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Gene ; 519(2): 360-6, 2013 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-22903031

RESUMEN

Over the years, culturable cellulase-producing microorganisms have been isolated from a variety of sources and genes of cellulolytic enzymes have been cloned. Then again, the "great plate count anomaly" phenomenon necessitates a culture-independent metagenomic approach for the isolation of cellulolytic genes from microorganisms in their natural environment. We have constructed a metagenomic library derived from rice straw composts. Of 2739 clones screened, a lambda clone carrying a 12kb genomic fragment was able to yield a clear zone on an agar plate containing carboxymethyl cellulose (CMC). A 4.7kb subclone, generated by restriction enzyme digestion, was found to harbor a GH12 cellulase gene, RSC-EG1, encoding 464 amino acids along with two other ORFs. The identified cellulolytic gene showed more than 70% similarity on the amino acid level with cellulase from Micromonospora aurantiaca and Thermobispora sp. Interestingly, RSC-EG1 contains a stretch of approximately 86 amino acids not present in either of these close relatives. Our results demonstrated that RSC-EG1, stable over a wide temperature and pH range, is a novel endoglucanase, and provided the first example of metagenomics approach to isolate cellulolytic gene from rice straw composts.


Asunto(s)
Celulasa/genética , Metagenómica/métodos , Oryza/genética , Secuencia de Aminoácidos , Proteínas Bacterianas/genética , Biocombustibles , Celulasa/metabolismo , Celulosa/metabolismo , Clonación Molecular , ADN de Plantas/genética , Escherichia coli/genética , Expresión Génica , Biblioteca de Genes , Concentración de Iones de Hidrógeno , Micromonospora/enzimología , Micromonospora/genética , Datos de Secuencia Molecular , Oryza/enzimología , Tallos de la Planta/enzimología , Tallos de la Planta/genética , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Suelo , Temperatura
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