Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 16.856
Filtrar
1.
Water Environ Res ; 96(6): e11056, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38825347

RESUMEN

Nitrate poses a potential threat to aquatic ecosystems. This study focuses on the sulfur autotrophic denitrification mechanism in the process of water culture wastewater treatment, which has been successfully applied to the degradation of nitrogen in water culture farm effluents. However, the coexistence of organic acids in the treatment process is a common environmental challenge, significantly affecting the activity of denitrifying bacteria. This paper aims to explore the effects of adding benzoic acid and lactic acid on denitrification performance, organic acid removal rate, and microbial population abundance in sulfur autotrophic denitrification systems under optimal operating conditions, sulfur deficiency, and high hydraulic load. In experiments with 50 mg·L-1 of benzoic acid or lactic acid alone, the results show that benzoic acid and lactic acid have a stimulating effect on denitrification activity, with the stimulating effect significantly greater than the inhibitory effect. Under optimal operating conditions, the average denitrification rate of the system remained above 99%; under S/N = 1.5 conditions, the average denitrification rate increased from 88.34% to 91.93% and 85.91%; under HRT = 6 h conditions, the average denitrification rate increased from 75.25% to 97.79% and 96.58%. In addition, the addition of organic acids led to a decrease in microbial population abundance. At the phylum level, Proteobacteria has always been the dominant bacterial genus, and its relative abundance significantly increased after the addition of benzoic acid, from 40.2% to 61.5% and 62.4%. At the genus level, Thiobacillus, Sulfurimonas, Chryseobacterium, and Thermomonas maintained high population abundances under different conditions. PRACTITIONER POINTS: Employing autotrophic denitrification process for treating high-nitrate wastewater. Utilizing organic acids as external carbon sources. Denitrifying bacteria demonstrate high utilization efficiency towards organic acids. Organic acids promote denitrification more than they inhibit it. The promotion is manifested in the enhancement of activity and microbial abundance.


Asunto(s)
Procesos Autotróficos , Ácido Benzoico , Desnitrificación , Ácido Láctico , Azufre , Ácido Benzoico/metabolismo , Azufre/metabolismo , Ácido Láctico/metabolismo , Bacterias/metabolismo , Bacterias/clasificación , Microbiota/efectos de los fármacos , Eliminación de Residuos Líquidos/métodos , Purificación del Agua/métodos
2.
Environ Microbiol Rep ; 16(3): e13263, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38705733

RESUMEN

Deep-sea methane seeps are amongst the most biologically productive environments on Earth and are often characterised by stable, low oxygen concentrations and microbial communities that couple the anaerobic oxidation of methane to sulfate reduction or iron reduction in the underlying sediment. At these sites, ferrous iron (Fe2+) can be produced by organoclastic iron reduction, methanotrophic-coupled iron reduction, or through the abiotic reduction by sulfide produced by the abundant sulfate-reducing bacteria at these sites. The prevalence of Fe2+in the anoxic sediments, as well as the availability of oxygen in the overlying water, suggests that seeps could also harbour communities of iron-oxidising microbes. However, it is unclear to what extent Fe2+ remains bioavailable and in solution given that the abiotic reaction between sulfide and ferrous iron is often assumed to scavenge all ferrous iron as insoluble iron sulfides and pyrite. Accordingly, we searched the sea floor at methane seeps along the Cascadia Margin for microaerobic, neutrophilic iron-oxidising bacteria, operating under the reasoning that if iron-oxidising bacteria could be isolated from these environments, it could indicate that porewater Fe2+ can persist is long enough for biology to outcompete pyritisation. We found that the presence of sulfate in our enrichment media muted any obvious microbially-driven iron oxidation with most iron being precipitated as iron sulfides. Transfer of enrichment cultures to sulfate-depleted media led to dynamic iron redox cycling relative to abiotic controls and sulfate-containing cultures, and demonstrated the capacity for biogenic iron (oxyhydr)oxides from a methane seep-derived community. 16S rRNA analyses revealed that removing sulfate drastically reduced the diversity of enrichment cultures and caused a general shift from a Gammaproteobacteria-domainated ecosystem to one dominated by Rhodobacteraceae (Alphaproteobacteria). Our data suggest that, in most cases, sulfur cycling may restrict the biological "ferrous wheel" in contemporary environments through a combination of the sulfur-adapted sediment-dwelling ecosystems and the abiotic reactions they influence.


Asunto(s)
Bacterias , Sedimentos Geológicos , Hierro , Metano , Oxidación-Reducción , Azufre , Metano/metabolismo , Hierro/metabolismo , Azufre/metabolismo , Sedimentos Geológicos/microbiología , Sedimentos Geológicos/química , Bacterias/metabolismo , Bacterias/genética , Bacterias/clasificación , Agua de Mar/microbiología , Agua de Mar/química , Sulfuros/metabolismo , Sulfatos/metabolismo , ARN Ribosómico 16S/genética , Filogenia
3.
Water Res ; 257: 121700, 2024 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-38705068

RESUMEN

Sulfur-based denitrification is a promising technology in treatments of nitrate-contaminated wastewaters. However, due to weak bioavailability and electron-donating capability of elemental sulfur, its sulfur-to-nitrate ratio has long been low, limiting the support for dissimilatory nitrate reduction to ammonium (DNRA) process. Using a long-term sulfur-packed reactor, we demonstrate here for the first time that DNRA in sulfur-based system is not negligible, but rather contributes a remarkable 40.5 %-61.1 % of the total nitrate biotransformation for ammonium production. Through combination of kinetic experiments, electron flow analysis, 16S rRNA amplicon, and microbial network succession, we unveil a cryptic in-situ sulfur disproportionation (SDP) process which significantly facilitates DNRA via enhancing mass transfer and multiplying 86.7-210.9 % of bioavailable electrons. Metagenome assembly and single-copy gene phylogenetic analysis elucidate the abundant genomes, including uc_VadinHA17, PHOS-HE36, JALNZU01, Thiobacillus, and Rubrivivax, harboring complete genes for ammonification. Notably, a unique group of self-SDP-coupled DNRA microorganism was identified. This study unravels a previously concealed fate of DNRA, which highlights the tremendous potential for ammonium recovery and greenhouse gas mitigation. Discovery of a new coupling between nitrogen and sulfur cycles underscores great revision needs of sulfur-driven denitrification technology.


Asunto(s)
Compuestos de Amonio , Nitratos , Nitrógeno , Azufre , Azufre/metabolismo , Compuestos de Amonio/metabolismo , Nitratos/metabolismo , Nitrógeno/metabolismo , Desnitrificación , Reactores Biológicos , Aguas Residuales , Oxidación-Reducción , Filogenia , ARN Ribosómico 16S/genética
4.
Water Res ; 257: 121695, 2024 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-38723352

RESUMEN

Wolframite (FeWO4), a typical polyoxometalate, serves as an auspicious candidate for heterogeneous catalysts, courtesy of its high chemical stability and electronic properties. However, the electron-deficient surface-active Fe species in FeWO4 are insufficient to cleave H2O2 via Fe redox-mediated Fenton-like catalytic reaction. Herein, we doped Sulfur (S) atom into FeWO4 catalysts to refine the electronic structure of FeWO4 for H2O2 activation and sulfamethoxazole (SMX) degradation. Furthermore, spin-state reconstruction on S-doped FeWO4 was found to effectively refine the electronic structure of Fe in the d orbital, thereby enhancing H2O2 activation. S doping also accelerated electron transfer during the conversion of sulfur species, promoting the cycling of Fe(III) to Fe(II). Consequently, S-doped FeWO4 bolstered the Fenton-like reaction by nearly two orders of magnitude compared to FeWO4. Significantly, the developed S-doped FeWO4 exhibited a remarkable removal efficiency of approximately 100% for SMX within 40 min in real water samples. This underscores its extensive pH adaptability, robust catalytic stability, and leaching resistance. The matrix effects of water constituents on the performance of S-doped FeWO4 were also investigated, and the results showed that a certain amount of Cl-, SO42-, NO3-, HCO3- and PO43- exhibited negligible effects on the degradation of SMX. Theoretical calculations corroborate that the distinctive spin-state reconstruction of Fe center in S-doped FeWO4 is advantageous for H2O2 decomposition. This discovery offers novel mechanistic insight into the enhanced catalytic activity of S doping in Fenton-like reactions and paves the way for expanding the application of FeWO4 in wastewater treatment.


Asunto(s)
Azufre , Contaminantes Químicos del Agua , Azufre/química , Contaminantes Químicos del Agua/química , Compuestos de Tungsteno/química , Peróxido de Hidrógeno/química , Catálisis , Purificación del Agua/métodos , Oxidación-Reducción , Hierro/química
5.
Nat Commun ; 15(1): 4066, 2024 May 14.
Artículo en Inglés | MEDLINE | ID: mdl-38744885

RESUMEN

Terrestrial geothermal springs are physicochemically diverse and host abundant populations of Archaea. However, the diversity, functionality, and geological influences of these Archaea are not well understood. Here we explore the genomic diversity of Archaea in 152 metagenomes from 48 geothermal springs in Tengchong, China, collected from 2016 to 2021. Our dataset is comprised of 2949 archaeal metagenome-assembled genomes spanning 12 phyla and 392 newly identified species, which increases the known species diversity of Archaea by ~48.6%. The structures and potential functions of the archaeal communities are strongly influenced by temperature and pH, with high-temperature acidic and alkaline springs favoring archaeal abundance over Bacteria. Genome-resolved metagenomics and metatranscriptomics provide insights into the potential ecological niches of these Archaea and their potential roles in carbon, sulfur, nitrogen, and hydrogen metabolism. Furthermore, our findings illustrate the interplay of competition and cooperation among Archaea in biogeochemical cycles, possibly arising from overlapping functional niches and metabolic handoffs. Taken together, our study expands the genomic diversity of Archaea inhabiting geothermal springs and provides a foundation for more incisive study of biogeochemical processes mediated by Archaea in geothermal ecosystems.


Asunto(s)
Archaea , Genoma Arqueal , Manantiales de Aguas Termales , Metagenoma , Metagenómica , Filogenia , Manantiales de Aguas Termales/microbiología , Archaea/genética , Archaea/clasificación , China , Metagenómica/métodos , Biodiversidad , Concentración de Iones de Hidrógeno , Azufre/metabolismo , Temperatura , Ecosistema
6.
Respir Res ; 25(1): 206, 2024 May 14.
Artículo en Inglés | MEDLINE | ID: mdl-38745285

RESUMEN

BACKGROUND: Previous studies have largely neglected the role of sulfur metabolism in LUAD, and no study has combine iron, copper, and sulfur-metabolism associated genes together to create prognostic signatures. METHODS: This study encompasses 1564 LUAD patients, 1249 NSCLC patients, and over 10,000 patients with various cancer types from diverse cohorts. We employed the R package ConsensusClusterPlus to separate patients into different ICSM (Iron, Copper, and Sulfur-Metabolism) subtypes. Various machine-learning methods were utilized to develop the ICSMI. Enrichment analyses were conducted using ClusterProfiler and GSVA, while IOBR quantified immune cell infiltration. GISTIC2.0 and maftools were utilized for CNV and SNV data analysis. The Oncopredict package predicted drug information based on GDSC1. TIDE algorithm and cohorts GSE91061 and IMvigor210 evaluated patient response to immunotherapy. Single-cell data was processed using the Seurat package, AUCell package calculated cells geneset activity scores, and the Scissor algorithm identified ICSMI-associated cells. In vitro experiments was conducted to explore the role of ICSMRGs in LUAD. RESULTS: Unsupervised clustering identified two distinct ICSM subtypes of LUAD, each with unique clinical characteristics. The ICSMI, comprising 10 genes, was constructed using integrated machine-learning methods. Its prognostic power was validated in 10 independent datasets, revealing that LUAD patients with higher ICSMI levels had poorer prognoses. Furthermore, ICSMI demonstrated superior predictive abilities compared to 102 previously published signatures. A nomogram incorporating ICSMI and clinical features exhibited high predictive performance. ICSMI positively correlated with patients gene mutations, and integrated analysis of bulk and single-cell transcriptome data revealed its association with TME modulators. Cells representing the high-ICSMI phenotype exhibited more malignant features. LUAD patients with high ICSMI levels exhibited sensitivity to chemotherapy and targeted therapy but displayed resistance to immunotherapy. In a comprehensive analysis across various cancers, ICSMI retained significant prognostic value and emerged as a risk factor for the majority of cancer patients. CONCLUSIONS: ICSMI provides critical prognostic insights for LUAD patients, offering valuable insights into the tumor microenvironment and predicting treatment responsiveness.


Asunto(s)
Adenocarcinoma del Pulmón , Cobre , Hierro , Neoplasias Pulmonares , Aprendizaje Automático , Azufre , Humanos , Neoplasias Pulmonares/metabolismo , Neoplasias Pulmonares/genética , Neoplasias Pulmonares/patología , Neoplasias Pulmonares/diagnóstico , Azufre/metabolismo , Cobre/metabolismo , Pronóstico , Adenocarcinoma del Pulmón/genética , Adenocarcinoma del Pulmón/metabolismo , Adenocarcinoma del Pulmón/diagnóstico , Adenocarcinoma del Pulmón/patología , Adenocarcinoma del Pulmón/tratamiento farmacológico , Hierro/metabolismo , Resultado del Tratamiento , Biomarcadores de Tumor/genética , Biomarcadores de Tumor/metabolismo , Valor Predictivo de las Pruebas , Masculino , Femenino
7.
Protein Sci ; 33(6): e5014, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38747384

RESUMEN

A heterodisulfide reductase-like complex (sHdr) and novel lipoate-binding proteins (LbpAs) are central players of a wide-spread pathway of dissimilatory sulfur oxidation. Bioinformatic analysis demonstrate that the cytoplasmic sHdr-LbpA systems are always accompanied by sets of sulfur transferases (DsrE proteins, TusA, and rhodaneses). The exact composition of these sets may vary depending on the organism and sHdr system type. To enable generalizations, we studied model sulfur oxidizers from distant bacterial phyla, that is, Aquificota and Pseudomonadota. DsrE3C of the chemoorganotrophic Alphaproteobacterium Hyphomicrobium denitrificans and DsrE3B from the Gammaproteobacteria Thioalkalivibrio sp. K90mix, an obligate chemolithotroph, and Thiorhodospira sibirica, an obligate photolithotroph, are homotrimers that donate sulfur to TusA. Additionally, the hyphomicrobial rhodanese-like protein Rhd442 exchanges sulfur with both TusA and DsrE3C. The latter is essential for sulfur oxidation in Hm. denitrificans. TusA from Aquifex aeolicus (AqTusA) interacts physiologically with AqDsrE, AqLbpA, and AqsHdr proteins. This is particularly significant as it establishes a direct link between sulfur transferases and the sHdr-LbpA complex that oxidizes sulfane sulfur to sulfite. In vivo, it is unlikely that there is a strict unidirectional transfer between the sulfur-binding enzymes studied. Rather, the sulfur transferases form a network, each with a pool of bound sulfur. Sulfur flux can then be shifted in one direction or the other depending on metabolic requirements. A single pair of sulfur-binding proteins with a preferred transfer direction, such as a DsrE3-type protein towards TusA, may be sufficient to push sulfur into the sink where it is further metabolized or needed.


Asunto(s)
Proteínas Bacterianas , Oxidación-Reducción , Oxidorreductasas , Azufre , Sulfurtransferasas , Azufre/metabolismo , Sulfurtransferasas/metabolismo , Sulfurtransferasas/química , Sulfurtransferasas/genética , Oxidorreductasas/metabolismo , Oxidorreductasas/química , Proteínas Bacterianas/metabolismo , Proteínas Bacterianas/química , Proteínas Bacterianas/genética
8.
Sci Rep ; 14(1): 11734, 2024 05 22.
Artículo en Inglés | MEDLINE | ID: mdl-38777815

RESUMEN

Heavy metal (HM) pollution threatens human and ecosystem health. Current methods for remediating water contaminated with HMs are expensive and have limited effect. Therefore, bioremediation is being investigated as an environmentally and economically viable alternative. Freshwater protists Euglena gracilis and Euglena mutabilis were investigated for their tolerance to cadmium (Cd). A greater increase in cell numbers under Cd stress was noted for E. mutabilis but only E. gracilis showed an increase in Cd tolerance following pre-treatment with elevated concentrations of S or N. To gain insight regarding the nature of the increased tolerance RNA-sequencing was carried out on E. gracilis. This revealed transcript level changes among pretreated cells, and additional differences among cells exposed to CdCl2. Gene ontology (GO) enrichment analysis reflected changes in S and N metabolism, transmembrane transport, stress response, and physiological processes related to metal binding. Identifying these changes enhances our understanding of how these organisms adapt to HM polluted environments and allows us to target development of future pre-treatments to enhance the use of E. gracilis in bioremediation relating to heavy metals.


Asunto(s)
Cadmio , Nitrógeno , Azufre , Cadmio/toxicidad , Azufre/metabolismo , Azufre/farmacología , Nitrógeno/metabolismo , Biodegradación Ambiental , Euglena/metabolismo , Euglena/efectos de los fármacos , Euglena/genética , Contaminantes Químicos del Agua/toxicidad , Euglena gracilis/metabolismo , Euglena gracilis/efectos de los fármacos , Euglena gracilis/genética
9.
Ecotoxicol Environ Saf ; 278: 116396, 2024 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-38696872

RESUMEN

The success of the sodic soil reclamation using elemental S (S°) depends on the population of the native S° oxidizers. Augmenting the native flora of the sodic soils with effective S° oxidizers can enhance the success of the sodic soil reclamation. Present study reports for the first time the S° oxidation potential of the Sphingomonas olei strain 20UP7 isolated from sodic soils with pHs 9.8 and ECe 3.6 dS m-1. Inoculation with S. olei strain 20UP7 caused 13.0-24.2 % increase in S° oxidation in different sodic soils (pHs 9.1-10.5). It improved the concentration of the Ca2+, Mg2+, PO43- and declined the HCO3- and total alkalinity of the soil solution. This isolate also showed appreciable P and Zn solubilization, indole acetic acid, ammonia, and titratable acidity production in the growth media. It tended to the formation of biofilm around sulphur particles. The PCR amplification with gene-specific primers showed the occurrence of soxA, soxB, and soxY genes with a single band corresponding to length of 850, 460, and 360 base pairs, respectively. The integration of the S. olei strain 20UP7 with S° caused 21.7-25.4 % increase in the rice and wheat yield compared to the soil treated with S° alone. This study concludes that the S. olei, native to high saline-sodic soils can be utilized for improving the sodicity reclamation and plant growth promotion using elemental S based formulations.


Asunto(s)
Oxidación-Reducción , Microbiología del Suelo , Suelo , Suelo/química , Azufre/metabolismo , Sphingomonas , Concentración de Iones de Hidrógeno , Biopelículas/crecimiento & desarrollo , Desarrollo de la Planta/efectos de los fármacos , Ácidos Indolacéticos/metabolismo , Oryza/microbiología , Oryza/crecimiento & desarrollo , Contaminantes del Suelo
10.
Sci Rep ; 14(1): 11583, 2024 05 21.
Artículo en Inglés | MEDLINE | ID: mdl-38773106

RESUMEN

The present investigation explores the efficacy of green algae Ulva lactuca biochar-sulfur (GABS) modified with H2SO4 and NaHCO3 in adsorbing methylene blue (MB) dye from aqueous solutions. The impact of solution pH, contact duration, GABS dosage, and initial MB dye concentration on the adsorption process are all methodically investigated in this work. To obtain a thorough understanding of the adsorption dynamics, the study makes use of several kinetic models, including pseudo-first order and pseudo-second order models, in addition to isotherm models like Langmuir, Freundlich, Tempkin, and Dubinin-Radushkevich. The findings of the study reveal that the adsorption capacity at equilibrium (qe) reaches 303.78 mg/g for a GABS dose of 0.5 g/L and an initial MB dye concentration of 200 mg/L. Notably, the Langmuir isotherm model consistently fits the experimental data across different GABS doses, suggesting homogeneous adsorption onto a monolayer surface. The potential of GABS as an efficient adsorbent for the extraction of MB dye from aqueous solutions is highlighted by this discovery. The study's use of kinetic and isotherm models provides a robust framework for understanding the intricacies of MB adsorption onto GABS. By elucidating the impact of various variables on the adsorption process, the research contributes valuable insights that can inform the design of efficient wastewater treatment solutions. The comprehensive analysis presented in this study serves as a solid foundation for further research and development in the field of adsorption-based water treatment technologies.


Asunto(s)
Carbón Orgánico , Azul de Metileno , Ulva , Contaminantes Químicos del Agua , Purificación del Agua , Azul de Metileno/química , Carbón Orgánico/química , Ulva/química , Adsorción , Contaminantes Químicos del Agua/química , Cinética , Purificación del Agua/métodos , Azufre/química , Concentración de Iones de Hidrógeno , Agua/química , Algas Comestibles
11.
Mar Genomics ; 75: 101108, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38735675

RESUMEN

Dimethylsulfoniopropionate (DMSP) is one of the most abundant sulfur-containing organic compounds on the earth, which is an important carbon and sulfur source and plays an important role in the global sulfur cycle. Marine microorganisms are an important group involved in DMSP metabolism. The strain Cobetia sp. D5 was isolated from seawater samples in the Yellow Sea area of Qingdao during an algal bloom. There is still limited knowledge on the capacity of DMSP utilization of Cobetia bacteria. The study reports the whole genome sequence of Cobetia sp. D5 to understand its DMSP metabolism pathway. The genome of Cobetia sp. D5 consists of a circular chromosome with a length of 4,233,985 bp and the GC content is 62.56%. Genomic analysis showed that Cobetia sp. D5 contains a set of genes to transport and metabolize DMSP, which can cleave DMSP to produce dimethyl sulphide (DMS) and 3-Hydroxypropionyl-Coenzyme A (3-HP-CoA). DMS diffuses into the environment to enter the global sulfur cycle, whereas 3-HP-CoA is catabolized to acetyl CoA to enter central carbon metabolism. Thus, this study provides genetic insights into the DMSP metabolic processes of Cobetia sp. D5 during a marine algal bloom, and contributes to the understanding of the important role played by marine bacteria in the global sulfur cycle.


Asunto(s)
Genoma Bacteriano , Compuestos de Sulfonio , Azufre , Compuestos de Sulfonio/metabolismo , Azufre/metabolismo , Agua de Mar/microbiología , Sulfuros/metabolismo , China
12.
Sci Rep ; 14(1): 10767, 2024 05 10.
Artículo en Inglés | MEDLINE | ID: mdl-38730011

RESUMEN

Climate change and atmospheric deposition of nitrogen (N) and sulfur (S) impact the health and productivity of forests. Here, we explored the potential impacts of these environmental stressors on ecosystem services provided by future forests in the contiguous U.S. We found that all stand-level services benefitted (+ 2.6 to 8.1%) from reductions in N+S deposition, largely attributable to positive responses to reduced S that offset the net negative effects of lower N levels. Sawtimber responded positively (+ 0.5 to 0.6%) to some climate change, but negatively (- 2.4 to - 3.8%) to the most extreme scenarios. Aboveground carbon (C) sequestration and forest diversity were negatively impacted by all modelled changes in climate. Notably, the most extreme climate scenario eliminated gains in all three services achieved through reduced deposition. As individual tree species responded differently to climate change and atmospheric deposition, associated services unique to each species increased or decreased under future scenarios. Our results suggest that climate change should be considered when evaluating the benefits of N and S air pollution policies on the services provided by U.S. forests.


Asunto(s)
Cambio Climático , Bosques , Nitrógeno , Azufre , Nitrógeno/metabolismo , Azufre/metabolismo , Estados Unidos , Árboles , Ecosistema , Secuestro de Carbono
13.
Nat Commun ; 15(1): 4041, 2024 May 13.
Artículo en Inglés | MEDLINE | ID: mdl-38740794

RESUMEN

Due to the complexity of the catalytic FeMo cofactor site in nitrogenases that mediates the reduction of molecular nitrogen to ammonium, mechanistic details of this reaction remain under debate. In this study, selenium- and sulfur-incorporated FeMo cofactors of the catalytic MoFe protein component from Azotobacter vinelandii are prepared under turnover conditions and investigated by using different EPR methods. Complex signal patterns are observed in the continuous wave EPR spectra of selenium-incorporated samples, which are analyzed by Tikhonov regularization, a method that has not yet been applied to high spin systems of transition metal cofactors, and by an already established grid-of-error approach. Both methods yield similar probability distributions that reveal the presence of at least four other species with different electronic structures in addition to the ground state E0. Two of these species were preliminary assigned to hydrogenated E2 states. In addition, advanced pulsed-EPR experiments are utilized to verify the incorporation of sulfur and selenium into the FeMo cofactor, and to assign hyperfine couplings of 33S and 77Se that directly couple to the FeMo cluster. With this analysis, we report selenium incorporation under turnover conditions as a straightforward approach to stabilize and analyze early intermediate states of the FeMo cofactor.


Asunto(s)
Azotobacter vinelandii , Molibdoferredoxina , Nitrogenasa , Selenio , Azufre , Espectroscopía de Resonancia por Spin del Electrón/métodos , Azotobacter vinelandii/enzimología , Azotobacter vinelandii/metabolismo , Nitrogenasa/metabolismo , Nitrogenasa/química , Molibdoferredoxina/metabolismo , Molibdoferredoxina/química , Selenio/metabolismo , Selenio/química , Azufre/metabolismo , Azufre/química , Proteínas Bacterianas/metabolismo , Proteínas Bacterianas/química
14.
J Pharmacol Sci ; 155(3): 75-83, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38797536

RESUMEN

Sulfur-based redox signaling has long attracted attention as critical mechanisms underlying the development of cardiac diseases and resultant heart failure. Especially, post-translational modifications of cysteine (Cys) thiols in proteins mediate oxidative stress-dependent cardiac remodeling including myocardial hypertrophy, senescence, and interstitial fibrosis. However, we recently revealed the existence of Cys persulfides and Cys polysulfides in cells and tissues, which show higher redox activities than Cys and substantially contribute to redox signaling and energy metabolism. We have established simple evaluation methods that can detect polysulfides in proteins and inorganic polysulfides in cells and revealed that polysulfides abundantly expressed in normal hearts are dramatically catabolized by exposure to ischemic/hypoxic and environmental electrophilic stress, which causes vulnerability of the heart to mechanical load. Accumulation of hydrogen sulfide, a nucleophilic catabolite of persulfides/polysulfides, may lead to reductive stress in ischemic hearts, and perturbation of polysulfide catabolism can improve chronic heart failure after myocardial infarction in mice. This review focuses on the (patho)physiological role of sulfur metabolism in hearts, and proposes that sulfur catabolism during ischemic/hypoxic stress has great potential as a new therapeutic strategy for the treatment of ischemic heart failure.


Asunto(s)
Cisteína , Insuficiencia Cardíaca , Sulfuro de Hidrógeno , Oxidación-Reducción , Sulfuros , Azufre , Insuficiencia Cardíaca/metabolismo , Animales , Humanos , Sulfuros/metabolismo , Azufre/metabolismo , Sulfuro de Hidrógeno/metabolismo , Cisteína/metabolismo , Estrés Oxidativo , Transducción de Señal , Procesamiento Proteico-Postraduccional , Ratones , Terapia Molecular Dirigida , Metabolismo Energético , Miocardio/metabolismo
15.
J Plant Physiol ; 297: 154260, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38701679

RESUMEN

Sulfur is an essential nutrient for all plants, but also crucial for the nitrogen fixing symbiosis between legumes and rhizobia. Sulfur limitation can hamper nodule development and functioning. Until now, it remained unclear whether sulfate uptake into nodules is local or mainly systemic via the roots, and if long-distance transport from shoots to roots and into nodules occurs. Therefore, this work investigates the systemic regulation of sulfur transportation in the model legume Lotus japonicus by applying stable isotope labeling to a split-root system. Metabolite and protein extraction together with mass spectrometry analyses were conducted to determine the plants molecular phenotype and relative isotope protein abundances. Data show that treatments of varying sulfate concentrations including the absence of sulfate on one side of a nodulated root was not affecting nodule development as long as the other side of the root system was provided with sufficient sulfate. Concentrations of shoot metabolites did not indicate a significant stress response caused by a lack of sulfur. Further, we did not observe any quantitative changes in proteins involved in biological nitrogen fixation in response to the different sulfate treatments. Relative isotope abundance of 34S confirmed a long-distance transport of sulfur from one side of the roots to the other side and into the nodules. Altogether, these results provide evidence for a systemic long-distance transport of sulfur via the upper part of the plant to the nodules suggesting a demand driven sulfur distribution for the maintenance of symbiotic N-fixation.


Asunto(s)
Lotus , Proteínas de Plantas , Nódulos de las Raíces de las Plantas , Azufre , Simbiosis , Nódulos de las Raíces de las Plantas/metabolismo , Azufre/metabolismo , Proteínas de Plantas/metabolismo , Lotus/metabolismo , Transporte Biológico , Fijación del Nitrógeno , Sulfatos/metabolismo , Raíces de Plantas/metabolismo
16.
Molecules ; 29(9)2024 Apr 26.
Artículo en Inglés | MEDLINE | ID: mdl-38731499

RESUMEN

Carbon nanodots (CDs) are commonly found in food products and have attracted significant attention from food scientists. There is a high probability of CD exposure in humans, but its impacts on health are unclear. Therefore, health effects associated with CD consumption should be investigated. In this study, we attempted to create a model system of the Maillard reaction between cystine and glucose using a simple cooking approach. The CDs (CG-CDs) were isolated from cystine-glucose-based Maillard reaction products and characterized using fluorescence spectroscopy, X-ray diffractometer (XRD), and transmission electron microscope (TEM). Furthermore, human mesenchymal stem cells (hMCs) were used as a model to unravel the CDs' cytotoxic properties. The physiochemical assessment revealed that CG-CDs emit excitation-dependent fluorescence and possess a circular shape with sizes ranging from 2 to 13 nm. CG-CDs are predominantly composed of carbon, oxygen, and sulfur. The results of the cytotoxicity evaluation indicate good biocompatibility, where no severe toxicity was observed in hMCs up to 400 µg/mL. The DPPH assay demonstrated that CDs exert potent antioxidant abilities. The qPCR analysis revealed that CDs promote the downregulation of the key regulatory genes, PPARγ, C/EBPα, SREBP-1, and HMGCR, coupled with the upregulation of anti-inflammatory genes. Our findings suggested that, along with their excellent biocompatibility, CG-CDs may offer positive health outcomes by modulating critical genes involved in lipogenesis, homeostasis, and obesity pathogenesis.


Asunto(s)
Proteína alfa Potenciadora de Unión a CCAAT , Carbono , Reacción de Maillard , Células Madre Mesenquimatosas , PPAR gamma , Proteína 1 de Unión a los Elementos Reguladores de Esteroles , Humanos , Carbono/química , PPAR gamma/genética , PPAR gamma/metabolismo , Proteína 1 de Unión a los Elementos Reguladores de Esteroles/genética , Proteína 1 de Unión a los Elementos Reguladores de Esteroles/metabolismo , Células Madre Mesenquimatosas/metabolismo , Células Madre Mesenquimatosas/efectos de los fármacos , Proteína alfa Potenciadora de Unión a CCAAT/metabolismo , Proteína alfa Potenciadora de Unión a CCAAT/genética , Puntos Cuánticos/química , Regulación hacia Abajo/efectos de los fármacos , Regulación de la Expresión Génica/efectos de los fármacos , Antioxidantes/farmacología , Antioxidantes/química , Azufre/química
17.
ACS Appl Mater Interfaces ; 16(21): 27011-27027, 2024 May 29.
Artículo en Inglés | MEDLINE | ID: mdl-38743026

RESUMEN

Nanobactericides are employed as a promising class of nanomaterials for eradicating microbial infections, considering the rapid resistance risks of conventional antibiotics. Herein, we present a pioneering approach, reporting the synthesis of two-dimensional titanium disulfide nanosheets coated by nitrogen/sulfur-codoped carbon nanosheets (2D-TiS2@NSCLAA hybrid NSs) using a rapid l-ascorbic acid-assisted sulfurization of Ti3C2Tx-MXene to achieve efficient alternative bactericides. The as-developed materials were systematically characterized using a suite of different spectroscopy and microscopy techniques, in which the X-ray diffraction/Raman spectroscopy/X-ray photoelectron spectroscopy data confirm the existence of TiS2 and C, while the morphological investigation reveals single- to few-layered TiS2 NSs confined by N,S-doped C, suggesting the successful synthesis of the ultrathin hybrid NSs. From in vitro evaluation, the resultant product demonstrates impressive bactericidal potential against both Gram-positive Staphylococcus aureus and Gram-negative Escherichia coli bacteria, achieving a substantial decrease in the bacterial viability under a 1.2 J dose of visible-light irradiation at the lowest concentration of 5 µg·mL-1 compared to Ti3C2Tx (15 µg·mL-1), TiS2-C (10 µg·mL-1), and standard antibiotic ciprofloxacin (15 µg·mL-1), respectively. The enhanced degradation efficiency is attributed to the ultrathin TiS2 NSs encapsulated within heteroatom N,S-doped C, facilitating effective photogenerated charge-carrier separation that generates multiple reactive oxygen species (ROS) and induced physical stress as well as piercing action due to its ultrathin structure, resulting in multimechanistic cytotoxicity and damage to bacterial cells. Furthermore, the obtained results from molecular docking studies conducted via computational simulation (in silico) of the as-synthesized materials against selected proteins (ß-lactamasE. coli/DNA-GyrasE. coli) are well-consistent with the in vitro antibacterial results, providing strong and consistent validation. Thus, this sophisticated study presents a simple and effective synthesis technique for the structural engineering of metal sulfide-based hybrids as functionalized synthetic bactericides.


Asunto(s)
Antibacterianos , Carbono , Escherichia coli , Pruebas de Sensibilidad Microbiana , Nanoestructuras , Nitrógeno , Staphylococcus aureus , Titanio , Antibacterianos/farmacología , Antibacterianos/química , Antibacterianos/síntesis química , Titanio/química , Titanio/farmacología , Escherichia coli/efectos de los fármacos , Staphylococcus aureus/efectos de los fármacos , Carbono/química , Carbono/farmacología , Nanoestructuras/química , Nitrógeno/química , Azufre/química , Azufre/farmacología , Luz
18.
Biochim Biophys Acta Mol Cell Res ; 1871(5): 119746, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38719030

RESUMEN

Iron­sulfur (Fe-S) clusters are one of the most ancient and versatile inorganic cofactors present in the three domains of life. Fe-S clusters are essential cofactors for the activity of a large variety of metalloproteins that play crucial physiological roles. Fe-S protein biogenesis is a complex process that starts with the acquisition of the elements (iron and sulfur atoms) and their assembly into an Fe-S cluster that is subsequently inserted into the target proteins. The Fe-S protein biogenesis is ensured by multiproteic systems conserved across all domains of life. Here, we provide an overview on how bacterial genetics approaches have permitted to reveal and dissect the Fe-S protein biogenesis process in vivo.


Asunto(s)
Proteínas Bacterianas , Proteínas Hierro-Azufre , Proteínas Hierro-Azufre/metabolismo , Proteínas Hierro-Azufre/genética , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Hierro/metabolismo , Azufre/metabolismo , Bacterias/genética , Bacterias/metabolismo
19.
J Hazard Mater ; 472: 134447, 2024 Jul 05.
Artículo en Inglés | MEDLINE | ID: mdl-38692000

RESUMEN

Sulfur-based denitrification is a promising technology for efficient nitrogen removal in low-carbon wastewater, while it is easily affected by toxic substances. This study revealed the inhibitory mechanism of Cr(VI) on thiosulfate-based denitrification, including bio-toxicity and bio-electron characteristics response. The activity of nitrite reductase (NIR) was more sensitive to Cr(VI) than that of nitrate reductase (NAR), and NIR was inhibited by 21.32 % and 19.86 % under 5 and 10 mg/L Cr(VI), resulting in 10.12 and 15.62 mg/L of NO2--N accumulation. The biofilm intercepted 36.57 % of chromium extracellularly by increasing 25.78 % of extracellular polymeric substances, thereby protecting microbes from bio-toxicity under 5 mg/L Cr(VI). However, it was unable to resist 20-30 mg/L of Cr(VI) bio-toxicity as 19.95 and 14.29 mg Cr/(g volatile suspended solids) invaded intracellularly, inducing the accumulation of reactive oxygen species by 165.98 % and 169.12 %, which triggered microbial oxidative-stress and damaged the cells. In terms of electron transfer, S2O32- oxidation was inhibited, and parts of electrons were redirected intracellularly to maintain microbial activity, resulting in insufficient electron donors. Meanwhile, the contents of flavin adenine dinucleotide and cytochrome c decreased under 5-30 mg/L Cr(VI), reducing the electron acquisition rate of denitrification. Thermomonas (the dominant genus) possessed denitrification and Cr(VI) resistance abilities, playing an important role in antioxidant stress and biofilm formation. ENVIRONMENTAL IMPLICATION: Sulfur-based denitrification (SBD) is a promising method for nitrate removal in low-carbon wastewater, while toxic heavy metals such as Cr(VI) negatively impair denitrification. This study elucidated Cr(VI) inhibitory mechanisms on SBD, including bio-toxicity response, bio-electron characteristics, and microbial community structure. Higher concentrations Cr(VI) led to intracellular invasion and oxidative stress, evidenced by ROS accumulation. Moreover, Cr(VI) disrupted electron flow by inhibiting thiosulfate oxidation and affecting electron acquisition by denitrifying enzymes. This study provided valuable insights into Cr(VI) toxicity, which is of great significance for improving wastewater treatment technologies and maintaining efficient and stable operation of SBD in the face of complex environmental challenges.


Asunto(s)
Biopelículas , Cromo , Desnitrificación , Azufre , Cromo/toxicidad , Cromo/metabolismo , Cromo/química , Desnitrificación/efectos de los fármacos , Azufre/química , Azufre/metabolismo , Biopelículas/efectos de los fármacos , Contaminantes Químicos del Agua/toxicidad , Contaminantes Químicos del Agua/química , Contaminantes Químicos del Agua/metabolismo , Nitrito Reductasas/metabolismo , Nitrato-Reductasa/metabolismo , Aguas Residuales/química , Especies Reactivas de Oxígeno/metabolismo , Bacterias/metabolismo , Bacterias/efectos de los fármacos , Electrones , Estrés Oxidativo/efectos de los fármacos
20.
J Hazard Mater ; 472: 134520, 2024 Jul 05.
Artículo en Inglés | MEDLINE | ID: mdl-38718512

RESUMEN

Polyethylene (PE) microplastic, which is detected in various environmental media worldwide, also inevitably enters wastewater treatment plants, which may have an impact on anaerobic processes in wastewater treatment. In this work, the effect of PE microplastics on anaerobic sulfur transformation was explored. Experimental results showed that PE microplastics addition at 0.1%- 0.5% w/w promoted H2S production by 14.8%-27.4%. PE microplastics enhanced the release of soluble organic sulfur and inorganic sulfate, and promoted the bioprocesses of organosulfur compounds hydrolysis and sulfate reduction. Mechanism analysis showed that PE microplastics increased the content of electroactive components (e.g., protein and humic acids) contained in extracellular polymeric substances (EPS). In particular, PE microplastics increased the proportion and the dipole moment of α-helix, an important component involved in electron transfer contained in extracelluar protein, which provided more electron transfer sites and promoted the α-helix mediated electron transfer. These enhanced the direct electron transfer ability of EPSs, which might explain why PE microplastics facilitated the bioprocesses of organosulfur compounds hydrolysis and sulfate reduction. Correspondingly, metagenomic analysis revealed that PE microplastics increased the relative abundance of S2- producers (e.g., Desulfobacula and Desulfonema) and the relative abundance of functional genes involved in anaerobic sulfur transformation (e.g., PepD and cysD), which were beneficial to H2S production in anaerobic system.


Asunto(s)
Microplásticos , Polietileno , Azufre , Microplásticos/toxicidad , Anaerobiosis , Contaminantes Químicos del Agua/toxicidad , Contaminantes Químicos del Agua/análisis , Sulfatos , Biodegradación Ambiental
SELECCIÓN DE REFERENCIAS
DETALLE DE LA BÚSQUEDA