Visualization of differential gene expression using a novel method of RNA fingerprinting based on AFLP: analysis of gene expression during potato tuber development.

Using a highly synchronous in vitro tuberization system, in combination with an amplified restriction fragment polymorphism (AFLP)-derived technique for RNA fingerprinting (cDNA-AFLP), transcriptional changes at and around the time point of potato tuberization have been analyzed. The targeted expression analysis of a specific transcript coding for the major potato storage protein, patatin and a second transcript, coding for ADP-glucose pyrophosphorylase, a key gene in the starch biosynthetic pathway is described. This paper confirms that kinetics of expression revealed by cDNA-AFLP analysis are comparable to those found in Northern analysis. Furthermore, this paper reports the isolation and analysis of two tuber-specific transcript-derived fragments (TDFs) coding for the lipoxygenase enzyme, which are differentially induced around the time point of tuber formation. Analysis of the two lox TDFs demonstrates that it is possible to dissect the expression modalities of individual transcripts, not independently detectable by Northern analysis. Finally, it is shown that using cDNA-AFLP, rapid and simple verification of band identity may be achieved. The results indicate that cDNA-AFLP is a broadly applicable technology for identifying developmentally regulated genes.

Abscisic acid and assimilate partitioning to developing seeds. II. Does abscisic acid influence the sink strength of Arabidopsis seeds?

The role of abscisic acid (ABA) in the regulation of transport of assimilates to seeds was investigated with the aid of Arabidopsis thaliana mutants that were ABA-deficient and/or insensitive to ABA. Subsequent flowers of mutant mother plants were alternately pollinated with pollen from either wild-type or mutant plants, and the transport of radiolabelled photoassimilates to the genetically different seeds was studied. The experiments were performed under conditions of reduced availability of source material, achieved either by reduced light quantity or by combining the ABA-deficient mutant with a starchless mutant. No effect of the genotype on the import rate of assimilates was detected, indicating that endogenous ABA does not influence the sink strength of Arabidopsis seeds. Reports describing contrary results are discussed.