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1.
Int J Mol Sci ; 24(14)2023 Jul 21.
Artículo en Inglés | MEDLINE | ID: mdl-37511479

RESUMEN

Cysteine-rich receptor-like kinases (CRKs) are a type of receptor-like kinases (RLKs) that are important for pathogen resistance, extracellular reactive oxygen species (ROS) signaling, and programmed cell death in plants. In a previous study, we identified 46 CRK family members in the Phaseolus vulgaris genome and found that CRK12 was highly upregulated under root nodule symbiotic conditions. To better understand the role of CRK12 in the Phaseolus-Rhizobia symbiotic interaction, we functionally characterized this gene by overexpressing (CRK12-OE) and silencing (CRK12-RNAi) it in a P. vulgaris hairy root system. We found that the constitutive expression of CRK12 led to an increase in root hair length and the expression of root hair regulatory genes, while silencing the gene had the opposite effect. During symbiosis, CRK12-RNAi resulted in a significant reduction in nodule numbers, while CRK12-OE roots showed a dramatic increase in rhizobial infection threads and the number of nodules. Nodule cross sections revealed that silenced nodules had very few infected cells, while CRK12-OE nodules had enlarged infected cells, whose numbers had increased compared to controls. As expected, CRK12-RNAi negatively affected nitrogen fixation, while CRK12-OE nodules fixed 1.5 times more nitrogen than controls. Expression levels of genes involved in symbiosis and ROS signaling, as well as nitrogen export genes, supported the nodule phenotypes. Moreover, nodule senescence was prolonged in CRK12-overexpressing roots. Subcellular localization assays showed that the PvCRK12 protein localized to the plasma membrane, and the spatiotemporal expression patterns of the CRK12-promoter::GUS-GFP analysis revealed a symbiosis-specific expression of CRK12 during the early stages of rhizobial infection and in the development of nodules. Our findings suggest that CRK12, a membrane RLK, is a novel regulator of Phaseolus vulgaris-Rhizobium tropici symbiosis.


Asunto(s)
Phaseolus , Rhizobium tropici , Rhizobium , Simbiosis/genética , Rhizobium tropici/genética , Rhizobium tropici/metabolismo , Phaseolus/metabolismo , Especies Reactivas de Oxígeno/metabolismo , Raíces de Plantas/genética , Raíces de Plantas/metabolismo , Rhizobium/metabolismo , Fijación del Nitrógeno/genética , Nódulos de las Raíces de las Plantas/metabolismo
2.
Genes (Basel) ; 13(11)2022 11 13.
Artículo en Inglés | MEDLINE | ID: mdl-36421782

RESUMEN

Sucrose non-fermentation-related protein kinase 1 (SnRK1) a Ser/Thr protein kinase, is known to play a crucial role in plants during biotic and abiotic stress responses by activating protein phosphorylation pathways. SnRK1 and some members of the plant-specific SnRK2 and SnRK3 sub-families have been studied in different plant species. However, a comprehensive study of the SnRK gene family in Phaseolus vulgaris is not available. Symbiotic associations of P. vulgaris with Rhizobium and/or mycorrhizae are crucial for the growth and productivity of the crop. In the present study, we identified PvSnRK genes and analysed their expression in response to the presence of the symbiont. A total of 42 PvSnRK genes were identified in P. vulgaris and annotated by comparing their sequence homology to Arabidopsis SnRK genes. Phylogenetic analysis classified the three sub-families into individual clades, and PvSnRK3 was subdivided into two groups. Chromosome localization analysis showed an uneven distribution of PvSnRK genes on 10 of the 11 chromosomes. Gene structural analysis revealed great variation in intron number in the PvSnRK3 sub-family, and motif composition is specific and highly conserved in each sub-family of PvSnRKs. Analysis of cis-acting elements suggested that PvSnRK genes respond to hormones, symbiosis and other abiotic stresses. Furthermore, expression data from databases and transcriptomic analyses revealed differential expression patterns for PvSnRK genes under symbiotic conditions. Finally, an in situ gene interaction network of the PvSnRK gene family with symbiosis-related genes showed direct and indirect interactions. Taken together, the present study contributes fundamental information for a better understanding of the role of the PvSnRK gene family not only in symbiosis but also in other biotic and abiotic interactions in P. vulgaris.


Asunto(s)
Micorrizas , Phaseolus , Proteínas Serina-Treonina Quinasas , Rhizobium , Micorrizas/fisiología , Phaseolus/genética , Phaseolus/microbiología , Filogenia , Proteínas Serina-Treonina Quinasas/genética , Rhizobium/fisiología , Simbiosis/genética
3.
Prog Transplant ; 32(2): 112-119, 2022 06.
Artículo en Inglés | MEDLINE | ID: mdl-35290131

RESUMEN

Introduction: Body fat distribution is known to contribute to a variety of pathologies. Research Questions: We aimed to assess whether this distribution is associated with clinical outcomes in renal transplant recipients (RTR) and to examine its relationship with leptin and adiponectin gene variants and plasma concentrations. Design: Bioelectrical impedance analyses were performed in 236 RTR. Leptin/adiponectin levels were measured by immunoassay and relevant polymorphisms in the leptin receptor (LEPR) and adiponectin (ADIPOQ) genes were identified. Associations were assessed by logistic regression modeling. Results: The waist-to-height ratio (WHr) displayed a significant association with delayed graft function, acute rejection and post-transplant diabetes mellitus, with OR values of 2.04 (1.02-4.08) p = 0.045; 3.08 (1.22-7.79) p = 0.017 and 2.79 (1.16-6.74) p = 0.022, respectively. Waist circumference was linked to delayed graft function [OR = 1.03 (1.01-1.05), p = 0.025] and AR [OR = 1.041 (1.01-1.07), p = 0.009]. Leptin levels were significantly higher in patients who experienced rejection [19.91 ± 23.72 versus 11.22 ± 16.42 ng/ml; OR = 1.021 (1.01-1.04), p = 0.017]. The ADIPOQ rs1501299TT genotype showed a significant association with higher WHr (0.63 ± 0.11 vs 0.59 ± 0.87 for GG/GT genotypes; p = 0.015) and WC values (102.3 ± 14.12 vs 96.38 ± 14.65 for GG/GT genotypes; p = 0.021). Conclusion: WC, and especially WHr, are associated with adverse outcomes in renal transplantation and are affected by variability in the ADIPOQ gene.


Asunto(s)
Adipoquinas , Adiponectina , Distribución de la Grasa Corporal , Trasplante de Riñón , Leptina , Adipoquinas/genética , Adipoquinas/metabolismo , Adiponectina/sangre , Adiponectina/genética , Índice de Masa Corporal , Funcionamiento Retardado del Injerto , Humanos , Trasplante de Riñón/efectos adversos , Leptina/sangre , Polimorfismo de Nucleótido Simple , Receptores de Leptina/genética , Resultado del Tratamiento
4.
Sci Rep ; 11(1): 11319, 2021 05 31.
Artículo en Inglés | MEDLINE | ID: mdl-34059696

RESUMEN

Target of rapamycin (TOR) is a conserved central growth regulator in eukaryotes that has a key role in maintaining cellular nutrient and energy status. Arbuscular mycorrhizal (AM) fungi are mutualistic symbionts that assist the plant in increasing nutrient absorption from the rhizosphere. However, the role of legume TOR in AM fungal symbiosis development has not been investigated. In this study, we examined the function of legume TOR in the development and formation of AM fungal symbiosis. RNA-interference-mediated knockdown of TOR transcripts in common bean (Phaseolus vulgaris) hairy roots notably suppressed AM fungus-induced lateral root formation by altering the expression of root meristem regulatory genes, i.e., UPB1, RGFs, and sulfur assimilation and S-phase genes. Mycorrhized PvTOR-knockdown roots had significantly more extraradical hyphae and hyphopodia than the control (empty vector) roots. Strong promoter activity of PvTOR was observed at the site of hyphal penetration and colonization. Colonization along the root length was affected in mycorrhized PvTOR-knockdown roots and the arbuscules were stunted. Furthermore, the expression of genes induced by AM symbiosis such as SWEET1, VPY, VAMP713, and STR was repressed under mycorrhized conditions in PvTOR-knockdown roots. Based on these observations, we conclude that PvTOR is a key player in regulating arbuscule development during AM symbiosis in P. vulgaris. These results provide insight into legume TOR as a potential regulatory factor influencing the symbiotic associations of P. vulgaris and other legumes.


Asunto(s)
Micorrizas/crecimiento & desarrollo , Phaseolus/enzimología , Phaseolus/microbiología , Serina-Treonina Quinasas TOR/metabolismo , Regulación de la Expresión Génica de las Plantas , Hifa/crecimiento & desarrollo , Especificidad de Órganos , Plantas Modificadas Genéticamente , Simbiosis
5.
Asia Pac J Clin Oncol ; 15(6): 371-376, 2019 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-31321885

RESUMEN

AIM: Intensity-modulated radiotherapy (IMRT) has demonstrated improved local control in extremity soft tissue sarcoma (STS) after limb-sparing surgery compared with three-dimensional conformal radiation therapy. Our purpose was to evaluate sliding-window IMRT (SW-IMRT) and volumetric arc therapy (VMAT) in planning target volume (PTV) coverage and dose to organs-at-risk (OAR). METHODS: Sixteen patients undergoing postoperative RT for lower extremity STS were included. For each patient, one VMAT plan and one SW-IMRT plan were proposed. Both were evaluated using cumulative dose-volume histogram data for OAR and PTVs. Prescribed dose was 66 Gy (2 Gy/fraction) to PTV1 and 56 Gy (1.69 Gy/fraction) to PTV2. OARs contoured were femur, neurovascular bundle, minimum tissue corridor, normal tissue outside PTV2, joint and genitalia. T-Student test was performed. RESULTS: Eleven male (69%) and five female patients (31%) were analyzed. Mean age was 60 years. Both techniques showed optimal target coverage, conformity index (CI) and homogeneity index (HI). VMAT PTV2 CI was 1.13 (mean) ± 0.08 (standard deviation) versus 1.19 ± 0.10 SW-IMRT PTV2 CI (P < 0.05). VMAT PTV1 HI was 0.09 ± 0.01 versus 0.08 ± 0.01 SW-IMRT PTV1 HI (P < 0.05). Regarding OARs, VMAT delivered lower dose to femur, genitalia, normal tissue outside PTV2 and joints. SW-IMRT spared tissue corridor mean dose (10.4 Gy ± 6.8 Gy) versus (14.7 ± 6.5 Gy) VMAT (P < 0.05). CONCLUSIONS: Both techniques achieved great conformity, homogeneity and coverage of PTV. VMAT produced lower dose to OARS and SW-IMRT was superior in sparing dose to normal-tissue-corridor, which could reduce risk of lymphedema.


Asunto(s)
Planificación de la Radioterapia Asistida por Computador/métodos , Radioterapia de Intensidad Modulada/métodos , Sarcoma/radioterapia , Neoplasias de los Tejidos Blandos/radioterapia , Adulto , Anciano , Terapia Combinada , Femenino , Humanos , Recuperación del Miembro/métodos , Masculino , Persona de Mediana Edad , Dosificación Radioterapéutica , Radioterapia Adyuvante/métodos , Sarcoma/cirugía , Neoplasias de los Tejidos Blandos/cirugía , Muslo
6.
Rev. cienc. med. Pinar Rio ; 22(6): 6-18, nov.-dic. 2018.
Artículo en Español | LILACS | ID: biblio-985402

RESUMEN

RESUMEN Introducción: Objetivo: Métodos: Resultados: Conclusiones:


ABSTRACT Introduction: the characterization of early language development is essential to respond to the process of evaluation and intervention in children with intellectual disability. The county of Pinegrove of the River occupies the fourth national place of cases of intellectual discapacidad. Objective: to analyze the relevance of the characterization of language development in children with intellectual disability and the contribution of the basic notions of Mathematics. Methods: a pedagogical study where theoretical, empirical and statistical methods were applied to compile, interpret and process the information related to the subject. Scientific observation was used during the application of logopedic exploration to 35 children with intellectual disability from 2014 to 2017. Results: the approach to perform the characterization of language development was created, along with the analysis of the need to work with the basic notions of Mathematics from the management of a set of scientific observations during the application of logopedic exploration. It results in a resource to support the early diagnosis and its quality with a multidisciplinary and intersectorial nature, involving the health and the educational areas. Conclusions: the logopedic exploration allows the characterization of language development of children with intellectual disability; it is a requirement to achieve the improvement in the processes of characterization and intervention in order to develop the communication. The implication of the basic notions of Mathematics demands the renovation of the educational process with a multidisciplinary and intersectorial approach that projects the actions to support the development of social inclusion.

7.
PLoS One ; 12(8): e0182328, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-28771548

RESUMEN

Legumes participate in two important endosymbiotic associations, with phosphorus-acquiring arbuscular mycorrhiza (AM, soil fungi) and with nitrogen-fixing bacterial rhizobia. These divergent symbionts share a common symbiotic signal transduction pathway that facilitates the establishment of mycorrhization and nodulation in legumes. However, the unique and shared downstream genes essential for AM and nodule development have not been identified in crop legumes. Here, we used ion torrent next-generation sequencing to perform comparative transcriptomics of common bean (Phaseolus vulgaris) roots colonized by AM or rhizobia. We analyzed global gene expression profiles to identify unique and shared differentially expressed genes (DEGs) that regulate these two symbiotic interactions, and quantitatively compared DEG profiles. We identified 3,219 (1,959 upregulated and 1,260 downregulated) and 2,645 (1,247 upregulated and 1,398 downregulated) unigenes that were differentially expressed in response to mycorrhizal or rhizobial colonization, respectively, compared with uninoculated roots. We obtained quantitative expression profiles of unique and shared genes involved in processes related to defense, cell wall structure, N metabolism, and P metabolism in mycorrhized and nodulated roots. KEGG pathway analysis indicated that most genes involved in jasmonic acid and salicylic acid signaling, N metabolism, and inositol phosphate metabolism are variably expressed during symbiotic interactions. These combined data provide valuable information on symbiotic gene signaling networks that respond to mycorrhizal and rhizobial colonization, and serve as a guide for future genetic strategies to enhance P uptake and N-fixing capacity to increase the net yield of this valuable grain legume.


Asunto(s)
Regulación de la Expresión Génica de las Plantas/genética , Micorrizas/genética , Micorrizas/metabolismo , Nitrógeno/metabolismo , Phaseolus/genética , Phaseolus/metabolismo , Fósforo/metabolismo , Pared Celular/química , Pared Celular/metabolismo , Ciclopentanos/metabolismo , Hongos/fisiología , Perfilación de la Expresión Génica , Oxilipinas/metabolismo , Phaseolus/crecimiento & desarrollo , Phaseolus/microbiología , Raíces de Plantas/crecimiento & desarrollo , Raíces de Plantas/metabolismo , Raíces de Plantas/microbiología , ARN Mensajero/metabolismo , Rhizobium/fisiología , Ácido Salicílico/metabolismo , Transducción de Señal , Simbiosis
8.
Plant Physiol ; 172(3): 2002-2020, 2016 11.
Artículo en Inglés | MEDLINE | ID: mdl-27698253

RESUMEN

The target of rapamycin (TOR) protein kinase regulates metabolism, growth, and life span in yeast, animals, and plants in coordination with nutrient status and environmental conditions. The nutrient-dependent nature of TOR functionality makes this kinase a putative regulator of symbiotic associations involving nutrient acquisition. However, TOR's role in these processes remains to be understood. Here, we uncovered the role of TOR during the bean (Phaseolus vulgaris)-Rhizobium tropici (Rhizobium) symbiotic interaction. TOR was expressed in all tested bean tissues, with higher transcript levels in the root meristems and senesced nodules. We showed TOR promoter expression along the progressing infection thread and in the infected cells of mature nodules. Posttranscriptional gene silencing of TOR using RNA interference (RNAi) showed that this gene is involved in lateral root elongation and root cell organization and also alters the density, size, and number of root hairs. The suppression of TOR transcripts also affected infection thread progression and associated cortical cell divisions, resulting in a drastic reduction of nodule numbers. TOR-RNAi resulted in reduced reactive oxygen species accumulation and altered CyclinD1 and CyclinD3 expression, which are crucial factors for infection thread progression and nodule organogenesis. Enhanced expression of TOR-regulated ATG genes in TOR-RNAi roots suggested that TOR plays a role in the recognition of Rhizobium as a symbiont. Together, these data suggest that TOR plays a vital role in the establishment of root nodule symbiosis in the common bean.


Asunto(s)
Phaseolus/enzimología , Phaseolus/microbiología , Proteínas de Plantas/metabolismo , Rhizobium/fisiología , Nódulos de las Raíces de las Plantas/microbiología , Simbiosis/genética , Serina-Treonina Quinasas TOR/metabolismo , Secuencia de Aminoácidos , Autofagia/genética , Pared Celular/genética , Regulación hacia Abajo/genética , Perfilación de la Expresión Génica , Regulación de la Expresión Génica de las Plantas , Genes de Plantas , Fagosomas/metabolismo , Fagosomas/ultraestructura , Phaseolus/genética , Phaseolus/ultraestructura , Fenotipo , Filogenia , Proteínas de Plantas/química , Nodulación de la Raíz de la Planta/genética , Plantas Modificadas Genéticamente , Regiones Promotoras Genéticas/genética , Interferencia de ARN , Especies Reactivas de Oxígeno/metabolismo , Nódulos de las Raíces de las Plantas/genética , Nódulos de las Raíces de las Plantas/ultraestructura , Análisis de Secuencia de ADN , Serina-Treonina Quinasas TOR/química , Regulación hacia Arriba/genética
9.
J Mass Spectrom ; 51(11): 1036-1042, 2016 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-27477240

RESUMEN

Current procedures for the evaluation of spectral accuracy of mass spectrometers are limited by the lack of certified isotopic reference materials and the high uncertainty in the isotopic composition of natural abundance molecules. The calculated uncertainties in the ratio M + 1/M for natural abundance molecules containing any number of C, H, N and/or O atoms are close to 5% relative because of the natural variability of the isotopic composition of carbon. So, we have developed two alternative measurement procedures with much lower theoretical uncertainties for a better evaluation of spectral accuracy in both single and triple quadrupole analysers. The first method is based on the measurement of the M + 2/M, M + 4/M + 2, etc. ratios for halogenated organic compounds containing either Cl or Br. The theoretical uncertainties for these ratios because of natural variability are in the order of 0.3 to 1.0% making them suitable for the evaluation of spectral accuracy with the additional advantage that there is no need to take into account other limitations such as cluster purity or poor mass resolution. This procedure was applied to the evaluation of a single quadrupole GC-MS instruments using natural abundance PCB and PBDE standards with satisfactory results. The second method can be applied to tandem instruments and takes advantage of the loss of two halogen atoms when PCB and PBDE standards are fragmented by Collision Induced Dissociation. Theoretical SRM transition ratios can be calculated as a pure combinatorial probability with theoretical uncertainties lower than 0.1%. By combining PCBs and PBDEs with different number of halogen atoms, a mass range from 100 to 700 u and abundance ratios from 0.1 to 10 can be evaluated. The use of penta-chlorinated PCBs and/or penta-brominated PBDEs is finally recommended for the evaluation of spectral accuracy of mass spectrometers with the EI source. Copyright © 2016 John Wiley & Sons, Ltd.

10.
BMC Biotechnol ; 16(1): 53, 2016 06 24.
Artículo en Inglés | MEDLINE | ID: mdl-27342637

RESUMEN

BACKGROUND: Phaseolus vulgaris is one of the most extensively studied model legumes in the world. The P. vulgaris genome sequence is available; therefore, the need for an efficient and rapid transformation system is more imperative than ever. The functional characterization of P. vulgaris genes is impeded chiefly due to the non-amenable nature of Phaseolus sp. to stable genetic transformation. Transient transformation systems are convenient and versatile alternatives for rapid gene functional characterization studies. Hence, the present work focuses on standardizing methodologies for protoplast isolation from multiple tissues and transient transformation protocols for rapid gene expression analysis in the recalcitrant grain legume P. vulgaris. RESULTS: Herein, we provide methodologies for the high-throughput isolation of leaf mesophyll-, flower petal-, hypocotyl-, root- and nodule-derived protoplasts from P. vulgaris. The highly efficient polyethylene glycol-mannitol magnesium (PEG-MMG)-mediated transformation of leaf mesophyll protoplasts was optimized using a GUS reporter gene. We used the P. vulgaris SNF1-related protein kinase 1 (PvSnRK1) gene as proof of concept to demonstrate rapid gene functional analysis. An RT-qPCR analysis of protoplasts that had been transformed with PvSnRK1-RNAi and PvSnRK1-OE vectors showed the significant downregulation and ectopic constitutive expression (overexpression), respectively, of the PvSnRK1 transcript. We also demonstrated an improved transient transformation approach, sonication-assisted Agrobacterium-mediated transformation (SAAT), for the leaf disc infiltration of P. vulgaris. Interestingly, this method resulted in a 90 % transformation efficiency and transformed 60-85 % of the cells in a given area of the leaf surface. The constitutive expression of YFP further confirmed the amenability of the system to gene functional characterization studies. CONCLUSIONS: We present simple and efficient methodologies for protoplast isolation from multiple P. vulgaris tissues. We also provide a high-efficiency and amenable method for leaf mesophyll transformation for rapid gene functional characterization studies. Furthermore, a modified SAAT leaf disc infiltration approach aids in validating genes and their functions. Together, these methods help to rapidly unravel novel gene functions and are promising tools for P. vulgaris research.


Asunto(s)
Agrobacterium/genética , Perfilación de la Expresión Génica/métodos , Phaseolus/genética , Hojas de la Planta/genética , Plantas Modificadas Genéticamente/genética , Protoplastos/fisiología , Células del Mesófilo/fisiología , Phaseolus/microbiología , Plantas Modificadas Genéticamente/microbiología , Protoplastos/citología , Transformación Bacteriana/genética
11.
J Chromatogr A ; 1429: 230-7, 2016 Jan 15.
Artículo en Inglés | MEDLINE | ID: mdl-26739916

RESUMEN

This work describes the synthesis, characterization and application of three (81)Br-labeled diastereosiomers of hexabromocyclododecane (HBCD) for the accurate and precise determination of α-, ß- and γ-HBCD in water samples by isotope dilution mass spectrometry. The synthesis of the labeled analogs was carried out by bromination of cis, trans, trans-1,5,9-cyclododecatriene with (81)Br-enriched bromine. After isolation and purification by semipreparative HPLC, each diastereoisomer was characterized in terms of concentration and isotopic enrichment. Then, they were added to the samples to simultaneously quantify the three HBCD diastereoisomers in a single LC-MS/MS injection without resorting to a methodological calibration graph. The results obtained here demonstrate that the use of (81)Br-labeled analogs provides accurate and precise determinations of α-, ß- and γ-HBCD in real water samples. The limits of quantification obtained in real samples for α-, ß- and γ-HBCD were 0.022, 0.073 and 0.015 ng L(-1), respectively, significantly lower than those required by the European Directive 2013/39/EC.


Asunto(s)
Técnicas de Química Analítica/métodos , Hidrocarburos Bromados/química , Espectrometría de Masas en Tándem , Calibración , Cromatografía Líquida de Alta Presión , Halogenación , Hidrocarburos Bromados/análisis
12.
Anal Chem ; 87(15): 7840-7, 2015 Aug 04.
Artículo en Inglés | MEDLINE | ID: mdl-26165349

RESUMEN

This work describes the first application of (37)Cl-labeled compounds to isotope dilution mass spectrometry (IDMS). The synthesis of 12 (37)Cl-labeled polychlorinated biphenyls (PCBs) was carried out by the chlorination of biphenyl with isotopically enriched chlorine gas, generated by the direct oxidation of Na(37)Cl with potassium peroxymonosulfate. After an exhaustive purification due to the presence of other congeners, the concentration and the isotopic enrichment of all (37)Cl-labeled PCBs in the mixture was determined. The proposed procedure allows the simultaneous quantification of every isotope diluted PCB congener in a single gas chromatography-tandem mass spectrometry (GC-MS/MS) injection without resorting to a methodological calibration graph. The results obtained here demonstrate that the use of (37)Cl-labeled analogues provides results in agreement with the certified values of three different Certified Reference Materials (marine sediment SRM 1944, fish tissue 1947, and loamy soil CRM 962-50) and analytical figures of merit comparable to those obtained using regular IDMS procedures based on the use of commercially available (13)C-labeled analogues.

13.
J Integr Plant Biol ; 56(3): 281-98, 2014 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-24387000

RESUMEN

Nitrogen-limited conditions are considered to be a prerequisite for legume-rhizobial symbiosis, but the effects of nitrate-rich conditions on symbiotic status remain poorly understood. We addressed this issue by examining rhizobial (Rhizobim tropici) and arbusclar mycorrhizal (Glomus intraradices) symbiosis in Phaseolus vulgaris L. cv. Negro Jamapa under nitrate pre-incubation and continuous nitrate conditions. Our results indicate that nitrate pre-incubation, independent of the concentration, did not affect nodule development. However, the continuous supply of nitrate at high concentrations impaired nodule maturation and nodule numbers. Low nitrate conditions, in addition to positively regulating nodule number, biomass, and nitrogenase activity, also extended the span of nitrogen-fixing activity. By contrast, for arbuscular mycorrhizae, continuous 10 and 50 mmol/L nitrate increased the percent root length colonization, concomitantly reduced arbuscule size, and enhanced ammonia transport without affecting phosphate transport. Therefore, in this manuscript, we have proposed the importance of nitrate as a positive regulator in promoting both rhizobial and mycorrhizal symbiosis in the common bean.


Asunto(s)
Micorrizas/fisiología , Nitratos/farmacología , Phaseolus/microbiología , Phaseolus/fisiología , Rhizobium/fisiología , Simbiosis/efectos de los fármacos , Compuestos de Amonio/metabolismo , Biomasa , Tamaño de la Célula/efectos de los fármacos , Recuento de Colonia Microbiana , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Proteínas de la Membrana/genética , Proteínas de la Membrana/metabolismo , Proteínas de Transporte de Membrana/genética , Proteínas de Transporte de Membrana/metabolismo , Micorrizas/efectos de los fármacos , Fijación del Nitrógeno/efectos de los fármacos , Fijación del Nitrógeno/genética , Nitrogenasa/metabolismo , Phaseolus/efectos de los fármacos , Phaseolus/genética , Fenotipo , Fósforo/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Brotes de la Planta/efectos de los fármacos , Brotes de la Planta/crecimiento & desarrollo , Rhizobium/efectos de los fármacos , Rhizobium/crecimiento & desarrollo , Nódulos de las Raíces de las Plantas/efectos de los fármacos , Nódulos de las Raíces de las Plantas/fisiología , Simbiosis/genética
14.
J Exp Bot ; 59(6): 1279-94, 2008.
Artículo en Inglés | MEDLINE | ID: mdl-18407964

RESUMEN

A cDNA clone, designated as PvNAS2, encoding asparagine amidotransferase (asparagine synthetase) was isolated from nodule tissue of common bean (Phaseolus vulgaris cv. Negro Jamapa). Southern blot analysis indicated that asparagine synthetase in bean is encoded by a small gene family. Northern analysis of RNAs from various plant organs demonstrated that PvNAS2 is highly expressed in roots, followed by nodules in which it is mainly induced during the early days of nitrogen fixation. Investigations with the PvNAS2 promoter gusA fusion revealed that the expression of PvNAS2 in roots is confined to vascular bundles and meristematic tissues, while in root nodules its expression is solely localized to vascular traces and outer cortical cells encompassing the central nitrogen-fixing zone, but never detected in either infected or non-infected cells located in the central region of the nodule. PvNAS2 is down-regulated when carbon availability is reduced in nodules, and the addition of sugars to the plants, mainly glucose, boosted its induction, leading to the increased asparagine production. In contrast to PvNAS2 expression and the concomitant asparagine synthesis, glucose supplement resulted in the reduction of ureide content in nodules. Studies with glucose analogues as well as hexokinase inhibitors suggested a role for hexokinase in the sugar-sensing mechanism that regulates PvNAS2 expression in roots. In light of the above results, it is proposed that, in bean, low carbon availability in nodules prompts the down-regulation of the asparagine synthetase enzyme and concomitantly asparagine production. Thereby a favourable environment is created for the efficient transfer of the amido group of glutamine for the synthesis of purines, and then ureide generation.


Asunto(s)
Aspartatoamoníaco Ligasa/genética , Regulación Enzimológica de la Expresión Génica , Regulación de la Expresión Génica de las Plantas , Phaseolus/enzimología , Transducción de Señal , Regiones no Traducidas 3'/metabolismo , Secuencia de Aminoácidos , Asparagina/metabolismo , Aspartatoamoníaco Ligasa/química , Secuencia de Bases , Metabolismo de los Hidratos de Carbono , Clonación Molecular , Glucosa/metabolismo , Hexoquinasa/metabolismo , Datos de Secuencia Molecular , Fijación del Nitrógeno , Phaseolus/genética , Phaseolus/fisiología , Raíces de Plantas/enzimología , Raíces de Plantas/genética , Raíces de Plantas/fisiología , Estructuras de las Plantas/enzimología , Estructuras de las Plantas/genética , Estructuras de las Plantas/fisiología , Regiones Promotoras Genéticas , Procesamiento Postranscripcional del ARN , ARN de Planta/química , ARN de Planta/genética , ARN de Planta/metabolismo , Nódulos de las Raíces de las Plantas/enzimología , Nódulos de las Raíces de las Plantas/genética , Nódulos de las Raíces de las Plantas/fisiología , Alineación de Secuencia
15.
Plant Cell Environ ; 31(4): 454-72, 2008 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-18182018

RESUMEN

NADH-dependent glutamate synthase (NADH-GOGAT) is a key enzyme in primary ammonia assimilation in Phaseolus vulgaris nodules. Two different types of cDNA clones of PvNADH-GOGAT were isolated from the nodule cDNA libraries. The full-length cDNA clones of PvNADH-GOGAT-I (7.4 kb) and PvNADH-GOGAT-II (7.0 kb), which displayed an 83% homology between them, were isolated using cDNA library screening, 'cDNA library walking' and RT-PCR amplification. Southern analysis employing specific 5' cDNA probes derived from PvNADH-GOGAT-I and PvNADH-GOGAT-II indicated the existence of a single copy of each gene in the bean genome. Both these proteins contain approximately 100 amino acid sequences theoretically addressing each isoenzyme to different subcellular compartments. RT-PCR analysis indicated that PvNADH-GOGAT-II expression is higher than PvNADH-GOGAT-I during nodule development. Expression analysis by RT-PCR also revealed that both of these genes are differentially regulated by sucrose. On the other hand, the expression of PvNADH-GOGAT-I, but not PvNADH-GOGAT-II, was inhibited with nitrogen compounds. In situ hybridization and promoter expression analyses demonstrated that the NADH-GOGAT-I and -II genes are differentially expressed in bean root and nodule tissues. In silico analyses of the NADH-GOGAT promoters revealed the presence of potential cis elements in them that could mediate differential tissue-specific, and sugar and amino acid responsive expression of these genes.


Asunto(s)
ADN Complementario/genética , Regulación de la Expresión Génica de las Plantas , Glutamato-Sintasa (NADH)/genética , Phaseolus/enzimología , Phaseolus/genética , Nódulos de las Raíces de las Plantas/enzimología , Nódulos de las Raíces de las Plantas/genética , Secuencia de Aminoácidos , Carbono/metabolismo , Carbono/farmacología , Clonación Molecular , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Glutamato-Sintasa (NADH)/química , Datos de Secuencia Molecular , Nitrógeno/metabolismo , Nitrógeno/farmacología , Regiones Promotoras Genéticas/genética , ARN de Planta/genética , ARN de Planta/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Nódulos de las Raíces de las Plantas/citología
16.
Mol Plant Microbe Interact ; 15(7): 728-33, 2002 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-12118889

RESUMEN

The aim of this study was to evaluate the biochemical events in root nodules which lead to increased yield when bean is inoculated with a Rhizobium etli mutant (CFN037) having increased respiratory capacity. CFN037-inoculated plants had 22% more nitrogen (N) than did wild-type (CE3)-inoculated plants. Root nodule enzymes involved in nodule carbon and nitrogen assimilation as well as in ureides and amides synthesis were assessed in plants inoculated with CFN037 and the CE3. Our results show that the xylem ureides content was lower while that of amino acids was higher in CFN037- compared with CE3-inoculated plants. Supporting these results, enzymes involved in ureide synthesis were reduced while activity of aspartate aminotransferase, glutamate synthase, sucrose synthase, and glucose-6-P dehydrogenase were increased in CFN037-induced nodules. Glutamate synthase and phosphoenolpyruvate carboxylase transcripts were detected early in the development of nodules induced by CFN037 compared with CE3. However, plants inoculated with strain CE3-vhb, which express the Vitreoscilla sp. hemoglobin and also displays increased respiratory capacity, did not have altered ureide transport in N2-fixing plants. The data suggest that inoculation with special selected mutant strains of R. etli can modulate nodule N assimilation and N transport compounds.


Asunto(s)
Carbono/metabolismo , Mutación , Nitrógeno/metabolismo , Phaseolus/metabolismo , Rhizobium/fisiología , Aminoácidos/metabolismo , Amoníaco/metabolismo , Secuencia de Bases , Cartilla de ADN , Fijación del Nitrógeno , Phaseolus/enzimología , Rhizobium/genética
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