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1.
Curr Genet ; 70(1): 7, 2024 May 14.
Artículo en Inglés | MEDLINE | ID: mdl-38743270

RESUMEN

Fermented eggplant is a traditional fermented food, however lactic acid bacteria capable of producing exopolysaccharide (EPS) have not yet been exploited. The present study focused on the production and protective effects against oxidative stress of an EPS produced by Lacticaseibacillus paracasei NC4 (NC4-EPS), in addition to deciphering its genomic features and EPS biosynthesis pathway. Among 54 isolates tested, strain NC4 showed the highest EPS yield and antioxidant activity. The maximum EPS production (2.04 ± 0.11 g/L) was achieved by culturing in MRS medium containing 60 g/L sucrose at 37 °C for 48 h. Under 2 mM H2O2 stress, the survival of a yeast model Saccharomyces cerevisiae treated with 0.4 mg/mL NC4-EPS was 2.4-fold better than non-treated cells, which was in agreement with the catalase and superoxide dismutase activities measured from cell lysates. The complete genome of NC4 composed of a circular chromosome of 2,888,896 bp and 3 circular plasmids. The NC4 genome comprises more genes with annotated function in nitrogen metabolism, phosphorus metabolism, cell division and cell cycle, and iron acquisition and metabolism as compared to other reported L. paracasei. Of note, the eps gene cluster is not conserved across L. paracasei. Pathways of sugar metabolism for EPS biosynthesis were proposed for the first time, in which gdp pathway only present in few plant-derived bacteria was identified. These findings shed new light on the cell-protective activity and biosynthesis of EPS produced by L. paracasei, paving the way for future efforts to enhance yield and tailor-made EPS production for food and pharmaceutical industries.


Asunto(s)
Fermentación , Lacticaseibacillus paracasei , Estrés Oxidativo , Polisacáridos Bacterianos , Solanum melongena , Polisacáridos Bacterianos/biosíntesis , Polisacáridos Bacterianos/metabolismo , Solanum melongena/microbiología , Solanum melongena/genética , Solanum melongena/metabolismo , Lacticaseibacillus paracasei/metabolismo , Lacticaseibacillus paracasei/genética , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/metabolismo , Antioxidantes/metabolismo , Peróxido de Hidrógeno/metabolismo , Genoma Bacteriano , Alimentos Fermentados/microbiología , Superóxido Dismutasa/metabolismo , Superóxido Dismutasa/genética
2.
Int J Biol Macromol ; 269(Pt 1): 131813, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38685537

RESUMEN

Microbial exopolysaccharides (EPS) have various physiological functions such as antioxidant, anti-tumor, cholesterol lowering, and immune regulation. However, improving traditional fermentation conditions to increase the production of EPS from Lactiplantibacillus plantarum (L. plantarum) is limited. In this study, we aimed to better improve EPS production and physiological functions of L. plantarum YM-4-3 strain by overexpressing and knocking out the priming glycosyltransferase genes cps 2E and cps 4E for the first time. As a result, the EPS production of the overexpression strain was 30.15 %, 26.84 % and 36.29 % higher than WT, respectively. The EPS production of the knockout strain was significantly lower than that of the WT. At the same time, transcriptome data showed that the gene expression levels of each experimental strain had changed. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways found that the glycolysis/gluconeogenesis pathway had the highest gene enrichment in the metabolic pathway. The monosaccharide components of the EPS of each experimental strain were different from those of the WT and the EPS of the experimental strain showed stronger activity against oxidation. In conclusion, this study contributes to the efficient production and application of L. plantarum EPS and helps to understand the mechanism of EPS regulation in L. plantarum.


Asunto(s)
Glicosiltransferasas , Lactobacillus plantarum , Polisacáridos Bacterianos , Glicosiltransferasas/genética , Glicosiltransferasas/metabolismo , Polisacáridos Bacterianos/biosíntesis , Lactobacillus plantarum/genética , Lactobacillus plantarum/metabolismo , Regulación Bacteriana de la Expresión Génica , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Fermentación
3.
BMC Microbiol ; 24(1): 142, 2024 Apr 25.
Artículo en Inglés | MEDLINE | ID: mdl-38664612

RESUMEN

BACKGROUND: The genomic information available for Pediococcus pentosaceus is primarily derived from fermented fruits and vegetables, with less information available from fermented meat. P. pentosaceus LL-07, a strain isolated from fermented meat, has the capability of producing exopolysaccharides (EPS). To assess the probiotic attributes of P. pentosaceus LL-07, we conducted whole-genome sequencing (WGS) using the PacBio SequelIIe and Illumina MiSeq platforms, followed by in vitro experiments to explore its probiotic potential. RESULTS: The genome size of P. pentosaceus LL-07 is 1,782,685 bp, comprising a circular chromosome and a circular plasmid. Our investigation revealed the absence of a CRISPR/Cas system. Sugar fermentation experiments demonstrated the characteristics of carbohydrate metabolism. P. pentosaceus LL-07 contains an EPS synthesis gene cluster consisting of 13 genes, which is different from the currently known gene cluster structure. NO genes associated with hemolysis or toxin synthesis were detected. Additionally, eighty-six genes related to antibiotic resistance were identified but not present in the prophage, transposon or plasmid. In vitro experiments demonstrated that P. pentosaceus LL-07 was comparable to the reference strain P. pentosaceus ATCC25745 in terms of tolerance to artificial digestive juice and bile, autoaggregation and antioxidation, and provided corresponding genomic evidence. CONCLUSION: This study confirmed the safety and probiotic properties of P. pentosaceus LL-07 via complete genome and phenotype analysis, supporting its characterization as a potential probiotic candidate.


Asunto(s)
Fermentación , Genoma Bacteriano , Pediococcus pentosaceus , Polisacáridos Bacterianos , Probióticos , Pediococcus pentosaceus/genética , Pediococcus pentosaceus/metabolismo , Polisacáridos Bacterianos/metabolismo , Polisacáridos Bacterianos/biosíntesis , Secuenciación Completa del Genoma , Alimentos Fermentados/microbiología , Carne/microbiología , Familia de Multigenes , Genómica/métodos , Humanos , Plásmidos/genética , Microbiología de Alimentos
4.
Microb Cell Fact ; 23(1): 117, 2024 Apr 22.
Artículo en Inglés | MEDLINE | ID: mdl-38644470

RESUMEN

Several antiviral agents lost their efficacy due to their severe side effects and virus mutations. This study aimed to identify and optimize the conditions for exopolysaccharide (EPS) production from a newly isolated cyanobacterium, Acaryochloris Al-Azhar MNE ON864448.1, besides exploring its antiviral activity. The cyanobacterial EPS was purified through DEAE-52 cellulose column with a final yield of 83.75%. Different analysis instruments were applied for EPS identification, including Fourier-transform infrared (FT-IR) spectroscopy, thermogravimetric analysis (TGA), and gas chromatographic-mass spectrometry (GC-MS). Plackett-Burman's design demonstrated that working volume (X1), EDTA (X2), inoculum size (X3), CaCl2 (X4), and NaCl (X5) are the most important variables influencing EPS production. Central composite design (CCD) exhibited maximum EPS yield (9.27 mg/mL) at a working volume of 300 mL in a 1 L volumetric flask, EDTA 0.002 g/L, inoculum size 7%, CaCl2 0.046 g/L, and NaCl 20 g/L were applied. EPS showed potent antiviral activities at different stages of herpes simplex virus type-1 and 2 (HSV-1, HSV-2), adenovirus (ADV) and coxsackievirus (A16) infections. The highest half-maximal inhibitory concentration (IC50) (6.477 µg/mL) was recorded during HSV-1 internalization mechanism, while the lowest IC50 (0.005669 µg/mL) was recorded during coxsackievirus neutralization mechanism.


Asunto(s)
Antivirales , Cianobacterias , Polisacáridos Bacterianos , Antivirales/farmacología , Antivirales/química , Antivirales/aislamiento & purificación , Cianobacterias/química , Polisacáridos Bacterianos/farmacología , Polisacáridos Bacterianos/química , Polisacáridos Bacterianos/aislamiento & purificación , Polisacáridos Bacterianos/biosíntesis , Animales , Humanos , Espectroscopía Infrarroja por Transformada de Fourier , Chlorocebus aethiops
5.
J Microbiol Biotechnol ; 34(5): 1135-1145, 2024 May 28.
Artículo en Inglés | MEDLINE | ID: mdl-38533592

RESUMEN

When cells are exposed to freezing temperatures, high concentrations of cryoprotective agents (CPA) prevent ice crystal formation, thus enhancing cell survival. However, high concentrations of CPAs can also cause cell toxicity. Exopolysaccharides (EPSs) from polar marine environments exhibit lower toxicity and display effects similar to traditional CPA. In this study, we sought to address these issues by i) selecting strains that produce EPS with novel cryoprotective activity, and ii) optimizing culture conditions for EPS production. Sixty-six bacteria producing mucous substances were isolated from the Ross Sea (Antarctic Ocean) using solid marine agar plates. Among them, Pseudoalteromonas sp. RosPo-2 was ultimately selected based on the rheological properties of the produced EPS (p-CY02). Cryoprotective activity experiments demonstrated that p-CY02 exhibited significantly cryoprotective activity at a concentration of 0.8% (w/v) on mammalian cells (HaCaT). This activity was further improved when combined with various concentrations of dimethyl sulfoxide (DMSO) compared to using DMSO alone. Moreover, the survival rate of HaCaT cells treated with 5% (v/v) DMSO and 0.8% (w/v) p-CY02 was measured at 87.9 ± 2.8% after freezing treatment. This suggests that p-CY02 may be developed as a more effective, less toxic, and novel non-permeating CPA. To enhance the production of EPS with cryoprotective activity, Response Surface Methodology (RSM) was implemented, resulting in a 1.64-fold increase in production of EPS with cryoprotective activity.


Asunto(s)
Supervivencia Celular , Crioprotectores , Medios de Cultivo , Polisacáridos Bacterianos , Pseudoalteromonas , Pseudoalteromonas/metabolismo , Polisacáridos Bacterianos/farmacología , Polisacáridos Bacterianos/biosíntesis , Polisacáridos Bacterianos/metabolismo , Crioprotectores/farmacología , Crioprotectores/metabolismo , Medios de Cultivo/química , Regiones Antárticas , Humanos , Supervivencia Celular/efectos de los fármacos , Dimetilsulfóxido/farmacología , Dimetilsulfóxido/metabolismo , Células HaCaT , Línea Celular , Agua de Mar/microbiología
6.
Plant J ; 118(4): 1136-1154, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38341846

RESUMEN

Rhizobial phosphatidylcholine (PC) is thought to be a critical phospholipid for the symbiotic relationship between rhizobia and legume host plants. A PC-deficient mutant of Sinorhizobium meliloti overproduces succinoglycan, is unable to swim, and lacks the ability to form nodules on alfalfa (Medicago sativa) host roots. Suppressor mutants had been obtained which did not overproduce succinoglycan and regained the ability to swim. Previously, we showed that point mutations leading to altered ExoS proteins can reverse the succinoglycan and swimming phenotypes of a PC-deficient mutant. Here, we report that other point mutations leading to altered ExoS, ChvI, FabA, or RpoH1 proteins also revert the succinoglycan and swimming phenotypes of PC-deficient mutants. Notably, the suppressor mutants also restore the ability to form nodule organs on alfalfa roots. However, nodules generated by these suppressor mutants express only low levels of an early nodulin, do not induce leghemoglobin transcript accumulation, thus remain white, and are unable to fix nitrogen. Among these suppressor mutants, we detected a reduced function mutant of the 3-hydoxydecanoyl-acyl carrier protein dehydratase FabA that produces reduced amounts of unsaturated and increased amounts of shorter chain fatty acids. This alteration of fatty acid composition probably affects lipid packing thereby partially compensating for the previous loss of PC and contributing to the restoration of membrane homeostasis.


Asunto(s)
Ácidos Grasos , Medicago sativa , Fosfatidilcolinas , Nodulación de la Raíz de la Planta , Sinorhizobium meliloti , Simbiosis , Sinorhizobium meliloti/fisiología , Sinorhizobium meliloti/genética , Medicago sativa/microbiología , Medicago sativa/genética , Nodulación de la Raíz de la Planta/genética , Ácidos Grasos/metabolismo , Ácidos Grasos/biosíntesis , Fosfatidilcolinas/metabolismo , Fosfatidilcolinas/biosíntesis , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Nódulos de las Raíces de las Plantas/microbiología , Nódulos de las Raíces de las Plantas/genética , Nódulos de las Raíces de las Plantas/metabolismo , Mutación , Polisacáridos Bacterianos/metabolismo , Polisacáridos Bacterianos/biosíntesis , Fijación del Nitrógeno
7.
Sci Rep ; 12(1): 2181, 2022 02 09.
Artículo en Inglés | MEDLINE | ID: mdl-35140278

RESUMEN

Bacterial cellulose (BC) is an ecofriendly biopolymer with diverse commercial applications. Its use is limited by the capacity of bacterial production strains and cost of the medium. Mining for novel organisms with well-optimized growth conditions will be important for the adoption of BC. In this study, a novel BC-producing strain was isolated from rotten fruit samples and identified as Lactiplantibacillus plantarum from 16S rRNA sequencing. Culture conditions were optimized for supporting maximal BC production using one variable at a time, Plackett-Burman design, and Box Behnken design approaches. Results indicated that a modified Yamanaka medium supported the highest BC yield (2.7 g/l), and that yeast extract, MgSO4, and pH were the most significant variables influencing BC production. After optimizing the levels of these variables through Box Behnken design, BC yield was increased to 4.51 g/l. The drug delivery capacity of the produced BC membrane was evaluated through fabrication with sodium alginate and gentamycin antibiotic at four different concentrations. All membranes (normal and fabricated) were characterized by scanning electron microscope, Fourier transform-infrared spectroscopy, X-ray diffraction, and mechanical properties. The antimicrobial activity of prepared composites was evaluated by using six human pathogens and revealed potent antibacterial activity against Escherichia coli, Klebsiella pneumoniae, Staphylococcus aureus, and Streptococcus mutans, with no detected activity against Pseudomonas aeruginosa and Candida albicans.


Asunto(s)
Antiinfecciosos/farmacología , Técnicas de Cultivo de Célula/métodos , Celulosa/biosíntesis , Lactobacillaceae/química , Lactobacillaceae/genética , Membranas/química , Alginatos/farmacología , Antibacterianos/farmacología , Bacterias/efectos de los fármacos , Celulosa/química , Celulosa/aislamiento & purificación , Medios de Cultivo , Gentamicinas/farmacología , Lactobacillaceae/aislamiento & purificación , Lactobacillaceae/metabolismo , Microscopía Electrónica de Rastreo , Polisacáridos Bacterianos/biosíntesis , Polisacáridos Bacterianos/química , Espectroscopía Infrarroja por Transformada de Fourier , Propiedades de Superficie , Difracción de Rayos X
8.
Carbohydr Polym ; 280: 119030, 2022 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-35027132

RESUMEN

Microbial polysaccharides as renewable bioproducts have attracted lots of attention in various industries. Hesan (Highly elastic Sanxan), an exopolysaccharide produced by a plasma mutagenic strain Sphingomonas sanxanigenens NX03, was characterized. It possessed the same monosaccharide composition as the original polysaccharide Sanxan produced from wild-type strain NX02, but significantly reduced acetyl and glyceryl contents. Textural analysis showed the springiness and cohesiveness of Hesan gel was much higher than Sanxan gel, and rheological behaviors indicated it possessed a lower loss factor, and its conformational transition temperatures at different concentrations were obviously lower than Sanxan gel and high-acyl gellan gel, which suggested that Hesan gel was highly elastic and temperature-sensitive. Additionally, Hesan gel could be efficiently produced through micro-aerobic static culture in shallow (10.46 ± 0.30 g/L) and deep liquids (3.21 ± 0.32 g/L), which was significantly different from the fermentation of other water-soluble polysaccharides. In short, this study characterizes a new mutant strain and its polysaccharide products.


Asunto(s)
Polisacáridos Bacterianos/química , Sphingomonas/metabolismo , Elasticidad , Fermentación , Hidrogeles/química , Monosacáridos/análisis , Mutación , Polisacáridos Bacterianos/biosíntesis , Reología , Sphingomonas/genética , Temperatura
9.
Sci Rep ; 12(1): 1383, 2022 01 26.
Artículo en Inglés | MEDLINE | ID: mdl-35082324

RESUMEN

Bacillus subtilis, a probiotic, has been applied in the medical, food, and feed industries among others. However, the mechanisms of its benefits to hosts are not yet fully understood. Here the characterization and bioactivities of an extracellular polymeric substance (EPS) from Bacillus subtilis were investigated to reveal its partial mechanisms and provide the theoretical basics for further development and utilization of Bacillus subtilis. In this study, the novel strain Bacillus subtilis xztubd1 (GenBank: MG458322.1) was isolated from a housefly's body, identified according to phenotypical and genotypical analyses, and found to produce large amounts of an EPS. Through ultraviolet spectroscopy and Fourier transform infrared spectroscopy (FTIR spectroscopy), the EPS was found to contain a variety of chemical functional groups, such as O-H groups, C=C, C=O, CH3, C-O-H and C-O-C bonds, and alpha-type pyranose. Furthermore, the in vitro antioxidant activity of the EPS on DPPH radicals at a concentration of 90 µg/ml was 62%; on the superoxide radical at a concentration of 90 µg/ml, this value was 75%; and on hydroxyl radicals at a concentration of 90 µg/ml, the activity was 54%. EPS also enhanced significantly phagocytosis, lysozyme activity in macrophages, IL-2 content in mice and inhibited dramatically the growth of HeLa cells. These results showed that the EPS with reductive groups have the strong capacity to scavenge reactive oxygen species (ROS), reinforce the immune system and inhibit the growth of cancer cell, which helps theirs hosts defence against many diseases, including inflammation and cancer. The EPS from Bacillus subtilis has the potential to be an anticancer and anti-inflammatory drug candidate in the pharmaceutical industries, which provide scientific evidence for the development and utilization of probiotic-derived medicines.


Asunto(s)
Antiinflamatorios/administración & dosificación , Antineoplásicos/administración & dosificación , Bacillus subtilis/aislamiento & purificación , Bacillus subtilis/metabolismo , Moscas Domésticas/microbiología , Polisacáridos Bacterianos/administración & dosificación , Probióticos/administración & dosificación , Animales , Animales no Consanguíneos , Antiinflamatorios/química , Antiinflamatorios/metabolismo , Antineoplásicos/química , Antineoplásicos/metabolismo , Antioxidantes/administración & dosificación , Antioxidantes/química , Antioxidantes/metabolismo , Proliferación Celular/efectos de los fármacos , Matriz Extracelular de Sustancias Poliméricas/química , Matriz Extracelular de Sustancias Poliméricas/metabolismo , Células HeLa , Humanos , Interleucina-2/metabolismo , Macrófagos/efectos de los fármacos , Macrófagos/enzimología , Masculino , Ratones , Muramidasa/metabolismo , Fagocitosis/efectos de los fármacos , Polisacáridos Bacterianos/biosíntesis , Probióticos/metabolismo , Transducción de Señal/efectos de los fármacos , Espectroscopía Infrarroja por Transformada de Fourier/métodos
10.
J Sci Food Agric ; 102(2): 862-867, 2022 Jan 30.
Artículo en Inglés | MEDLINE | ID: mdl-34173230

RESUMEN

BACKGROUND: As a natural food additive, exopolysaccharide (EPS) produced by Streptococcus thermophilus can improve product viscosity and texture. The protein EpsA is a putative pathway-specific transcriptional regulator for EPS biosynthesis in S. thermophilus. RESULTS: According to comparative analysis of EPS biosynthetic gene clusters, a conserved region of epsA (609 bp) was employed to design primer pair epsA-F/R as a molecular marker for the isolation of EPS-producing (EPS+ ) S. thermophilus. Two EPS+ S. thermophiles strains, AR333 and S-3, were band-positive, whereas Lactococcus lactis NZ9000 (non-EPS-producing, EPS- ), Lactobacillus casei LC2W (EPS+ ) and L. plantarum AR113 (EPS+ ) were negative by polymerase chain reaction (PCR) amplicon bands using the epsA probe. This indicated good specificity of the epsA probe to EPS+ S. thermophilus. Moreover, based on PCR screening with the epsA probe, 23 positive strains were isolated and identified as S. thermophilus from our microbial library and natural fermented milk with 141.3-309.2 mg L-1 of EPS production, demonstrating the validity of our molecular marker screening method. CONCLUSION: The designed molecular marker of epsA can rapidly screen EPS+ S. thermophilus, which has potential application in the dairy and other food industries. © 2021 Society of Chemical Industry.


Asunto(s)
Polisacáridos Bacterianos/biosíntesis , Streptococcus thermophilus/genética , Streptococcus thermophilus/aislamiento & purificación , Animales , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Bovinos , Productos Lácteos Cultivados/microbiología , Fermentación , Marcadores Genéticos , Familia de Multigenes , Streptococcus thermophilus/metabolismo
11.
Food Microbiol ; 102: 103924, 2022 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-34809950

RESUMEN

Exopolysaccharides production by 3 ropy strains of Lactobacillus delbrueckii subsp. bulgaricus of dairy origin was evaluated in synthetic medium by combining different approaches: impedometric measurements, fluorescent microscopy and flow cytometry analyses. The evaluation of ΔE by impedometric measurement (E%max-E%40h) allowed the detection of EPS production in synthetic medium, but the differences in EPS production kinetic was highlighted by flow cytometry analysis and fluorescent microcopy. This approach enabled us to unravel the diversity in EPS synthesis and release into the laboratory medium during the growth of the strains. Our results showed that the maximum EPS production occurred after 8 h of incubation, when cells were in late exponential growth phase. Furthermore, flow cytometry analysis revealed that only part of the cell population could be identified as EPS producer or as EPS-bounded cell. Therefore, the combined approach used, allowed us to define at the same time the kinetics of EPS production and release by three strains belonging to the same species and, highlight that the production of EPS depends also on the number of EPS-producing cells within the same population. This approach could be useful for the selection of strains to be used as starter cultures in dairy products where EPS production is considered an important feature.


Asunto(s)
Lactobacillus delbrueckii , Polisacáridos Bacterianos/biosíntesis , Medios de Cultivo , Productos Lácteos/microbiología , Fermentación , Lactobacillus delbrueckii/clasificación , Lactobacillus delbrueckii/metabolismo
12.
Nucleic Acids Res ; 50(1): 127-148, 2022 01 11.
Artículo en Inglés | MEDLINE | ID: mdl-34893884

RESUMEN

Serratia marcescens is a Gram-negative bacterium of the Enterobacteriaceae family that can produce numbers of biologically active secondary metabolites. However, our understanding of the regulatory mechanisms behind secondary metabolites biosynthesis in S. marcescens remains limited. In this study, we identified an uncharacterized LysR family transcriptional regulator, encoding gene BVG90_12635, here we named psrA, that positively controlled prodigiosin synthesis in S. marcescens. This phenotype corresponded to PsrA positive control of transcriptional of the prodigiosin-associated pig operon by directly binding to a regulatory binding site (RBS) and an activating binding site (ABS) in the promoter region of the pig operon. We demonstrated that L-proline is an effector for the PsrA, which enhances the binding affinity of PsrA to its target promoters. Using transcriptomics and further experiments, we show that PsrA indirectly regulates pleiotropic phenotypes, including serrawettin W1 biosynthesis, extracellular polysaccharide production, biofilm formation, swarming motility and T6SS-mediated antibacterial activity in S. marcescens. Collectively, this study proposes that PsrA is a novel regulator that contributes to antibiotic synthesis, bacterial virulence, cell motility and extracellular polysaccharides production in S. marcescens and provides important clues for future studies exploring the function of the PsrA and PsrA-like proteins which are widely present in many other bacteria.


Asunto(s)
Proteínas Bacterianas/genética , Biopelículas , Prodigiosina/biosíntesis , Serratia marcescens/genética , Factores de Transcripción/genética , Proteínas Bacterianas/metabolismo , Depsipéptidos/biosíntesis , Movimiento , Operón , Polisacáridos Bacterianos/biosíntesis , Regiones Promotoras Genéticas , Serratia marcescens/metabolismo , Serratia marcescens/patogenicidad , Factores de Transcripción/metabolismo
13.
J Biol Chem ; 298(1): 101486, 2022 01.
Artículo en Inglés | MEDLINE | ID: mdl-34896394

RESUMEN

Salmonella enterica serovar Typhi causes typhoid fever. It possesses a Vi antigen capsular polysaccharide coat that is important for virulence and is the basis of a current glycoconjugate vaccine. Vi antigen is also produced by environmental Bordetella isolates, while mammal-adapted Bordetella species (such as Bordetella bronchiseptica) produce a capsule of undetermined structure that cross-reacts with antibodies recognizing Vi antigen. The Vi antigen backbone is composed of poly-α-(1→4)-linked N-acetylgalactosaminuronic acid, modified with O-acetyl residues that are necessary for vaccine efficacy. Despite its biological and biotechnological importance, some central aspects of Vi antigen production are poorly understood. Here we demonstrate that TviE and TviD, two proteins encoded in the viaB (Vi antigen production) locus, interact and are the Vi antigen polymerase and O-acetyltransferase, respectively. Structural modeling and site-directed mutagenesis reveal that TviE is a GT4-family glycosyltransferase. While TviD has no identifiable homologs beyond Vi antigen systems in other bacteria, structural modeling suggests that it belongs to the large SGNH hydrolase family, which contains other O-acetyltransferases. Although TviD possesses an atypical catalytic triad, its O-acetyltransferase function was verified by antibody reactivity and 13C NMR data for tviD-mutant polysaccharide. The B. bronchiseptica genetic locus predicts a mode of synthesis distinct from classical S. enterica Vi antigen production, but which still involves TviD and TviE homologs that are both active in a reconstituted S. Typhi system. These findings provide new insight into Vi antigen production and foundational information for the glycoengineering of Vi antigen production in heterologous bacteria.


Asunto(s)
Polisacáridos Bacterianos , Salmonella typhi , Fiebre Tifoidea , Acetiltransferasas/metabolismo , Animales , Polisacáridos Bacterianos/biosíntesis , Polisacáridos Bacterianos/metabolismo , Salmonella typhi/metabolismo , Salmonella typhi/patogenicidad , Fiebre Tifoidea/microbiología , Fiebre Tifoidea/prevención & control , Virulencia
14.
mBio ; 12(6): e0324921, 2021 12 21.
Artículo en Inglés | MEDLINE | ID: mdl-34903052

RESUMEN

A major target of c-di-GMP signaling is the production of biofilm-associated extracellular polymeric substances (EPS), which in Escherichia coli K-12 include amyloid curli fibers, phosphoethanolamine-modified cellulose, and poly-N-acetylglucosamine. However, the characterized c-di-GMP-binding effector systems are largely outnumbered by the 12 diguanylate cyclases (DGCs) and 13 phosphodiesterases (PDEs), which synthetize and degrade c-di-GMP, respectively. E. coli possesses a single protein with a potentially c-di-GMP-binding MshEN domain, NfrB, which-together with the outer membrane protein NfrA-is known to serve as a receptor system for phage N4. Here, we show that NfrB not only binds c-di-GMP with high affinity but, as a novel c-di-GMP-controlled glycosyltransferase, synthesizes a secreted EPS, which can impede motility and is required as an initial receptor for phage N4 infection. In addition, a systematic screening of the 12 DGCs of E. coli K-12 revealed that specifically DgcJ is required for the infection with phage N4 and interacts directly with NfrB. This is in line with local signaling models, where specific DGCs and/or PDEs form protein complexes with particular c-di-GMP effector/target systems. Our findings thus provide further evidence that intracellular signaling pathways, which all use the same diffusible second messenger, can act in parallel in a highly specific manner. IMPORTANCE Key findings in model organisms led to the concept of "local" signaling, challenging the dogma of a gradually increasing global intracellular c-di-GMP concentration driving the motile-sessile transition in bacteria. In our current model, bacteria dynamically combine both global and local signaling modes, in which specific DGCs and/or PDEs team up with effector/target systems in multiprotein complexes. The present study highlights a novel example of how specificity in c-di-GMP signaling can be achieved by showing NfrB as a novel c-di-GMP binding effector in E. coli, which is controlled in a local manner specifically by DgcJ. We further show that NfrB (which was initially found as a part of a receptor system for phage N4) is involved in the production of a novel exopolysaccharide. Finally, our data shine new light on host interaction of phage N4, which uses this exopolysaccharide as an initial receptor for adsorption.


Asunto(s)
Proteínas de la Membrana Bacteriana Externa/metabolismo , Bacteriófago N4/fisiología , GMP Cíclico/análogos & derivados , Proteínas de Escherichia coli/metabolismo , Escherichia coli/virología , Glicosiltransferasas/metabolismo , Polisacáridos Bacterianos/biosíntesis , Proteínas de la Membrana Bacteriana Externa/genética , Bacteriófago N4/genética , GMP Cíclico/metabolismo , Escherichia coli/enzimología , Escherichia coli/genética , Escherichia coli/metabolismo , Proteínas de Escherichia coli/genética , Glicosiltransferasas/genética , Liasas de Fósforo-Oxígeno/genética , Liasas de Fósforo-Oxígeno/metabolismo , Receptores Virales/genética , Receptores Virales/metabolismo
15.
J Microbiol ; 59(12): 1092-1103, 2021 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-34865198

RESUMEN

As the functions of probiotics within the same species may not be shared, it is important to analyze the genetic characteristics of strains to determine their safety and usefulness before industrial applications. Hence the present study was undertaken to determine functional genes, and beneficial activities of strain LRCC5314, a bacterial strain isolated from kimchi through comparative genomic analysis. Phylogenetic analysis based on the 16S rRNA gene sequence showed that strain LRCC5314 was a member of the species L. plantarum. Whole genome size of strain LRCC5314 was sequence was 3.25 Mb long, with a G + C content of 44.5 mol% and 3,031 predicted genes. Strain LRCC5314 could metabolize hexoses through homofermentation, which produces only lactic acid from hexoses. According to gene annotation, strain LRCC-5314 contained genes of EPS production and CRISPR. Moreover, the strain contained genes that could encode a complete biosynthetic pathway for the production of tryptophan, which can be used as a precursor of serotonin. Notably, the tryptophan and serotonin activities strain LRCC5314 were higher than those of reference strains, L. plantarum ATCC 14917T, DSM 20246, DSM 2601, and ATCC 8014, which reach tryptophan amount of 0.784 ± 0.045 µM/ml in MRS broth and serotonin concentration of 19.075 ± 0.295 ng/ml in HT-22 cells. These findings indicated that L. plantarum LRCC5314 could provide a source for serotonin production and could be used as a functional probiotic for stress regulation.


Asunto(s)
Genes Bacterianos , Lactobacillus plantarum/genética , Lactobacillus plantarum/metabolismo , Serotonina/biosíntesis , Triptófano/metabolismo , Repeticiones Palindrómicas Cortas Agrupadas y Regularmente Espaciadas , Fermentación , Alimentos Fermentados/microbiología , Genoma Bacteriano , Lactobacillus plantarum/clasificación , Lactobacillus plantarum/aislamiento & purificación , Redes y Vías Metabólicas , Anotación de Secuencia Molecular , Filogenia , Polisacáridos Bacterianos/biosíntesis , Probióticos , Triptófano/biosíntesis , Triptófano/genética , Secuenciación Completa del Genoma
16.
Int J Biol Macromol ; 193(Pt B): 1226-1236, 2021 Dec 15.
Artículo en Inglés | MEDLINE | ID: mdl-34743029

RESUMEN

The present study emphasizes improving the overall yield, productivity and quality of xanthan by Xanthomonas campestris using different carbon sources via optimizing the fermentation media and kinetic modelling work. After optimization, six carbon sources and one nitrogen source were selected for xanthan production in 5 L bioreactor. Kinetic modelling was applied to assess the experimental fermentation data and to check its influence on scale-up production. In this work, xanthan production reached 40.65 g/L with a growth-associated rate constant (α) of 2.831, and highest specific growth rate (µm) of 0.37/h while using maltose as the sole carbon source. Furthermore, rheological properties were determined, and Herschel-Bulkley model was employed to assess the experimental data. Interestingly, xanthan obtained from sucrose and glucose showed the highest yield stress (τ0) of 12.50 ± 0.31 and 7.17 ± 0.21. Moreover, the highest xanthan molecular weight of 3.53 × 107 and 3.25 × 107 g/mol were also found with sucrose and glucose. At last, the proposed mechanism of sugar metabolism and xanthan biosynthesis pathway were described. Conclusively, maltose appeared as the best carbon source for maximum xanthan production: while sucrose and glucose gave qualitatively best results. In short, this systematically modelled approach maximizes the potential output and provides a solid base for continuous cultivation of xanthan at large-scale production.


Asunto(s)
Maltosa , Polisacáridos Bacterianos/biosíntesis , Xanthomonas campestris/crecimiento & desarrollo , Carbono/metabolismo , Carbono/farmacología , Maltosa/metabolismo , Maltosa/farmacología
17.
Food Funct ; 12(19): 9456-9465, 2021 Oct 04.
Artículo en Inglés | MEDLINE | ID: mdl-34606528

RESUMEN

Exopolysaccharides (EPSs) derived from Lactobacilli have important physiological effects and are commonly used as new prebiotics. We identified and studied a new Lactobacillus strain, YY-112, isolated from waxberry (Myrica rubra). This strain, identified as Lactobacillus pentosus, tolerates acids, bile salts, and artificial digestive fluids. The EPS derived from this strain weighed 5.9 × 104 Da and contained glucose, mannose, glucosamine, galactose, and rhamnose at 62.69 : 85.85 : 2.46 : 2.92 : 1.00 molar ratios. We found that the EPS from this strain increased the ratio of Bacteroidetes to Firmicutes and decreased the relative abundance of Proteobacteria, especially Escherichia-Shigella, when added to a simulated gastrointestinal system in vitro. After analysing the short-chain fatty acids, we found that this EPS promoted the production of acetic acid, propionic acid, and butyric acid, and reduced the ratio of acetic acid to propionic acid. We conclude that Lactobacillus pentosus YY-112 is a potential probiotic strain with EPS that is beneficial for the intestinal microbiota and short-chain fatty acid production.


Asunto(s)
Microbioma Gastrointestinal , Tracto Gastrointestinal/microbiología , Lactobacillus pentosus/metabolismo , Polisacáridos Bacterianos , Prebióticos , Bacteroidetes/crecimiento & desarrollo , Mejilla , Digestión , Ácidos Grasos Volátiles/metabolismo , Fermentación , Firmicutes/crecimiento & desarrollo , Tracto Gastrointestinal/metabolismo , Humanos , Técnicas In Vitro , Lactobacillus pentosus/clasificación , Filogenia , Polisacáridos Bacterianos/biosíntesis , Polisacáridos Bacterianos/química , Polisacáridos Bacterianos/aislamiento & purificación , Polisacáridos Bacterianos/metabolismo , Proteobacteria/crecimiento & desarrollo
18.
Int J Biol Macromol ; 192: 1331-1343, 2021 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-34673108

RESUMEN

Yak yogurt, one of the naturally fermented dairy products prepared by local herdsmen in the Qinghai-Tibet Plateau, contains a diverse array of microorganisms. We isolated and identified a novel Streptococcus thermophilus strain, ZJUIDS-2-01, from the traditional yak yogurt. We further purified and carried out detailed structural, physiochemical, and bioactivity studies of an exopolysaccharide (EPS-3A) produced by S. thermophilus ZJUIDS-2-01. The weight-average molecular weight (Mw) of EPS-3A was estimated to be 1.38 × 106 Da by High-Performance Gel Permeation Chromatography (HPGPC). The monosaccharide analysis established its composition to be glucose, galactose, N-acetyl-D-galactosamine, and rhamnose in a ratio of 5.2:2.5:6.4:1.0. The molecular structure of EPS-3A was determined by the combination of permethylation analysis, FT-IR, and NMR spectroscopic techniques. The ζ-potential measurements indicated that EPS-3A had a pKa value of ~4.40. The DSC yielded a melting point (Tm) of 80.4 °C and enthalpy change (ΔH) of 578 J/g for EPS-3A, comparable to those of the xanthan gum (XG), a commercial EPS. EPS-3A exhibited better O/W emulsion stability and flocculating capacity than XG. Furthermore, it also demonstrated similar antioxidant activity to XG and promising in vitro antibacterial properties. This work evidenced that EPS-3A derived from S. thermophilus ZJUIDS-2-01 holds the potential for food and industrial applications.


Asunto(s)
Polisacáridos Bacterianos/química , Polisacáridos Bacterianos/aislamiento & purificación , Streptococcus thermophilus/metabolismo , Yogur/análisis , Antibacterianos/química , Antibacterianos/farmacología , Fraccionamiento Químico , Fenómenos Químicos , Depuradores de Radicales Libres/química , Depuradores de Radicales Libres/aislamiento & purificación , Depuradores de Radicales Libres/farmacología , Cromatografía de Gases y Espectrometría de Masas , Pruebas de Sensibilidad Microbiana , Estructura Molecular , Monosacáridos , Polisacáridos Bacterianos/biosíntesis , Polisacáridos Bacterianos/farmacología , Análisis Espectral , Relación Estructura-Actividad , Yogur/microbiología
19.
Biochemistry ; 60(37): 2836-2843, 2021 09 21.
Artículo en Inglés | MEDLINE | ID: mdl-34505775

RESUMEN

Campylobacter jejuni is a Gram-negative, pathogenic bacterium that causes campylobacteriosis, a form of gastroenteritis. C. jejuni is the most frequent cause of food-borne illness in the world, surpassing Salmonella and E. coli. Coating the surface of C. jejuni is a layer of sugar molecules known as the capsular polysaccharide that, in C. jejuni NCTC 11168, is composed of a repeating unit of d-glycero-l-gluco-heptose, d-glucuronic acid, d-N-acetyl-galactosamine, and d-ribose. The d-glucuronic acid moiety is further amidated with either serinol or ethanolamine. It is unknown how these modifications are synthesized and attached to the polysaccharide. Here, we report the catalytic activities of two previously uncharacterized, pyridoxal phosphate (PLP)-dependent enzymes, Cj1436 and Cj1437, from C. jejuni NCTC 11168. Using a combination of mass spectrometry and nuclear magnetic resonance, we determined that Cj1436 catalyzes the decarboxylation of l-serine phosphate to ethanolamine phosphate. Cj1437 was shown to catalyze the transamination of dihydroxyacetone phosphate to (S)-serinol phosphate in the presence of l-glutamate. The probable routes to the ultimate formation of the glucuronamide substructures in the capsular polysaccharides of C. jejuni are discussed.


Asunto(s)
Cápsulas Bacterianas/enzimología , Cápsulas Bacterianas/metabolismo , Campylobacter jejuni/enzimología , Cápsulas Bacterianas/genética , Proteínas Bacterianas/química , Infecciones por Campylobacter/microbiología , Campylobacter jejuni/metabolismo , Metabolismo de los Hidratos de Carbono , Heptosas/biosíntesis , Polisacáridos/biosíntesis , Polisacáridos Bacterianos/biosíntesis , Polisacáridos Bacterianos/genética , Polisacáridos Bacterianos/metabolismo , Fosfato de Piridoxal/metabolismo
20.
Carbohydr Polym ; 270: 118350, 2021 Oct 15.
Artículo en Inglés | MEDLINE | ID: mdl-34364598

RESUMEN

In this study, bacterial cellulose was synthesized by Taonella mepensis from traditional Chinese medicinal herb residues hydrolysate. To overcome the inhibitory effect of fermentation environment, in-situ fermentation with gellan gum adding was carried out for the first time. After 10 days' static fermentation, both high-acyl gellan gum and low-acyl gellan gum adding showed certain beneficial effects for bacterial cellulose production that the highest bacterial cellulose yield (0.866 and 0.798 g/L, respectively) was 59% and 47% higher than that (0.543 g/L) without gellan gum adding. Besides, gellan gum based bacterial cellulose showed some better texture characteristics. Gellan gum was loaded in the nano network of bacterial cellulose, and gellan gum adding had some influence on the crystal structure and thermal degradation behaviors of bacterial cellulose but affected little on its functional groups. Overall, this in-situ fermentation technology is attractive for bacterial cellulose production from low-cost but inhibitory substrates.


Asunto(s)
Celulosa/biosíntesis , Polisacáridos Bacterianos/biosíntesis , Rhodospirillaceae/metabolismo , Celulosa/química , China , Fermentación , Hidrólisis , Medicina Tradicional China , Microscopía Electrónica de Rastreo/métodos , Plantas Medicinales/química , Polisacáridos Bacterianos/química , Espectroscopía Infrarroja por Transformada de Fourier/métodos
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