, and SCN1A) encoding proteins involved in ion homeostasis and suggesting that other such genes may be involved in the more common forms of migraine. OBJECTIVES: To test this proposition, the coding regions of 150 brain-expressed genes involved in ion homeostasis (ion channels, transporters, exchangers, and accessory subunits) were systematically screened to identify DNA variants in a group of 110 migraine probands and 250 control samples. METHODS: DNA variants were analyzed using a number of complementary in silico approaches. RESULTS: Several genes encoding potassium channels, including KCNK18, KCNG4, and KCNAB3, were identified as potentially linked to migraine. In situ hybridization studies of the mouse Kcnk18 ortholog show that it is developmentally expressed in the trigeminal and dorsal root ganglia, further supporting the involvement of this gene in migraine pathogenesis. CONCLUSIONS: Our study is the first to link variations in these K(+) channel genes to migraine, thus expanding on the view of migraine as a channelopathy and providing potential molecular targets for further study and therapeutic applications.


Assuntos
Canais Iônicos/genética , Transtornos de Enxaqueca/genética , Estudos de Associação Genética , Humanos , Transporte de Íons/genética
11.
Birth Defects Res A Clin Mol Teratol ; 88(2): 111-27, 2010 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-19813261

RESUMO

BACKGROUND: Previous studies show gene expression alterations in rat embryo hearts and cell lines that correspond to the cardio-teratogenic effects of trichloroethylene (TCE) in animal models. One potential mechanism of TCE teratogenicity may be through altered regulation of calcium homeostatic genes with a corresponding inhibition of cardiac function. It has been suggested that TCE may interfere with the folic acid/methylation pathway in liver and kidney and alter gene regulation by epigenetic mechanisms. According to this hypothesis, folate supplementation in the maternal diet should counteract TCE effects on gene expression in the embryonic heart. APPROACH: To identify transcriptional targets altered in the embryonic heart after exposure to TCE, and possible protective effects of folate, we used DNA microarray technology to profile gene expression in embryonic mouse hearts with maternal TCE exposure and dietary changes in maternal folate. RESULTS: Exposure to low doses of TCE (10 ppb) caused extensive alterations in transcripts encoding proteins involved in transport, ion channel, transcription, differentiation, cytoskeleton, cell cycle, and apoptosis. Exogenous folate did not offset the effects of TCE exposure on normal gene expression, and both high and low levels of folate produced additional significant changes in gene expression. CONCLUSIONS: A mechanism by which TCE induces a folate deficiency does not explain altered gene expression patterns in the embryonic mouse heart. The data further suggest that use of folate supplementation, in the presence of this toxin, may be detrimental and not protective of the developing embryo.


Assuntos
Anormalidades Induzidas por Medicamentos/genética , Perfilação da Expressão Gênica , Cardiopatias Congênitas/induzido quimicamente , Coração/efeitos dos fármacos , Teratogênicos/toxicidade , Tricloroetileno/toxicidade , Poluentes Químicos da Água/toxicidade , Anormalidades Induzidas por Medicamentos/prevenção & controle , Animais , Apoptose , Diferenciação Celular/efeitos dos fármacos , Diferenciação Celular/genética , Suplementos Nutricionais/efeitos adversos , Feminino , Ácido Fólico/administração & dosagem , Deficiência de Ácido Fólico/induzido quimicamente , Deficiência de Ácido Fólico/complicações , Coração/crescimento & desenvolvimento , Cardiopatias Congênitas/genética , Cardiopatias Congênitas/prevenção & controle , Canais Iônicos/efeitos dos fármacos , Canais Iônicos/genética , Transporte de Íons/efeitos dos fármacos , Transporte de Íons/genética , Camundongos , Organogênese/efeitos dos fármacos , Organogênese/genética , Gravidez , Ratos , Tricloroetileno/antagonistas & inibidores , Poluentes Químicos da Água/antagonistas & inibidores
12.
Biometals ; 22(6): 1051-61, 2009 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19649569

RESUMO

Pichia guilliermondii is a representative of yeast species that overproduce riboflavin (vitamin B2) in response to iron deprivation. P. guilliermondii YFH1 gene coding for frataxin homologue, eukaryotic mitochondrial protein involved in iron trafficking and storage, was identified and deleted. Constructed P. guilliermondii Δyfh1 mutant grew very poorly in a sucrose-containing synthetic medium supplemented with sulfate or sulfite as a sole sulfur source. Addition of sodium sulfide, glutathione, cysteine, methionine, N-acetyl-L-cysteine partially restored growth rate of the mutant suggesting that it is impaired in sulfate assimilation. Cellular iron content in Δyfh1 mutant was ~3-3.5 times higher as compared to the parental strain. It produced 50-70 times more riboflavin in iron sufficient synthetic media relative to the parental wildtype strain. Biomass yield of the mutant in the synthetic glutathione containing medium supplemented with glycerol as a sole carbon source was 1.4- and 2.6-fold increased as compared to sucrose and succinate containing media, respectively. Oxygen uptake of the Δyfh1 mutant on sucrose, glycerol or succinate, when compared to the parental strain, was decreased 5.5-, 1.7- and 1.5-fold, respectively. Substitution of sucrose or glycerol in the synthetic iron sufficient medium with succinate completely abolished riboflavin overproduction by the mutants. Deletion of the YFH1 gene caused hypersensitivity to hydrogen peroxide and exogenously added riboflavin and led to alterations in superoxide dismutase activities. Thus, deletion of the gene coding for yeast frataxin homologue has pleiotropic effect on metabolism in P. guilliermondii.


Assuntos
Proteínas Fúngicas/metabolismo , Proteínas de Ligação ao Ferro/metabolismo , Ferro/metabolismo , Organismos Geneticamente Modificados/metabolismo , Pichia/metabolismo , Riboflavina/farmacologia , Proteínas Fúngicas/genética , Deleção de Genes , Glicerol/metabolismo , Peróxido de Hidrogênio/farmacologia , Transporte de Íons/efeitos dos fármacos , Transporte de Íons/genética , Proteínas de Ligação ao Ferro/genética , Mitocôndrias/metabolismo , Organismos Geneticamente Modificados/genética , Pichia/genética , Riboflavina/biossíntese , Riboflavina/genética , Ácido Succínico/metabolismo , Sacarose/metabolismo , Compostos de Enxofre/metabolismo , Ésteres do Ácido Sulfúrico/metabolismo , Superóxido Dismutase/análise , Frataxina
14.
J Biol Chem ; 282(51): 37053-63, 2007 Dec 21.
Artigo em Inglês | MEDLINE | ID: mdl-17954933

RESUMO

In vitro studies have demonstrated that ZNT7 is involved in transporting the cytoplasmic zinc into the Golgi apparatus of the cell for zinc storage or to be incorporated into newly synthesized zinc-requiring enzymes/proteins. To evaluate the physiological role of ZNT7, we created a mouse model of Znt7 deficiency by a gene-trap approach. Znt7-deficient mice were zinc-deficient based on their low zinc content in serum, liver, bone, kidney, and small intestine. In embryonic fibroblasts isolated from Znt7-deficient mice, cellular zinc was approximately 50% that of wild-type controls. Znt7-deficient mice also displayed some classic manifestations of dietary zinc deficiency, such as reduced food intake and poor body weight gain. However, the mutant mice did not show any sign of hair abnormality and dermatitis that are commonly associated with dietary zinc deficiency. A radioactive feeding study suggested that Znt7-deficient mice had reduced zinc absorption in the gut resulting in decreased zinc accumulations in other organs in the body. The poor growth found in Znt7-deficient mice could not be corrected by feeding the mutant mice with a diet containing 6-fold higher zinc (180 mg/kg) than the suggested adequate intake amount (30 mg/kg). Furthermore, the reduced body weight gain of the mutant mice was largely due to the decrease in body fat accumulation. We conclude that ZNT7 has essential functions in dietary zinc absorption and in regulation of body adiposity.


Assuntos
Tecido Adiposo/metabolismo , Peso Corporal , Proteínas de Transporte de Cátions/metabolismo , Citoplasma/metabolismo , Complexo de Golgi/metabolismo , Zinco/metabolismo , Tecido Adiposo/patologia , Adiposidade/efeitos dos fármacos , Adiposidade/genética , Adsorção/efeitos dos fármacos , Animais , Peso Corporal/efeitos dos fármacos , Peso Corporal/genética , Proteínas de Transporte de Cátions/genética , Citoplasma/patologia , Dermatite/genética , Dermatite/metabolismo , Dermatite/patologia , Suplementos Nutricionais , Ingestão de Alimentos/genética , Complexo de Golgi/patologia , Cabelo/anormalidades , Cabelo/metabolismo , Transporte de Íons/efeitos dos fármacos , Transporte de Íons/genética , Camundongos , Camundongos Knockout , Especificidade de Órgãos/genética , Zinco/deficiência , Zinco/farmacologia
15.
FEBS Lett ; 581(12): 2255-62, 2007 May 25.
Artigo em Inglês | MEDLINE | ID: mdl-17418140

RESUMO

Soluble aluminium (Al(3+)) is the major constraint to plant growth on acid soils. Plants have evolved mechanisms to tolerate Al(3+) and one type of mechanism relies on the efflux of organic anions that protect roots by chelating the Al(3+). Al(3+) resistance genes of several species have now been isolated and found to encode membrane proteins that facilitate organic anion efflux from roots. These proteins belong to the Al(3+)-activated malate transporter (ALMT) and multi-drug and toxin extrusion (MATE) families. We review the roles of these proteins in Al(3+) resistance as well as their roles in other aspects of mineral nutrition.


Assuntos
Alumínio/toxicidade , Proteínas de Membrana Transportadoras/metabolismo , Transportadores de Ânions Orgânicos/metabolismo , Proteínas de Plantas/metabolismo , Plantas/efeitos dos fármacos , Plantas/metabolismo , Transportadores de Cassetes de Ligação de ATP/química , Transportadores de Cassetes de Ligação de ATP/genética , Transportadores de Cassetes de Ligação de ATP/metabolismo , Evolução Biológica , Resistência a Medicamentos/genética , Genes de Plantas , Transporte de Íons/genética , Proteínas de Membrana Transportadoras/química , Proteínas de Membrana Transportadoras/genética , Minerais/metabolismo , Modelos Biológicos , Modelos Moleculares , Transportadores de Ânions Orgânicos/química , Transportadores de Ânions Orgânicos/genética , Fósforo/metabolismo , Filogenia , Proteínas de Plantas/química , Proteínas de Plantas/genética , Plantas/genética , Estrutura Secundária de Proteína
16.
J Bacteriol ; 188(4): 1473-88, 2006 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-16452431

RESUMO

The complete genome sequence of Thiobacillus denitrificans ATCC 25259 is the first to become available for an obligately chemolithoautotrophic, sulfur-compound-oxidizing, beta-proteobacterium. Analysis of the 2,909,809-bp genome will facilitate our molecular and biochemical understanding of the unusual metabolic repertoire of this bacterium, including its ability to couple denitrification to sulfur-compound oxidation, to catalyze anaerobic, nitrate-dependent oxidation of Fe(II) and U(IV), and to oxidize mineral electron donors. Notable genomic features include (i) genes encoding c-type cytochromes totaling 1 to 2 percent of the genome, which is a proportion greater than for almost all bacterial and archaeal species sequenced to date, (ii) genes encoding two [NiFe]hydrogenases, which is particularly significant because no information on hydrogenases has previously been reported for T. denitrificans and hydrogen oxidation appears to be critical for anaerobic U(IV) oxidation by this species, (iii) a diverse complement of more than 50 genes associated with sulfur-compound oxidation (including sox genes, dsr genes, and genes associated with the AMP-dependent oxidation of sulfite to sulfate), some of which occur in multiple (up to eight) copies, (iv) a relatively large number of genes associated with inorganic ion transport and heavy metal resistance, and (v) a paucity of genes encoding organic-compound transporters, commensurate with obligate chemolithoautotrophy. Ultimately, the genome sequence of T. denitrificans will enable elucidation of the mechanisms of aerobic and anaerobic sulfur-compound oxidation by beta-proteobacteria and will help reveal the molecular basis of this organism's role in major biogeochemical cycles (i.e., those involving sulfur, nitrogen, and carbon) and groundwater restoration.


Assuntos
Genoma Bacteriano , Thiobacillus/genética , Proteínas de Bactérias/genética , Citocromos c/genética , Hidrogenase/genética , Transporte de Íons/genética , Metais Pesados/farmacologia , Dados de Sequência Molecular , Oxirredução , Compostos de Enxofre/metabolismo , Thiobacillus/efeitos dos fármacos , Thiobacillus/metabolismo , Urânio/metabolismo
17.
FEBS Lett ; 579(7): 1723-31, 2005 Mar 14.
Artigo em Inglês | MEDLINE | ID: mdl-15757667

RESUMO

Potassium uptake defective Saccharomyces cerevisiae strains (Deltatrk1,2 and Deltatrk1,2 Deltatok1) were used for the phenotypic analysis of the mouse inward rectifying Kir2.1 channel by growth analysis. Functional expression of both, multi-copy plasmid and chromosomally expressed GFP-mKir2.1 fusion constructs complemented the potassium uptake deficient phenotype in a pHout dependent manner. Upon application of Hygromycin B to chromosomally mKir2.1 expressing cells, significantly lower toxin sensitivity (EC50 15.4 microM) compared to Deltatrk1,2 Deltatok1 cells (EC50 2.6 microM) was observed. Growth determination of mKir2.1 expressing strains upon application of Ag+, Cs+ and Ba2+ as known blockers of mKir2.1 channels revealed significantly decreased channel function. Cells with mKir2.1 were about double sensitive to AgNO3, 350-fold more sensitive to CsCl and 1500-fold more sensitive to BaCl2 in comparison to the respective controls indicating functional expression and correct pharmacology.


Assuntos
Avaliação Pré-Clínica de Medicamentos/métodos , Bloqueadores dos Canais de Potássio/farmacologia , Canais de Potássio Corretores do Fluxo de Internalização/genética , Potássio/metabolismo , Saccharomyces cerevisiae/genética , Animais , Proteínas de Transporte de Cátions/genética , Teste de Complementação Genética , Higromicina B/farmacologia , Transporte de Íons/genética , Transporte de Íons/fisiologia , Camundongos , Mutação/genética , Potássio/análise , Canais de Potássio Corretores do Fluxo de Internalização/análise , Canais de Potássio Corretores do Fluxo de Internalização/metabolismo , Saccharomyces cerevisiae/química , Saccharomyces cerevisiae/crescimento & desenvolvimento , Proteínas de Saccharomyces cerevisiae/genética
18.
Neurology ; 63(12): 2371-5, 2004 Dec 28.
Artigo em Inglês | MEDLINE | ID: mdl-15623702

RESUMO

BACKGROUND: Muscle fiber degeneration and myotonic discharges are the hallmarks of myotonic dystrophy (DM). The molecular basis for the myotonia was recently tied to abnormal splicing of the chloride channel (ClC-1) pre-mRNA, often resulting in UAG premature termination, which leads to decreased channel protein and therefore a reduced resting chloride conductance. METHODS: The authors assessed the functional properties of two commonly occurring DM mRNA splice variants by expression in oocytes. RESULTS: Neither splice variant coded for a functional Cl- channel. Co-injection of alternative splice variants with wild-type ClC-1 cRNA reduced the current density and accelerated channel closure upon repolarization of the membrane. CONCLUSIONS: These data show that the aberrantly spliced chloride channel message exerts a dominant negative effect that may contribute to the development of myotonia.


Assuntos
Processamento Alternativo , Canais de Cloreto/genética , Cloretos/metabolismo , Códon sem Sentido , Distrofia Miotônica/genética , Precursores de RNA/genética , RNA Mensageiro/genética , Animais , DNA Complementar/genética , Éxons/genética , Feminino , Mutação da Fase de Leitura , Humanos , Transporte de Íons/genética , Potenciais da Membrana , Microinjeções , Modelos Moleculares , Oócitos , Técnicas de Patch-Clamp , Conformação Proteica , RNA/genética , Xenopus laevis
19.
Am J Clin Nutr ; 80(4): 924-31, 2004 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-15447900

RESUMO

BACKGROUND: Research conducted before genotyping was possible suggested that subjects heterozygous for the genetic mutation associated with hemochromatosis absorbed nonheme iron more efficiently than did control subjects when tested with a fortified meal. Heme-iron absorption in these subjects has not been reported. OBJECTIVE: We compared the absorption of heme and nonheme iron from minimally or highly fortified test meals between HFE C282Y-heterozygous and wild-type control subjects. DESIGN: After prospective genotyping of 256 healthy volunteers, 11 C282Y-heterozygous and 12 wild-type control subjects were recruited, and their iron absorption was compared by using a hamburger test meal with or without added iron and ascorbic acid. After retrospective genotyping of 103 participants in previous iron-absorption studies, 5 C282Y-heterozygous subjects were compared with 72 wild-type control subjects. RESULTS: HFE C282Y-heterozygous subjects did not differ significantly from wild-type control subjects in their absorption of either heme or nonheme iron from minimally or highly fortified test meals. No differences were detected in blood indexes of iron status (including serum ferritin, transferrin saturation, and non-transferrin-bound iron) or in blood lipids or transaminases, but heterozygotes had significantly greater, although normal, fasting glucose concentrations than did wild-type control subjects. Compound heterozygotes (those who had both HFE C282Y and H63D mutations) absorbed more nonheme (but not heme) iron from meals with high (but not low) iron bioavailability. CONCLUSIONS: HFE C282Y-heterozygous subjects did not absorb dietary iron more efficiently, even when foods were highly fortified with iron from ferrous sulfate and ascorbic acid, than did control subjects. Iron fortification of foods should not pose an additional health risk to HFE C282Y heterozygotes.


Assuntos
Ácido Ascórbico/farmacologia , Hemocromatose/genética , Hemocromatose/metabolismo , Antígenos de Histocompatibilidade Classe I/genética , Ferro da Dieta/farmacocinética , Ferro/metabolismo , Proteínas de Membrana/genética , Adulto , Idoso , Anemia Ferropriva/epidemiologia , Estudos de Casos e Controles , Feminino , Ferritinas/sangue , Alimentos Fortificados , Genótipo , Proteína da Hemocromatose , Heterozigoto , Homozigoto , Humanos , Absorção Intestinal , Transporte de Íons/genética , Transporte de Íons/fisiologia , Ferro da Dieta/metabolismo , Masculino , Pessoa de Meia-Idade , Mutação , Estudos Prospectivos , Estudos Retrospectivos
20.
Hypertension ; 43(6): 1175-81, 2004 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-15148291

RESUMO

The chloride channel ClC-Kb is expressed in the basolateral cell membrane of the distal nephron and participates in renal NaCl reabsorption. Loss-of-function mutations of ClC-Kb lead to classic Bartter syndrome, a rare salt-wasting disorder. Recently, we identified the ClC-Kb(T481S) polymorphism, which confers a strong gain-of-function effect on the ClC-Kb chloride channel. The present study has been performed to explore the prevalence of the mutation and its functional significance in renal salt handling and blood pressure regulation. As evident from electrophysiological analysis with the 2-electrode voltage-clamp technique, heterologous expression of ClC-Kb(T481S) in Xenopus oocytes gave rise to a current that was 7-fold larger than the current produced by wild-type ClC-Kb. The prevalence of the mutant allele was significantly higher in an African population from Ghana (22%) than in whites (12%). As tested in 1 white population, carriers of ClC-Kb(T481S) were associated with significantly higher systolic (by approximately 6.0 mm Hg) and diastolic (by approximately 4.2 mm Hg) blood pressures and significantly higher prevalence (45% versus 25%) of hypertensive (> or =140/90 mm Hg) blood pressure levels. Individuals carrying ClC-Kb(T481S) had significantly higher plasma Na+ concentrations and significantly decreased glomerular filtration rate. In conclusion, the mutation ClC-Kb(T481S) of the renal epithelial Cl- channel ClC-Kb strongly activates ClC-Kb chloride channel function in vitro and may predispose to the development of essential hypertension in vivo.


Assuntos
Substituição de Aminoácidos , Proteínas de Transporte de Ânions/genética , Canais de Cloreto/genética , Hipertensão/genética , Proteínas de Membrana/genética , Mutação de Sentido Incorreto , Mutação Puntual , Adulto , Animais , Proteínas de Transporte de Ânions/metabolismo , População Negra/genética , Canais de Cloreto/metabolismo , Cloretos/metabolismo , Análise Mutacional de DNA , Feminino , Predisposição Genética para Doença , Alemanha , Gana , Humanos , Transporte de Íons/genética , Masculino , Proteínas de Membrana/metabolismo , Natriurese/genética , Néfrons/metabolismo , Oócitos , Técnicas de Patch-Clamp , Potássio/metabolismo , RNA Complementar/genética , Sódio/metabolismo , População Branca/genética , Xenopus laevis
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