Coffee brewing sonoreactor for reducing the time of cold brew from several hours to minutes while maintaining sensory attributes.

This research designed and developed an ultrasonic reactor for a fast and on demand production of cold brew coffee, remarkably reducing the brewing time from 24 h to less than 3 min. The technology was engineered by utilizing resonance to induce ultrasonic waves around the walls of the brewing basket of an espresso machine. The sound transmission system comprised a transducer, a horn and a brewing basket. This arrangement transformed the coffee basket into an effective sonoreactor that injected sound waves at multiple points through its walls, thereby generating multiple regions for acoustic cavitation within the reactor. Furthermore, acoustic streaming induced greater mixing and enhanced mass transfer during brewing. The design was accomplished by modeling the transmission of sound, and acoustic cavitation. Brew characterization and chemical composition analysis was performed, considering factors such as pH, acidity, color, and the composition of caffeine, fatty acids, and volatiles. The efficiency of the extraction increased by decreasing the basket loading percentage (BLP). For instance, sonicating at 100 W doubled the extraction yield and caffeine concentration, from 15.05 % to 33.44 % at BLP = 33 %, and from 0.91 mg/mL to 1.84 mg/mL at BLP = 67 %, respectively. The total fatty acids increased from 1.16 mg/mL to 9.20 mg/mL, representing an eightfold increase, at BLP = 33 %. Finally, a sensory analysis was conducted to evaluate appearance, aroma, texture, flavor, and aftertaste, which demonstrated that coffee brewed for 1 and 3 min in the sonoreactor exhibited almost undistinguishable properties compared to a standard 24 h brewing without ultrasound.

Fast and Sensitive Detection of Ammonia from Electrochemical Nitrogen Reduction Reactions by 1 H NMR with Radiation Damping.

A facile NMR method is reported for analysis of ammonia from the electrochemical reduction of nitrogen, which compares a calibrated colorimetric method, a calibrated 1 H NMR method and two 1 H NMR direct measurements using external reference materials. Unlike spectrophotometric methods, 1 H NMR requires less bench time and does not require separation of ammonia from the electrolyte. A novel approach to the problem of radiation damping in NMR measurements considered the specific role of hardware tuning. Radiation damping is suppressed improving signal-to-noise ratio and detection limit (1.5 µg L-1 ). The method is demonstrated to be effective for the analysis of ammonia from direct electrochemical nitrogen reduction in KOH, and from lithium-mediated nitrogen reduction in a non-aqueous solution. An uncertainty budget is prepared for the measurement of ammonia.

Degree-days and off-host longevity of cattle fever ticks, Boophilus spp. (Acari: Ixodidae) in south Texas pastures.

Cattle fever ticks, Boophilus microplus (Canestrini) and Boophilus annulatus (Say), are native to Eurasia and have invaded the New World as vectors of bovine Babesiosis. Due to severe losses in livestock production, an eradication program by the USDA was established. Premises infested with Boophilus ticks are subject to regulatory oversight that includes acaricide treatment and quarantine. The quarantine duration varies between summer through winter and is based on the available information on the persistence of the off-host stages in pastures far from south Texas. The objective of this study was to assess the specific effect of thermal stress measured in degree-days on the longevity of B. annulatus and B. microplus off-host stages in south Texas pastures. Our results demonstrate that the longest off-host persistence for B. annulatus was 142 days under canopied habitat in the winter and 130 days in the summer. On the other hand, B. microplus off-host persistence was 113 days under canopy and 103 days in exposed habitat, both in winter. The results indicate that temperature was a key variable that prolonged the survival of B. annulatus but not B. microplus. In areas such as south Texas at the northernmost extent of B. microplus range, where mild winters prevail, we found a maximum persistence of less than 4 months (113 days), very close to the previous published record of 116 days. A reduction in the Texas pasture quarantine period from 9 months to 6 months would be justified for this species.

Understanding the origins of and influences on precipitation major ion chemistry on the Island of O'ahu, Hawai'i.

Precipitation is the primary groundwater source for the Island of O'ahu, Hawai'i, USA, and is an important source of terrestrial nutrients. Since Pacific Islands are particularly vulnerable to the impacts of climate change, they are important venues for studying the controls on and fluctuations in precipitation chemistry. Spatial variations in some of the dissolved rainfall ions can also be of value as natural geochemical tracers in examining surface and groundwater flow. This study collected and chemically analyzed bulk precipitation from 20 sites across the Island of O'ahu approximately quarterly between April 2018 and August 2021. The new precipitation chemistry data were integrated with previously published precipitation data to characterize major ion composition and examine the atmospheric processes controlling inorganic ion deposition. Linear regression and multivariate analysis were used to quantify the relationships among major ions and to assess the impacts of various environmental and meteorological factors on precipitation chemistry. Ordinary kriging and inverse distance weighted interpolations were conducted to help visualize spatial variations in major ion deposition. The results clearly indicate that ocean sea spray is the primary driver of precipitation inorganic chemistry, with marine sea salt aerosols accounting for more than 90% of the measured ion load. However, they also show that various weather patterns and nutrient sources impact inorganic deposition. Most notably, upper atmospheric transport of Asian continental dust during Hawaiian wet seasons, Ca2+ from local sedimentary deposits, and anthropogenic K+ from agricultural activity appear to be substantial non-marine deposition sources. This study synthesizes data from multiple sources into the most spatially and topographically diverse precipitation collector network on O'ahu to date. The findings from this effort help establish a baseline for assessing future fluctuations in inorganic ion deposition and lay important groundwork for examining connections between precipitation and groundwater chemistry within the study area.

Application of statistics to correlate groundwater chemistry with land use on O'ahu, Hawai'i.

This study compiles commonly available groundwater chemistry data from the Pearl Harbor Sole Source Aquifer (SSA), Hawai'i-O'ahu's primary drinking water source-and applies hierarchical clustering analysis (HCA), principal component analyses (PCA), piper diagrams, and box plots with geospatial analysis to better define groundwater regions and correlate groundwater chemistry in those regions with land use. Groundwater in this aquifer recharges and flows through chemically similar soil and rocks, such that anthropogenic activities are a primary influence on the chemical variability of the aquifer's differing regions. Our analyses link specific chemical species in groundwater to land use/cover categories: urban, agriculture, and natural and anthropogenically-induced saline water intrusion. To create distinct statistical groupings with different groundwater chemistry compositions, it was important that the suite of parameters used in the statistical analysis do not covary. In our case, Cl- covaried with several major ions; however, by including F-, alkalinity, and SiOx that do not covary with Cl- in the covariance matrix, we produced improved spatial grouping of HCA clusters and stronger affinities to land use designations. Results show that dominant groundwater chemistry changes with land use along flow paths. These results pertain to areas where groundwater flows from conservation land in high recharge areas of O'ahu's mountain ranges to urban and agricultural land use regions: groundwater retains its source characteristics until about 3-6 km into agricultural and urban zoned lands. Ultimately, this study outlines a simple method for water quality regulators to use groundwater chemistry to identify risks of target contaminants based on land use.

Evaluation of the in vitro acaricidal effect of five organic compounds on the cattle fever tick Rhipicephalus (Boophilus) microplus (Acari: Ixodidae).

The cattle fever tick, Rhipicephalus (Boophilus) microplus, is the most economically important tick worldwide. Infestations with this tick can lead to direct damage and cattle mortality due to the transmission of potentially deadly pathogens. Management of this tick species has been focused on the use of synthetical acaricides; however, the emergence of acaricide resistance to single or multiple active ingredients has resulted in a need for novel acaricide compounds. Among potential avenues for the discovery of novel acaricides are plant-derived compounds. The efficacy of five organic compounds (nootkatone, Stop the Bites®, BioUD®, lavender oil, and cedarwood oil) was evaluated using larval immersion tests (LITs), repellency assays, and adult immersion tests (AITs). The results from the LITs indicate that three of the organic compounds (NootkaShield™, Stop the Bites, BioUD) led to significant mortalities at low concentrations (0.2, 0.02, and 0.08%, respectively). By comparison, lavender and cedar oil led to around 90% mortality at 10 and 1% concentrations, respectively. Similarly, NootkaShield, Stop the Bites, and BioUD had strong repellent properties with over 90% repellency at the two highest concentrations tested. Using the FAO 2004 guidelines, we evaluated the effectiveness of these organic compounds at reducing the fecundity of R. (B.) microplus and show that Nootkatone, Stop the Bites, and BioUD may significantly decrease tick populations (Drummond's index > 90% at concentrations of 5%), highlighting their potential as alternatives to synthetic acaricides for the control of cattle fever ticks.

AMP-activated protein kinase activators have compound and concentration-specific effects on brain metabolism.

AMP-activated protein kinase (AMPK) is a key sensor of energy balance playing important roles in the balancing of anabolic and catabolic activities. The high energy demands of the brain and its limited capacity to store energy indicate that AMPK may play a significant role in brain metabolism. Here, we activated AMPK in guinea pig cortical tissue slices, both directly with A769662 and PF 06409577 and indirectly with AICAR and metformin. We studied the resultant metabolism of [1-13 C]glucose and [1,2-13 C]acetate using NMR spectroscopy. We found distinct activator concentration-dependent effects on metabolism, which ranged from decreased metabolic pool sizes at EC50 activator concentrations with no expected stimulation in glycolytic flux to increased aerobic glycolysis and decreased pyruvate metabolism with certain activators. Further, activation with direct versus indirect activators produced distinct metabolic outcomes at both low (EC50 ) and higher (EC50 × 10) concentrations. Specific direct activation of ß1-containing AMPK isoforms with PF 06409577 resulted in increased Krebs cycle activity, restoring pyruvate metabolism while A769662 increased lactate and alanine production, as well as labelling of citrate and glutamine. These results reveal a complex metabolic response to AMPK activators in brain beyond increased aerobic glycolysis and indicate that further research is warranted into their concentration- and mechanism-dependent impact.

Molecular Recognition Patterns between Vitamin B12 and Proteins Explored through STD-NMR and In Silico Studies.

Ligand-receptor molecular recognition is the basis of biological processes. The Saturation Transfer Difference-NMR (STD-NMR) technique has been recently used to gain qualitative and quantitative information about physiological interactions at an atomic resolution. The molecular recognition patterns between the cyanocobalamin (CNBL)/aqua cobalamin (OHBL) and different plant and animal proteins were investigated via STD-NMR supplemented by molecular docking. This study demonstrates that myoglobin has the highest binding affinity and that gluten has the lowest affinity. Casein also shows a higher binding affinity for cyanocobalamin when compared with that of plant-based proteins. STD-NMR results showed the moderate binding capability of casein with both CNBL and OHBL. Computer simulation confirmed the recognition mode in theory and was compared with the experiments. This work is beneficial for understanding the binding affinity and biological action of cyanocobalamin and will attract researchers to use NMR technology to link the chemical and physiological properties of nutrients.

Technical commentary to: Direct aerobic NSZD of a basalt vadose zone LNAPL source in Hawaii, McHugh et al., JCH #235 (2020).

The subject Paper (McHugh et al., 2020) uses carbon dioxide and net thermal signatures to derive conclusions about the rates of natural source zone depletion (NSZD), as well as the location of residual fuel in the formation. We concur that both data sets are indicators of active fuel biodegradation, however, the simplifications of McHugh et al. render its estimates of NSZD rates uncertain and likely over-estimated. We cannot infer what role this degradation capacity may play in site management because: a) the biodegradation evidence is spatially limited and cannot be linked to LNAPL source zones; b) the LNAPL source zones are so poorly understood that we have no mass constraints or balances; and c) this is a very heterogeneous site, in terms of LNAPL source locations, masses, rates, and related subsurface properties. Consequently, much McHugh et al., 2020 amounts to speculative hypotheses and estimates of NSZD that are unbounded by confirmatory data. Several of the McHugh et al. authors prepared a conceptual site model (CSM) report that can be downloaded from the EPA website: https://www.epa.gov/sites/production/files/201907/documents/red_hill_conceptual_site_model_20190630-redacted.pdf. This CSM report incorporates the conclusions of McHugh et al., 2020 as part of a broader interpretation of a generally safe setting with regard to potential aquifer damages being caused by past and future fuel releases because of the assumed large fuel holding and assimilative capacities. Substantial impacts to the aquifer caused by recent fuel releases (May and November 2021) have contaminated drinking water and affected thousands of base residents. These aquifer impact events serve to highlight the importance of adequate technical detail in evaluations, particularly in complex settings like at the subject site. A partial synopsis of these recent fuel release events can be found at: https://www.hawaiipublicradio.org/local-news/2021-12-21/confused-about-the-timeline-for-the-red-hill-fuel-storage-facility-and-contaminated-water-read-this.

Peroxisome proliferator activated receptor-γ agonist pioglitazone improves vascular and metabolic dysfunction in systemic lupus erythematosus.

OBJECTIVES: Premature cardiovascular events in systemic lupus erythematosus (SLE) contribute to morbidity and mortality, with no effective preventive strategies described to date. Immune dysregulation and metabolic disturbances appear to play prominent roles in the induction of vascular disease in SLE. The peroxisome proliferator activated receptor-gamma agonist pioglitazone (PGZ suppresses vascular damage and immune dysregulation in murine lupus and improves endothelial dysfunction in other inflammatory diseases. We hypothesised that PGZ could improve vascular dysfunction and cardiometabolic parameters in SLE. METHODS: Eighty SLE subjects with mild to severe disease activity were randomised to a sequence of PGZ followed by placebo for 3 months, or vice versa, in a double-blind, cross-over design with a 2-month wash-out period. Primary endpoints were parameters of endothelial function and arterial inflammation, measured by multimodal assessments. Additional outcome measures of disease activity, neutrophil dysregulation, metabolic disturbances and gene expression studies were performed. RESULTS: Seventy-two subjects completed the study. PGZ was associated with a significant reduction in Cardio-Ankle Vascular Index (a measure of arterial stiffness) compared with placebo. Various metabolic parameters improved with PGZ, including insulin resistance and lipoprotein profiles. Circulating neutrophil extracellular trap levels also significantly decreased with PGZ compared with placebo. Most adverse events experienced while on PGZ were mild and resolved with reduction in PGZ dose. CONCLUSION: PGZ was well tolerated and induced significant improvement in vascular stiffness and cardiometabolic parameters in SLE. The results suggest that PGZ should be further explored as a modulator of cardiovascular disease risk in SLE. TRIAL REGISTRATION NUMBER: NCT02338999.

Isolation of microRNAs from Tick Ex Vivo Salivary Gland Cultures and Extracellular Vesicles.

Ticks are important ectoparasites that can vector multiple pathogens. The salivary glands of ticks are essential for feeding as their saliva contains many effectors with pharmaceutical properties that can diminish host immune responses and enhance pathogen transmission. One group of such effectors are microRNAs (miRNAs). miRNAs are short non-coding sequences that regulate host gene expression at the tick-host interface and within the organs of the tick. These small RNAs are transported in the tick saliva via extracellular vesicles (EVs), which serve inter-and intracellular communication. Vesicles containing miRNAs have been identified in the saliva of ticks. However, little is known about the roles and profiles of the miRNAs in tick salivary vesicles and glands. Furthermore, the study of vesicles and miRNAs in tick saliva requires tedious procedures to collect tick saliva. This protocol aims to develop and validate a method for isolating miRNAs from purified extracellular vesicles produced by ex vivo organ cultures. The materials and methodology needed to extract miRNAs from extracellular vesicles and tick salivary glands are described herein.

Medicated corn feeders to disinfest cattle fever ticks, Boophilus (Boophilus) microplus (Acari: Ixodidae), from a suburban population of white-tailed deer, Odocoileus virginianus (Cervidae).

Following its eradication from the USA, the cattle fever tick, Rhipicephalus (Boophilus) microplus (Canestrini), a vector of bovine babesiosis, has made episodic incursions into, and sometimes beyond, an established barrier zone separating tick-free from endemic areas. In large part the incursions involve hosting and transport by wild ungulates, particularly deer and antelope. One approach to disinfest ticks from wild hosts is with food baits medicated to stop parasites. The approach has had mixed success due to factors that have been previously identified with supplemental feeding of wildlife especially competition for the bait, social dominance behavior, and the availability of alternative food sources. Given that not all of the target hosts will intake a therapeutic dose of the medication (ivermectin) at all seasons of the year, an open question is whether the approach is efficacious as a stand-alone treatment or even as part of an integrated program. As detailed in the present study an intensive effort was successful in eradicating a local outbreak of fever ticks.

Raman-based identification of tick species (Ixodidae) by spectroscopic analysis of their feces.

Ticks are blood-feeding parasites that vector a large number of pathogens of medical and veterinary importance. There are strong connections between tick and pathogen species. Timely detection of certain tick species on cattle can cease the spread of numerous devastating diseases such as Bovine babiesiosis and anaplasmosis. Detection of ticks is currently performed by slow and laborious scout-based inspection of cattle. In this study, we investigated the possibility of identification of tick species (Ixodidae) based on spectroscopic signatures of their feces. We collected Raman spectra from individual grains of feces of seven different species of ticks. Our results show that Raman spectroscopy (RS) allows for highly accurate (above 90%) differentiation between tick species. Furthermore, RS can be used to predict the tick developmental stage and differentiate between nymphs, meta-nymphs and adult ticks. We have also demonstrated that diagnostics of tick species present on cattle can be achieved using a hand-held Raman spectrometer. These findings show that RS can be used for non-invasive, non-destructive and confirmatory on-site analysis of tick species present on cattle.

Bovine fecal chemistry changes with progression of Southern Cattle Tick, Rhipicephalus (Boophilus) microplus (Acari: Ixodidae) infestation.

Surveillance for cattle fever ticks is an essential activity in the U.S. Cattle Fever Tick Eradication Program which prevents reestablishment of these tick vectors of the pathogens causing bovine babesiosis. Other methods of detecting tick infested cattle could augment current physical inspection of restrained cattle by program inspectors. The objective of this study was to determine whether a single infestation of ∼5000 Rhipicephalus (Boophilus) microplus larvae induced changes in fecal chemistry that were detectable using near-infrared reflectance spectroscopy (NIRS). Fecal samples were collected daily from 6 tick-infested and 6 non-infested Bos taurus yearling heifers. Each infested animal received ticks from one of 6 different strains of laboratory colonies of R. microplus. Date of drop and daily sum of engorged female ticks were tabulated to characterize each infestation. Cluster, common factor, principal component and MANOVA analyses were used to define and assess fecal spectra changes associated with experimental stages of infestation. Cluster analyses found no significant differences in fecal samples from each of the 6 infested heifers. Two shifts in fecal chemistry of infested animals were identified by three clusters of NIRS fecal spectra. The first cluster was comprised of samples from pre-infestation to 9 days after infestation, a period inclusive of larval tick attachment and feeding. The second cluster was comprised of samples from day 10-22 corresponding to the period of nymphal feeding, adult feeding, and early drop of engorged females. A third cluster was comprised of samples from days 23-46 corresponding to the period of engorged female drop and declining tick numbers. A Tukey-Kramer multiple comparison procedure identified significant differences in fecal spectra between five experimental stages of R. microplus infestation for principal component 1 including pre-infestation to nymphal feeding, pre-infestation to adult feeding, larval feeding to adult feeding, nymphal feeding to adult feeding and nymphal feeding to engorged female drop; for principal component 2 including pre-infestation to nymphal feeding, pre-infestation to adult feeding, and pre-infestation to engorged female drop; and for principal component 3 including pre-infestation to drop, and adult feeding to drop. These significant pair-wise comparisons reflect developmental phases of tick attachment and blood-feeding that define periods of increasing, peak and declining stress identified in two fecal chemistry shifts defined by three fecal spectra clusters. Among non-infested animals, two shifts in fecal chemistry were also detected by three fecal-spectra clusters that occurred in synchrony with those of their tick-infested counterparts. There were no significant differences in principal components or MANOVA analyses between infested and non-infested animals and the pattern of significant pair-wise Tukey-Kramer multiple comparisons for non-infested animals were similar to those of infested animals. This unintended confounding effect is attributed to the manner in which all 12 animals were preconditioned as a group, then isolated in randomly assigned blind stalls in a common barn facility for the study, creating the basis for physiological stress resonance among non-infested animals.

Phase 1 double-blind randomized safety trial of the Janus kinase inhibitor tofacitinib in systemic lupus erythematosus.

Increased risk of premature cardiovascular disease (CVD) is well recognized in systemic lupus erythematosus (SLE). Aberrant type I-Interferon (IFN)-neutrophil interactions contribute to this enhanced CVD risk. In lupus animal models, the Janus kinase (JAK) inhibitor tofacitinib improves clinical features, immune dysregulation and vascular dysfunction. We conducted a randomized, double-blind, placebo-controlled clinical trial of tofacitinib in SLE subjects (ClinicalTrials.gov NCT02535689). In this study, 30 subjects are randomized to tofacitinib (5 mg twice daily) or placebo in 2:1 block. The primary outcome of this study is safety and tolerability of tofacitinib. The secondary outcomes include clinical response and mechanistic studies. The tofacitinib is found to be safe in SLE meeting study's primary endpoint. We also show that tofacitinib improves cardiometabolic and immunologic parameters associated with the premature atherosclerosis in SLE. Tofacitinib improves high-density lipoprotein cholesterol levels (p = 0.0006, CI 95%: 4.12, 13.32) and particle number (p = 0.0008, CI 95%: 1.58, 5.33); lecithin: cholesterol acyltransferase concentration (p = 0.024, CI 95%: 1.1, -26.5), cholesterol efflux capacity (p = 0.08, CI 95%: -0.01, 0.24), improvements in arterial stiffness and endothelium-dependent vasorelaxation and decrease in type I IFN gene signature, low-density granulocytes and circulating NETs. Some of these improvements are more robust in subjects with STAT4 risk allele.

Efficacy of a water-based botanical acaricide formulation applied in portable spray box against the southern cattle tick, Rhipicephalus (Boophilus) microplus (Acari: Ixodidae), infesting cattle.

Ectoparasitism result in annual losses to livestock producers estimated to reach billions of dollars in tropical and subtropical parts of the world where the southern cattle tick, Rhipicephalus (Boophilus) microplus, is established because this invasive pest is also a vector of pathogens causing bovine babesiosis and anaplasmosis. Reintroduction of R. microplus could be economically devastating for the cattle industry in the United States. Novel technologies are necessary to manage populations of R. microplus that are resistant to multiple classes of synthetic chemicals widely used as acaricides to control ticks infesting livestock, and to mitigate the environmental impact of these synthetic acaricides. Bioassays with a water-based formulation of a commercially available botanical acaricide (Essentria® IC3) at 6.25 % against a laboratory strain of R. microplus was 100 % lethal against unfed larvae, and 94 % mortality was recorded against engorged female ticks. These results prompted documentation of efficacy on infested cattle using an acaricide delivery system mimicking field conditions, which is required to consider the use of a product by integrated tick management programs. Twelve tick naïve cattle were artificially infested with unfed larvae on days -19, -12 and -5. On day -2, ticks from the left-side of the body of each animal were manually counted. Depending on pre-treatment tick counts the animals were assigned into three separate treatment groups: i) water (untreated control); ii) coumaphos 0.3 % in water (positive control); and iii) botanical acaricide 6.25 % in water. Five days after the last infestation, cattle were doused in a spray box and moved to individual stalls to collect tick data for calculation of treatment efficacy. The percentage control, based on the reproduction of surviving engorged female ticks after treatment with the 6.25 % Essentria in water-based spray was 70 % against R. microplus. Coumaphos treatment had a mean percent control of 100 %. Whereas this application of Essentria® IC3 cannot be recommended as a stand-alone method to eradicate R. microplus, the 6.25 % botanical acaricide water-based spray could be part of integrated tick management to control populations of R. microplus resistant to organophosphates like coumaphos and other classes of commercially available synthetic acaricides.

The Moneda Bug, emChrysodarecus/em emmoneta/em Breddin = emPlacocoris/em emviridis/em Mayr (Pentatomidae: Discocephalinae: Ochlerini).

The pentatomid genus Placocoris Mayr is removed from Pentatominae and placed in Discocephalinae: Ochlerini based on the trichobothrial arrangement. Within the Ochlerini Placocoris shares characteristics with a clade composed of Adoxoplatys and allies including the rostrum arising anteriorad, abdomen with tubercle at middle base received by a notch in the metasternum, bucculae confluent posteriorly, pronotum flat, and a double row of spines on the femora. It appears to share the same host plants with Neoadoxoplatys, species of bamboo. It is further concluded that the genus Chrysodarecus Breddin is a junior synonym of Placocoris Mayr.

Pictorial dissection guide and internal anatomy of the cattle tick, Rhipicephalus (Boophilus) microplus (Canestrini).

Ticks are pests and vectors of diseases that are of public health and veterinary importance. The cattle tick, Rhipicephalus microplus (Canestrini, 1888), is one of the most studied tick species because of its impact on livestock health and production in the tropical and subtropical parts of the world, costing the cattle industry billions annually. Control methods have evolved throughout the years but so has R. microplus. Reliance upon chemical control has created a consistent need to develop new technologies to overcome the pesticide resistance that occurs as the ticks adapt. In order to utilize the more advanced tools such as RNAi or Crispr/Cas9 systems, tick tissues need to be isolated and manipulated. Unfortunately, there are a limited number of dissection guides available providing a detailed view of tick internal anatomy. This manual includes photomicrographs to guide the dissection of R. microplus adults, male and female. Topography and anatomical differences between the internal organs of unfed and gravid adult females are described. We were able to locate the crucial tissues for cattle tick physiology and lay out spatial and temporal guidelines for their identification and dissection. Examples of how this information can be used at the nexus between organismal and molecular research to innovate tick control technologies is discussed.

Molecular dynamic simulations of diacridine binding to DNA: Indications that C6 diacridine can bisintercalate spanning two base pairs.

Dimers of 9-aminoacridine linked via the 9-amino group with polymethylene chains, termed diacridines, are known to bisintercalate into DNA when the linker comprises 6 or more methylene units. There are no literature reports of crystal or NMR solution structures for bisintercalated diacridine-DNA complexes, and the issue of the structure of the C6 ([CH2 ]n linker where n = 6) diacridine complex remains unresolved. Previously, based on simple geometric considerations, it was proposed that C6 diacridine could only span a single base pair, which requires that its bifunctional reaction violates the widely-observed "neighbor exclusion principle" where bound intercalators are separated by at least 2 base pairs. Here we have explored the structure of diacridine-DNA complexes using unrestrained molecular dynamics in explicit solvent using the parmbsc0 forcefield in AMBER14. We studied the C4 to C8 dimers, intercalated via both the minor and major DNA grooves, to a variety of nucleotide sequences. We find that C6, C7, and C8 diacridine are able to form 2 base pair bisintercalated complexes from either groove, whereas the C4 and C5 homologues cannot. We conclude that C6 diacridine does have the capacity to bisintercalate without violating neighbor exclusion, and that the previous proposed binding model needs revision.

Consensus Guidelines for Evaluation and Management of Pulmonary Disease in Sjögren's.

BACKGROUND: Pulmonary disease is a potentially serious yet underdiagnosed complication of Sjögren's syndrome, the second most common autoimmune rheumatic disease. Approximately 16% of patients with Sjögren's demonstrate pulmonary involvement with higher mortality and lower quality of life. RESEARCH QUESTION: Clinical practice guidelines for pulmonary manifestations of Sjögren's were developed by the Sjögren's Foundation after identifying a critical need for early diagnosis and improved quality and consistency of care. STUDY DESIGN AND METHODS: A rigorous and transparent methodology was followed according to American College of Rheumatology guidelines. The Pulmonary Topic Review Group (TRG) developed clinical questions in the PICO (Patient, Intervention, Comparison, Outcome) format and selected literature search parameters. Each article was reviewed by a minimum of two TRG members for eligibility and assessment of quality of evidence and strength of recommendation. Guidelines were then drafted based on available evidence, expert opinion, and clinical importance. Draft recommendations with a clinical rationale and data extraction tables were submitted to a Consensus Expert Panel for consideration and approval, with at least 75% agreement required for individual recommendations to be included in the final version. RESULTS: The literature search revealed 1,192 articles, of which 150 qualified for consideration in guideline development. Of the original 85 PICO questions posed by the TRG, 52 recommendations were generated. These were then reviewed by the Consensus Expert Panel and 52 recommendations were finalized, with a mean agreement of 97.71% (range, 79%-100%). The recommendations span topics of evaluating Sjögren's patients for pulmonary manifestations and assessing, managing, and treating upper and lower airway disease, interstitial lung disease, and lymphoproliferative disease. INTERPRETATION: Clinical practice guidelines for pulmonary manifestations in Sjögren's will improve early identification, evaluation, and uniformity of care by primary care physicians, rheumatologists, and pulmonologists. Additionally, opportunities for future research are identified.