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1.
Metab Eng ; 54: 69-82, 2019 07.
Artículo en Inglés | MEDLINE | ID: mdl-30914380

RESUMEN

Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV) is a promising biopolyester with good mechanical properties and biodegradability. Large-scale production of PHBV is still hindered by the high production cost. CRISPR/Cas9 method was used to engineer the TCA cycle in Halomonas bluephagenesis on its chromosome for production of PHBV from glucose as a sole carbon source. Two TCA cycle related genes sdhE and icl encoding succinate dehydrogenase assembly factor 2 and isocitrate lysase were deleted, respectively, in H. bluephagenesis TD08AB containing PHBV synthesis genes on the chromosome, to channel more flux to increase the 3-hydroxyvalerate (3HV) ratio of PHBV. Due to a poor growth behavior of the mutant strains, H. bluephagenesis TY194 equipped with a medium strength Pporin-194 promoter was selected for further studies. The sdhE and/or icl mutant strains of H. bluephagenesis TY194 were constructed to show enhanced cell growth, PHBV synthesis and 3HV molar ratio. Gluconate was used to activate ED pathway and thus TCA cycle to increase 3HV content. H. bluephagenesis TY194 (ΔsdhEΔicl) was found to synthesize 17mol% 3HV in PHBV. Supported by the synergetic function of phosphoenolpyruvate carboxylase and Vitreoscilla hemoglobin encoded by genes ppc and vgb inserted into the chromosome of H. bluephagenesis TY194 (ΔsdhE) serving to enhance TCA cycle activity, a series of strains were generated that could produce PHBV containing 3-18mol% 3HV using glucose as a sole carbon source. Shake flask studies showed that H. bluephagenesis TY194 (ΔsdhE, G7::Pporin-ppc) produced 6.3 g/L cell dry weight (CDW), 65% PHBV in CDW and 25mol% 3HV in PHBV when grown in glucose and gluconate. 25mol% 3HV was the highest reported via chromosomal expression system. PHBV copolymers with different 3HV molar ratios were extracted and characterized. Next-generation industrial biotechnology (NGIB) based on recombinant H. bluephagenesis grown under unsterile and continuous conditions, allows production of P(3HB-0∼25mol% 3HV) in a convenient way with reduced production complexity and cost.


Asunto(s)
Cromosomas Bacterianos , Ciclo del Ácido Cítrico/genética , Ingeniería Genética , Halomonas , Poliésteres/metabolismo , Ácido 3-Hidroxibutírico/genética , Ácido 3-Hidroxibutírico/metabolismo , Cromosomas Bacterianos/genética , Cromosomas Bacterianos/metabolismo , Halomonas/genética , Halomonas/metabolismo , Ácidos Pentanoicos/metabolismo
2.
Biomacromolecules ; 20(9): 3303-3312, 2019 09 09.
Artículo en Inglés | MEDLINE | ID: mdl-31094501

RESUMEN

Synthetic organogels/hydrogels are attracting growing interests due to their potential applications in biomedical fields, organic electronics, and photovoltaics. Photogelation methods for synthesis of organogels/hydrogels have been shown particularly promising because of the high efficiency and simple synthetic procedures. This study synthesized new biodegradable polyhydroxyalkanoates (PHA)-based organogels/hydrogels via UV photo-cross-linking using unsaturated PHA copolymer poly[(R)-3-hydroxyundecanoate-co-(R)-3-hydroxy-10-undecenoate] (PHU10U) with polyethylene glycol dithiol (PDT) as a photo-cross-linker. The PHU10U was synthesized by an engineered Pseudomonas entomophila and characterized via Fourier transform infrared spectroscopy, 1H nuclear magnetic resonance (NMR), and 13C NMR. With decreasing the molar ratio of PHU10U to PDT, both the swelling ratio and pore size were decreased. Meanwhile, increasing densities of the gel networks resulted in a higher compressive modulus. Cell cytotoxicity studies based on the CCK-8 assay on both the PHU10U precursor and PHU10U/PDT hydrogels showed that the novel PHA-based biodegradables acting as hydrogels possess good biocompatibility.


Asunto(s)
Materiales Biocompatibles/química , Plásticos Biodegradables/química , Hidrogeles/química , Polihidroxialcanoatos/biosíntesis , Materiales Biocompatibles/farmacología , Materiales Biocompatibles/efectos de la radiación , Plásticos Biodegradables/farmacología , Supervivencia Celular/efectos de los fármacos , Humanos , Hidrogeles/síntesis química , Hidrogeles/efectos de la radiación , Espectroscopía de Resonancia Magnética , Estructura Molecular , Polihidroxialcanoatos/química , Polihidroxialcanoatos/efectos de la radiación , Polímeros/química , Polímeros/efectos de la radiación , Rayos Ultravioleta , Ácidos Undecilénicos/química , Ácidos Undecilénicos/efectos de la radiación
3.
Metab Eng ; 47: 143-152, 2018 05.
Artículo en Inglés | MEDLINE | ID: mdl-29551476

RESUMEN

Poly(3-hydroxybutyrate-co-4-hydroxybutyrate) [P(3HB-co-4HB)] is one of the most promising biomaterials expected to be used in a wide range of scenarios. However, its large-scale production is still hindered by the high cost. Here we report the engineering of Halomonas bluephagenesis as a low-cost platform for non-sterile and continuous fermentative production of P(3HB-co-4HB) from glucose. Two interrelated 4-hydroxybutyrate (4HB) biosynthesis pathways were constructed to guarantee 4HB monomer supply for P(3HB-co-4HB) synthesis by working in concert with 3-hydroxybutyrate (3HB) pathway. Interestingly, only 0.17 mol% 4HB in the copolymer was obtained during shake flask studies. Pathway debugging using structurally related carbon source located the failure as insufficient 4HB accumulation. Further whole genome sequencing and comparative genomic analysis identified multiple orthologs of succinate semialdehyde dehydrogenase (gabD) that may compete with 4HB synthesis flux in H. bluephagenesis. Accordingly, combinatory gene-knockout strains were constructed and characterized, through which the molar fraction of 4HB was increased by 24-fold in shake flask studies. The best-performing strain was grown on glucose as the single carbon source for 60 h under non-sterile conditions in a 7-L bioreactor, reaching 26.3 g/L of dry cell mass containing 60.5% P(3HB-co-17.04 mol%4HB). Besides, 4HB molar fraction in the copolymer can be tuned from 13 mol% to 25 mol% by controlling the residual glucose concentration in the cultures. This is the first study to achieve the production of P(3HB-co-4HB) from only glucose using Halomonas.


Asunto(s)
Glucosa , Halomonas , Hidroxibutiratos/metabolismo , Ingeniería Metabólica , Poliésteres/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Glucosa/genética , Glucosa/metabolismo , Halomonas/genética , Halomonas/metabolismo , Succionato-Semialdehído Deshidrogenasa/genética , Succionato-Semialdehído Deshidrogenasa/metabolismo
4.
Appl Microbiol Biotechnol ; 100(23): 9907-9916, 2016 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-27401924

RESUMEN

E. coli JM109∆envC∆nlpD deleted with genes envC and nlpD responsible for degrading peptidoglycan (PG) led to long filamentous cell shapes. When cell fission ring location genes minC and minD of Escherichia coli were deleted, E. coli JM109∆minCD changed the cell growth pattern from binary division to multiple fissions. Bacterial morphology can be further engineered by overexpressing sulA gene resulting in inhibition on FtsZ, thus generating very long cellular filaments. By overexpressing sulA in E. coli JM109∆envC∆nlpD and E. coli JM109∆minCD harboring poly(3-hydroxybutyrate) (PHB) synthesis operon phbCAB encoded in plasmid pBHR68, respectively, both engineered cells became long filaments and accumulated more PHB compared with the wild-type. Under same shake flask growth conditions, E. coli JM109∆minCD (pBHR68) overexpressing sulA grown in multiple fission pattern accumulated approximately 70 % PHB in 9 g/L cell dry mass (CDM), which was significantly higher than E. coli JM109∆envC∆nlpD and the wild type, that produced 7.6 g/L and 8 g/L CDM containing 64 % and 51 % PHB, respectively. Results demonstrated that a combination of the new division pattern with elongated shape of E. coli improved PHB production. This provided a new vision on the enhanced production of inclusion bodies.


Asunto(s)
Escherichia coli/citología , Escherichia coli/metabolismo , Hidroxibutiratos/metabolismo , Ingeniería Metabólica , Poliésteres/metabolismo , Pared Celular/metabolismo , Escherichia coli/genética , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Eliminación de Gen , Expresión Génica , Redes y Vías Metabólicas/genética
5.
Metab Eng ; 29: 160-168, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25838211

RESUMEN

Clustered regularly interspaced short palindromic repeats interference (CRISPRi) is used to edit eukaryotic genomes. Here, we show that CRISPRi can also be used for fine-tuning prokaryotic gene expression while simultaneously regulating multiple essential gene expression with less labor and time consumption. As a case study, CRISPRi was used to control polyhydroxyalkanoate (PHA) biosynthesis pathway flux and to adjust PHA composition. A pathway was constructed in Escherichia coli for the production of poly(3-hydroxybutyrate-co-4-hydroxybutyrate) [P(3HB-co-4HB)] from glucose. The native gene sad encoding E. coli succinate semi-aldehyde dehydrogenase was expressed under the control of CRISPRi using five specially designed single guide RNAs (sgRNAs) for regulating carbon flux to 4-hydroxybutyrate (4HB) biosynthesis. The system allowed formation of P(3HB-co-4HB) consisting of 1-9mol% 4HB. Additionally, succinate, generated by succinyl-coA synthetase and succinate dehydrogenase (respectively encoded by genes sucC, sucD and sdhA, sdhB) was channeled preferentially to the 4HB precursor by using selected sgRNAs such as sucC2, sucD2, sdhB2 and sdhA1 via CRISPRi. The resulting 4HB content in P(3HB-co-4HB) was found to range from 1.4 to 18.4mol% depending on the expression levels of down-regulated genes. The results show that CRISPRi is a feasible method to simultaneously manipulate multiple genes in E. coli.


Asunto(s)
Sistemas CRISPR-Cas , Proteínas de Escherichia coli , Escherichia coli , Hidroxibutiratos/metabolismo , Ingeniería Metabólica , Poliésteres/metabolismo , Escherichia coli/enzimología , Escherichia coli/genética , Proteínas de Escherichia coli/biosíntesis , Proteínas de Escherichia coli/genética
6.
Metab Eng ; 29: 189-195, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25842374

RESUMEN

Poly(3-hydroxypropionate) (P3HP) is the strongest family member of microbial polyhydroxyalkanoates (PHA) synthesized by bacteria grown on 1,3-propandiol or glycerol. In this study synthesis pathways of P3HP and its copolymer P3HB3HP of 3-hydroxybutyrate (3HB) and 3-hydroxypropionate (3HP) were assembled respectively to allow their synthesis from glucose, a more abundant carbon source. Recombinant Escherichia coli was constructed harboring the P3HP synthetic pathway consisting of heterologous genes encoding glycerol-3-phosphate dehydrogenase (gpd1), glycerol-3-P phosphatase (gpp2) from Saccharomyces cerevisiae that catalyzes formation of glycerol from glucose, and genes coding glycerol dehydratase (dhaB123) with its reactivating factors (gdrAB) from Klebsiella pneumoniae that transfer glycerol to 3-hydroxypropionaldehyde, as well as gene encoding propionaldehyde dehydrogenase (pdup) from Salmonella typhimurium which converts 3-hydroxypropionaldehyde to 3-hydroxypropionyl-CoA, together with the gene of PHA synthase (phaC) from Ralstonia eutropha which polymerizes 3-hydroxypropionyl-CoA into P3HP. When phaA and phaB from Ralstonia eutropha respectively encoding ß-ketothiolase and acetoacetate reductase, were introduced into the above P3HP producing recombinant E. coli, copolymers poly(3-hydroxybutyrate-co-3-hydroxypropionate) (P3HB3HP) were synthesized from glucose as a sole carbon source. The above E. coli recombinants grown on glucose LB medium successfully produced 5g/L cell dry weight containing 18% P3HP and 42% P(3HB-co-84mol% 3HP), respectively, in 48h shake flask studies.


Asunto(s)
Proteínas Bacterianas , Cupriavidus necator/genética , Escherichia coli , Glucosa/metabolismo , Hidroxibutiratos/metabolismo , Ingeniería Metabólica , Poliésteres/metabolismo , Proteínas de Saccharomyces cerevisiae , Saccharomyces cerevisiae/genética , Proteínas Bacterianas/biosíntesis , Proteínas Bacterianas/genética , Cupriavidus necator/enzimología , Escherichia coli/genética , Escherichia coli/metabolismo , Glucosa/genética , Saccharomyces cerevisiae/enzimología , Proteínas de Saccharomyces cerevisiae/biosíntesis , Proteínas de Saccharomyces cerevisiae/genética
7.
Metab Eng ; 23: 78-91, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24566041

RESUMEN

Genetic engineering of Halomonas spp. was seldom reported due to the difficulty of genetic manipulation and lack of molecular biology tools. Halomonas TD01 can grow in a continuous and unsterile process without other microbial contaminations. It can be therefore exploited for economic production of chemicals. Here, Halomonas TD01 was metabolically engineered using the gene knockout procedure based on markerless gene replacement stimulated by double-strand breaks in the chromosome. When gene encoding 2-methylcitrate synthase in Halomonas TD01 was deleted, the conversion efficiency of propionic acid to 3-hydroxyvalerate (3HV) monomer fraction in random PHBV copolymers of 3-hydroxybutyrate (3HB) and 3HV was increased from around 10% to almost 100%, as a result, cells were grown to accumulate 70% PHBV in dry weight (CDW) consisting of 12mol% 3HV from 0.5g/L propionic acid in glucose mineral medium. Furthermore, successful deletions on three PHA depolymerases eliminate the possible influence of PHA depolymerases on PHA degradation in the complicated industrial fermentation process even though significant enhanced PHA content was not observed. In two 500L pilot-scale fermentor studies lasting 70h, the above engineered Halomonas TD01 grew to 112g/L CDW containing 70wt% P3HB, and to 80g/L CDW with 70wt% P(3HB-co-8mol% 3HV) in the presence of propionic acid. The cells grown in shake flasks even accumulated close to 92% PHB in CDW with a significant increase of glucose to PHB conversion efficiency from around 30% to 42% after 48h cultivation when pyridine nucleotide transhydrogenase was overexpressed. Halomonas TD01 was also engineered for producing a PHA regulatory protein PhaR which is a robust biosurfactant.


Asunto(s)
Halomonas , Ingeniería Metabólica/métodos , Poliésteres/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Técnicas de Silenciamiento del Gen , Halomonas/genética , Halomonas/metabolismo
8.
Appl Microbiol Biotechnol ; 98(24): 10013-21, 2014 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-25216582

RESUMEN

Micro-aeration is a situation that will be encountered in bacterial cell growth especially when the saturated dissolved oxygen level cannot match the demand from cells grown to a high density. Therefore, it is desirable to separate aerobic growth and micro-aerobic product formation into two stages using methods including anaerobic or micro-aerobic promoters that are inducible under low aeration intensity. Eleven potential low aeration-inducible promoters were cloned and studied for their induction strengths under micro-aerobic conditions. Of them, Vitreoscilla hemoglobin promoter (P vgb ) was found to be the strongest among all 11 promoters. At the same time, six E. coli hosts harboring poly(R-3-hydroxybutyrate) (PHB) synthesis operon phaCAB were compared for their ability to accumulate poly(hydroxyalkanoates) (PHA). E. coli S17-1 was demonstrated to be the best host achieving a 70 % (mass fraction) PHB in the cell dry weigh (CDW) after 48 h under micro-aerobic growth. Cascaded P vgb repeats (P nvgb ) were investigated for enhanced expression level under micro-aerobic growth. The highest PHA production was obtained when a promoter containing eight cascaded P vgb repeats (P 8vgb ) was used, 5.37 g/l CDW containing 90 % PHB was obtained from recombinant in E. coli S17-1. Cells grew further to 6.30 g/l CDW containing 91 % PHB when oxygen-responsive transcription factor ArcA (arcA) was deleted in the same recombinant E. coli S17-1. This study revealed that vgb promoter containing cascaded P vgb repeats (P 8vgb ) is useful for product formation under low aeration intensity.


Asunto(s)
Proteínas Bacterianas/genética , Escherichia coli/crecimiento & desarrollo , Escherichia coli/metabolismo , Hemoproteínas/genética , Hidroxibutiratos/metabolismo , Ingeniería Metabólica , Poliésteres/metabolismo , Aerobiosis , Anaerobiosis , Proteínas de la Membrana Bacteriana Externa/genética , Escherichia coli/genética , Proteínas de Escherichia coli/genética , Eliminación de Gen , Regiones Promotoras Genéticas , Proteínas Represoras/genética , Vitreoscilla/genética
9.
Biomacromolecules ; 14(3): 862-70, 2013 Mar 11.
Artículo en Inglés | MEDLINE | ID: mdl-23351169

RESUMEN

Poly(4-hydroxybutyrate) (P4HB) is a highly elastic polymer, whereas poly(3-hydroxypropionate) (P3HP) is a polymer with enormous tensile strength. This study aimed to biosynthesize a block copolymer consisting of soft P4HB block with a strong P3HP block to gain unique and excellent material properties. A recombinant Escherichia coli strain that produces homopolymers of P3HP and P4HB was employed for the block copolymer synthesis. When the strain was grown in the presence of 1,4-butanediol (BDO) as a 4HB precursor, P4HB block was formed. Sequential supplementation of 1,3-propanediol (PDO) as a 3HP precursor allowed the strain to produce P3HP block. Thermal, NMR, fractionation, and mechanical characterizations confirmed the resulting polymer as a block copolymer of P3HP-b-P4HB. Two block copolymers were formed from this study, including the P3HP-b-29% P4HB and P3HP-b-37% P4HB, they showed superior properties over random copolymers P(3HP-co-4HB). The block copolymers had two glass transition temperatures (Tg) and two melting temperatures (Tm). In comparison to the homopolymers P3HP and P4HB, incorporation of block microstructure resulted in the lowering of Tm, block copolymers were revealed with higher Young's modulus, yield strengths, and tension strengths much better than the previously reported random copolymers of similar compositions. Block copolymerization of P3HP and P4HB adds a new vision on PHA polymerization by generation of new polymers with superior properties.


Asunto(s)
Escherichia coli/metabolismo , Poliésteres/metabolismo , Polímeros/metabolismo , Butileno Glicoles/química , Espectroscopía de Resonancia Magnética , Peso Molecular , Poliésteres/aislamiento & purificación , Glicoles de Propileno/química , Temperatura
10.
Metab Eng ; 14(5): 496-503, 2012 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-22842473

RESUMEN

Recombinant Escherichia coli was constructed for co-production of hydrogen and polyhydroxybutyrate (PHB) due to its rapid growth and convenience of genetic manipulation. In particular, anaerobic metabolic pathways dedicated to co-production of hydrogen and PHB were established due to the advantages of directing fluxes away from toxic compounds such as formate and acetate to useful products. Here, recombinant E. coli expressing hydrogenase 3 and/or acetyl-CoA synthetase showed improved PHB and hydrogen production when grown with or without acetate as a carbon source. When hydrogenase 3 was over-expressed, hydrogen yield was increased from 14 to 153 mmol H(2)/mol glucose in a mineral salt (MS) medium with glucose as carbon source, accompanied by an increased PHB yield from 0.55 to 5.34 mg PHB/g glucose in MS medium with glucose and acetate as carbon source.


Asunto(s)
Acetato CoA Ligasa , Proteínas de Escherichia coli , Escherichia coli , Hidrógeno/metabolismo , Hidrogenasas , Hidroxibutiratos/metabolismo , Poliésteres/metabolismo , Acetato CoA Ligasa/biosíntesis , Acetato CoA Ligasa/genética , Escherichia coli/enzimología , Escherichia coli/genética , Escherichia coli/crecimiento & desarrollo , Proteínas de Escherichia coli/biosíntesis , Proteínas de Escherichia coli/genética , Expresión Génica , Hidrogenasas/biosíntesis , Hidrogenasas/genética , Ingeniería Metabólica/métodos
11.
Metab Eng ; 14(4): 317-24, 2012 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-22561235

RESUMEN

Copolyesters of 3-hydroxypropionate (3HP) and 4-hydroxybutyrate (4HB), abbreviated as P(3HP-co-4HB), was synthesized by Escherichia coli harboring a synthetic pathway consisting of five heterologous genes including orfZ encoding 4-hydroxybutyrate-coenzyme A transferase from Clostridium kluyveri, pcs' encoding the ACS domain of tri-functional propionyl-CoA ligase (PCS) from Chloroflexus aurantiacus, dhaT and aldD encoding dehydratase and aldehyde dehydrogenase from Pseudomonas putida KT2442, and phaC1 encoding PHA synthase from Ralstonia eutropha. When grown on mixtures of 1,3-propanediol (PDO) and 1,4-butanediol (BDO), compositions of 4HB in microbial P(3HP-co-4HB) were controllable ranging from 12 mol% to 82 mol% depending on PDO/BDO ratios. Nuclear magnetic resonance (NMR) spectra clearly indicated the polymers were random copolymers of 3HP and 4HB. Their mechanical and thermal properties showed obvious changes depending on the monomer ratios. Morphologically, P(3HP-co-4HB) films only became fully transparent when monomer 4HB content was around 67 mol%. For the first time, P(3HP-co-4HB) with adjustable monomer ratios were produced and characterized.


Asunto(s)
Ingeniería Metabólica/métodos , Poliésteres/metabolismo , Aldehído Deshidrogenasa/genética , Aldehído Deshidrogenasa/metabolismo , Butileno Glicoles/metabolismo , Coenzima A Ligasas/genética , Coenzima A Ligasas/metabolismo , Coenzima A Transferasas/genética , Coenzima A Transferasas/metabolismo , Escherichia coli/enzimología , Escherichia coli/genética , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Hidroliasas/genética , Hidroliasas/metabolismo , Glicoles de Propileno/metabolismo
12.
Microb Cell Fact ; 11: 44, 2012 Apr 05.
Artículo en Inglés | MEDLINE | ID: mdl-22480145

RESUMEN

BACKGROUND: Block polyhydroxyalkanoates (PHA) were reported to be resistant against polymer aging that negatively affects polymer properties. Recently, more and more attempts have been directed to make PHA block copolymers. Diblock copolymers PHB-b-PHHx consisting of poly-3-hydroxybutyrate (PHB) block covalently bonded with poly-3-hydroxyhexanoate (PHHx) block were for the first time produced successfully by a recombinant Pseudomonas putida KT2442 with its ß-oxidation cycle deleted to its maximum. RESULTS: The chloroform extracted polymers were characterized by nuclear magnetic resonance (NMR), thermo- and mechanical analysis. NMR confirmed the existence of diblock copolymers consisting of 58 mol% PHB as the short chain length block with 42 mol% PHHx as the medium chain length block. The block copolymers had two glass transition temperatures (Tg) at 2.7°C and -16.4°C, one melting temperature (Tm) at 172.1°C and one cool crystallization temperature (Tc) at 69.1°C as revealed by differential scanning calorimetry (DSC), respectively. This is the first microbial short-chain-length (scl) and medium-chain-length (mcl) PHA block copolymer reported. CONCLUSIONS: It is possible to produce PHA block copolymers of various kinds using the recombinant Pseudomonas putida KT2442 with its ß-oxidation cycle deleted to its maximum. In comparison to a random copolymer poly-3-hydroxybutyrate-co-3-hydroxyhexanoate (P(HB-co-HHx)) and a blend sample of PHB and PHHx, the PHB-b-PHHx showed improved structural related mechanical properties.


Asunto(s)
Caproatos/metabolismo , Hidroxibutiratos/metabolismo , Poliésteres/metabolismo , Polímeros/metabolismo , Pseudomonas putida/metabolismo , Caproatos/química , Hidroxibutiratos/química , Estructura Molecular , Oxidación-Reducción , Poliésteres/química , Polímeros/química , Pseudomonas putida/genética
13.
Microb Cell Fact ; 11: 130, 2012 Sep 14.
Artículo en Inglés | MEDLINE | ID: mdl-22978778

RESUMEN

BACKGROUND: Microbial polyhydroxyalkanoates (PHA) are biopolyesters consisting of diverse monomers. PHA synthase PhaC2Ps cloned from Pseudomonas stutzeri 1317 is able to polymerize short-chain-length (scl) 3-hydroxybutyrate (3HB) monomers and medium-chain-length (mcl) 3-hydroxyalkanoates (3HA) with carbon chain lengths ranging from C6 to C12. However, the scl and mcl PHA production in Escherichia coli expressing PhaC2Ps is limited with very low PHA yield. RESULTS: To improve the production of PHA with a wide range of monomer compositions in E. coli, a series of optimization strategies were applied on the PHA synthase PhaC2Ps. Codon optimization of the gene and mRNA stabilization with a hairpin structure were conducted and the function of the optimized PHA synthase was tested in E. coli. The transcript was more stable after the hairpin structure was introduced, and western blot analysis showed that both codon optimization and hairpin introduction increased the protein expression level. Compared with the wild type PhaC2Ps, the optimized PhaC2Ps increased poly-3-hydroxybutyrate (PHB) production by approximately 16-fold to 30% of the cell dry weight. When grown on dodecanoate, the recombinant E. coli harboring the optimized gene phaC2PsO with a hairpin structure in the 5' untranslated region was able to synthesize 4-fold more PHA consisting of 3HB and medium-chain-length 3HA compared to the recombinant harboring the wild type phaC2Ps. CONCLUSIONS: The levels of both PHB and scl-mcl PHA in E. coli were significantly increased by series of optimization strategies applied on PHA synthase PhaC2Ps. These results indicate that strategies including codon optimization and mRNA stabilization are useful for heterologous PHA synthase expression and therefore enhance PHA production.


Asunto(s)
Aciltransferasas/metabolismo , Proteínas Bacterianas/metabolismo , Escherichia coli/metabolismo , Ácido 3-Hidroxibutírico/metabolismo , Aciltransferasas/genética , Proteínas Bacterianas/genética , Hidroxibutiratos/metabolismo , Mutación , Poliésteres/metabolismo , Polihidroxialcanoatos/biosíntesis , Pseudomonas stutzeri/enzimología , ARN Mensajero/metabolismo , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética
14.
Microb Cell Fact ; 11: 54, 2012 May 02.
Artículo en Inglés | MEDLINE | ID: mdl-22550959

RESUMEN

BACKGROUND: Poly(4-hydroxybutyrate) [poly(4HB)] is a strong thermoplastic biomaterial with remarkable mechanical properties, biocompatibility and biodegradability. However, it is generally synthesized when 4-hydroxybutyrate (4HB) structurally related substrates such as γ-butyrolactone, 4-hydroxybutyrate or 1,4-butanediol (1,4-BD) are provided as precursor which are much more expensive than glucose. At present, high production cost is a big obstacle for large scale production of poly(4HB). RESULTS: Recombinant Escherichia coli strain was constructed to achieve hyperproduction of poly(4-hydroxybutyrate) [poly(4HB)] using glucose as a sole carbon source. An engineering pathway was established in E. coli containing genes encoding succinate degradation of Clostridium kluyveri and PHB synthase of Ralstonia eutropha. Native succinate semialdehyde dehydrogenase genes sad and gabD in E. coli were both inactivated to enhance the carbon flux to poly(4HB) biosynthesis. Four PHA binding proteins (PhaP or phasins) including PhaP1, PhaP2, PhaP3 and PhaP4 from R. eutropha were heterologously expressed in the recombinant E. coli, respectively, leading to different levels of improvement in poly(4HB) production. Among them PhaP1 exhibited the highest capability for enhanced polymer synthesis. The recombinant E. coli produced 5.5 g L(-1) cell dry weight containing 35.4% poly(4HB) using glucose as a sole carbon source in a 48 h shake flask growth. In a 6-L fermentor study, 11.5 g L(-1) cell dry weight containing 68.2% poly(4HB) was obtained after 52 h of cultivation. This was the highest poly(4HB) yield using glucose as a sole carbon source reported so far. Poly(4HB) was structurally confirmed by gas chromatographic (GC) as well as (1)H and (13)C NMR studies. CONCLUSIONS: Significant level of poly(4HB) biosynthesis from glucose can be achieved in sad and gabD genes deficient strain of E. coli JM109 harboring an engineering pathway encoding succinate degradation genes and PHB synthase gene, together with expression of four PHA binding proteins PhaP or phasins, respectively. Over 68% poly(4HB) was produced in a fed-batch fermentation process, demonstrating the feasibility for enhanced poly(4HB) production using the recombinant strain for future cost effective commercial development.


Asunto(s)
Escherichia coli/metabolismo , Glucosa/metabolismo , Poliésteres/metabolismo , Aciltransferasas/genética , Aciltransferasas/metabolismo , Clostridium kluyveri/metabolismo , Cupriavidus necator/enzimología , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Fermentación , Redes y Vías Metabólicas , Plásmidos/genética , Plásmidos/metabolismo , Poliésteres/química , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética , Succionato-Semialdehído Deshidrogenasa/genética , Succionato-Semialdehído Deshidrogenasa/metabolismo , Ácido Succínico/metabolismo
15.
Metab Eng ; 13(6): 777-85, 2011 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-22024131

RESUMEN

Conversion of 3-hydroxypropionate (3HP) from 1,3-propanediol (PDO) was improved by expressing dehydratase gene (dhaT) and aldehyde dehydrogenase gene (aldD) of Pseudomonas putida KT2442 under the promoter of phaCAB operon from Ralstonia eutropha H16. Expression of these genes in Aeromonas hydrophila 4AK4 produced up to 21 g/L 3HP in a fermentation process. To synthesize homopolymer poly(3-hydroxypropionate) (P3HP), and copolymer poly(3-hydroxypropionate-co-3-hydroxybutyrate) (P3HP4HB), dhaT and aldD were expressed in E. coli together with the phaC1 gene encoding polyhydroxyalkanoate (PHA) synthase gene of Ralstonia eutropha, and pcs' gene encoding the ACS domain of the tri-functional propionyl-CoA ligase (PCS) of Chloroflexus aurantiacus. Up to 92 wt% P3HP and 42 wt% P3HP4HB were produced by the recombinant Escherichia coli grown on PDO and a mixture of PDO+1,4-butanediol (BD), respectively.


Asunto(s)
Escherichia coli/metabolismo , Hidroxibutiratos/metabolismo , Ácido Láctico/análogos & derivados , Poliésteres/metabolismo , Aciltransferasas/genética , Aciltransferasas/metabolismo , Aeromonas hydrophila/genética , Aeromonas hydrophila/metabolismo , Aldehído Deshidrogenasa/genética , Aldehído Deshidrogenasa/metabolismo , Biopolímeros/biosíntesis , Butileno Glicoles/metabolismo , Chloroflexus/genética , Chloroflexus/metabolismo , Coenzima A Ligasas/genética , Coenzima A Ligasas/metabolismo , Cupriavidus necator/genética , Cupriavidus necator/metabolismo , Escherichia coli/genética , Fermentación , Ingeniería Genética , Hidroliasas/genética , Hidroliasas/metabolismo , Ácido Láctico/biosíntesis , Regiones Promotoras Genéticas , Glicoles de Propileno/metabolismo , Pseudomonas putida/genética , Pseudomonas putida/metabolismo
16.
Biomacromolecules ; 12(9): 3166-73, 2011 Sep 12.
Artículo en Inglés | MEDLINE | ID: mdl-21863836

RESUMEN

Polyhydroxyalkanoates (PHA) synthesis genes phbC and orfZ cloned from Ralstonia eutropha H16 were transformed into beta-oxidation weakened Pseudomonas putida KTOY08ΔGC, a mutant of P. putida KT2442. The recombinant P. putida strain termed KTHH06 was able to produce a short-chain-length PHA block copolymer consisting of poly(3-hydroxybutyrate) (P3HB) as one block and poly(4-hydroxybutyrate) (P4HB) as another block. One-dimensional and two-dimensional nuclear magnetic resonance (NMR) clearly indicated the polymer was a diblock copolymer consisting of 20 mol % P3HB as one block and 80 mol % P4HB as another one. Differential scanning calorimetric (DSC) showed that P3HB block melting temperatures (T(m)) in the block copolymer P3HB-b-P4HB was shift to low temperature compared with homopolymer P3HB and a blend of P3HB and P4HB. The block copolymer with a number average molecular weight of 50000 Da and a polydispersity of 3.1 demonstrated a better yield and tensile strength compared with that of its related random copolymer and blend of homopolymers of P3HB and P4HB.


Asunto(s)
Aciltransferasas/metabolismo , Materiales Biocompatibles/química , Cupriavidus necator/genética , Genética Microbiana/métodos , Polihidroxialcanoatos/biosíntesis , Pseudomonas putida/genética , Ingeniería de Tejidos/métodos , 4-Butirolactona/metabolismo , Aciltransferasas/química , Aciltransferasas/genética , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Materiales Biocompatibles/farmacología , Biodegradación Ambiental , Rastreo Diferencial de Calorimetría , Clonación Molecular , Cupriavidus necator/enzimología , Hidroxibutiratos/metabolismo , Peso Molecular , Resonancia Magnética Nuclear Biomolecular , Plásmidos , Poliésteres/metabolismo , Polihidroxialcanoatos/análisis , Pseudomonas putida/enzimología , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Temperatura , Resistencia a la Tracción , Transformación Bacteriana
17.
Nanotechnology ; 20(24): 245101, 2009 Jun 17.
Artículo en Inglés | MEDLINE | ID: mdl-19468171

RESUMEN

In this paper, novel multiaction antibacterial nanofibrous membranes containing apatite, Ag, AgBr and TiO2 as four active components were fabricated by an electrospinning technique. In this antibacterial membrane, each component serves a different function: the hydroxyapatite acts as the adsorption material for capturing bacteria, the Ag nanoparticles act as the release-active antibacterial agent, the AgBr nanoparticles act as the visible sensitive and release-active antibacterial agent, and the TiO2 acts as the UV sensitive antibacterial material and substrate for other functional components. Using E. coli as the typical testing organism, such multicomponent membranes exhibit excellent antimicrobial activity under UV light, visible light or in a dark environment. The significant antibacterial properties may be due to the synergetic action of the four major functional components, and the unique porous structure and high surface area of the nanofibrous membrane. It takes only 20 min for the bacteria to be completely (99.9%) destroyed under visible light. Even in a dark environment, about 50 min is enough to kill all of the bacteria. Compared to the four component system in powder form reported previously, the addition of the electrospun membrane could significantly improve the antibacterial inactivation of E. coli under the same evaluation conditions. Besides the superior antimicrobial capability, the permanence of the antibacterial activity of the prepared free-standing membranes was also demonstrated in repeated applications.


Asunto(s)
Antibacterianos/administración & dosificación , Escherichia coli/citología , Escherichia coli/efectos de los fármacos , Membranas Artificiales , Nanomedicina/métodos , Nanoestructuras/administración & dosificación , Nanoestructuras/química , Cristalización/métodos , Electroquímica/métodos , Sustancias Macromoleculares/química , Ensayo de Materiales , Conformación Molecular , Nanoestructuras/ultraestructura , Tamaño de la Partícula , Rotación , Propiedades de Superficie
18.
PDA J Pharm Sci Technol ; 63(3): 207-16, 2009.
Artículo en Inglés | MEDLINE | ID: mdl-20069793

RESUMEN

This paper describes a method to prepare indomethacin-loaded poly(butylcyanoacrylate) (PBCA) nanoparticles based on the anionic polymerization procedure, often used in the synthesis of poly(alkylcyanoacrylate) (PACA) nanoparticles for drug delivery. A detailed investigation into the capability of the polymeric nanoparticles to load this drug is discussed, along with the effect of the technique parameters on characteristics of the nanoparticles. The results indicated that indomethacin-loaded PBCA nanoparticles showed a particle size distribution that could be successfully exploited for the formulation of colloidal pharmaceutical systems. The particles were predominantly less than 200 nm in size with a negative charge, and rather stable when pH was adjusted to neutral. In addition, X-ray diffraction experiments revealed that the drug would be molecularly dispersed in the polymers in an amorphous state and crystalline with very small size. In vitro drug release revealed that indomethacin incorporation and/or adsorption led to a rapid drug release followed by a slower release in biological phosphate buffer and that the release rate decreased with increasing indomethacin content in the particle.


Asunto(s)
Enbucrilato/administración & dosificación , Indometacina/administración & dosificación , Nanopartículas/administración & dosificación , Emulsionantes/administración & dosificación , Concentración de Iones de Hidrógeno , Indometacina/química , Tamaño de la Partícula , Polvos , Solubilidad , Difracción de Rayos X
19.
Microb Biotechnol ; 10(2): 371-380, 2017 03.
Artículo en Inglés | MEDLINE | ID: mdl-27860284

RESUMEN

Polylactide (PLA) is a bio-based plastic commonly synthesized by chemical catalytic reaction using lactic acid (LA) as a substrate. Here, novel LA-containing terpolyesters, namely, P[LA-co-3-hydroxybutyrate (3HB)-co-3-hydroxypropionate (3HP)], short as PLBP, were successfully synthesized for the first time by a recombinant Escherichia coli harbouring polyhydroxyalkanoate (PHA) synthase from Pseudomonas stutzeri (PhaC1Ps ) with 4-point mutations at E130D, S325T, S477G and Q481K, and 3-hydroxypropionyl-CoA (3HP-CoA) synthesis pathway from glycerol, 3-hydroxybutyryl-CoA (3HB-CoA) as well as lactyl-CoA (LA-CoA) pathways from glucose. Combining these pathways with the PHA synthase mutant phaC1Ps (E130D S325T S477G Q481K), the random terpolyester P(LA-co-3HB-co-3HP), or PLBP, was structurally confirmed by nuclear magnetic resonance to consist of 2 mol% LA, 90 mol% 3HB, and 8 mol% 3HP respectively. Remarkably, the PLBP terpolyester was produced from low-cost sustainable glycerol and glucose. Monomer ratios of PLBP could be regulated by ratios of glycerol to glucose. Other terpolyester thermal and mechanical properties can be manipulated by adjusting the monomer ratios. More PLBP applications are to be expected.


Asunto(s)
Aciltransferasas/metabolismo , Escherichia coli/metabolismo , Ingeniería Metabólica , Poliésteres/metabolismo , Pseudomonas stutzeri/enzimología , Proteínas Recombinantes/metabolismo , Acilcoenzima A/metabolismo , Aciltransferasas/genética , Costos y Análisis de Costo , Escherichia coli/enzimología , Escherichia coli/genética , Glucosa/metabolismo , Glicerol/metabolismo , Espectroscopía de Resonancia Magnética , Redes y Vías Metabólicas/genética , Proteínas Mutantes/genética , Proteínas Mutantes/metabolismo , Mutación Missense , Mutación Puntual , Pseudomonas stutzeri/genética , Proteínas Recombinantes/genética
20.
Biomaterials ; 26(8): 899-904, 2005 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-15353201

RESUMEN

Hydroxyapatite (HAP) was blended into poly(3-hydroxybutyrate) (PHB) and poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) (PHBHHx) to make films and scaffolds. After HAP blending, mechanical properties of PHB including compressive elastic modulus and maximum stress showed improvement and osteoblast responses including cell growth and alkaline phosphatase activity were also strengthened. On the other hand, scaffolds made of PHBHHx blended with HAP had an adverse effect. No remarkable change on degradation of PHB or PHBHHx blended with HAP, respectively, was observed in simulated body fluid. Scanning electron microscopy examination revealed that osteoblast responses to HAP incorporation may be related to surface morphology and to the exposed HAP particles on polymer surface. All these results indicated that the blending of HAP particles into PHBHHx scaffolds fabricated by salt leaching was unable to either strengthen its mechanical properties or enhance osteoblast responses. Although HAP is bioactive and osteoconductive, its blending with PHBHHx did not generate a better performance on bone reconstruction.


Asunto(s)
Ácido 3-Hidroxibutírico , Sustitutos de Huesos , Caproatos , Durapatita , Fosfatasa Alcalina/metabolismo , Animales , Células de la Médula Ósea/enzimología , Células de la Médula Ósea/fisiología , División Celular/fisiología , Ensayo de Materiales , Microscopía Electrónica de Rastreo , Osteoblastos/enzimología , Osteoblastos/fisiología , Conejos , Espectroscopía Infrarroja por Transformada de Fourier
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