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1.
Heliyon ; 10(13): e33324, 2024 Jul 15.
Artículo en Inglés | MEDLINE | ID: mdl-39071721

RESUMEN

Small pelagic fishes including anchovies in Indonesia are caught by using different types of fishing gears. However, the anchovy purse seine commonly used polyethylene (PE) as material webbing which is less effective in the North Coastal Java Sea. This study aims to describe the design and construction of the anchovy purse seine and the characteristics of this gear construction. The research was carried out in the North Coastal Java Sea of Indonesia between May and June 2021. The main data from the nine anchovy purse seine units were collected using purposive sampling. The sampling method was performed by identifying and measuring the components of the number of anchovy purse seiners. The ratio of the length of the head rope to the length of the ground rope is between 0.926 and 0.991, so the net is not exactly rectangular, but almost trapezium in shape. The anchovy purse seine was constructed using webbing polyamide (PA) with 8 mm-9 mm in mesh size, which is considered a small mesh size. It is assembled with some ropes, floats, and sinkers. The anchovy purse seine is characterized by the dominant buoyancy value, 48 % larger than the sinking force. The sinking speed is 0.15 m/s, and the sinking time is 164 s. The anchovy purse seine's design and construction are suitable for operating in the waters of North Coast of Java.

2.
Environ Microbiol ; 24(3): 1308-1325, 2022 03.
Artículo en Inglés | MEDLINE | ID: mdl-34708512

RESUMEN

Terpios hoshinota is an aggressive, space-competing sponge that kills various stony corals. Outbreaks of this species have led to intense damage to coral reefs in many locations. Here, the first large-scale 16S rRNA gene survey across three oceans revealed that bacteria related to the taxa Prochloron, Endozoicomonas, SAR116, Ruegeria, and unclassified Proteobacteria were prevalent in T. hoshinota. A Prochloron-related bacterium was the most dominant and prevalent cyanobacterium in T. hoshinota. The complete genome of this uncultivated cyanobacterium and pigment analysis demonstrated that it has phycobiliproteins and lacks chlorophyll b, which is inconsistent with the definition of Prochloron. Furthermore, the cyanobacterium was phylogenetically distinct from Prochloron, strongly suggesting that it should be a sister taxon to Prochloron. Therefore, we proposed this symbiotic cyanobacterium as a novel species under the new genus Candidatus Paraprochloron terpiosi. Comparative genomic analyses revealed that 'Paraprochloron' and Prochloron exhibit distinct genomic features and DNA replication machinery. We also characterized the metabolic potentials of 'Paraprochloron terpiosi' in carbon and nitrogen cycling and propose a model for interactions between it and T. hoshinota. This study builds a foundation for the study of the T. hoshinota microbiome and paves the way for better understanding of ecosystems involving this coral-killing sponge.


Asunto(s)
Antozoos , Cianobacterias , Microbiota , Poríferos , Animales , Antozoos/microbiología , Arrecifes de Coral , Cianobacterias/metabolismo , Poríferos/genética , Prevalencia , ARN Ribosómico 16S/genética , ARN Ribosómico 16S/metabolismo , Simbiosis
3.
Zookeys ; (422): 1-10, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-25061385

RESUMEN

Photosymbiotic ascidian fauna were surveyed in the subtidal zone off Pari Island in the Thousand Islands (Java Sea, Indonesia). Nine species were recorded: Didemnum molle, Trididemnum miniatum, Lissoclinum patella, L. punctatum, L. timorense, Diplosoma gumavirens, D. simile, D. simileguwa, and D. virens. All of these species have been previously recorded in the Ryukyu Archipelago, Japan. Diplosoma gumavirens and D. simileguwa were originally described from the Ryukyu Archipelago in 2009 and 2005, respectively, and all of the observed species are potentially widely distributed in Indo-West Pacific coral reefs.

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