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1.
Bioresour Technol ; 406: 131070, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-38971392

RESUMEN

In this study, two bioprocess models were first constructed with the newly-discovered comammox process described as one-step and two-step nitrification and evaluated against relevant experimental data. The validated models were then applied to reveal the potential effect of comammox bacteria on the granular bioreactor particularly suitable for undertaking partial nitritation/anammox (PN/A) under different operating conditions of bulk dissolved oxygen (DO) and influent NH4+. The results showed although comammox bacteria-based PN/A could achieve > 80.0 % total nitrogen (TN) removal over a relatively wider range of bulk DO and influent NH4+ (i.e., 0.25-0.40 g-O2/m3 and 470-870 g-N/m3, respectively) without significant nitrous oxide (N2O) production (< 0.1 %), the bulk DO should be finely controlled based on the influent NH4+ to avoid the undesired full nitrification by comammox bacteria. Comparatively, conventional ammonium-oxidizing bacteria (AOB)-based PN/A not only required higher bulk DO to achieve > 80.0 % TN removal but also suffered from 1.7 %∼2.8 % N2O production.


Asunto(s)
Bacterias , Reactores Biológicos , Nitrificación , Nitrógeno , Reactores Biológicos/microbiología , Nitrógeno/metabolismo , Bacterias/metabolismo , Oxígeno/metabolismo , Óxido Nitroso/metabolismo , Compuestos de Amonio/metabolismo , Oxidación-Reducción
2.
Water Res ; 259: 121805, 2024 Aug 01.
Artículo en Inglés | MEDLINE | ID: mdl-38838481

RESUMEN

Understanding the structure and activity of activated sludge (AS) microbiome is key to ensuring optimal operation of wastewater treatment processes. While high-throughput metagenomics offers a comprehensive view of AS microbiome, its cost and time demands warrant alternative approaches. This study employed machine learning methods to integrate metabolomic and metagenomic data, enabling predictions of selected microbial abundances from metabolite profiling. Model training relied on rich microbial and metabolite abundance data collected in an intensively sampled AS system, including a period of filamentous bulking, as well as a few other AS systems. Multiple linear regression out-competed other three algorithms in achieving relatively high prediction accuracy (R2 = 0.70±0.02) for the abundances of 10 selected, either keystone or core metagenome-assembled genomes (MAGs). The model predicted the abundances of filamentous Microtrichaceae and Thiotrichaceae during bulking with an error range of 14-17.8 %. This predictive power extends beyond the specific system studied, showcasing potentials for broader applications across other AS systems. Aspartate, glycine, and folate were the most influential metabolite features contributing to model performance, which were also effective indicators for filamentous bulking, with up to one week of early warning potential. This study pioneers the application of metabolomics for fast, relatively accurate and cost-effective prediction of AS community composition, enabling proactive management of AS systems towards improved efficiency and stability.


Asunto(s)
Metabolómica , Aguas del Alcantarillado , Aguas del Alcantarillado/microbiología , Microbiota , Eliminación de Residuos Líquidos/métodos , Aprendizaje Automático
3.
Front Nutr ; 11: 1385591, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38706559

RESUMEN

Zinc (Zn) is a vital micronutrient that strengthens the immune system, aids cellular activities, and treats infectious diseases. A deficiency in Zn can lead to an imbalance in the immune system. This imbalance is particularly evident in severe deficiency cases, where there is a high susceptibility to various viral infections, including COVID-19 caused by SARS-CoV-2. This review article examines the nutritional roles of Zn in human health, the maintenance of Zn concentration, and Zn uptake. As Zn is an essential trace element that plays a critical role in the immune system and is necessary for immune cell function and cell signaling, the roles of Zn in the human immune system, immune cells, interleukins, and its role in SARS-CoV-2 infection are further discussed. In summary, this review paper encapsulates the nutritional role of Zn in the human immune system, with the hope of providing specific insights into Zn research.

5.
Sci Total Environ ; 930: 172668, 2024 Jun 20.
Artículo en Inglés | MEDLINE | ID: mdl-38663625

RESUMEN

In environmental biofilms, antibiotic-resistant bacteria facilitate the persistence of susceptible counterparts under antibiotic stresses, contributing to increased community-level resistance. However, there is a lack of quantitative understanding of this protective effect and its influential factors, hindering accurate risk assessment of biofilm resistance in diverse environment. This study isolated an opportunistic Escherichia coli pathogen from soil, and engineered it with plasmids conferring antibiotic resistance. Protective effects of the ampicillin resistant strain (AmpR) on their susceptible counterparts (AmpS) were observed in ampicillin-stress colony biofilms. The concentration of ampicillin delineated protective effects into 3 zones: continuous protection (<1 MIC of AmpS), initial AmpS/R dependent (1-8 MIC of AmpS), and ineffective (>8 MIC of AmpS). Intriguingly, Zone 2 exhibited a surprising "less is more" phenomenon tuned by the initial AmpS/R ratio, where biofilm with an initially lower AmpR (1:50 vs 50:1) harbored 30-90 % more AmpR after 24 h growth under antibiotic stress. Compared to AmpS, AmpR displayed superiority in adhesion, antibiotic degradation, motility, and quorum sensing, allowing them to preferentially colonize biofilm edge and areas with higher ampicillin. An agent-based model incorporating protective effects successfully simulated tempo-spatial dynamics of AmpR and AmpS influenced by antibiotic stress and initial AmpS/R. This study provides a holistic view on the pervasive but poorly understood protective effects in biofilm, enabling development of better risk assessment and precisely targeted control strategies of biofilm resistance in diverse environment.


Asunto(s)
Antibacterianos , Biopelículas , Escherichia coli , Biopelículas/efectos de los fármacos , Antibacterianos/farmacología , Escherichia coli/efectos de los fármacos , Escherichia coli/fisiología , Farmacorresistencia Bacteriana , Ampicilina/farmacología , Pruebas de Sensibilidad Microbiana , Microbiología del Suelo
6.
PeerJ ; 12: e17176, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38560479

RESUMEN

The effects of nitrogen application or earthworms on soil respiration in the Huang-Huai-Hai Plain of China have received increasing attention. However, the response of soil carbon dioxide (CO2) emission to nitrogen application and earthworm addition is still unclear. A field experiment with nitrogen application frequency and earthworm addition was conducted in the Huang-Huai-Hai Plain. Results showed nitrogen application frequency had a significant effect on soil respiration, but neither earthworms nor their interaction with nitrogen application frequency were significant. Low-frequency nitrogen application (NL) significantly increased soil respiration by 25%, while high-frequency nitrogen application (NH), earthworm addition (E), earthworm and high-frequency nitrogen application (E*NH), and earthworm and low-frequency nitrogen application (E*NL) also increased soil respiration by 21%, 21%, 12%, and 11%, respectively. The main reason for the rise in soil respiration was alterations in the bacterial richness and keystone taxa (Myxococcales). The NH resulted in higher soil nitrogen levels compared to NL, but NL had the highest bacterial richness. The abundance of Corynebacteriales and Gammaproteobacteria were positively connected with the CO2 emissions, while Myxococcales, Thermoleophilia, and Verrucomicrobia were negatively correlated. Our findings indicate the ecological importance of bacterial communities in regulating the carbon cycle in the Huang-Huai-Hai Plain.


Asunto(s)
Myxococcales , Oligoquetos , Animales , Dióxido de Carbono , Glycine max , Nitrógeno/farmacología , Suelo , Productos Agrícolas
7.
J Environ Manage ; 355: 120194, 2024 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-38430875

RESUMEN

Strengthening the activity competitiveness of anaerobic ammonium oxidation (anammox) bacteria (AnAOB) under low nitrogen conditions is indispensable for mainstream anammox application. This study demonstrates that sponge iron addition (42.8 g/L) effectively increased apparent AnAOB activity and extracellular polymeric substance (EPS) production of low load anammox biofilms cultivated under low (influent of 60 mg N/L) and even ultra-low (influent of 10 mg N/L) nitrogen conditions. In-situ batch tests showed that after sponge iron addition the specific AnAOB activity in the low and ultra-low nitrogen systems further increased to 1.18 and 0.47 mmol/g VSS/h, respectively, with an apparent growth rate for AnAOB of 0.011 ± 0.001 d-1 and 0.004 ± 0.001 d-1, respectively. The averaged EPS concentration of anammox biofilm in both low (from 35.84 to 71.05 mg/g VSS) and ultra-low (from 44.14 to 57.59 mg/g VSS) nitrogen systems increased significantly, while a higher EPS protein/polysaccharide ratio, which was positively correlated with AnAOB activity, was observed in the low nitrogen system (3.54 ± 0.34) than that in the ultra-low nitrogen system (1.82 ± 0.10). In addition, Candidatus Brocadia was detected as dominant AnAOB in the anammox biofilm under the low (12.2 %) and ultra-low (24.7 %) nitrogen condition. Notably, the genus Streptomyces (26.3 %), capable for funge-like codenitrification, increased unexpectedly in the low nitrogen system, but not affecting the nitrogen removal performance. Therefore, using sponge iron to strengthen AnAOB activity under low nitrogen conditions is feasible, providing support for mainstream anammox applications.


Asunto(s)
Compuestos de Amonio , Nitrógeno , Matriz Extracelular de Sustancias Poliméricas , Oxidación Anaeróbica del Amoníaco , Reactores Biológicos/microbiología , Biopelículas , Oxidación-Reducción , Aguas del Alcantarillado , Desnitrificación , Anaerobiosis
8.
Water Res ; 252: 121235, 2024 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-38310801

RESUMEN

Cephalosporins have been widely applied in clinical and veterinary settings and detected at increasing concentrations in water environments. They potentially induce high-level antibiotic resistance at environmental concentrations. This study characterized how typical wastewater bacteria developed heritable antibiotic resistance under exposure to different cephalosporins, including pharmacophore-resistance correlation, resistance mechanism, and occurrence of resistance-relevant mutations in different water environments. Wastewater-isolated E. coli JX1 was exposed to eight cephalosporins individually at 25 µg/L for 60 days. Multidrug resistance developed and diverse mutations arose in selected mutants, where a single mutation in ATP phosphoribosyltransferase encoding gene (hisG) resulted in up to 128-fold increase in resistance to meropenem. Molprint2D pharma RQSAR analysis revealed that hydrogen-bond acceptors and hydrophobic groups in the R1 and R2 substituents of cephalosporins contributed positively to antibiotic resistance. Some of these pharmacophores may persist during bio- or photo-degradation in the environment. hisG mutation confers a novel resistance mechanism by inhibiting fatty acid degradation, and its variants were more abundant in water-related E. coli (especially in the effluent of wastewater treatment plants) compared with those in non-water environments. These results suggest that specific degradation of particular pharmacophores in cephalosporins could be useful for controlling resistance development, and mutations in previously unreported resistance genes (e.g., hisG) can lead to overlooked antibiotic resistance risks in water environments.


Asunto(s)
Cefalosporinas , Aguas Residuales , Cefalosporinas/farmacología , Escherichia coli , Farmacóforo , Antibacterianos/farmacología , Antibacterianos/análisis , Mutación , Agua/análisis
9.
Bioresour Technol ; 393: 130047, 2024 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-37989421

RESUMEN

A salt-tolerant strain, Pseudomonas mendocina A4, was isolated from brackish-water ponds showing simultaneous heterotrophic nitrification-aerobic denitrification and phosphorus removal capability. The optimal conditions for nitrogen and phosphate removal of strain A4 were pH 7-8, carbon/nitrogen ratio 10, phosphorus/nitrogen ratio 0.2, temperature 30 °C, and salinity range of 0-5 % using sodium succinate as the carbon source. The nitrogen and phosphate removal efficiencies were 96-100 % and 88-96 % within 24 h, respectively. The nitrogen and phosphate removal processes were matched with the modified Gompertz model, and the underlying mechanisms were confirmed by the activities of key metabolic enzymes. Under 10 % salinity, the immobilization technology was employed to enhance the nitrogen and phosphate removal efficiencies of strain A4, achieving 87 % and 76 %, respectively. These findings highlight the potential application of strain A4 in both freshwater and marine culture wastewater treatment.


Asunto(s)
Desnitrificación , Radioisótopos de Nitrógeno , Pseudomonas mendocina , Fosfatos , Pseudomonas mendocina/metabolismo , Nitrógeno/metabolismo , Aerobiosis , Nitrificación , Fósforo , Procesos Heterotróficos , Carbono , Nitritos/química
10.
Environ Sci Technol ; 57(45): 17324-17337, 2023 11 14.
Artículo en Inglés | MEDLINE | ID: mdl-37930060

RESUMEN

Phages are increasingly recognized for their importance in microbial aggregates, including their influence on microbial ecosystem services and biotechnology applications. However, the adaptive strategies and ecological functions of phages in different aggregates remain largely unexplored. Herein, we used membrane bioreactors to investigate bacterium-phage interactions and related microbial functions within suspended and attached microbial aggregates (SMA vs AMA). SMA and AMA represent distinct microbial habitats where bacterial communities display distinct patterns in terms of dominant species, keystone species, and bacterial networks. However, bacteria and phages in both aggregates exhibited high lysogenicity, with 60% lysogenic phages in the virome and 70% lysogenic metagenome-assembled genomes of bacteria. Moreover, substantial phages exhibited broad host ranges (34% in SMA and 42% in AMA) and closely interacted with habitat generalist species (43% in SMA and 49% in AMA) as adaptive strategies in stressful operation environments. Following a mutualistic pattern, phage-carried auxiliary metabolic genes (pAMGs; 238 types in total) presumably contributed to the bacterial survival and aggregate stability. The SMA-pAMGs were mainly associated with energy metabolism, while the AMA-pAMGs were mainly associated with antioxidant biosynthesis and the synthesis of extracellular polymeric substances, representing habitat-dependent patterns. Overall, this study advanced our understanding of phage adaptive strategies in microbial aggregate habitats and emphasized the importance of bacterium-phage symbiosis in the stability of microbial aggregates.


Asunto(s)
Bacteriófagos , Microbiota , Bacteriófagos/genética , Simbiosis , Bacterias/genética , Metagenoma
11.
Proc Natl Acad Sci U S A ; 120(44): e2300095120, 2023 Oct 31.
Artículo en Inglés | MEDLINE | ID: mdl-37874856

RESUMEN

The splenic interendothelial slits fulfill the essential function of continuously filtering red blood cells (RBCs) from the bloodstream to eliminate abnormal and aged cells. To date, the process by which 8 [Formula: see text]m RBCs pass through 0.3 [Formula: see text]m-wide slits remains enigmatic. Does the slit caliber increase during RBC passage as sometimes suggested? Here, we elucidated the mechanisms that govern the RBC retention or passage dynamics in slits by combining multiscale modeling, live imaging, and microfluidic experiments on an original device with submicron-wide physiologically calibrated slits. We observed that healthy RBCs pass through 0.28 [Formula: see text]m-wide rigid slits at 37 °C. To achieve this feat, they must meet two requirements. Geometrically, their surface area-to-volume ratio must be compatible with a shape in two tether-connected equal spheres. Mechanically, the cells with a low surface area-to-volume ratio (28% of RBCs in a 0.4 [Formula: see text]m-wide slit) must locally unfold their spectrin cytoskeleton inside the slit. In contrast, activation of the mechanosensitive PIEZO1 channel is not required. The RBC transit time through the slits follows a [Formula: see text]1 and [Formula: see text]3 power law with in-slit pressure drop and slip width, respectively. This law is similar to that of a Newtonian fluid in a two-dimensional Poiseuille flow, showing that the dynamics of RBCs is controlled by their cytoplasmic viscosity. Altogether, our results show that filtration through submicron-wide slits is possible without further slit opening. Furthermore, our approach addresses the critical need for in vitro evaluation of splenic clearance of diseased or engineered RBCs for transfusion and drug delivery.


Asunto(s)
Eritrocitos , Bazo , Eritrocitos/metabolismo , Citoesqueleto , Microfluídica , Espectrina/metabolismo
12.
Artículo en Inglés | MEDLINE | ID: mdl-37883838

RESUMEN

The Pacific white shrimp (Litopenaeus vannamei) is a euryhaline crustacean capable of tolerating a wide range of ambient salinity, but the strategies of hepatopancreas to rapid adaptive or acute stimulatory responses to extremely low salinity fluctuations remains unclear. In this study, we integrated transcriptomic and proteomic analyses on the hepatopancreas derived from rapid adaptative (RA) and acute stimulatory (AS) responses to extremely low salinity stress (0.3 ppt) to unveil specific regulatory mechanisms. The RA group displayed normal epithelial cells and tubule structures, while the AS group showed histological changes and lesions. A total of 754 and 649 differentially expressed genes (DEGs) were identified in RA and AS treatments, respectively. For proteome, a total of 206 and 66 differentially expressed proteins (DEPs) were obtained in the RA/CT and AS/CT comparison groups, respectively. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis were conducted among the DEGs and DEPs, revealing that metabolic related pathways were significantly enriched pathways in both comparison groups. In addition, correlation analysis of transcriptomic and proteomic results showed that 20 and 3 pairs of DEGs/DEPs were identified in RA vs. CT and AS vs. CT comparison groups, respectively. This study is the first report on the rapid adaptive and acute stimulatory transcriptomic and proteomic responses of L. vannamei to extremely low salinity, shedding light on the mechanisms underlying osmoregulation in euryhaline crustaceans.


Asunto(s)
Penaeidae , Transcriptoma , Animales , Proteómica , Perfilación de la Expresión Génica , Osmorregulación , Estrés Salino , Penaeidae/genética , Salinidad
13.
Environ Sci Technol ; 57(43): 16190-16205, 2023 10 31.
Artículo en Inglés | MEDLINE | ID: mdl-37752410

RESUMEN

Bisphenol A (BPA) is a well-known endocrine-disrupting chemical (EDC) that has estrogenic activities. In addition to disrupting reproductive development and function via estrogenic signaling pathways, BPA can also interfere with nonreproductive functions through nonestrogenic pathways; however, the mechanisms underlying such nonestrogenic activities are not well understood. In this study, we demonstrated that BPA could disrupt otolith formation during the early development of zebrafish with long-lasting ethological effects. Using multiple mutants of estrogen receptors, we provided strong genetic evidence that the BPA-induced otolith malformation was independent of estrogen signaling. Transcriptome analysis revealed that two genes related to otolith development, otopetrin 1 (otop1) and starmaker (stm), decreased their expression significantly after BPA exposure. Knockout of both otop1 and stm genes could phenocopy the BPA-induced otolith malformation, while microinjection of their mRNAs could rescue the BPA-induced abnormalities of otolith formation. Further experiments showed that BPA inhibited the expression of otop1 and stm by activating the MEK/ERK-EZH2-H3K27me3 signaling pathway. Taken together, our study provided comprehensive genetic and molecular evidence that BPA induced the otolith malformation through nonestrogenic pathway during zebrafish early development and its activities involved epigenetic control of key genes (e.g., otop1 and stm) participating in otolith formation.


Asunto(s)
Disruptores Endocrinos , Pez Cebra , Animales , Pez Cebra/genética , Membrana Otolítica , Fenoles/toxicidad , Compuestos de Bencidrilo/toxicidad , Epigénesis Genética , Disruptores Endocrinos/toxicidad , Disruptores Endocrinos/metabolismo
14.
J Environ Manage ; 338: 117836, 2023 Jul 15.
Artículo en Inglés | MEDLINE | ID: mdl-37011530

RESUMEN

The slow startup is the major obstacle to the application of anaerobic ammonium oxidation (anammox) process in mainstream wastewater treatment. Extracellular polymeric substances (EPS) are one potential resource for stable anammox reactor operation. Response surface analysis was used to optimize the specific anammox activity (SAA) with the addition of EPS; SAA was maximum at a temperature of 35 °C and the EPS concentration of 4 mg/L. By comparing the nitrogen removal of anammox reactors with no EPS (R0), immobilized EPS (EPS-alginate beads) (R1), and liquid EPS (R2), we found that EPS-alginate beads significantly speed up the startup of anammox process and enable the start time to be shortened from 31 to 19 days. As a result of the higher MLVSS content, higher zeta potential, and lower SVI30, anammox granules of R1 exhibited a stronger capacity to aggregate. Moreover, EPS extracted from R1 had higher flocculation efficiencies than EPS derived from R0 and R2. Phylogenetic analysis of 16S rRNA genes revealed that the main anammox species in R1 is Kuenenia taxon. To clarify the relative significance of stochastic vs deterministic processes in the anammox community, neutral model and network analysis are employed. In R1, community assembly became more deterministic and stable than in other cultures. Our results show that EPS might inhibit heterotrophic denitrification and thereby promote anammox activity. This study suggested a quick start-up strategy for the anammox process based on resource recovery, which is helpful for environmentally sustainable and energy-efficient wastewater treatment.


Asunto(s)
Reactores Biológicos , Matriz Extracelular de Sustancias Poliméricas , Reactores Biológicos/microbiología , Filogenia , Oxidación Anaeróbica del Amoníaco , ARN Ribosómico 16S , Aguas del Alcantarillado , Oxidación-Reducción , Nitrógeno/farmacología , Desnitrificación , Anaerobiosis
15.
J Hazard Mater ; 448: 130867, 2023 04 15.
Artículo en Inglés | MEDLINE | ID: mdl-36758429

RESUMEN

Antibiotics pollution in soil poses increasing threats to human health due to stimulated proliferation and transmission of antibiotic resistance genes (ARGs). Nanoscale zero-valent iron (NZVI) is a promising material for the remediation of antibiotics, but how NZVI affects the diversity, abundance, and horizontal gene transfer potentials of ARGs remains unclear. Herein, the biotic and abiotic effects of NZVI at different concentrations on tetracyclines (TCs) and the associated ARGs were investigated. Results showed NZVI could effectively accelerate the degradation of TCs, which increased from 51.38% (without NZVI) to 57.96%- 71.66% (1-10 g NZVI/kg) in 20 days. Biotic degradation contributed to 66.10%- 76.30% of the total TCs removal. NZVI induced TCs biodegradation was probably due to alleviated toxicity of TCs on cells and increased microbial biomass and enzyme activities. Additionally, TCs-related ARGs were attenuated with decreased horizontal gene transfer potentials of intI1 and ISCR1, but opposite effects were observed for non TC-related ARGs, especially during excess exposure to NZVI. This study illustrated the possibility of remediating of antibiotic contaminated soil by NZVI and meanwhile reducing the potential risks of ARGs.


Asunto(s)
Restauración y Remediación Ambiental , Tetraciclinas , Humanos , Tetraciclinas/farmacología , Suelo , Hierro , Antibacterianos/farmacología , Biodegradación Ambiental
16.
Sci Total Environ ; 871: 161801, 2023 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-36739024

RESUMEN

Chemical oxidation is a promising technology for the remediation of organics-contaminated soils. However, residual oxidants and transformation products have adverse effects on microbial activities. This work aimed at moderate chemical oxidation coupled with microbial degradation (MOMD) for the removal of benzo[a]pyrene (BaP) by optimizing the type and dosage of oxidants. Potassium permanganate (KMnO4), Fe2+ + sodium persulfate (Fe2+ + PS), Fenton's reagent (Fe2+ + H2O2), and hydrogen peroxide (H2O2) were compared for BaP removal from loam clay and sandy soils. Overall, the removal efficiency of BaP by a moderate dose of oxidant coupled indigenous microorganism was slightly lower than that by a high dose of relevant oxidant. The contributions of microbial degradation to the total removal of BaP varied for different oxidants and soils. The removal efficiency of BaP from loam clay sandy soil by a moderate dose of KMnO4 (25 mmol/L) was 94.3 ± 1.1 % and 92.5 ± 1.8 %, respectively, which were both relatively higher than those under other conditions. The indirect carbon footprint yielded by the moderate dose of oxidants was 39.2-72.8 % less than that by the complete oxidation. A moderate dose of oxidants also reduced disturbances to soil pH and OC. The microbial communities after MOMD treatment were dominated by Burkholderiaceae, Enterobacteriaceae, Alicyclobacillaceae, and Oxalobacteraceae. These dominant microorganisms promoted the removal of BaP through the expression of polycyclic aromatic hydrocarbon-ring hydroxylated dioxygenase gene. Compared with complete chemical oxidation, MOMD is also a promising technique with the utilization of indigenous microorganism for remediating BaP-contaminated soils.


Asunto(s)
Hidrocarburos Policíclicos Aromáticos , Contaminantes del Suelo , Peróxido de Hidrógeno/química , Benzo(a)pireno/metabolismo , Arcilla , Contaminantes del Suelo/análisis , Oxidantes/química , Hidrocarburos Policíclicos Aromáticos/análisis , Suelo/química , Arena
17.
Metabolites ; 13(1)2023 Jan 13.
Artículo en Inglés | MEDLINE | ID: mdl-36677050

RESUMEN

Mitochondrial-derived peptides are a family of peptides encoded by short open reading frames in the mitochondrial genome, which have regulatory effects on mitochondrial functions, gene expression, and metabolic homeostasis of the body. As a new member of the mitochondrial-derived peptide family, mitochondrial open reading frame of the 12S rRNA-c (MOTS-c) is regarding a peptide hormone that could reduce insulin resistance, prevent obesity, improve muscle function, promote bone metabolism, enhance immune regulation, and postpone aging. MOTS-c plays these physiological functions mainly through activating the AICAR-AMPK signaling pathways by disrupting the folate-methionine cycle in cells. Recent studies have shown that the above hormonal effect can be achieved through MOTS-c regulating the expression of genes such as GLUT4, STAT3, and IL-10. However, there is a lack of articles summarizing the genes and pathways involved in the physiological activity of MOTS-c. This article aims to summarize and interpret the interesting and updated findings of MOTS-c-associated genes and pathways involved in pathological metabolic processes. Finally, it is expected to develop novel diagnostic markers and treatment approaches with MOTS-c to prevent and treat metabolic disorders in the future.

18.
Sci Total Environ ; 869: 161809, 2023 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-36702282

RESUMEN

Spore-forming bacteria known as sporobiota are widespread in diverse environments from terrestrial and aquatic habitats to industrial and healthcare systems. Studies on sporobiota have been mainly focused on food processing and clinical fields, while a large amount of sporobiota exist in natural environments. Due to their persistence and capabilities of transmitting virulence factors and antibiotic resistant genes, environmental sporobiota could pose significant health risks to humans. These risks could increase as global warming and environmental pollution has altered the life cycle of sporobiota. This review summarizes the current knowledge of environmental sporobiota, including their occurrence, characteristics, and functions. An interaction network among clinical-, food-related, and environment-related sporobiota is constructed. Recent and effective methods for detecting and disinfecting environmental sporobiota are also discussed. Key problems and future research needs for better understanding and reducing the risks of environmental sporobiota and sporobiome are proposed.


Asunto(s)
Ecosistema , Contaminación Ambiental , Humanos , Bacterias
19.
Environ Pollut ; 316(Pt 1): 120466, 2023 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-36265726

RESUMEN

Rice exposed to organic pollutants such as polybrominated diphenyl ethers (PBDEs) usually experiences reduced biomass and increased soluble sugar content. This study showed that 2, 2', 4, 4'-tetrabromodiphenyl ether (BDE-47) led to increased glucose, fructose, and sucrose in rice leaves, accompanied by decreased photosynthetic rate and biomass. In order to identify the key enzyme that BDE-47 interacted with, a diazirine-alkynyl photoaffinity probe was designed, and photoaffinity labeling based chemoproteomics was conducted. Among all differentially expressed proteins, fructose-1, 6-bisphosphate aldolase (FBA) involved in carbohydrate metabolism was most likely the target protein of BDE-47. Spectral techniques and molecular docking analysis further revealed that the pollutant-protein interaction was driven by hydrophobic force. BDE-47 inhibited FBA catalytic efficiency by competing with its substrate, fructose-1, 6-diphosphate (F-1, 6-P), leading to soluble sugar accumulation, photosynthetic rate decline and biomass reduction. This study unraveled the influencing mechanism of PBDEs on rice by combining the novel photoaffinity labeling-based chemoproteomics with conventional proteomics. The improved knowledge on direct interaction between organic pollutants and proteins will help alleviate the harmful effects of soil pollution on plants.


Asunto(s)
Contaminantes Ambientales , Oryza , Éteres Difenilos Halogenados/análisis , Oryza/metabolismo , Simulación del Acoplamiento Molecular , Contaminantes Ambientales/metabolismo , Metabolismo de los Hidratos de Carbono , Fructosa/metabolismo , Fructosa/farmacología , Azúcares
20.
J Hazard Mater ; 444(Pt A): 130338, 2023 02 15.
Artículo en Inglés | MEDLINE | ID: mdl-36417780

RESUMEN

The recalcitrant ß-blockers have been widely detected in aquatic environments up to several hundred µg/L, which are major contributors to ß1 antagonistic activities in wastewater. Their biodegradation mechanisms remain obscure, hindering the development of efficient removal techniques. This study constructed the biodegradation pathways for three typical ß-blockers, namely atenolol, metoprolol, and propranolol, assessed the toxicity of their major biotransformation products, and identified the key enzyme catalyzing the O-dealkylation reaction leading to pollutant mineralization. Atenolol and metoprolol degradation was more efficient than that of propranolol by activated sludge, producing metoprolol acid (MTPA) as a major intermediate. Hydrogenophaga sp. YM1 isolated from activated sludge possess the α-ketoglutarate dependent dioxygenase (TfdA) responsible for O-dealkylation of MTPA and propranolol, producing 4-hydroxyphenylacetic acid (4-HPA) that can be further degraded and ultimately enters the TCA cycle. The role of TfdA was verified by proteomics, enzyme stimulation/inhibition tests, and gene knockout experiments. Molecular docking suggests its different interactions with MTPA and propranolol. Acetate facilitated the degradation of ß-blockers efficiently. The results may shed light on enhanced biological removals of broader ß-blockers and their transformation products in the environment.


Asunto(s)
Propranolol , Aguas Residuales , Metoprolol , Aguas del Alcantarillado , Atenolol , Simulación del Acoplamiento Molecular , Antagonistas Adrenérgicos beta
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