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1.
Int J Mol Sci ; 24(24)2023 Dec 14.
Artículo en Inglés | MEDLINE | ID: mdl-38139317

RESUMEN

Autologous platelet-rich plasma (PRP) therapy has been becoming popular for the treatment of musculotendinous injuries among athletes. However, for individual and practical variations, clinical success is hardly predictable. To overcome this difficulty, we have been exploring possible criterion candidates for monitoring its clinical effectiveness. In this study, we focused on sex-based differences in young elite athletes and compared the biochemical compositions of their PRP. Leukocyte-rich PRP (L-PRP) was manually prepared from blood samples collected from male professional soccer players (mPSPs) (n = 25) and female college athletes (fCAs) (n = 36). Platelet-derived growth factor-BB (PDGF-BB), transforming-growth factor-ß1 (TGFß1), platelet factor-4 (PF4), interleukin-1ß (IL-1ß), and IL-1 receptor antagonist (IL-1RA) were quantified using an enzyme-linked immunosorbent assay. The levels of PDGF-BB, TGFß1, and PF4 in L-PRP were significantly higher in mPSPs than in fCAs. Conversely, IL-1ß and IL-1RA were detected at significantly and slightly higher levels, respectively, in fCAs than in mPSPs. Our findings suggest that, even though L-PRP from fCAs may have lower potential to induce cell growth and differentiation than that of mPSPs, due to the latter's higher capacity to control inflammation, it does not necessarily imply that PRP treatment in fCAs is less effective. Thus, these cytokine levels should be checked before PRP therapy.


Asunto(s)
Proteína Antagonista del Receptor de Interleucina 1 , Interleucina-1beta , Plasma Rico en Plaquetas , Fútbol , Femenino , Humanos , Masculino , Becaplermina , Proteína Antagonista del Receptor de Interleucina 1/sangre , Proteína Antagonista del Receptor de Interleucina 1/química , Interleucina-1beta/sangre , Interleucina-1beta/química , Leucocitos , Factor Plaquetario 4 , Plasma Rico en Plaquetas/química , Receptores de Interleucina-1 , Fútbol/fisiología , Factor de Crecimiento Transformador beta1
2.
Cell Rep ; 42(12): 113581, 2023 12 26.
Artículo en Inglés | MEDLINE | ID: mdl-38103201

RESUMEN

Inflammasomes are multiprotein signaling complexes that activate the innate immune system. Canonical inflammasomes recruit and activate caspase-1, which then cleaves and activates IL-1ß and IL-18, as well as gasdermin D (GSDMD) to induce pyroptosis. In contrast, non-canonical inflammasomes, caspases-4/-5 (CASP4/5) in humans and caspase-11 (CASP11) in mice, are known to cleave GSDMD, but their role in direct processing of other substrates besides GSDMD has remained unknown. Here, we show that CASP4/5 but not CASP11 can directly cleave and activate IL-18. However, CASP4/5/11 can all cleave IL-1ß to generate a 27-kDa fragment that deactivates IL-1ß signaling. Mechanistically, we demonstrate that the sequence identity of the tetrapeptide sequence adjacent to the caspase cleavage site regulates IL-18 and IL-1ß recruitment and activation. Altogether, we have identified new substrates of the non-canonical inflammasomes and reveal key mechanistic details regulating inflammation that may aid in developing new therapeutics for immune-related disorders.


Asunto(s)
Caspasas , Interleucina-18 , Interleucina-1beta , Caspasas/genética , Caspasas/inmunología , Interleucina-18/química , Interleucina-18/genética , Interleucina-18/inmunología , Interleucina-1beta/química , Interleucina-1beta/genética , Interleucina-1beta/inmunología , Células RAW 264.7 , Células HEK293 , Células HeLa , Células THP-1 , Humanos , Inflamasomas/inmunología , Transducción de Señal/genética , Proteolisis , Unión Proteica , Multimerización de Proteína , Infecciones por Salmonella/enzimología , Infecciones por Salmonella/inmunología
3.
Iran J Immunol ; 20(3): 359-367, 2023 09 01.
Artículo en Inglés | MEDLINE | ID: mdl-37431715

RESUMEN

Background: The initial inflammatory reaction starts following occlusion in ischemic stroke (IS). Interleukin-1ß (IL-1ß) is a pro-inflammatory cytokine with a crucial role in the pathogenesis of neurodegenerative disorders. Objective: To investigate the levels of IL-1ß and vitamin D (VitD) in patients with IS compared with controls and their correlation. Methods: The serum level of 25-OH VitD and IL-1ß was assessed in 102 IS patients (0-24 h after stroke) and 102 controls with an enzyme-linked immunosorbent assay (ELISA) kit. Results: We found a significant increase in IL-1ß (80.14±6.8 vs. 60.32±4.1 pg/ml, p<0.05) and a decrease in VitD level (24.3±1.4 vs. 29.9±1.5 ng/ml, p<0.01) in the IS patients compared with the controls. There was a significantly positive correlation between the National Institutes of Health Stroke Scale (NIHSS) and IL-1ß according to both the Spearman correlation (r=0.35, p=0.0003) and the linear regression (beta=0.255, p=0.014). Also, a significant negative association between VitD and NIHSS was detected by the Spearman correlation (r=-0.41, p<0.0001) and the linear regression (beta=-0.381, p=0.000). Moreover, we found a significant negative correlation (r=-0.26, p=0.006) between the serum levels of VitD and IL-1ß in the patient group. Conclusion: Ischemic stroke correlates positively with IL-1ß and negatively with VitD levels. The speculated role of VitD deficiency in the evolution and severity of stroke may be justified by its role in the modification of inflammation.


Asunto(s)
Accidente Cerebrovascular Isquémico , Accidente Cerebrovascular , Deficiencia de Vitamina D , Humanos , Interleucina-1beta/sangre , Interleucina-1beta/química , Accidente Cerebrovascular Isquémico/complicaciones , Accidente Cerebrovascular/diagnóstico , Accidente Cerebrovascular/complicaciones , Estados Unidos , Vitamina D , Deficiencia de Vitamina D/diagnóstico , Deficiencia de Vitamina D/complicaciones
4.
Clin Rheumatol ; 42(4): 1101-1105, 2023 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-36627528

RESUMEN

We aim to assess and compare a cytokine and chemokine profile in tears from patients with IgG4-related disease (IgG4-RD) and Sjögren's syndrome (SS), and to see if this profile could aid in differentiating these two diseases. We included 10 patients with IgG4-RD who met the Comprehensive Diagnostic Criteria for IgG4-RD and 17 patients who met the AECG criteria for primary SS. The Schirmer-I test was carried out using two standardized sterile tear strips, which were then immediately frozen at - 86 °C until assayed. The tears were extracted from the strips after they had been defrosted using a buffer containing 0.5 M NaCl and 0.5% Tween-20. The amounts (pg/ml) of the following cytokines and chemokines were then measured using luminometry: IFN-γ, TNF-α, G-CSF, IL-1-α, IL-1ß, IL-4, IL-7, IL-12p40, IL-12p70, IL-13, IL-17A, CCL2, CCL3, CCL4, CCL11, and CXCL10. In the IgG4-RD group, seven patients had lacrimal gland involvement, five had dry eye symptoms, and six had a positive Schirmer-I test. In the SS group, 16 (94.1%) had dry eyes and all had a positive Schirmer-I test. We were able to differentiate between both diseases using levels of IL-7, IL-1α, and IL-1ß; in particular, the IL-7/IL-1α and IL-7/IL-1ß ratios had the best discriminatory potential, with cut-off values of 0.32 (AUC: 0.93, sensitivity: 94%, specificity: 80%, p = 0.0003) and 12.55 (AUC: 0.96, sensitivity: 94%, specificity: 90%, p = 0.0001), respectively. Our results suggest that IL-7, IL-1α, and IL-1ß tear levels could help differentiate IgG4-RD from SS. Key Points • The lacrimal gland is frequently involved in IgG4-RD and SS. This characteristic makes both diseases mimics of one another. • Patients with IgG4-RD and SS have different profiles of tear cytokines and chemokines. • Tear IL-7, IL-1α, and IL-1ß levels may serve as helpful biomarkers in separating IgG4-RD from SS.


Asunto(s)
Enfermedad Relacionada con Inmunoglobulina G4 , Aparato Lagrimal , Síndrome de Sjögren , Lágrimas , Humanos , Enfermedad Relacionada con Inmunoglobulina G4/diagnóstico , Enfermedad Relacionada con Inmunoglobulina G4/metabolismo , Interleucina-1alfa/química , Interleucina-1beta/química , Interleucina-7/química , Aparato Lagrimal/metabolismo , Aparato Lagrimal/patología , Síndrome de Sjögren/diagnóstico , Síndrome de Sjögren/metabolismo , Lágrimas/química , Lágrimas/metabolismo
5.
Acta Biomed ; 93(4): e2022275, 2022 08 31.
Artículo en Inglés | MEDLINE | ID: mdl-36043975

RESUMEN

BACKGROUND AND AIM: Bacterial vaginosis is among serious health problem for women of reproductive age which influences on their local changes in inflammatory mediators and quality of life. The aim was to assess the dependence of the dynamics of changes in the quality of life of patients with bacterial vaginosis on local levels of TNF-α and IL-1ß. METHODS: In the prospective study 37 women aged 19-40 years with bacterial vaginosis were treated according to the Centers for Disease Control and Prevention. Patients received vaginal suppositories of clindamycin phosphate (100 mg) once daily for 3 days before bedtime. TNF-α, IL-1ß levels in vaginal secretions by means of ELISA test), as well as the quality of life according to the RAND 36-Item Health Survey 1.0 were studied as in control group (once - to determine the reference values) and in the dynamics (the 1st day - before treatment, on the 7th day - after treatment) in the main group. RESULTS: After the treatment microscopy of smears-imprints of vaginal secretions showed the complete absence of pathological microflora. The treatment was well tolerated by all patients. In the result there was proved the role of bacterial vaginosis in a violation of the quality of life of patients mainly due to the mental component of health, even after clinical and laboratory recovery. CONCLUSIONS: There was proved the relation of vaginal TNF-α and IL-1ß with physical and mental health in patients with bacterial vaginosis which can have a prognostic significance of the disease.


Asunto(s)
Interleucina-1beta , Calidad de Vida , Factor de Necrosis Tumoral alfa , Vaginosis Bacteriana , Femenino , Humanos , Interleucina-1beta/química , Estudios Prospectivos , Factor de Necrosis Tumoral alfa/química , Vagina , Vaginosis Bacteriana/tratamiento farmacológico , Vaginosis Bacteriana/microbiología
6.
Fish Shellfish Immunol ; 118: 283-293, 2021 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-34537337

RESUMEN

Interleukin-1ß is a key pro-inflammatory cytokine functioning in initiation of inflammatory responses against bacterial- and viral-infections. In the present study, a putative IL-1ß counterpart was identified from Siberian sturgeon (Acipenser baeri) and designated as AbIL-1ß. The Abil-1ß cDNA sequence consists of 1130 bp with an open reading frame (ORF) of 585 bp, which encodes a 194 amino acid (aa) protein. Multiple amino acid sequence alignment revealed that a possible mature peptide could start at Leu18, although no cut site for ICE (IL-1ß converting enzyme) enzyme was present in Siberian sturgeon IL-1ß. Even if AbIL-1ß shares a relative low identity (33.6%) with another sturgeon type II IL-1ß gene from Acipenser dabryanus, they still clustered together in phylogenetic tree. Endogenous Abil-1ß was highly expressed in brain, blood, head kidney and spleen of healthy Siberian sturgeon, and remarkably up regulated in head kidney, spleen, and liver upon Aeromonas hydrophila (A.h) challenge. Consistently, in vitro stimulation test using heat-killed A.h and LPS significantly increased Abil-1ß transcripts of primary spleen cells. To investigate the bactericidal capability of AbIL-1ß, recombinant AbIL-1ß (rAbIL-1ß) was generated by prokaryotes. Pre-injection of rAbIL-1ß reduced the bacterial load in sturgeon spleen after A.h infection. Further, rAbIL-1ß was served as feed additive and demonstrated to enhance hybrid sturgeon's defense against A.h infection by increased expressional levels of immune-related genes (IL-1ß, IL-6, IL-8, IgM and MHCIIß), elevated activities of serum lysosome, ACH50, and MPO, as well as higher percent survival. In summary, the current results suggested that AbIL-1ß functions in immune regulation and could improve sturgeon's resistance to bacterial infection.


Asunto(s)
Aeromonas hydrophila , Antibacterianos , Proteínas de Peces , Peces , Inflamación , Interleucina-1beta , Aeromonas hydrophila/inmunología , Secuencia de Aminoácidos , Animales , Antibacterianos/inmunología , Evolución Molecular , Proteínas de Peces/química , Proteínas de Peces/genética , Proteínas de Peces/inmunología , Peces/genética , Peces/inmunología , Peces/microbiología , Inflamación/inmunología , Interleucina-1beta/química , Interleucina-1beta/genética , Interleucina-1beta/inmunología , Filogenia
7.
Biosensors (Basel) ; 11(5)2021 May 18.
Artículo en Inglés | MEDLINE | ID: mdl-34069959

RESUMEN

Electric Cell-Substrate Impedance Sensing (ECIS), xCELLigence and cellZscope are commercially available instruments that measure the impedance of cellular monolayers. Despite widespread use of these systems individually, direct comparisons between these platforms have not been published. To compare these instruments, the responses of human brain endothelial monolayers to TNFα and IL1ß were measured on all three platforms simultaneously. All instruments detected transient changes in impedance in response to the cytokines, although the response magnitude varied, with ECIS being the most sensitive. ECIS and cellZscope were also able to attribute responses to particular endothelial barrier components by modelling the multifrequency impedance data acquired by these instruments; in contrast the limited frequency xCELLigence data cannot be modelled. Consistent with its superior impedance sensing, ECIS exhibited a greater capacity than cellZscope to distinguish between subtle changes in modelled endothelial monolayer properties. The reduced resolving ability of the cellZscope platform may be due to its electrode configuration, which is necessary to allow access to the basolateral compartment, an important advantage of this instrument. Collectively, this work demonstrates that instruments must be carefully selected to ensure they are appropriate for the experimental questions being asked when assessing endothelial barrier properties.


Asunto(s)
Técnicas Biosensibles , Células Endoteliales/fisiología , Interleucina-1beta/química , Factor de Necrosis Tumoral alfa/química , Impedancia Eléctrica , Humanos
8.
J Parkinsons Dis ; 11(2): 619-631, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33646178

RESUMEN

BACKGROUND: Oral microbiota has largely escaped attention in Parkinson's disease (PD), despite its pivotal role in maintaining oral and systemic health. OBJECTIVE: The aim of our study was to examine the composition of the oral microbiota and the degree of oral inflammation in PD. METHODS: Twenty PD patients were compared to 20 healthy controls. Neurological, periodontal and dental examinations were performed as well as dental scaling and gingival crevicular fluid sampling for cytokines measurement (interleukine (IL)-1ß, IL-6, IL-1 receptor antagonist (RA), interferon-γ and tumor necrosis factor (TNF)-α). Two months later, oral microbiota was sampled from saliva and subgingival dental plaque. A 16S rRNA gene amplicon sequencing was used to assess bacterial communities. RESULTS: PD patients were in the early and mid-stage phases of their disease (Hoehn & Yahr 2-2.5). Dental and periodontal parameters did not differ between groups. The levels of IL-1ß and IL-1RA were significantly increased in patients compared to controls with a trend for an increased level of TNF-α in patients. Both saliva and subgingival dental plaque microbiota differed between patients and controls. Streptococcus mutans, Kingella oralis, Actinomyces AFQC_s, Veillonella AFUJ_s, Scardovia, Lactobacillaceae, Negativicutes and Firmicutes were more abundant in patients, whereas Treponema KE332528_s, Lachnospiraceae AM420052_s, and phylum SR1 were less abundant. CONCLUSION: Our findings show that the oral microbiome is altered in early and mid-stage PD. Although PD patients had good dental and periodontal status, local inflammation was already present in the oral cavity. The relationship between oral dysbiosis, inflammation and the pathogenesis of PD requires further study.


Asunto(s)
Placa Dental , Disbiosis/complicaciones , Interleucina-1beta/genética , Enfermedad de Parkinson , ARN Ribosómico 16S/genética , Factor de Necrosis Tumoral alfa/genética , Humanos , Inflamación , Interleucina-1beta/química , Kingella , Enfermedad de Parkinson/complicaciones , Factor de Necrosis Tumoral alfa/química
9.
J Mol Biol ; 433(4): 166766, 2021 02 19.
Artículo en Inglés | MEDLINE | ID: mdl-33359099

RESUMEN

Interleukin-1ß (IL-1ß) is a potent pleiotropic cytokine playing a central role in protecting cells from microbial pathogen infection or endogenous stress. After it binds to IL-1RI and recruits IL-1 receptor accessory protein (IL-1RAcP), signaling culminates in activation of NF-κB. Many pathophysiological diseases have been attributed to the derailment of IL-1ß regulation. Several blocking reagents have been developed based on two mechanisms: blocking the binding of IL-1ß to IL-1RI or inhibiting the recruitment of IL-1RAcP to the IL-1ß initial complex. In order to simultaneously fulfill these two actions, a human anti-IL-1ß neutralizing antibody IgG26 was screened from human genetic phage-display library and furthered structure-optimized to final version, IgG26AW. IgG26AW has a sub-nanomolar binding affinity for human IL-1ß. We validated IgG26AW-neutralizing antibodies specific for IL-1ß in vivo to prevent human IL-1ß-driving IL-6 elevation in C56BL/6 mice. Mice underwent treatments with IgG26AW in A549 and MDA-MB-231 xenograft mouse cancer models have also been observed with tumor shrank and inhibition of tumor metastasis. The region where IgG26 binds to IL-1ß also overlaps with the position where IL-1RI and IL-1RAcP bind, as revealed by the 26-Fab/IL-1ß complex structure. Meanwhile, SPR experiments showed that IL-1ß bound by IgG26AW prevented the further binding of IL-1RI and IL-1RAcP, which confirmed our inference from the result of protein structure. Therefore, the inhibitory mechanism of IgG26AW is to block the assembly of the IL-1ß/IL-1RI/IL-1RAcP ternary complex which further inhibits downstream signaling. Based on its high affinity, high neutralizing potency, and novel binding epitope simultaneously occupying both IL-1RI and IL-1RAcP residues that bind to IL-1ß, IgG26AW may be a new candidate for treatments of inflammation-related diseases or for complementary treatments of cancers in which the role of IL-1ß is critical to pathogenesis.


Asunto(s)
Anticuerpos Bloqueadores/química , Anticuerpos Monoclonales/química , Proteína Accesoria del Receptor de Interleucina-1/química , Interleucina-1beta/química , Modelos Moleculares , Conformación Proteica , Receptores Tipo I de Interleucina-1/química , Animales , Antineoplásicos Inmunológicos/química , Antineoplásicos Inmunológicos/farmacología , Sitios de Unión , Línea Celular Tumoral , Mapeo Epitopo/métodos , Epítopos/inmunología , Humanos , Inmunoglobulina G/química , Proteína Accesoria del Receptor de Interleucina-1/metabolismo , Interleucina-1beta/metabolismo , Ratones , Modelos Biológicos , FN-kappa B/metabolismo , Biblioteca de Péptidos , Unión Proteica/efectos de los fármacos , Receptores Tipo I de Interleucina-1/metabolismo , Transducción de Señal , Relación Estructura-Actividad , Ensayos Antitumor por Modelo de Xenoinjerto
10.
Med Chem ; 17(9): 983-993, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-32885758

RESUMEN

BACKGROUND: Inflammation involves a dynamic network that is highly regulated by signals that initiate the inflammation process as well as signals that downregulate it. However, an imbalance between the two leads to tissue damage. Throughout the world, inflammatory disease becomes common in the aging society. The drugs which are used clinically have serious side effects. Natural products or compounds derived from natural products show diversity in structure and play an important role in drug discovery and development. OBJECTIVE: Oreganum Vulgare is used in traditional medicine for various ailments including respiratory and rheumatic disorders, severe cold, suppression of tumors. The current study aims to evaluate the anti-inflammatory potential by evaluating various in vitro parameters. METHODS: Inflammation-induced in macrophages via LPS is the most accepted model for evaluating the antiinflammatory activity of various plant extracts and lead compounds. RESULTS: The extracts (OVEE, OVEAF) as well as the isolated compound(OVRA)of Oreganum Vulgare inhibit the pro-inflammatory cytokines (IL-6 and TNF-α) and NO without affecting cell viability. CONCLUSION: Our study established that the leaf extracts of Oreganum vulgare L. exhibit anti-inflammatory activity and thus confirm its importance in traditional medicine.


Asunto(s)
Antiinflamatorios/farmacología , Antioxidantes/farmacología , Origanum/química , Animales , Antiinflamatorios/química , Antioxidantes/química , Supervivencia Celular/efectos de los fármacos , Cinamatos/química , Cinamatos/metabolismo , Citocinas/metabolismo , Depsidos/química , Depsidos/metabolismo , Dexametasona/química , Dexametasona/metabolismo , Evaluación Preclínica de Medicamentos , Interleucina-1beta/química , Interleucina-1beta/metabolismo , Lipopolisacáridos/farmacología , Ratones , Simulación del Acoplamiento Molecular , Óxido Nítrico/metabolismo , Extractos Vegetales/química , Extractos Vegetales/farmacología , Hojas de la Planta/química , Células RAW 264.7 , Factor de Necrosis Tumoral alfa/química , Factor de Necrosis Tumoral alfa/metabolismo , Ácido Rosmarínico
11.
Biomolecules ; 10(9)2020 09 18.
Artículo en Inglés | MEDLINE | ID: mdl-32962126

RESUMEN

The bioactive piperine, a compound found in some pepper species, has been widely studied because of its therapeutic properties that include the inhibition of an important inflammation pathway triggered by interleukin-1 beta (IL-1ß). However, investigation into the molecular interactions between IL-1ß and piperine is not reported in the literature. Here, we present for the first time the characterisation of the complex formed by IL-1ß and piperine through experimental and computational molecular biophysical analyses. Fluorescence spectroscopy unveiled the presence of one binding site for piperine with an affinity constant of 14.3 × 104 M-1 at 298 K. The thermodynamic analysis indicated that the interaction with IL-1ß was spontaneous (∆G = -25 kJ/mol) and, when split into enthalpic and entropic contributions, the latter was more significant. Circular dichroism spectroscopy showed that piperine did not affect IL-1ß secondary structure (~2%) and therefore its stability. The set of experimental data parameterized the computational biophysical approach. Through molecular docking, the binding site micro-environment was revealed to be composed mostly by non-polar amino acids. Furthermore, molecular dynamics, along with umbrella sampling, are in agreement with the thermodynamic parameters obtained by fluorescence assays and showed that large protein movements are not present in IL-1ß, corroborating the circular dichroism data.


Asunto(s)
Alcaloides/química , Benzodioxoles/química , Interleucina-1beta/química , Simulación del Acoplamiento Molecular , Simulación de Dinámica Molecular , Piperidinas/química , Alcamidas Poliinsaturadas/química , Conformación Proteica , Algoritmos , Alcaloides/metabolismo , Benzodioxoles/metabolismo , Sitios de Unión , Fenómenos Biofísicos , Dicroismo Circular , Interleucina-1beta/metabolismo , Cinética , Modelos Químicos , Piperidinas/metabolismo , Alcamidas Poliinsaturadas/metabolismo , Unión Proteica , Espectrometría de Fluorescencia , Termodinámica
12.
Molecules ; 25(12)2020 Jun 19.
Artículo en Inglés | MEDLINE | ID: mdl-32575582

RESUMEN

Inspired by the remarkable bioactivities exhibited by the natural products, piperine and piperlongumine, we synthesised eight natural product-inspired analogues to further investigate their structures. For the first time, we confirmed the structure of the key cyclised dihydropyrazolecarbothioamide piperine analogues including the use of two-dimensional (2D) 15N-based spectroscopy nuclear magnetic resonance (NMR) spectroscopy. Prior investigations demonstrated promising results from these scaffolds for the inhibition of inflammatory response via downregulation of the IL-1ß and NF-κB pathway. However, the molecular interaction of these molecules with their protein targets remains unknown. Ab initio calculations revealed the electronic density function map of the molecules, showing the effects of structural modification in the electronic structure. Finally, molecular interactions between the synthesized molecules and the proteins IL-1ß and NF-κB were achieved. Docking results showed that all the analogues interact in the DNA binding site of NF-κB with higher affinity compared to the natural products and, with the exception of 9a and 9b, have higher affinity than the natural products for the binding site of IL-1ß. Specificity for the molecular recognition of 3a, 3c and 9b with IL-1ß through cation-π interactions was determined. These results revealed 3a, 3c, 4a, 4c and 10 as the most promising molecules to be evaluated as IL-1ß and NF-κB inhibitors.


Asunto(s)
Alcaloides/química , Benzodioxoles/química , Dioxolanos/química , Interleucina-1beta , Simulación del Acoplamiento Molecular , Piperidinas/química , Alcamidas Poliinsaturadas/química , Factor de Transcripción ReIA , Humanos , Interleucina-1beta/antagonistas & inhibidores , Interleucina-1beta/química , Resonancia Magnética Nuclear Biomolecular , Factor de Transcripción ReIA/antagonistas & inhibidores , Factor de Transcripción ReIA/química
13.
J Med Chem ; 63(14): 7559-7568, 2020 07 23.
Artículo en Inglés | MEDLINE | ID: mdl-32543856

RESUMEN

Nowadays, it is possible to combine X-ray crystallography and fragment screening in a medium throughput fashion to chemically probe the surfaces used by proteins to interact and use the outcome of the screens to systematically design protein-protein inhibitors. To prove it, we first performed a bioinformatics analysis of the Protein Data Bank protein complexes, which revealed over 400 cases where the crystal lattice of the target in the free form is such that large portions of the interacting surfaces are free from lattice contacts and therefore accessible to fragments during soaks. Among the tractable complexes identified, we then performed single fragment crystal screens on two particular interesting cases: the Il1ß-ILR and p38α-TAB1 complexes. The result of the screens showed that fragments tend to bind in clusters, highlighting the small-molecule hotspots on the surface of the target protein. In most of the cases, the hotspots overlapped with the binding sites of the interacting proteins.


Asunto(s)
Proteínas Adaptadoras Transductoras de Señales/metabolismo , Interleucina-1beta/metabolismo , Proteína Quinasa 14 Activada por Mitógenos/metabolismo , Multimerización de Proteína/efectos de los fármacos , Receptores de Interleucina-1/metabolismo , Adamantano/análogos & derivados , Adamantano/metabolismo , Proteínas Adaptadoras Transductoras de Señales/química , Animales , Sitios de Unión , Cristalografía por Rayos X , Bases de Datos de Proteínas , Humanos , Interleucina-1beta/química , Proteína Quinasa 14 Activada por Mitógenos/química , Unión Proteica/efectos de los fármacos , Receptores de Interleucina-1/química , Sulfonamidas/química , Sulfonamidas/metabolismo , Levaduras/química
14.
Biomolecules ; 10(5)2020 05 21.
Artículo en Inglés | MEDLINE | ID: mdl-32455586

RESUMEN

Several food-derived molecules, including proteins and peptides, can show bioactivities toward the promotion of well-being and disease prevention in humans. There is still a lack of information about the potential effects on immune and inflammatory responses in mammalian cells following the ingestion of seed storage proteins. This study, for the first time, describes the potential immunomodulation capacity of chenopodin, the major protein component of quinoa seeds. After characterizing the molecular features of the purified protein, we were able to separate two different forms of chenopodin, indicated as LcC (Low charge Chenopodin, 30% of total chenopodin) and HcC (High charge Chenopodin, 70% of total chenopodin). The biological effects of LcC and HcC were investigated by measuring NF-κB activation and IL-8 expression studies in undifferentiated Caco-2 cells. Inflammation was elicited using IL-1ß. The results indicate that LcC and HcC show potential anti-inflammatory activities in an intestinal cell model, and that the proteins can act differently, depending on their structural features. Furthermore, the molecular mechanisms of action and the structural/functional relationships of the protein at the basis of the observed bioactivity were investigated using in silico analyses and structural predictions.


Asunto(s)
Antiinflamatorios/farmacología , Interleucina-1beta/metabolismo , Proteínas de Plantas/farmacología , Antiinflamatorios/química , Sitios de Unión , Células CACO-2 , Humanos , Interleucina-1beta/química , Interleucina-8/metabolismo , FN-kappa B/metabolismo , Proteínas de Plantas/química , Unión Proteica , Isoformas de Proteínas/química , Isoformas de Proteínas/farmacología , Transducción de Señal/efectos de los fármacos
15.
Proteins ; 88(7): 830-839, 2020 07.
Artículo en Inglés | MEDLINE | ID: mdl-31904133

RESUMEN

The relative orientation of the two variable domains, VH and VL , influences the shape of the antigen binding site, that is, the paratope, and is essential to understand antigen specificity. ABangle characterizes the VH -VL orientation by using five angles and a distance and compares it to other known structures. Molecular dynamics simulations of antibody variable domains (Fvs) reveal fluctuations in the relative domain orientations. The observed dynamics between these domains are confirmed by NMR experiments on a single-chain variable fragment antibody (scFv) in complex with IL-1ß and an antigen-binding fragment (Fab). The variability of these relative domain orientations can be interpreted as a structural feature of antibodies, which increases the antibody repertoire significantly and can enlarge the number of possible binding partners substantially. The movements of the VH and VL domains are well sampled with molecular dynamics simulations and are in agreement with the NMR ensemble. Fast Fourier transformation of the ABangle metrics allows to assign timescales of 0.1-10 GHz to the fastest collective interdomain movements. The results clearly show the necessity of dynamics to understand and characterize the favorable orientations of the VH and VL domains implying a considerable binding interface flexibility and reveal in all antibody fragments (Fab, scFv, and Fv) very similar VH -VL interdomain variations comparable to the distributions observed for known X-ray structures of antibodies. SIGNIFICANCE STATEMENT: Antibodies have become key players as therapeutic agents. The binding ability of antibodies is determined by the antigen-binding fragment (Fab), in particular the variable fragment region (Fv). Antigen-binding is mediated by the complementarity-determining regions consisting of six loops, each three of the heavy and light chain variable domain VH and VL . The relative orientation of the VH and VL domains influences the shape of the antigen-binding site and is a major objective in antibody design. In agreement with NMR experiments and molecular dynamics simulations, we show a considerable binding site flexibility in the low nanosecond timescale. Thus we suggest that this flexibility and its implications for binding and specificity should be considered when designing and optimizing therapeutic antibodies.


Asunto(s)
Cadenas Pesadas de Inmunoglobulina/química , Cadenas Ligeras de Inmunoglobulina/química , Interleucina-1beta/química , Anticuerpos de Cadena Única/química , Sitios de Unión , Sitios de Unión de Anticuerpos , Humanos , Cadenas Pesadas de Inmunoglobulina/metabolismo , Cadenas Ligeras de Inmunoglobulina/metabolismo , Interleucina-1beta/metabolismo , Cinética , Simulación de Dinámica Molecular , Resonancia Magnética Nuclear Biomolecular , Unión Proteica , Conformación Proteica en Hélice alfa , Conformación Proteica en Lámina beta , Dominios y Motivos de Interacción de Proteínas , Anticuerpos de Cadena Única/metabolismo , Termodinámica
16.
IEEE/ACM Trans Comput Biol Bioinform ; 17(4): 1364-1371, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-30676974

RESUMEN

Detrimental effect of bad oral habits, such as smoking and chewing tobacco, on chronic periodontitis (CP) manifest chronic inflammation of gingival tissues which majorly results in gum bleeding, and teeth loss. A genetic association study of Interleukin 1 beta (IL1ß) has been conducted in CP patients having smoking and chewing tobacco habits in regular life style. A molecular docking study has been consequently done to analyze the effect of tobacco on CP progression in depth. All statistical evaluation has been done by using SPSS v16.0. The findings of the study show the significant association of IL1ß gene polymorphisms with CP increased susceptibility in combination of oral habits as mentioned earlier. The docking profile has showed the highest binding affinity of IL1ß protein with the Nicotine derived Nitrosamine Ketone (NNK), one of the derivatives of nicotine which is in-taken through the habits associated with smoking and chewing tobacco. Nicotine, N-nitrosoanabasine, and N-nitrosonornicotine, the other derivatives, have also demonstrated significant impact over the IL1ß protein-caused altered expression. Thus, this study concluded that the harmful effect of tobacco may increase the inflammation in periodontia by inducing the inflammatory active site of the IL1ß protein in the CP patients.


Asunto(s)
Periodontitis Crónica , Estudios de Asociación Genética , Interleucina-1beta , Uso de Tabaco , Adulto , Anciano , Periodontitis Crónica/genética , Periodontitis Crónica/metabolismo , Femenino , Humanos , Interleucina-1beta/química , Interleucina-1beta/genética , Interleucina-1beta/metabolismo , Masculino , Persona de Mediana Edad , Simulación del Acoplamiento Molecular , Nicotina/química , Nicotina/metabolismo , Nitrosaminas/química , Nitrosaminas/metabolismo , Unión Proteica , Uso de Tabaco/genética , Uso de Tabaco/metabolismo , Adulto Joven
17.
Glycobiology ; 29(11): 803-812, 2019 10 21.
Artículo en Inglés | MEDLINE | ID: mdl-31317192

RESUMEN

IL-1RI is the signaling receptor for the IL-1 family of cytokines that are involved in establishment of the innate and acquired immune systems. Glycosylated extracellular (EC) domain of the IL-1RI binds to agonist such as IL-1ß or antagonist ligands and the accessory protein to form the functional signaling complex. Dynamics and ligand binding of the IL-1RI is influenced by presence of the glycosaminoglycans (GAGs) of the EC matrix. Here a combination of molecular dockings and molecular dynamics simulations of the unglycosylated, partially N-glycosylated and fully N-glycosylated IL-1RI EC domain in the apo, GAG-bound and IL-1ß-bound states were carried out to explain the co-occurring dynamical effect of receptor's glycosylation and GAGs. It was shown that the IL-1RI adopts two types of "extended" and "locked" conformations in its dynamical pattern, and glycosylation maintains the receptor in the latter form. Maintaining the receptor in the locked conformation disfavors IL-1ß binding by burying its two binding site on the IL-1RI EC domain. Glycosylation disfavors GAG binding to the extended IL-1RI EC domain by sterically limiting the GAGs degrees of freedom in targeting its binding site, while it favors GAG binding to the locked IL-1RI by favorable packing interactions.


Asunto(s)
Glicosaminoglicanos/metabolismo , Receptores Tipo I de Interleucina-1/química , Receptores Tipo I de Interleucina-1/metabolismo , Sitios de Unión , Glicosaminoglicanos/química , Glicosilación , Humanos , Interleucina-1beta/química , Interleucina-1beta/metabolismo , Simulación de Dinámica Molecular
18.
Brain Behav Immun ; 81: 560-573, 2019 10.
Artículo en Inglés | MEDLINE | ID: mdl-31310797

RESUMEN

A reduction in food intake is commonly observed after bacterial infection, a phenomenon that can be reproduced by peripheral administration of Gram-negative bacterial lipopolysaccharide (LPS) or interleukin-1beta (IL-1ß), a pro-inflammatory cytokine released by LPS-activated macrophages. The arcuate nucleus of the hypothalamus (ARH) plays a major role in food intake regulation and expresses IL-1 type 1 receptor (IL-1R1) mRNA. In the present work, we tested the hypothesis that IL-1R1 expressing cells in the ARH mediate IL-1ß and/or LPS-induced hypophagia in the rat. To do so, we developed an IL-1ß-saporin conjugate, which eliminated IL-R1-expressing neurons in the hippocampus, and micro-injected it into the ARH prior to systemic IL-1ß and LPS administration. ARH IL-1ß-saporin injection resulted in loss of neuropeptide Y-containing cells and attenuated hypophagia and weight loss after intraperitoneal IL-1ß, but not LPS, administration. In conclusion, the present study shows that ARH NPY-containing neurons express functional IL-1R1s that mediate peripheral IL-1ß-, but not LPS-, induced hypophagia. Our present and previous findings indicate that the reduction of food intake after IL-1ß and LPS are mediated by different neural pathways.


Asunto(s)
Peso Corporal/efectos de los fármacos , Ingestión de Alimentos/efectos de los fármacos , Interleucina-1beta/farmacología , Saporinas/farmacología , Animales , Núcleo Arqueado del Hipotálamo/efectos de los fármacos , Núcleo Arqueado del Hipotálamo/metabolismo , Citocinas/metabolismo , Hipotálamo/efectos de los fármacos , Hipotálamo/metabolismo , Proteína Antagonista del Receptor de Interleucina 1/metabolismo , Interleucina-1/metabolismo , Interleucina-1beta/química , Lipopolisacáridos/farmacología , Masculino , Vías Nerviosas/metabolismo , Neuronas/metabolismo , Neuropéptido Y/metabolismo , Ratas , Ratas Sprague-Dawley , Proteínas Recombinantes/farmacología
19.
ACS Chem Biol ; 14(7): 1398-1402, 2019 07 19.
Artículo en Inglés | MEDLINE | ID: mdl-31246002

RESUMEN

Very weak interactions between small organic molecules and proteins have long been predicted and are expected to have dissociation constants of hundreds of millimolar and above. Unfortunately, quantitative evaluation of binding in a high-resolution structural context for this affinity regime is particularly difficult and often impossible using existing experimental approaches. Here, we show that nanoscale encapsulation of single protein molecules within the water core of reverse micelles enables the detection and evaluation of weak binding interactions at atomic resolution using solution NMR spectroscopy. This strategy is used to survey the interactions of a set of small molecules with the cytokine interleukin-1ß (IL-1ß). The interaction of IL-1ß with these molecules is found to vary from more diffuse and weak binding modes to more specific and with a relatively higher affinity. The interactions detected here cover a large portion of the protein surface and have dissociation constants mostly in the low molar range. These results illustrate the ability of a protein to interact productively with a variety of small molecule functional groups and point to a broader potential to target even relatively featureless protein surfaces for applications in chemical biology and drug discovery.


Asunto(s)
Interleucina-1beta/metabolismo , Resonancia Magnética Nuclear Biomolecular , Sitios de Unión , Descubrimiento de Drogas , Humanos , Interleucina-1beta/química , Ligandos , Micelas , Modelos Moleculares , Unión Proteica , Solventes
20.
Sci Rep ; 9(1): 4913, 2019 03 20.
Artículo en Inglés | MEDLINE | ID: mdl-30894604

RESUMEN

Interleukin-1ß (IL-1ß) is a major cytokine that initiates and enhances inflammatory responses. Excessive IL-1ß production is a characteristic of most chronic inflammatory diseases, including atherosclerosis, type 2 diabetes, and obesity, which affect a large proportion of the global population. The production of bioactive IL-1ß is mediated by a caspase-1-activating complex known as an 'inflammasome'. The NLRP3 inflammasome has been associated with several human inflammatory and autoimmune diseases and represents a potential therapeutic target for disrupting IL-1ß production. We used molecular modeling guided by molecular dynamics simulations to design α-helical stapled peptides targeting the pyrin domain of the adaptor protein ASC to interrupt the development of its filament, which is crucial for NLRP3 inflammasome formation. The peptides were effectively internalized by human monocytic cells and efficiently suppressed the release of the inflammasome-regulated cytokines IL-1ß and IL-18, following exogenous activation of the NLRP3 inflammasome. The peptides reduced ASC speck formation and caspase-1 processing thereby suppressing pro-IL-1ß processing and release of active IL-1ß. This is the first demonstration of the successful use of stapled peptides designed to target the adaptor protein ASC, and can be extended to other inflammatory pathways to disrupt excessive IL-1ß production.


Asunto(s)
Proteínas Adaptadoras de Señalización CARD/química , Péptidos de Penetración Celular/farmacología , Inflamasomas/efectos de los fármacos , Interleucina-1beta/química , Proteína con Dominio Pirina 3 de la Familia NLR/química , Sitios de Unión , Proteínas Adaptadoras de Señalización CARD/antagonistas & inhibidores , Proteínas Adaptadoras de Señalización CARD/genética , Proteínas Adaptadoras de Señalización CARD/inmunología , Péptidos de Penetración Celular/química , Regulación de la Expresión Génica , Humanos , Interacciones Hidrofóbicas e Hidrofílicas , Inflamasomas/inmunología , Inflamasomas/metabolismo , Interleucina-18/genética , Interleucina-18/inmunología , Interleucina-1beta/antagonistas & inhibidores , Interleucina-1beta/genética , Interleucina-1beta/inmunología , Lipopolisacáridos/farmacología , Modelos Moleculares , FN-kappa B/genética , FN-kappa B/inmunología , Proteína con Dominio Pirina 3 de la Familia NLR/antagonistas & inhibidores , Proteína con Dominio Pirina 3 de la Familia NLR/genética , Proteína con Dominio Pirina 3 de la Familia NLR/inmunología , Nigericina/farmacología , Prueba de Estudio Conceptual , Unión Proteica , Conformación Proteica en Hélice alfa , Dominios y Motivos de Interacción de Proteínas , Especies Reactivas de Oxígeno/inmunología , Especies Reactivas de Oxígeno/metabolismo , Transducción de Señal , Células THP-1 , Termodinámica
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