Intracellular pathways for lignin catabolism in white-rot fungi.

Lignin is a biopolymer found in plant cell walls that accounts for 30% of the organic carbon in the biosphere. White-rot fungi (WRF) are considered the most efficient organisms at degrading lignin in nature. While lignin depolymerization by WRF has been extensively studied, the possibility that WRF are able to utilize lignin as a carbon source is still a matter of controversy. Here, we employ 13C-isotope labeling, systems biology approaches, and in vitro enzyme assays to demonstrate that two WRF, Trametes versicolor and Gelatoporia subvermispora, funnel carbon from lignin-derived aromatic compounds into central carbon metabolism via intracellular catabolic pathways. These results provide insights into global carbon cycling in soil ecosystems and furthermore establish a foundation for employing WRF in simultaneous lignin depolymerization and bioconversion to bioproducts-a key step toward enabling a sustainable bioeconomy.

Enhancing CO2 Transport Across a PEEK-Ionene Membrane and Water-Lean Solvent Interface.

Efficient direct air capture (DAC) of CO2 will require strategies to deal with the relatively low concentration in the atmosphere. One such strategy is to employ the combination of a CO2 -selective membrane coupled with a CO2 capture solvent acting as a draw solution. Here, the interactions between a leading water-lean carbon-capture solvent, a polyether ether ketone (PEEK)-ionene membrane, CO2 , and combinations were probed using advanced NMR techniques coupled with advanced simulations. We identify the speciation and dynamics of the solvent, membrane, and CO2 , presenting spectroscopic evidence of CO2 diffusion through benzylic regions within the PEEK-ionene membrane, not spaces in the ionic lattice as expected. Our results demonstrate that water-lean capture solvents provide a thermodynamic and kinetic funnel to draw CO2 from the air through the membrane and into the bulk solvent, thus enhancing the performance of the membrane. The reaction between the carbon-capture solvent and CO2 produces carbamic acid, disrupting interactions between the imidazolium (Im+ ) cations and the bistriflimide anions within the PEEK-ionene membrane, thereby creating structural changes through which CO2 can diffuse more readily. Consequently, this restructuring results in CO2 diffusion at the interface that is faster than CO2 diffusion in the bulk carbon-capture solvent.

New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11.

Ruminants have co-evolved with their gastrointestinal microbial communities that digest plant materials to provide energy for the host. Some arctic and boreal ruminants have already shown to be vulnerable to dietary shifts caused by changing climate, yet we know little about the metabolic capacity of the ruminant microbiome in these animals. Here, we use meta-omics approaches to sample rumen fluid microbial communities from Alaskan moose foraging along a seasonal lignocellulose gradient. Winter diets with increased hemicellulose and lignin strongly enriched for BS11, a Bacteroidetes family lacking cultivated or genomically sampled representatives. We show that BS11 are cosmopolitan host-associated bacteria prevalent in gastrointestinal tracts of ruminants and other mammals. Metagenomic reconstruction yielded the first four BS11 genomes; phylogenetically resolving two genera within this previously taxonomically undefined family. Genome-enabled metabolic analyses uncovered multiple pathways for fermenting hemicellulose monomeric sugars to short-chain fatty acids (SCFA), metabolites vital for ruminant energy. Active hemicellulosic sugar fermentation and SCFA production was validated by shotgun proteomics and rumen metabolites, illuminating the role BS11 have in carbon transformations within the rumen. Our results also highlight the currently unknown metabolic potential residing in the rumen that may be vital for sustaining host energy in response to a changing vegetative environment.