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Int J Syst Evol Microbiol ; 69(7): 2023-2027, 2019 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-31066656

RESUMEN

A Gram-stain-negative, rod-shaped strain isolated from pig-production environments was identified as a new species within the genus Yersinia using multifaceted genomic and biochemical approaches. The genome of this strain was closed using a hybrid assembly approach combining both high accuracy short read sequencing data with long read sequencing technology. Phylogenetic analysis of the 16S rRNA gene showed ~98 % similarity to Yersinia kristensenii and ~98 % similarity to Yersinia enterocolitica. Average nucleotide identity (OrthoANI) values were calculated as 85.79 % to Y. kristensenii ATCC 33638T and 85.73 % to Y. enterocolitica ATCC 9610T thereby providing evidence that this isolate should be considered as a novel species. The type strain is CFS1934T (=NCTC 14222T=LMG 31076T).


Asunto(s)
Filogenia , Porcinos/microbiología , Yersinia/clasificación , Animales , Técnicas de Tipificación Bacteriana , Composición de Base , ADN Bacteriano/genética , Irlanda , Tonsila Palatina/microbiología , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN , Yersinia/aislamiento & purificación
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