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1.
Plant J ; 27(5): 383-91, 2001 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-11576423

RESUMEN

Two hairpin-loop domains in cystatin family proteinase inhibitors form an interface surface region that slots into the active site cleft of papain-like cysteine proteinases, and determine binding affinity. The slot region surface architecture of the soybean cysteine proteinase inhibitor (soyacystatin N, scN) was engineered using techniques of in vitro molecular evolution to define residues that facilitate interaction with the proteinase cleft and modulate inhibitor affinity and function. Combinatorial phage display libraries of scN variants that contain mutations in the essential motifs of the first (QVVAG) and second (EW) hairpin-loop regions were constructed. Approximately 1010-1011 phages expressing recombinant scN proteins were subjected to biopanning selection based on binding affinity to immobilized papain. The QVVAG motif in the first hairpin loop was invariant in all functional scN proteins. All selected variants (30) had W79 in the second hairpin-loop motif, but there was diversity for hydrophobic and basic amino acids in residue 78. Kinetic analysis of isolated scN variants identified a novel scN isoform scN(LW) with higher papain affinity than the wild-type molecule. The variant contained an E78L substitution and had a twofold lower Ki (2.1 pM) than parental scN, due to its increased association rate constant (2.6 +/- 0.09 x 107 M-1sec-1). These results define residues in the first and second hairpin-loop regions which are essential for optimal interaction between phytocystatins and papain, a prototypical cysteine proteinase. Furthermore, the isolated variants are a biochemical platform for further integration of mutations to optimize cystatin affinity for specific biological targets.


Asunto(s)
Cistatinas/metabolismo , Inhibidores de Cisteína Proteinasa/metabolismo , Papaína/antagonistas & inhibidores , Secuencia de Bases , Cistatinas/genética , Inhibidores de Cisteína Proteinasa/genética , Evolución Molecular Dirigida , Variación Genética , Datos de Secuencia Molecular , Mutagénesis , Mutación , Biblioteca de Péptidos , Estructura Secundaria de Proteína , Proteínas Recombinantes/metabolismo , Proteínas de Soja
2.
Biol Chem ; 382(1): 97-107, 2001 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-11258679

RESUMEN

Within the cystatin superfamily, only kininogen domain 2 (KD2) is able to inhibit mu- and m-calpain. In an attempt to elucidate the structural requirements of cystatins for calpain inhibition, we constructed recombinant hybrids of human stefin B (an intracellular family 1 cystatin) with KD2 and deltaL110 deletion mutants of chicken cystatin-KD2 hybrids. Substitution of the N-terminal contact region of stefin B by the corresponding KD2 sequence resulted in a calpain inhibitor of Ki = 188 nM. Deletion of L110, which forms a beta-bulge in family 1 and 2 cystatins but is lacking in KD2, improved inhibition of mu-calpain 4- to 8-fold. All engineered cystatins were temporary inhibitors of calpain due to slow substrate-like cleavage of a single peptide bond corresponding to Gly9-Ala10 in chicken cystatin. Biomolecular interaction analysis revealed that, unlike calpastatin, the cystatin-type inhibitors do not bind to the calmodulin-like domain of the small subunit of calpain, and their interaction with the mu-calpain heterodimer is completely prevented by a synthetic peptide comprising subdomain B of calpastatin domain 1. Based on these results we propose that (i) cystatin-type calpain inhibitors interact with the active site of the catalytic domain of calpain in a similar cystatin-like mode as with papain and (ii) the potential for calpain inhibition is due to specific subsites within the papain-binding regions of the general cystatin fold.


Asunto(s)
Calpaína/antagonistas & inhibidores , Dominio Catalítico/genética , Pollos/metabolismo , Cistatinas/genética , Inhibidores de Cisteína Proteinasa/genética , Quininógenos/genética , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Calpaína/genética , Calpaína/metabolismo , Catálisis , Clonación Molecular , Cistatina B , Cistatinas/aislamiento & purificación , Electroforesis en Gel de Poliacrilamida , Eritrocitos/química , Humanos , Espectrometría de Masas , Datos de Secuencia Molecular , Mutagénesis , Proteínas Recombinantes de Fusión/biosíntesis , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/aislamiento & purificación , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa
3.
Biol Chem ; 382(12): 1733-7, 2001 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-11843187

RESUMEN

Heterodimeric p-calpain, consisting of the large (80 kDa) and the small (30 kDa) subunit, was isolated and purified from human erythrocytes by a highly reproducible four-step purification procedure. Obtained material is more than 95% pure and has a specific activity of 6-7 mU/mg. Presence of contaminating proteins could not be detected by HPLC and sequence analysis. During storage at -80 degrees C the enzyme remains fully activatable by Ca2+, although the small subunit is partially processed to a 22 kDa fragment. This novel autolysis product of the small subunit starts with the sequence 60RILG and is further processed to the known 18 kDa fragment. Active forms and typical transient and stable autolysis products of the large subunit were identified by protein sequencing. In casein-zymograms only the activatable forms 80 kDa+30 kDa, 80 kDa+22 kDa and 80 kDa+18 kDa displayed caseinolysis.


Asunto(s)
Calpaína/aislamiento & purificación , Eritrocitos/química , Autólisis/metabolismo , Calpaína/sangre , Cromatografía de Afinidad , Cromatografía en Gel , Cromatografía por Intercambio Iónico , Electroforesis en Gel de Poliacrilamida , Fluorometría , Humanos , Análisis de Secuencia de Proteína
4.
FEBS Lett ; 482(1-2): 91-6, 2000 Sep 29.
Artículo en Inglés | MEDLINE | ID: mdl-11018529

RESUMEN

Extracellular cysteine proteases, in particular cathepsin B, have been implicated in a variety of pathological processes. Selectively targeting labels of this enzyme are important tools to gain more detailed understanding of its specific roles. Starting from our recently developed irreversible epoxysuccinyl-based inhibitor (R-Gly-Gly-Leu-(2S,3S)-tEps-Leu-Pro-OH, R=OMe), we have synthesized two affinity labels, R=NH-(CH(2))(6)-NH-rhodamine B and R=NH-(CH(2))(6)-NH-biotin. Using MCF-7 cells, the labeled inhibitors were shown to be virtually non-cell-permeant. Moreover, affinity blot analysis with the biotinylated inhibitor allowed a highly sensitive and selective non-radioactive detection of active cathepsin B.


Asunto(s)
Marcadores de Afinidad/síntesis química , Biotina/análogos & derivados , Catepsina B/química , Catepsina B/metabolismo , Endopeptidasas , Oligopéptidos/síntesis química , Rodaminas/síntesis química , Marcadores de Afinidad/química , Biotina/síntesis química , Biotina/química , Biotina/farmacología , Catepsina L , Catepsinas/química , Catepsinas/metabolismo , Cisteína Endopeptidasas , Humanos , Indicadores y Reactivos , Cinética , Estructura Molecular , Oligopéptidos/química , Oligopéptidos/farmacología , Rodaminas/química , Rodaminas/farmacología
5.
J Biol Chem ; 275(43): 33562-6, 2000 Oct 27.
Artículo en Inglés | MEDLINE | ID: mdl-10913110

RESUMEN

Cancer invasion and metastasis is a process requiring a coordinated series of (anti-)adhesive, migratory, and pericellular proteolytic events involving various proteases such as urokinase-type plasminogen activator (uPA)/plasmin, cathepsins B and L, and matrix metalloproteases. Novel types of double-headed inhibitors directed to different tumor-associated proteolytic systems were generated by substitution of a loop in chicken cystatin, which is nonessential for cysteine protease inhibition, with uPA-derived peptides covering the human uPA receptor binding sequence uPA-(19-31). The inhibition constants of these hybrids toward cysteine proteases are similar to those of wild-type cystatin (K(i), papain (pm), 1.9-2.4; K(i), cathepsin B (nm), 1.0-1.7; K(i), cathepsin L (pm), 0.12-0.61). FACS analyses revealed that the hybrids compete for binding of uPA to the cell surface-associated uPA receptor (uPAR) expressed on human U937 cells. The simultaneous interaction of the hybrid molecules with papain and uPAR was analyzed by surface plasmon resonance. The measured K(D) value of a papain-bound cystatin variant harboring the uPAR binding sequence of uPA (chCys-uPA-(19-31)) and soluble uPAR was 17 nm (K(D) value for uPA/uPAR interaction, 5 nm). These results indicate that cystatins with a uPAR binding site are efficient inhibitors of cysteine proteases and uPA/uPAR interaction at the same time. Therefore, these compact and small bifunctional inhibitors may represent promising agents for the therapy of solid tumors.


Asunto(s)
Cistatinas/metabolismo , Inhibidores de Cisteína Proteinasa/metabolismo , Receptores de Superficie Celular/metabolismo , Secuencia de Aminoácidos , Sitios de Unión , Clonación Molecular , Cistatinas/química , Relación Dosis-Respuesta a Droga , Humanos , Datos de Secuencia Molecular , Papaína/metabolismo , Receptores del Activador de Plasminógeno Tipo Uroquinasa , Proteínas Recombinantes/metabolismo , Relación Estructura-Actividad
6.
Bioorg Med Chem Lett ; 10(7): 677-80, 2000 Apr 03.
Artículo en Inglés | MEDLINE | ID: mdl-10762052

RESUMEN

Beta-cyclodextrin is known to form inclusion complexes with hydrophobic drugs. Several tumor cell lines are known to secrete and/or contain membrane-associated cathepsin B which is possibly involved in invasion and metastasis. Based on these information, our recently developed endo-epoxysuccinyl peptide inhibitor MeO-Gly-Gly-Leu-(2S,3S)-tEps-Leu-Pro-OH for cathepsin B was conjugated with beta-cyclodextrin to obtain a site-directed drug carrier system. Furthermore, the conjugate, was shown to form an inclusion complex with the cytotoxic drug methotrexate.


Asunto(s)
Ciclodextrinas/farmacología , Portadores de Fármacos/síntesis química , Compuestos Epoxi/farmacología , Péptidos/farmacología , beta-Ciclodextrinas , Antimetabolitos Antineoplásicos/farmacología , Ciclodextrinas/síntesis química , Portadores de Fármacos/química , Portadores de Fármacos/metabolismo , Sistemas de Liberación de Medicamentos , Compuestos Epoxi/síntesis química , Humanos , Cuerpos de Inclusión/metabolismo , Metotrexato/farmacología , Péptidos/síntesis química , Células Tumorales Cultivadas
7.
Biochem J ; 340 ( Pt 1): 227-35, 1999 May 15.
Artículo en Inglés | MEDLINE | ID: mdl-10229679

RESUMEN

In the presence of ATP, genistein, like the ATP analogue adenosine 5'-[beta,gamma-imido]triphosphate (pp[NH]pA), increases cystic fibrosis transmembrane conductance regulator (CFTR) chloride currents by prolonging open times. As pp[NH]pA is thought to increase CFTR currents by interfering with ATP hydrolysis at the second nucleotide-binding fold (NBF-2), the present study was undertaken to investigate the effects of genistein on a fusion protein comprising maltose-binding protein (MBP) and NBF-2 (MBP-NBF-2). MBP-NBF-2 exhibited ATPase, GTPase and adenylate kinase activities that were inhibited by genistein in a partial non-competitive manner with respect to ATP or GTP. Ki values for competitive and uncompetitive inhibition were respectively 20 microM and 63 microM for ATPase, 15 microM and 54 microM for GTPase, and 46 microM and 142 microM for adenylate kinase. For ATPase activity, genistein reduced Vmax by 29% and Vmax/Km by 77%. Additional evidence for complex-formation between genistein and MBP-NBF-2 was obtained by the detection of genistein-dependent alterations in the CD spectrum of MBP-NBF-2 that were consistent with the formation of a higher-ordered state. Addition of MBP-NBF-2 increased the fluorescence intensity of genistein, consistent with a change to a less polar environment. pp[NH]pA partially eliminated this enhanced fluorescence of genistein. These observations provide the first direct biochemical evidence that genistein interacts with CFTR, thus inhibiting NBF-2 activity, and suggest a similar mechanism for genistein-dependent stimulation of CFTR chloride currents.


Asunto(s)
Adenosina Trifosfatasas/antagonistas & inhibidores , Adenilato Quinasa/antagonistas & inhibidores , Regulador de Conductancia de Transmembrana de Fibrosis Quística/metabolismo , GTP Fosfohidrolasas/antagonistas & inhibidores , Genisteína/farmacología , Nucleótidos/metabolismo , Adenosina Trifosfatasas/química , Adenosina Trifosfatasas/metabolismo , Adenilato Quinasa/química , Adenilato Quinasa/metabolismo , Adenilil Imidodifosfato/metabolismo , Sitios de Unión/efectos de los fármacos , Catálisis/efectos de los fármacos , Dominio Catalítico/efectos de los fármacos , Dicroismo Circular , Regulador de Conductancia de Transmembrana de Fibrosis Quística/antagonistas & inhibidores , Regulador de Conductancia de Transmembrana de Fibrosis Quística/química , Dimetilsulfóxido/farmacología , GTP Fosfohidrolasas/química , GTP Fosfohidrolasas/metabolismo , Genisteína/química , Genisteína/metabolismo , Guanosina Trifosfato/metabolismo , Humanos , Isoflavonas/farmacología , Cinética , Quercetina/farmacología , Proteínas Recombinantes de Fusión/antagonistas & inhibidores , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/metabolismo , Solubilidad/efectos de los fármacos , Solventes/farmacología , Espectrometría de Fluorescencia
8.
FEBS Lett ; 421(1): 80-2, 1998 Jan 02.
Artículo en Inglés | MEDLINE | ID: mdl-9462845

RESUMEN

Based on recent information about the anti-substrate binding mode of the propeptide portion of procathepsin B and the well established substrate-like binding of epoxysuccinyl-dipeptide carboxylates to the S' subsites of cathepsin B a new endo-trans-epoxysuccinyl peptide was synthesized that contains the dipeptide moiety Leu-Pro-OH for the P1'-P2' substrate positions and the tripeptide moiety Leu-Gly-Gly-OMe (sequence portion 46-48 of the propeptide) for the P2-P4 positions in anti-substrate orientation. With an unequivocal (2S,3S) configuration this new trans-epoxysuccinyl peptide derivative was found to inhibit cathepsin B with an apparent second-order rate constant of 1,520,000 M(-1) s(-1) which represents so far the most potent inhibitor among E-64-derived compounds. Conversely, the (2R,3R) diastereomer exhibited a significantly lower inhibition potency. This observation fully agrees with our previous findings that inhibitor/enzyme interactions at the S subsites are favored by the (2S,3S) and reverse interactions at the S' subsites by the (2R,3R) configuration of the trans-epoxysuccinyl moiety.


Asunto(s)
Catepsina B/antagonistas & inhibidores , Endopeptidasas , Oligopéptidos/farmacología , Inhibidores de Proteasas/farmacología , Catepsina L , Catepsinas/antagonistas & inhibidores , Cisteína Endopeptidasas , Humanos , Cinética , Oligopéptidos/síntesis química , Papaína/antagonistas & inhibidores
9.
Bioorg Med Chem ; 5(9): 1789-97, 1997 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-9354234

RESUMEN

A series of trans-epoxysuccinyl-peptide derivatives based on the natural inhibitor E-64 were synthesized in the (2R,3R) and (2S,3S) configuration in order to analyze the role of the stereochemistry of this residue in dictating inhibitory potency and selectivity for cysteine proteases. We confirmed that binding of E-64 like trans-epoxysuccinyl compounds is remarkably favored by the (2S,3S) configuration, but we also found that CA030-type compounds are stronger inhibitors in the (2R,3R) configuration than the related diastereomers. Consequently, the structural requirements for exploiting both the S and S' subsites are not additive and a structure-based design of bis-peptidyl derivatives of trans-epoxysuccinic acid to increase selective inhibition becomes even more difficult. Additional contrasting effects were observed for the pH optima required in the electrostatic interactions at the S and S' subsites.


Asunto(s)
Catepsina B/antagonistas & inhibidores , Inhibidores de Cisteína Proteinasa/farmacología , Leucina/análogos & derivados , Cristalografía por Rayos X , Inhibidores de Cisteína Proteinasa/química , Humanos , Concentración de Iones de Hidrógeno , Cinética , Leucina/química , Leucina/farmacología , Espectroscopía de Resonancia Magnética , Estructura Molecular , Sales (Química) , Espectrometría de Masa Bombardeada por Átomos Veloces , Estereoisomerismo
10.
FEBS Lett ; 410(2-3): 180-6, 1997 Jun 30.
Artículo en Inglés | MEDLINE | ID: mdl-9237625

RESUMEN

CFTR-NBF-2 expressed and purified in fusion with the maltose-binding protein was shown to catalyse the reaction ATP-->ADP+Pi by three different assays, monitoring ATP turnover, formation of ADP and release of Pi (Km 86 microM, rate constant 0.37 min(-1)). The reaction product ADP inhibits this ATPase activity. In a similar manner the hydrolysis of GTP to GDP and Pi was demonstrated (Km 40 microM, rate constant 0.29 min(-1)). In the presence of AMP the ATPase reaction was superseded by the formation of two ADP from ATP and AMP. As typical for adenylate kinases a distinct AMP-binding site could be verified for CFTR-NBF-2 by the inability of TNP-ATP and AMP to compete for binding. All three enzymatic activities were inhibited by the symmetric double-substrate-mimicking inhibitor Ap5A. As NBF-2 plays a central role in CFTR channel opening and closing the results reported here are fundamental in understanding mechanisms of CFTR channel activity regulation.


Asunto(s)
Adenosina Trifosfatasas/metabolismo , Adenilato Quinasa/metabolismo , Regulador de Conductancia de Transmembrana de Fibrosis Quística/metabolismo , GTP Fosfohidrolasas/metabolismo , Péptidos/metabolismo , Adenosina Difosfato/metabolismo , Adenosina Monofosfato/metabolismo , Adenosina Trifosfatasas/antagonistas & inhibidores , Adenosina Trifosfato/metabolismo , Adenilato Quinasa/antagonistas & inhibidores , Regulador de Conductancia de Transmembrana de Fibrosis Quística/química , Regulador de Conductancia de Transmembrana de Fibrosis Quística/genética , Regulador de Conductancia de Transmembrana de Fibrosis Quística/aislamiento & purificación , Fosfatos de Dinucleósidos/farmacología , Inhibidores Enzimáticos , GTP Fosfohidrolasas/antagonistas & inhibidores , Guanosina Trifosfato/metabolismo , Péptidos/química , Péptidos/genética , Péptidos/aislamiento & purificación , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/aislamiento & purificación , Proteínas Recombinantes de Fusión/metabolismo
11.
FEBS Lett ; 398(1): 97-100, 1996 Nov 25.
Artículo en Inglés | MEDLINE | ID: mdl-8946960

RESUMEN

Association reactions of a recombinant CFTR-NBF-2 polypeptide fused to glutathione S-transferase with guanine nucleotides were monitored quantitatively by recording the fluorescence enhancement of excited trinitrophenol (TNP)-labelled GTP after binding to NBF-2. Binding of TNP-GTP to the recombinant NBF-2 polypeptide was characterized by a Kd value of 3.9 microM. The corrected Kd values for unlabelled guanine nucleotides were determined to be 33 microM for GTP, 92 microM for GDP and 217 microM for GMP. TNP-ATP bound to NBF-2 was competitively displaced by GTP indicating a common binding site for both nucleotides. The recombinant NBF-2 did not show an intrinsic GTPase activity above a detection limit of 0.007 min(-1). Our findings provide the first experimental evidence that NBF-2 can act as a GTP-binding subunit that would favor the release of GDP after GTP hydrolysis.


Asunto(s)
Regulador de Conductancia de Transmembrana de Fibrosis Quística/metabolismo , Guanosina Trifosfato/metabolismo , Fragmentos de Péptidos/metabolismo , Proteínas Recombinantes de Fusión/metabolismo , Adenosina Trifosfato/metabolismo , Sitios de Unión , Regulador de Conductancia de Transmembrana de Fibrosis Quística/genética , Citoplasma/metabolismo , Fluorescencia , GTP Fosfohidrolasas/metabolismo , Guanina/metabolismo , Guanosina Difosfato/metabolismo , Guanosina Monofosfato/metabolismo , Fragmentos de Péptidos/genética , Proteínas Recombinantes de Fusión/genética
12.
FEBS Lett ; 391(3): 297-301, 1996 Aug 12.
Artículo en Inglés | MEDLINE | ID: mdl-8764993

RESUMEN

Mono(6-succinylamido-6-deoxy)-beta-cyclodextrin was synthesized by classical carbohydrate chemistry and used as a template mono-functionalized with the linear, fully flexible 4C-spacer carboxylate for covalent linkage of the calpain inhibitor leucyl-leucyl-norleucinal. Spectroscopic analyses of the conjugate do not support a self-inclusion of part of the hydrophobic peptide tail, but confirm its intra- or intermolecular interaction with the template moiety that leads to full water solubility. The inhibitory potency of the beta-cyclodextrin/peptide aldehyde construct was compared with that of the parent Ac-Leu-Leu-Nle-H against cathepsin B and calpain. Despite the large size of the template the inhibition of cathepsin B was only slightly reduced in full agreement with the X-ray structure of this enzyme which shows full accessibility of the S-subsites. For this enzyme the 4C-spacer is apparently sufficient to guarantee optimal interaction of the peptide tail with the binding cleft. Conversely, for mu-calpain a significantly decreased inhibitory potency was obtained with the conjugate suggesting steric interference of the template in the binding process. These results show that the beneficial properties of the cyclodextrin template can be retained in conjugates with bioactive peptides if attention is paid to optimize in each case the size and nature of the spacer for optimal recognition of the grafted biomolecule.


Asunto(s)
Calpaína/antagonistas & inhibidores , Ciclodextrinas/metabolismo , Inhibidores de Cisteína Proteinasa/farmacología , Leupeptinas/farmacología , beta-Ciclodextrinas , Secuencia de Carbohidratos , Dicroismo Circular , Cinética , Datos de Secuencia Molecular
13.
Eur J Biochem ; 235(3): 534-42, 1996 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-8654398

RESUMEN

Chicken cystatin and human kininogen domain 2 are members of the cystatin superfamily of protein-type cysteine proteinase inhibitors. They show structural and functional similarities, but only human kininogen domain 2 inhibits calpain. Using recombinant chicken cystatin as a scaffold for hybrid cassette analysis, the known reactive-site regions (N-terminus, first hairpin loop and second hairpin loop) were substituted by the corresponding sequences of human kininogen domain 2 in a single and combined manner. Seven hybrids were expressed, purified to homogeneity, characterized protein-chemically, and their inhibition of papain, actinidin, human cathepsin B, human cathepsin L and calpain (80-kDa subunit of rabbit skeletal muscle calpain II and porcine erthrocyte calpain 1) was determined. Strong but temporary inhibition of calpain by chicken cystatin hybrids carrying the N-terminus alone (variant sc1-KD2) or the N-terminus together with the first hairpin loop (variant sc1/2-KD2) was observed; hybrids of the second hairpin loop (sc3-KD2, sc1/3-KD2, sc2/3-KD2, sc1/2/3-KD2) were less strong calpain inhibitors. These data indicate that the inhibiton of calpain by human kininogen domain 2 requires the correct conformation and combination of several contact sites, and suggest that the N-terminus and the first hairpin loop play a major role in this ensemble. Remarkably, hybrid sc2-KD2 exhibited 5 or 150 times stronger inhibition of actinidin compared to native chicken cystatin or to proteolytically isolated human kininogen domain 2, respectively. This indicates an important role of the first hairpin loop of cystatins in the interaction with actinidin. Along with the impaired inhibition of cathepsin L, papain, actinidin, cathepsin B and calpain by the hybrids sc1/3-KD2, sc2/3-KD2 and sc1/2/3-KD2, these results support our hypothesis that all three predicted contact regions of kininogen domain 2 contribute to binding in the active-site clefts of papain-like enzymes in a finely balanced manner.


Asunto(s)
Cistatinas/química , Endopeptidasas , Inhibidores Enzimáticos/farmacología , Quininógenos/química , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Calpaína/antagonistas & inhibidores , Catepsina B/antagonistas & inhibidores , Catepsina L , Catepsinas/antagonistas & inhibidores , Pollos , Cisteína Endopeptidasas/efectos de los fármacos , Inhibidores Enzimáticos/química , Humanos , Datos de Secuencia Molecular , Oligodesoxirribonucleótidos , Papaína/antagonistas & inhibidores , Homología de Secuencia de Aminoácido
14.
FEBS Lett ; 363(1-2): 189-94, 1995 Apr 17.
Artículo en Inglés | MEDLINE | ID: mdl-7537226

RESUMEN

CFTR-NBF-2 was expressed in Escherichia coli in fusion with glutathione-S-transferase, the soluble portion was purified and identified as a structured protein by its CD spectrum. Association reactions of the recombinant NBF-2 with adenine nucleotides were monitored qualitatively by demonstrating its ability to bind specifically to ATP-, ADP- and AMP-affinity agarose and quantitatively by recording the fluorescence enhancement of excited trinitrophenol (TNP)-labelled adenine nucleotides occurring as a result of binding to NBF-2. Best-fit monophasic binding curves to the fluorescence data indicated Kd values of 22 microM for TNP-ATP, 39 microM for TNP- ADP and 2.1 microM for TNP-AMP. The corrected Kd values for unlabelled adenine nucleotides competing with the fluorophores were determined to be 37 microM for ATP, 92 microM for ADP and 12 microM for AMP. The recombinant NBF-2 did not show any hydrolytic activity on ATP (detection limit 0.001 s-1). Our findings support the concept of a central role of NBF-2 in CFTR activity regulation acting as an allosteric switch between channel opening and closing and give the first experimental evidence that the channel inhibitor AMP could act via NBF-2.


Asunto(s)
Glutatión Transferasa/química , Proteínas de la Membrana/química , Nucleótidos/metabolismo , Proteínas Recombinantes de Fusión/química , Adenosina Difosfato/metabolismo , Adenosina Monofosfato/metabolismo , Adenosina Trifosfato/metabolismo , Secuencia de Bases , Sitios de Unión , Regulador de Conductancia de Transmembrana de Fibrosis Quística , Escherichia coli/genética , Expresión Génica , Glutatión Transferasa/genética , Glutatión Transferasa/metabolismo , Hidrólisis , Proteínas de la Membrana/genética , Proteínas de la Membrana/metabolismo , Datos de Secuencia Molecular , Pliegue de Proteína , Proteínas Recombinantes de Fusión/metabolismo , Sefarosa , Trinitrobencenos
15.
FEBS Lett ; 361(2-3): 185-90, 1995 Mar 20.
Artículo en Inglés | MEDLINE | ID: mdl-7698320

RESUMEN

Temporary inhibition of the cysteine proteinases papain and cathepsin L was observed with several hairpin loop mutants of recombinant chicken cystatin at enzyme concentrations above nanomolar. Kinetic modelling of inhibition data, gel electrophoresis and amino acid sequencing revealed that reappearance of papain activity is due to selective cleavage of the Gly(9)-Ala10 bond in the N-terminal binding area of the chicken cystatin variants, resulting in truncated inhibitors of lower affinity. Cleavage of the same bond by contaminating papaya proteinase IV was ruled out by previous purification of papain and suitable control experiments. According to the proposed kinetic model, cleavage occurs within the enzyme-inhibitor complex with first order rate constants ktemp of 2.3 x 10(-3) up to 5 x 10(-1) s-1. A similar ktemp/Km ratio was found for all mutants (0.7 x 10(6)-2.1 x 10(6) s-1.M-1); it is almost identical with the kcat/Km ratio of the peptide substrate Z-Phe-Arg-NHMec. These results suggest that distorted contacts of one of the hairpin loops affect binding of the N-terminal contact area in a way that covalent interaction of the Gly(9)-Ala10 bond with the active-site Cys residue of papain can occur and the bond is cleaved in a substrate-like manner.


Asunto(s)
Alanina , Cistatinas/química , Cistatinas/farmacología , Glicina , Papaína/antagonistas & inhibidores , Secuencia de Aminoácidos , Animales , Sitios de Unión , Pollos , Cistatinas/biosíntesis , Cinética , Modelos Teóricos , Datos de Secuencia Molecular , Mutagénesis Insercional , Papaína/aislamiento & purificación , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/farmacología , Especificidad por Sustrato
16.
FEBS Lett ; 361(2-3): 179-84, 1995 Mar 20.
Artículo en Inglés | MEDLINE | ID: mdl-7698319

RESUMEN

Five recombinant hairpin loop variants of chicken cystatin (delta V55, delta V55-S56, delta P103-L105, delta I102-Q107, loop2-KD2) were constructed by cassette mutagenesis, expressed in E. coli, purified to homogeneity, characterized by protein-chemical means and by their inhibitory properties. The variant forms, modified in two of the three postulated cysteine proteinase binding regions, were inhibitorily active. However, the equilibrium dissociation constants of the complexes between papain as well as human cathepsin B or L and the cystatin variants show a weaker affinity for all three enzymes compared with recombinant chicken cystatin. These results prove the contribution of both hairpin loops to complex formation with the three enzymes. Furthermore, the kinetic constants indicate discrete differences in the molecular mechanism of interaction between chicken cystatin and papain, cathepsin B, and cathepsin L. Inhibition of cathepsin L was much less affected than inhibition of papain or cathepsin B by the modifications achieved in the five variants. Remarkably, at high enzyme concentration (above 0.5 nM) inhibition of papain by these variants was 'temporary', that means, active papain was released from the enzyme-inhibitor complex within minutes to hours (compare [1]).


Asunto(s)
Catepsina B/antagonistas & inhibidores , Catepsinas/antagonistas & inhibidores , Cistatinas/química , Cistatinas/farmacología , Endopeptidasas , Papaína/antagonistas & inhibidores , Estructura Secundaria de Proteína , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Catepsina L , Pollos , Clonación Molecular , Cistatinas/biosíntesis , Cisteína Endopeptidasas , Variación Genética , Cinética , Datos de Secuencia Molecular , Mutagénesis Insercional , Oligodesoxirribonucleótidos , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/farmacología
17.
FEBS Lett ; 321(1): 93-7, 1993 Apr 19.
Artículo en Inglés | MEDLINE | ID: mdl-8467916

RESUMEN

The internal domain 3 of the heavy chain of human kininogen, a cysteine proteinase inhibitor, was amplified by a polymerase chain reaction from the kininogen cDNA clone phKG36. The DNA fragment was expressed in Escherichia coli using the ompA expression vector pASK40 and the resulting protein was isolated from periplasm, purified by S-carboxymethylpapain affinity- and ion-exchange chromatography. The recombinant human kininogen domain 3 is 92% pure, reacts with anti-kininogen antibodies and is actively inhibitory. The expected amino acid sequence of ANSM-[G253-S377] kininogen was confirmed; the inhibitor has a molecular mass of 14,396 Da and an isoelectric point of 6.0 (pH). The determined Ki values of the complexes with papain and cathepsin L are similar to those measured previously with proteolytically liberated kininogen domain 3, and those of single-domain cystatins, like chicken egg white cystatin. However, recombinant kininogen domain 3 is a weak inhibitor of cathepsin B (Ki = 63 nM) as it has been found for native L-kininogen (Ki = 340 nM).


Asunto(s)
Quininógenos/genética , Secuencia de Aminoácidos , Secuencia de Bases , Clonación Molecular , Inhibidores de Cisteína Proteinasa/química , Inhibidores de Cisteína Proteinasa/genética , Expresión Génica , Humanos , Datos de Secuencia Molecular , Oligodesoxirribonucleótidos/química , ARN Mensajero/genética , Proteínas Recombinantes/genética
18.
Eur J Biochem ; 209(3): 837-45, 1992 Nov 01.
Artículo en Inglés | MEDLINE | ID: mdl-1425692

RESUMEN

Using recombinant DNA methods, seven cystatin variants were produced by cassette mutagenesis of a chicken egg white cystatin variant which already contains the mutations Ala3, Glu2, Phe1, Ser1-->Met, Met29-->and Met 89-->Leu. When characterized by structural and functional studies, they were all found to harbour mutations in the first hairpin loop, the so-called 'QXVXG' region, which is highly conserved within the cystatin superfamily and thought to be important for its inhibitory activity towards cysteine proteinases. They were purified to more than 90% homogeneity and analysed by SDS/PAGE, HPLC, tryptic peptide mapping, N-terminal amino acid sequencing and ELISA. Structural model building of the variants and their complexes with papain was performed using computer graphics based on the crystallographic coordinates of chicken egg white cystatin and the papain-stefin complex. Only minor conformational changes were required for modelling the mutants or complexes. Equilibrium dissociation constants and rate constants of complex formation of the variants with papain, actinidin as well as cathepsin B and L were determined by kinetic measurements using fluorogenic substrates. The single exchanges Gln53-->Glu, Gln53-->Asn, Val44-->Asp, Gly57-->Ala and the double exchanges Arg52-->Leu, Gln53-->Glu, Gln53-->Asn, Ser56-->Ala, Leu54-->Met, Gly57-->Ala reduced the inhibition of papain, actinidin and cathespin B significantly by 10-1000-fold. With the exception of the Val55-->Asp variant, the differences in the Ki values are mainly due to larger k off values, whereas the kon values seem to be more or less unaffected by the selected mutations. The effect on the inhibition of papain is generally smaller than the effects on actinidin and cathepsin B inhibition. Cathepsin L inhibition is strikingly insensitive to all mutations. These distinct effects of the inhibitor variants indicate differences in proteinase-inhibitor-protein interactions between closely related cysteine proteinases. In addition, the results verify the prediction, made earlier from sequence alignment studies and from a docking model of the chicken cystatin-papain complex, that the first hairpin loop of cystatins is essential for effective inhibition.


Asunto(s)
Cistatinas/genética , Secuencia de Aminoácidos , Animales , Pollos , Cromatografía Líquida de Alta Presión , Clonación Molecular , Cistatinas/química , Clara de Huevo , Electroforesis en Gel de Poliacrilamida , Genes Sintéticos , Cinética , Modelos Moleculares , Datos de Secuencia Molecular , Mutagénesis Insercional , Proteínas Recombinantes/química , Proteínas Recombinantes/genética
19.
Biol Chem Hoppe Seyler ; 373(7): 433-40, 1992 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-1515071

RESUMEN

The dipeptidyl rhodamine diamide substrates (Z-Phe-Arg)2-R110 and (Z-Arg-Arg)2-R110 are 820- and 360-fold more selective for cathepsin L than for cathepsin B allowing a sensitive determination of cathepsin L activity in the presence of high activity of cathepsin B. The results obtained with cell lysates suggest that the cysteine proteinase activity of vital macrophages detected by flow cytometry with these substrates is mainly due to cathepsin L.


Asunto(s)
Catepsinas/análisis , Endopeptidasas , Rodaminas/química , Animales , Catepsina B/análisis , Catepsina L , Cumarinas/metabolismo , Cisteína Endopeptidasas , Citometría de Flujo , Colorantes Fluorescentes , Humanos , Concentración de Iones de Hidrógeno , Técnicas In Vitro , Cinética , Monocitos/enzimología , Neutrófilos/enzimología , Permeabilidad , Fagocitosis , Ratas , Ratas Endogámicas , Espectrometría de Fluorescencia , Especificidad por Sustrato
20.
Biol Chem Hoppe Seyler ; 373(7): 547-54, 1992 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-1381188

RESUMEN

The analysis of lysosomal proteases in cell lysates is complicated by pH-dependent and oxidative changes of their activity and complex formation with cytosolic inhibitors. Therefore, new flow cytometric methods were developed for the intracellular measurement of protease activities in viable cells. Intracellular cleavage of substrates such as Z-Arg-Arg-4-trifluoromethylcoumarinyl-7-amide to green fluorescent 7-amino-4-trifluoromethylcoumarin (AFC) in viable neutrophils and monocytes was only detected following phagocytosis of Escherichia coli. A measurement of the cysteine or serine proteinase activities in resting human leukocytes was, however, not possible with AFC derivatives as the overlapping blue fluorescence of the substrates reduces sensitivity. Nonfluorescent bis-substituted peptide derivatives of rhodamine 110 (R110), which are intracellularly cleaved to green fluorescent mono-substituted R110 and free R110 proved to be more sensitive substrates. The activity of the lysosomal cysteine proteinases of human monocytes or rat macrophages, i.e. cathepsin B and L, was specifically measured with (Z-Arg-Arg)2-R110, (Z-Phe-Arg)2-R110, or (Z-Ala-Arg-Arg)2-R110. Fluorescence generation was completely inhibited by Z-Phe-Ala-diazomethane or E-64. The serine proteinases of human neutrophils were analyzed with Elastase-substrates such as (Z-Ala-Ala)2-R110 or (Z-Ala-Ala-Ala)2-R110. Specificity was shown by inhibition with diisopropylfluorophosphate.


Asunto(s)
Endopeptidasas/análisis , Secuencia de Aminoácidos , Catepsina B/análisis , Catepsina L , Catepsinas/análisis , Cisteína Endopeptidasas , Eritrocitos/química , Eritrocitos/metabolismo , Escherichia coli/metabolismo , Citometría de Flujo , Humanos , Técnicas In Vitro , Lisosomas/enzimología , Datos de Secuencia Molecular , Monocitos/enzimología , Neutrófilos/enzimología , Elastasa Pancreática/análisis , Elastasa Pancreática/metabolismo , Péptidos/análisis , Péptidos/síntesis química , Fagocitosis/fisiología , Rodaminas , Espectrometría de Fluorescencia , Coloración y Etiquetado
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