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1.
FEBS Lett ; 2024 Oct 07.
Artículo en Inglés | MEDLINE | ID: mdl-39375189

RESUMEN

Since 2003, FEBS Letters has awarded an annual prize to the corresponding author of the best research paper published in the journal in the previous calendar year. The award-winning article is selected by a special committee formed by appointed members of the Editorial Board, plus one external member. The winner of the 2024 FEBS Letters Award is Professor Rachel Flynn of Boston University Chobanian & Avedisian School of Medicine, for the outstanding paper "The exoribonuclease XRN2 mediates degradation of the long non-coding telomeric RNA TERRA." In this interview, Rachel Flynn talks about her award-winning research.

2.
FEBS Lett ; 598(18): 2227-2239, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39279609

RESUMEN

Although publication in scholarly peer-reviewed journals remains the gold standard for communication of findings in the life sciences, the gold has been debased in the digital age by various impurities, including (a) reviewer fatigue, (b) fraud, paper mills, and the perils of artificial intelligence, (c) predatory journals, (d) the ongoing use of journal impact factor as a proxy for individual article quality, and (e) salami-slicing and other unethical practices. In this article, I present a detailed overview of these problems, as well as solutions proposed and implemented to counter them. Finally, I suggest that these are all symptomatic of a wider problem, namely the culture of 'publish or perish' and ongoing issues with how researcher performance is evaluated for grant, hiring, and promotion decisions. Only by working towards a global shift in the way scientists view the purpose of publication can we finally remove the impurities and refine the gold.


Asunto(s)
Disciplinas de las Ciencias Biológicas , Edición , Humanos , Factor de Impacto de la Revista , Revisión de la Investigación por Pares/ética , Publicaciones Periódicas como Asunto
3.
FEBS Open Bio ; 14(1): 4-7, 2024 01.
Artículo en Inglés | MEDLINE | ID: mdl-38168511

RESUMEN

FEBS Open Bio is committed to not only publishing sound science but also to supporting early-career researchers and the scientific community as a whole. In this editorial, we look back at how the journal recognised and rewarded excellent research in 2023 and look forward to 2024.


Asunto(s)
Edición , Investigadores , Humanos
4.
FEBS Open Bio ; 13(7): 1138-1139, 2023 07.
Artículo en Inglés | MEDLINE | ID: mdl-37394995

RESUMEN

The Federation of European Biochemical Societies (FEBS) awarded FEBS Long-Term Fellowships from 1979 until 2020, at which time the scheme was replaced with the FEBS Excellence Award. Over four decades, FEBS awarded a huge number of Long-Term Fellowships, helping to support and promote the careers of excellent young researchers across Europe. To celebrate the exciting work performed by the FEBS Long-Term Fellows, we present here a special 'In the Limelight' issue of FEBS Open Bio, containing four Mini-reviews and four Research Protocols authored by the fellows themselves. The four Review articles provide timely updates on the respective research fields, while the Research Protocols describe how to perform challenging experimental methods in detail. We hope this issue will be a valuable resource for the community, and a celebration of the high-quality work done by young scientists.


Asunto(s)
Becas , Investigadores , Humanos , Europa (Continente)
5.
FEBS Open Bio ; 13(1): 4-9, 2023 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-36594366

RESUMEN

FEBS Open Bio is constantly evolving to best suit the needs of the scientific community. In this Editorial, we review the various new initiatives introduced in 2022 and look forward to the opportunities and challenges that lie ahead in 2023.

6.
FEBS Open Bio ; 12(12): 2100-2101, 2022 12.
Artículo en Inglés | MEDLINE | ID: mdl-36453943

RESUMEN

FEBS Open Bio and our fellow FEBS Press journals have a strong commitment to maintaining the integrity of the scientific literature. The life sciences, in particular, are suffering from an ongoing reproducibility crisis, and this may in part be fuelled by mistakes, manipulation or outright fabrication of the presented data. We were recently made aware of several articles published in FEBS Open Bio that appear to contain full or partial duplications of images from other published articles in a different scientific context. In most of these cases, the duplications were taken from previously published papers. After thorough investigation and subsequent discussion within FEBS Press and with Wiley's Integrity in Publishing Group, we have retracted most of these articles.


Asunto(s)
Reproducibilidad de los Resultados
7.
FEBS Open Bio ; 12(3): 554-559, 2022 03.
Artículo en Inglés | MEDLINE | ID: mdl-35090097

RESUMEN

Laszlo Nagy has been on the Editorial Board of FEBS Open Bio since the journal's inception and is a passionate supporter of FEBS Press and other society journals. Currently, he is also an editor of FEBS Letters and The Journal of Clinical Investigation (JCI). He studied medicine at the University Medical School of Debrecen in Hungary, where he graduated with an M.D. and later Ph.D., and then moved to the United States to conduct postdoctoral research at the University of Texas-Houston and subsequently the Salk Institute in San Diego. Laszlo is a Professor of Medicine and Biological Chemistry at John Hopkins School of Medicine, where he is Co-Director of the Institute for Fundamental Biomedical Research and Associate Director of the Center for Metabolic Origins of Disease, and Adjunct Professor at the University of Debrecen. Formerly, he was a Professor and Founding Director of the Genomic Control of Metabolism Program at the Sanford Burnham Prebys Medical Discovery Institute. He is also a member of the European Molecular Biology Organisation (EMBO), Academia Europaea, the Hungarian Academy of Sciences and The Henry Kunkel Society, and recipient of several awards, including the Boehringer Ingelheim Research Award, Cheryl Whitlock/Pathology Prize, a Wellcome Trust Senior Research Fellowship in Biomedical Sciences, and three Howard Hughes Medical Institute International Research Scholar Awards. In this fascinating interview, Laszlo Nagy shares the advice that changed his career trajectory, relates his views on scientific publishing, discusses new developments at The Johns Hopkins Center for Metabolic Origins of Disease, and outlines the prospects for future development of research and technology infrastructures in eastern Europe.


Asunto(s)
Investigación Biomédica , Investigación Biomédica/historia , Humanos , Estados Unidos , Universidades
8.
FEBS Open Bio ; 12(1): 4-8, 2022 01.
Artículo en Inglés | MEDLINE | ID: mdl-34927398

RESUMEN

FEBS Open Bio continues to go from strength to strength, with 2021 perhaps marking its most exciting year. In this Editorial, the Editor-in-Chief Miguel A. De la Rosa looks back at all the new developments of 2021 and forecasts the outlook for 2022.

9.
FEBS Open Bio ; 11(12): 3183-3188, 2021 12.
Artículo en Inglés | MEDLINE | ID: mdl-34851554

RESUMEN

In celebration of the 10th anniversary of FEBS Open Bio, we spoke to some of the key figures of the journal's genesis, development, and its future direction, and recount here their thoughts and experiences. Prof. Félix. Goñi discusses the role of the FEBS Publication Committee in the journal's beginnings, Dr Mary Purton relates her experiences as the journal's Executive Editor, Prof. László Fésüs explains how the journal developed during his tenure as Chair of the Publication Committee, and Prof. Johannes Buchner looks forward to the future of FEBS Press and academic publishing. Finally, Prof. John (Iain) Mowbray describes his "Friday afternoon thought" to start a new journal.


Asunto(s)
Publicación de Acceso Abierto/historia , Publicación de Acceso Abierto/tendencias , Historia del Siglo XXI , Humanos
10.
FEBS Open Bio ; 11(12): 3176-3182, 2021 12.
Artículo en Inglés | MEDLINE | ID: mdl-34786884

RESUMEN

This month, FEBS Open Bio celebrates its 10th birthday. To celebrate the journal's first decade, we present this special anniversary issue, comprised of editorials, reviews, and research articles especially commissioned for the occasion. In this introductory editorial, we invite the reader to join us as we reminisce over the journal's past, celebrate its present, and look forward to its future.


Asunto(s)
Publicación de Acceso Abierto/historia , Publicación de Acceso Abierto/tendencias , Historia del Siglo XXI , Humanos
11.
Epigenetics ; 10(2): 122-6, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-25603102

RESUMEN

The reversible ubiquitylation of histone H2B has long been known to regulate gene transcription, and is now understood to modulate DNA replication as well. In this review, we describe how recent, genome-wide analyses have demonstrated that this histone mark has further reaching effects on transcription and replication than once thought. We also consider the ongoing efforts to elucidate the molecular mechanisms by which H2B ubiquitylation affects processes on the DNA template, and outline the various hypothetical scenarios.


Asunto(s)
Replicación del ADN , ADN/metabolismo , Histonas/metabolismo , Transcripción Genética , Ubiquitinación , Humanos
12.
PLoS One ; 6(7): e22209, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-21829450

RESUMEN

Telomeric heterochromatin assembly in budding yeast propagates through the association of Silent Information Regulator (SIR) proteins with nucleosomes, and the nucleosome array has been assumed to fold into a compacted structure. It is believed that the level of compaction and gene repression within heterochromatic regions can be modulated by histone modifications, such as acetylation of H3 lysine 56 and H4 lysine 16, and monoubiquitylation of H2B lysine 123. However, it remains unclear as to whether or not gene silencing is a direct consequence of the compaction of chromatin. Here, by investigating the role of the carboxy-terminus of histone H2B in heterochromatin formation, we identify that the disorderly compaction of chromatin induced by a mutation at H2B T122 specifically hinders telomeric heterochromatin formation. H2B T122 is positioned within the highly conserved AVTKY motif of the αC helix of H2B. Heterochromatin containing the T122E substitution in H2B remains inaccessible to ectopic dam methylase with dramatically increased mobility in sucrose gradients, indicating a compacted chromatin structure. Genetic studies indicate that this unique phenotype is independent of H2B K123 ubiquitylation and Sir4. In addition, using ChIP analysis, we demonstrate that telomere structure in the mutant is further disrupted by a defect in Sir2/Sir3 binding and the resulting invasion of euchromatic histone marks. Thus, we have revealed that the compaction of chromatin per se is not sufficient for heterochromatin formation. Instead, these results suggest that an appropriately arrayed chromatin mediated by H2B C-terminus is required for SIR binding and the subsequent formation of telomeric chromatin in yeast, thereby identifying an intrinsic property of the nucleosome that is required for the establishment of telomeric heterochromatin. This requirement is also likely to exist in higher eukaryotes, as the AVTKY motif of H2B is evolutionarily conserved.


Asunto(s)
Ensamble y Desensamble de Cromatina , Histonas/metabolismo , Lisina/metabolismo , Proteínas Reguladoras de Información Silente de Saccharomyces cerevisiae/metabolismo , Telómero/fisiología , Ubiquitina/metabolismo , Acetilación , Biomarcadores/metabolismo , Western Blotting , Inmunoprecipitación de Cromatina , Técnica del Anticuerpo Fluorescente , Perfilación de la Expresión Génica , Heterocromatina/genética , Histonas/química , Lisina/química , Nucleosomas/genética , Análisis de Secuencia por Matrices de Oligonucleótidos , ARN de Hongos/genética , ARN Mensajero/genética , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/crecimiento & desarrollo , Saccharomyces cerevisiae/metabolismo , Proteínas Reguladoras de Información Silente de Saccharomyces cerevisiae/genética , Ubiquitinación
13.
J Neurophysiol ; 102(3): 1994-2006, 2009 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-19625535

RESUMEN

Diversity in neuronal signaling is a product not only of differential gene expression, but also of alternative splicing. However, although recognized, the precise contribution of alternative splicing in ion channel transcripts to channel kinetics remains poorly understood. Invertebrates, with their smaller genomes, offer attractive models to examine the contribution of splicing to neuronal function. In this study we report the sequencing and biophysical characterization of alternative splice variants of the sole voltage-gated Na+ gene (DmNav, paralytic), in late-stage embryos of Drosophila melanogaster. We identify 27 unique splice variants, based on the presence of 15 alternative exons. Heterologous expression, in Xenopus oocytes, shows that alternative exons j, e, and f primarily influence activation kinetics: when present, exon f confers a hyperpolarizing shift in half-activation voltage (V1/2), whereas j and e result in a depolarizing shift. The presence of exon h is sufficient to produce a depolarizing shift in the V1/2 of steady-state inactivation. The magnitude of the persistent Na+ current, but not the fast-inactivating current, in both oocytes and Drosophila motoneurons in vivo is directly influenced by the presence of either one of a pair of mutually exclusive, membrane-spanning exons, termed k and L. Transcripts containing k have significantly smaller persistent currents compared with those containing L. Finally, we show that transcripts lacking all cytoplasmic alternatively spliced exons still produce functional channels, indicating that splicing may influence channel kinetics not only through change to protein structure, but also by allowing differential modification (i.e., phosphorylation, binding of cofactors, etc.). Our results provide a functional basis for understanding how alternative splicing of a voltage-gated Na+ channel results in diversity in neuronal signaling.


Asunto(s)
Empalme Alternativo/genética , Regulación del Desarrollo de la Expresión Génica/genética , Activación del Canal Iónico/genética , Canales de Sodio/genética , Animales , Fenómenos Biofísicos/fisiología , Clonación Molecular , Drosophila melanogaster , Estimulación Eléctrica/métodos , Embrión no Mamífero , Exones/fisiología , Proteínas Fluorescentes Verdes/genética , Potenciales de la Membrana/genética , Datos de Secuencia Molecular , Oocitos , Canales de Sodio/fisiología , Transfección/métodos , Xenopus
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