Chryseobacterium candidae sp. nov., isolated from a yeast (Candida tropicalis).

A Gram-stain-negative, rod shaped, non-motile, aerobic bacterium (strain JC507T) was isolated from a yeast (Candida tropicalis JY101). Strain JC507T was oxidase- and catalase-positive. Complete 16S rRNA gene sequence comparison data indicated that strain JC507T was a member of the genus Chryseobacterium and was closely related to Chryseobacterium indologenes NBRC 14944T (98.7 %), followed by Chryseobacterium arthrosphaerae CC-VM-7T (98.6 %), Chryseobacterium gleum ATCC 35910T (98.5 %) and less than 98.5 % to other species of the genus Chryseobacterium.The genomic DNA G+C content of strain JC507T was 36.0 mol%. Strain JC507T had phosphatidylethanolamine, four unidentified amino lipids and four unidentified lipids. MK-6 was the only respiratory quinone. The major fatty acids (>10 %) were anteiso-C11 : 0, iso-C15 : 0 and iso-C17 : 03OH. The average nucleotide identity and in silico DNA-DNA hybridization values between strain JC507T and C. indologenes NBRC 14944T, C. arthrosphaerae CC-VM-7T and C. gleum ATCC 35910T were 80.2, 83.0 and 87.0 % and 24, 26.7 and 32.7 %, respectively. The results of phenotypic, phylogenetic and chemotaxonomic analyses support the inclusion of strain JC507T as a representative of a new species of the genus Chryseobacterium, for which the name Chryseobacteriumcandidae sp. nov. is proposed. The type strain is JC507T (=KCTC 52928T=MCC 4072T=NBRC 113872T).

Chitosan - Whey protein as efficient delivery system for squalene: Characterization and functional food application.

Squalene, a triterpenoid compound possessing excellent bioactivities, is not being utilized as a functional food ingredient due to its high susceptibility to oxidation. In the present study, the feasibility of chitosan-whey protein as an efficient wall material for squalene encapsulation using spray drying technique was attempted for functional food applications. The encapsulation efficiency of the squalene powder was found to be 75.4 ±â€¯0.22% whereas other physico-chemical properties such as moisture content, flowability, solubility, peroxide value, etc. have shown satisfactory results. The thermogravimetric analysis showed that chitosan-whey protein was able to retain the thermal stability of squalene up to a temperature of 422 °C. Furthermore, the functional food application of the encapsulated squalene in a bakery product (cake) exhibited significantly (p < 0.05) better properties in terms of oxidative stability, sensory attributes than that of cake with pure squalene and control treatment. Hence, it can be concluded that emulsification of squalene in chitosan-whey protein and its subsequent encapsulation by spray drying can be a potential process to produce oxidatively stable encapsulates for the development of functional foods.

Evaluation of chitosan as a wall material for microencapsulation of squalene by spray drying: Characterization and oxidative stability studies.

The present study was aimed at investigating the efficacy of chitosan as a wall material for microencapsulation of squalene by spray drying for functional food applications. Based on different core to wall material ratio (1:1, 0.5:1 and 0.3:1 on w/w basis), emulsions were prepared and evaluated in terms of emulsion stability, particle size, zeta potential, polydispersity Index (PDI), rheology and microstructure. The optimized emulsion combination was spray dried and characterized, physically and chemically. The encapsulation efficiency of the powder was found to be 26±0.6% whereas other properties such as particle size, zeta potential, water activity, hygroscopicity, Carr Index, Hausner ratio have shown satisfactory results. SEM analysis showed that the squalene microcapsules were smooth spherical particles free from dents and fissures. FTIR data further confirmed the encapsulation of squalene with chitosan. However, TGA, oxidative stability and accelerated Rancimat results showed that chitosan was not able to protect squalene from oxidation during storage. The results suggest that chitosan is not an appropriate wall material for microencapsulation of squalene and hence a combination of wall materials could be attempted for the encapsulation of squalene.

Molecular based phylogenetic species recognition in the genus Pampus (Perciformes: Stromateidae) reveals hidden diversity in the Indian Ocean.

Pomfrets (Genus Pampus) are commercially important fishes in the Indo Pacific region. The systematics of this genus is complicated due to morphological similarities between species. The silver pomfret from Indian waters has long been considered to be Pampus argenteus. The objective of the study was to utilize the mitochondrial COI gene to establish the molecular identity of the silver pomfret distributed in Indian waters and to resolve the phylogenetic relationships among Pampus species in the world based on sequence data in the NCBI database. Seven valid Pampus species are identified in this study. The mean genetic divergence value calculated between clades representing these species was 7.9%. The mean genetic distance between the so-called Pampus argenteus from Indian waters and sequences attributed to P. argenteus from the South China Sea, where the neotype of this species was collected, was found to be greater than 12%, strongly supporting the likelihood of the Indian species being distinct. The Indian Pampus species show very close affinity to P. cinereus, with inter species differences less than 2%. The taxonomic identity of the silver pomfret in India is also discussed here, in light of molecular and morphological evidence.

Terminology for Blastocystis subtypes--a consensus.

Blastocystis is a ubiquitous enteric protistan parasite that has extensive genetic diversity and infects humans and many other animals. Distinct molecular methodologies developed to detect variation and obtain information about transmission patterns and clinical importance have resulted in a confusing array of terminologies for the identification and designation of Blastocystis subtypes. In this article, we propose a standardization of Blastocystis terminology to improve communication and correlate research results. Based primarily on published small-subunit ribosomal RNA gene analyses, we propose that all mammalian and avian isolates should be designated Blastocystis sp. and assigned to one of nine subtypes.

Kinetics of soil ozonation: an experimental and numerical investigation.

This study investigates the use of ozone for soil remediation. Batch experiments, in which ozone-containing gas was continuously recycled through a soil bed, were conducted to quantify the rate of ozone self-decomposition and the rates of ozone interaction with soil organic and inorganic matter. Column experiments were conducted to measure ozone breakthrough from a soil column. Parameters such as ozone flow rate, soil mass, and ozonation time were varied in these experiments. After ozone concentration had reached steady state, the total organic carbon concentration was measured for all soil samples. The ozonation efficiency, represented by the ratio of soil organic matter consumed to the total ozone input, was quantified for each experiment. Numerical simulations were conducted to simulate experimentally obtained column breakthrough curves. Experimentally obtained kinetic rate constants were used in these simulations, and the results were in good agreement with experimental data. In contrast to previous studies in which soil inorganic matter was completely ignored, our experiments indicate that soil inorganic matter may also promote depletion of ozone, thus reducing the overall ozonation efficiency. Three-dimensional numerical simulations were conducted to predict the efficacy of ozonation for soil remediation in the field. These simulations indicate that such ozonation can be very effective, provided that effective circulation of ozone is achieved through appropriately placed wells.