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1.
Environ Sci Technol ; 57(50): 21038-21049, 2023 Dec 19.
Artigo em Inglês | MEDLINE | ID: mdl-38064758

RESUMO

Microplastic fibers from textiles have been known to significantly contribute to marine microplastic pollution. However, little is known about the microfiber formation and discharge during textile production. In this study, we have quantified microfiber emissions from one large and representative textile factory during different stages, spanning seven different materials, including cotton, polyester, and blended fabrics, to further guide control strategies. Wet-processing steps released up to 25 times more microfibers than home laundering, with dyeing contributing to 95.0% of the total emissions. Microfiber release could be reduced by using white coloring, a lower dyeing temperature, and a shorter dyeing duration. Thinner, denser yarns increased microfiber pollution, whereas using tightly twisted fibers mitigated release. Globally, wet textile processing potentially produced 6.4 kt of microfibers in 2020, with China, India, and the US as significant contributors. The study underlined the environmental impact of textile production and the need for mitigation strategies, particularly in dyeing processes and fiber choice. In addition, no significant difference was observed between the virgin polyesters and the used ones. Replacing virgin fibers with recycled fibers in polyester fabrics, due to their increasing consumption, might offer another potential solution. The findings highlighted the substantial impact of textile production on microfiber released into the environment, and optimization of material selection, knitting technologies, production processing, and recycled materials could be effective mitigation strategies.


Assuntos
Microplásticos , Plásticos , Têxteis , Poliésteres , Meio Ambiente , Indústria Têxtil
2.
J Ind Microbiol Biotechnol ; 47(12): 1099-1108, 2020 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-33221994

RESUMO

N-butanol is an important chemical and can be naturally synthesized by Clostridium species; however, the poor n-butanol tolerance of Clostridium impedes the further improvement in titer. In this study, Lactobacillus brevis, which possesses a higher butanol tolerance, was selected as host for heterologous butanol production. The Clostridium acetobutylicum genes thl, hbd, and crt which encode thiolase, ß-hydroxybutyryl-CoA dehydrogenase, and crotonase, and the Treponema denticola gene ter, which encodes trans-enoyl-CoA reductase were cloned into a single plasmid to express the butanol synthesis pathway in L. brevis. A titer of 40 mg/L n-butanol was initially achieved with plasmid pLY15-opt, in which all pathway genes are codon-optimized. A titer of 450 mg/L of n-butanol was then synthesized when ter was further overexpressed in this pathway. The role of metabolic flux was reinforced with pLY15, in which only the ter gene was codon-optimized, which greatly increased the n-butanol titer to 817 mg/L. Our strategy significantly improved n-butanol synthesis in L. brevis and the final titer is the highest achieved amongst butanol-tolerant lactic acid bacteria.


Assuntos
1-Butanol , Levilactobacillus brevis , 1-Butanol/metabolismo , 3-Hidroxiacil-CoA Desidrogenases , Acetil-CoA C-Acetiltransferase/metabolismo , Vias Biossintéticas , Butanóis/metabolismo , Clostridium/metabolismo , Clostridium acetobutylicum/genética , Levilactobacillus brevis/metabolismo
3.
J Cell Biochem ; 120(9): 14791-14803, 2019 09.
Artigo em Inglês | MEDLINE | ID: mdl-31090954

RESUMO

Diabetes and periodontal diseases have a mutual promoting relationship that induces severe tissue damage and cell death. The potential roles of microRNAs (miRNAs) and the type of cell death involved in diabetes-associated periodontitis are obscure. The gingival tissues of patients were obtained and MC3T3-E1 cells were costimulated with high glucose and lipopolysaccharide (LPS). Osseous morphometric analysis was evaluated with micro-CT, and histological characteristics were measured by hematoxylin/eosin and immunohistochemical staining. Cytokine secretion was confirmed by enzyme-linked immunosorbent assay, and reactive oxygen species (ROS) was measured using a DCFH-DA probe kit. Gene expression was measured by real-time quantitative reverse transcription PCR (qRT-PCR), and protein expression was assessed by Western blot and immunofluorescence analysis. The miR-214 level, receptor-interacting serine-threonine protein (RIP) 1, RIP3, and phospho-mixed lineage kinase domain-like (p-MLKL) protein expression were elevated in the inflamed gingival tissues of diabetes-associated periodontitis patients, with activating transcription factor 4 (ATF4) expression showing the opposite effect. The high glucose (22 mM) could not induce significant increase of RIP1, RIP3, and p-MLKL; however, the high glucose and LPS (500-1000 ng/mL) cotreatment resulted in increase in the number of RIP1, RIP3, and p-MLKL in MC3T3-E1 cells. NAC (ROS inhibitor) inhibited RIP1, RIP3, and increased ATF4; however, necrostatin-1 (Nec-1) (RIP1 inhibitor) specifically inhibited the protein expression of RIP1 and RIP3 and had no influence on ATF4. The use of antagomir-214 suppressed the expression of miR-214, RIP1, RIP3, and p-MLKL, but increased ATF4 protein level in glucose and LPS-induced cells. ATF4 knockdown by ATF4 small interfering RNA offset the effect of antagomir-214. RIP1- and RIP3-dependent necroptosis was confirmed in the inflamed gingival tissues of diabetes-associated periodontitis patients and high glucose- and LPS- cotreated cells. It was suggested that miR-214-targeted ATF4 participated in the regulation of necroptosis in vivo and in vitro.


Assuntos
Fator 4 Ativador da Transcrição/metabolismo , Apoptose , Diabetes Mellitus Tipo 2/complicações , Glucose/efeitos adversos , MicroRNAs/genética , Necrose , Periodontite/patologia , Fator 4 Ativador da Transcrição/genética , Adolescente , Adulto , Idoso , Biomarcadores , Estudos de Casos e Controles , Células Cultivadas , Feminino , Seguimentos , Humanos , Masculino , Pessoa de Meia-Idade , Periodontite/etiologia , Periodontite/metabolismo , Prognóstico , Espécies Reativas de Oxigênio/metabolismo , Edulcorantes/efeitos adversos , Adulto Jovem
4.
Stem Cells ; 36(4): 540-550, 2018 04.
Artigo em Inglês | MEDLINE | ID: mdl-29327399

RESUMO

Stem cell transplantation is a promising therapeutic strategy for myocardial infarction. However, transplanted cells face low survival rates due to oxidative stress and the inflammatory microenvironment in ischemic heart tissue. Melatonin has been used as a powerful endogenous antioxidant to protect cells from oxidative injury. However, melatonin cannot play a long-lasting effect against the hostile microenvironment. Nano drug delivery carriers have the ability to protect the loaded drug from degradation in physiological environments in a controlled manner, which results in longer effects and decreased side effects. Therefore, we constructed poly(lactide-co-glycolide)-monomethoxy-poly-(polyethylene glycol) (PLGA-mPEG) nanoparticles to encapsulate melatonin. We tested whether the protective effect of melatonin encapsulated by PLGA-mPEG nanoparticles (melatonin nanoparticles [Mel-NPs]) on adipose-derived mesenchymal stem cells (ADSCs) was enhanced compared to that of free melatonin both in vitro and in vivo. In the in vitro study, we found that Mel-NPs reduced formation of the p53- cyclophilin D complex, prevented mitochondrial permeability transition pores from opening, and rescued ADSCs from hypoxia/reoxygenation injury. Moreover, Mel-NPs can achieve higher ADSC survival rates than free melatonin in rat myocardial infarction areas, and the therapeutic effects of ADSCs pretreated with Mel-NPs were more apparent. Hence, the combination of Mel-NPs and stem cell transplantation may be a promising strategy for myocardial infarction therapy. Stem Cells 2018;36:540-550.


Assuntos
Tecido Adiposo/metabolismo , Melatonina , Infarto do Miocárdio , Nanopartículas , Polietilenoglicóis , Poliglactina 910 , Transplante de Células-Tronco , Células-Tronco/metabolismo , Tecido Adiposo/patologia , Aloenxertos , Animais , Sobrevivência Celular/efeitos dos fármacos , Melatonina/química , Melatonina/farmacologia , Infarto do Miocárdio/metabolismo , Infarto do Miocárdio/patologia , Infarto do Miocárdio/terapia , Nanopartículas/química , Nanopartículas/uso terapêutico , Polietilenoglicóis/química , Polietilenoglicóis/farmacologia , Poliglactina 910/química , Poliglactina 910/farmacologia , Ratos Sprague-Dawley , Ratos Transgênicos , Células-Tronco/patologia
5.
BMC Biotechnol ; 13: 110, 2013 Dec 19.
Artigo em Inglês | MEDLINE | ID: mdl-24354503

RESUMO

BACKGROUND: It remains a challenge for recombinant S. cerevisiae to convert xylose in lignocellulosic biomass hydrolysates to ethanol. Although industrial diploid strains are more robust compared to laboratory haploid strains, however, industrial diploid S. cerevisiae strains have been less pursued in previous studies. This work aims to construct fast xylose-fermenting yeast using an industrial ethanol-producing diploid S. cerevisiae strain as a host. RESULTS: Fast xylose-fermenting yeast was constructed by genome integration of xylose-utilizing genes and adaptive evolution, including 1) Piromyces XYLA was introduced to enable the host strain to convert xylose to xylulose; 2) endogenous genes (XKS1, RKI1, RPE1, TKL1, and TAL1) were overexpressed to accelerate conversion of xylulose to ethanol; 3) Candida intermedia GXF1, which encodes a xylose transporter, was introduced at the GRE3 locus to improve xylose uptake; 4) aerobic evolution in rich xylose media was carried out to increase growth and xylose consumption rates. The best evolved strain CIBTS0735 consumed 80 g/l glucose and 40 g/l xylose in rich media within 24 hours at an initial OD600 of 1.0 (0.63 g DCW/l) and produced 53 g/l ethanol. CONCLUSIONS: Based on the above fermentation performance, we conclude that CIBTS0735 shows great potential for ethanol production from lignocellulosic biomass.


Assuntos
Etanol/metabolismo , Fermentação , Genes Fúngicos , Engenharia Genética/métodos , Saccharomyces cerevisiae/genética , Xilose/metabolismo , Aldose-Cetose Isomerases/metabolismo , Candida/genética , Candida/metabolismo , Meios de Cultura/química , Evolução Molecular , Loci Gênicos , Lignina/metabolismo , Saccharomyces cerevisiae/crescimento & desenvolvimento
6.
Plant Physiol Biochem ; 201: 107879, 2023 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-37422947

RESUMO

As the most abundant renewable energy source, wood comprises the secondary cell wall (SCW). SCW biosynthesis involves lignin and cellulose deposition. Increasing studies have illustrated that R2R3-MYB transcription factors (TFs) play pivotal roles in affecting lignin accumulation and SCW formation. Nevertheless, the regulatory roles of R2R3-MYBs are still unresolved in Cryptomeria fortunei Hooibrenk cambium and wood formation. To dissect the potentials of CfMYBs, we successfully cloned and intensively studied the functions of CfMYB4 and CfMYB5 in SCW formation and abiotic stress response. They both contained the conserved MYB domain capable of forming a special structure that could bind to the core motifs of downstream genes. The phylogenetic tree implied that two CfMYBs clustered into different evolutionary branches. They were predominantly expressed in the stem and were localized to the nucleus. Furthermore, CfMYB4 functioned as an activator to enhance lignin and cellulose accumulation, and increase the SCW thickness by elevating the expression levels of SCW-related genes. By contrast, CfMYB5 negatively regulated lignin and cellulose biosynthesis, and decreased SCW formation by reducing the expression of SCW biosynthetic genes. Our data not only highlight the regulatory functions of CfMYBs in lignin deposition but also provide critical insights into the development of strategies for the genetic improvement of Cryptomeria fortunei wood biomass.


Assuntos
Parede Celular , Cryptomeria , Proteínas de Plantas , Fatores de Transcrição , Parede Celular/metabolismo , Celulose/metabolismo , Cryptomeria/genética , Cryptomeria/metabolismo , Regulação da Expressão Gênica de Plantas , Lignina/metabolismo , Filogenia , Proteínas de Plantas/metabolismo , Fatores de Transcrição/metabolismo
7.
Nat Nanotechnol ; 18(4): 403-411, 2023 04.
Artigo em Inglês | MEDLINE | ID: mdl-36864128

RESUMO

The health risks of exposure to 'eco-friendly' biodegradable plastics of anthropogenic origin and their effects on the gastrointestinal tract are largely unknown. Here we demonstrate that the enzymatic hydrolysis of polylactic acid microplastics generated nanoplastic particles by competing for triglyceride-degrading lipase during gastrointestinal processes. Nanoparticle oligomers were formed by hydrophobically driven self-aggregation. In a mouse model, polylactic acid oligomers and their nanoparticles bioaccumulated in the liver, intestine and brain. Hydrolysed oligomers caused intestinal damage and acute inflammation. A large-scale pharmacophore model revealed that oligomers interacted with matrix metallopeptidase 12. Mechanistically, high binding affinity (Kd = 13.3 µmol l-1) of oligomers to the catalytic zinc-ion finger domain led to matrix metallopeptidase 12 inactivation, which might mediate the adverse bowel inflammatory effects after exposure to polylactic acid oligomers. Biodegradable plastics are considered to be a solution to address environmental plastic pollution. Thus, understanding the gastrointestinal fates and toxicities of bioplastics will provide insights into potential health risks.


Assuntos
Plásticos Biodegradáveis , Animais , Camundongos , Poliésteres , Metaloproteases , Inflamação/induzido quimicamente
8.
Food Chem ; 373(Pt B): 131525, 2022 Mar 30.
Artigo em Inglês | MEDLINE | ID: mdl-34774380

RESUMO

Nonsolvent-induced phase separation (NIPS) method was employed to prepare polylactic acid (PLA) films using N-methyl-2-pyrrolidone (NMP) as a nonsolvent. The morphology and structure of PLA films were characterized, and the application of the films in pork preservation was investigated. When 10 wt% NMP was added, film with uniform porous structures was obtained. The crystalline and Fourier-transform infrared spectra analyses indicated that the addition of NMP during the preparation of PLA films caused their crystalline properties to change, but had no effect on their composition. However, the 10 wt% NMP/PLA film had improved thermal stability, water vapor transmission and oxygen permeability. The results on the changes in pH, total volatile basic nitrogen content and total viable counts of pork during refrigerated storage indicated that the 10 wt% NMP/PLA film could more effectively extend the shelf life of pork than polyethylene film. This work demonstrates the potential of the porous PLA film in pork packaging.


Assuntos
Embalagem de Alimentos , Poliésteres , Porosidade , Resistência à Tração
9.
Endocrine ; 68(3): 564-572, 2020 06.
Artigo em Inglês | MEDLINE | ID: mdl-32246318

RESUMO

PURPOSE: Oral microbiota maintains a dynamic ecological balance with the host. However, a disruption in this balance can lead to oral diseases such as dental caries and periodontitis. Several studies suggest differences in microbial composition in the oral cavity between patients with T2DM and nondiabetic patients. However, there is inadequate oral microbiome-related data from Chinese patients with T2DM, and the difference in microbiome profile between Chinese patients with T2DM and other ethnicities needs to be investigated further. METHOD: Oral swab samples were collected from 280 adult patients with T2DM and 162 healthy controls. Illumina sequencing was performed on oral samples targeting V1-V2 region of 16S rRNA gene and sequence analysis was carried in the QIIME. RESULTS: Patients with T2DM and healthy cohorts exhibited distinct oral microbial clusters based on principal coordinate analysis (PCoA). The Firmicutes/Bacteroidetes ratio increased in T2DM and T2DM patients presented significantly higher numbers of Neisseria, Streptococcus, Haemophilus, and Pseudomonas genera, and lower numbers of Acinetobacteria compared with healthy controls. When compared with the available published data of oral and gut microbiome associated with T2DM patients, we found the ratio of Firmicutes/Bacteroidetes and the abundance of Haemophilus could be a specific microbial biomarker in Chinese patients with T2DM. CONCLUSIONS: Our study revealed a significant difference in the oral microbiota between T2DM patients and healthy individuals. We identified 25 taxa, including 6 genera, with significant difference in abundance between T2DM and healthy controls.


Assuntos
Cárie Dentária , Diabetes Mellitus Tipo 2 , Microbiota , Adulto , Biomarcadores , China , Humanos , RNA Ribossômico 16S/genética
10.
ACS Appl Mater Interfaces ; 12(49): 54445-54458, 2020 Dec 09.
Artigo em Inglês | MEDLINE | ID: mdl-33231070

RESUMO

Zinc (Zn) alloys are promising alternatives to magnesium (Mg)- and iron (Fe)-based alloys because of their moderate corrosion rate and superior biocompatibility. To reduce the mass release of Zn2+ and improve the biocompatibility of Zn implants, the biomimetic zwitterionic polymer layer (phosphorylcholine chitosan-PCCs) was immobilized on the plasma-treated Zn1Mg surface. It is the chemical bonds between the -NH2 groups of the PCCs chain and O-C═O (C═O) groups on the plasma-treated Zn1Mg (Zn1Mg-PP) that contributes to the strong bonding strength between the film and the substrate, by which the PCCs (approx. 200 nm thick) layer can bear a 5.93 N normal load. The electrochemical impedance spectroscopy (EIS) results showed that the PCCs layer remarkably increased the resistance against corrosion attack, protecting substrates from over-quick degradation, and the protective effect of the layer with a thickness of 200 nm lasts for about 24 h. The corrosion products of Zn1Mg-PP-PCC in NaCl solution were determined as Zn5(OH)8Cl2·H2O and Zn3(PO4)2. Besides, the bulk Zn1Mg can trigger more aggressive macrophage activity, while the surface of Zn1Mg-PP and Zn1Mg-PP-PCC and their corrosion products (Zn3(PO4)2) tend to promote the differentiation of macrophages into the M2 phenotype, which is beneficial for implant applications.


Assuntos
Ligas/química , Materiais Biomiméticos/química , Quitosana/química , Fosforilcolina/química , Animais , Materiais Biomiméticos/metabolismo , Materiais Biomiméticos/farmacologia , Corrosão , Espectroscopia Dielétrica , Interferon gama/metabolismo , Lipopolissacarídeos/farmacologia , Ativação de Macrófagos/efeitos dos fármacos , Macrófagos/citologia , Macrófagos/metabolismo , Magnésio/química , Camundongos , Gases em Plasma/química , Próteses e Implantes , Células RAW 264.7 , Propriedades de Superfície , Zinco/química
11.
J Agric Food Chem ; 68(30): 7916-7925, 2020 Jul 29.
Artigo em Inglês | MEDLINE | ID: mdl-32614183

RESUMO

The production of acetone-butanol-ethanol by solventogenic Clostridium using lignocellulosic biomass can be a potential alternative to petroleum-based butanol. However, previous studies on nondetoxified lignocellulose hydrolysate could not provide better results when compared to those in synthetic medium. In this study, we engineered the pentose pathway of Clostridium beijerinckii NCIMB 8052, which was then subjected to adaptive laboratory evolution in the gradient mixture of synthetic medium and pretreated corn stover enzymatic hydrolysate (CSH) prepared according to the National Renewable Energy Laboratory (NREL) standard. The final resultant strain CIBTS1274A produced 20.7 g/L of total solvents in NREL CSH diluted to 6% initial total sugars, supplemented with ammonium acetate. This performance was comparable with that of corn-based butanol. In addition, this strain was successfully used in the scale-up operation using nondetoxified corn stover and corncob hydrolysate at Lignicell Refining Biotechnologies Ltd., which once was the only commercial biobutanol industry in the world.


Assuntos
Acetona/metabolismo , Butanóis/metabolismo , Clostridium beijerinckii/genética , Clostridium beijerinckii/metabolismo , Etanol/metabolismo , Zea mays/microbiologia , Fermentação , Lignina/química , Lignina/metabolismo , Engenharia Metabólica , Caules de Planta/química , Caules de Planta/metabolismo , Caules de Planta/microbiologia , Solventes/metabolismo , Zea mays/química , Zea mays/metabolismo
12.
Appl Opt ; 48(2): 338-42, 2009 Jan 10.
Artigo em Inglês | MEDLINE | ID: mdl-19137045

RESUMO

A dissolved oxygen sensor made of plastic optical fiber as the substrate and dichlorotris (1, 10-phenanthroline) ruthenium as a fluorescence indicator is studied. Oxygen quenching characteristics of both intensity and phase were measured; the obtained characteristics showed deviation from the linear relation described by the Stern-Volmer equation. A two-layer model is proposed to explain the deviation, and main parameters can be deduced with the model.


Assuntos
Fibras Ópticas , Óptica e Fotônica , Oxigênio/química , Rutênio/química , Desenho de Equipamento , Cinética , Modelos Químicos , Transição de Fase , Fenantrolinas/química , Plásticos , Espectrometria de Fluorescência/métodos , Fatores de Tempo
13.
Genes (Basel) ; 10(8)2019 08 15.
Artigo em Inglês | MEDLINE | ID: mdl-31443318

RESUMO

Cryptomeria fortunei, also known as the Chinese cedar, is an important timber species in southern China. The primary component of its woody tissues is lignin, mainly present in secondary cell walls. Therefore, continuous lignin synthesis is crucial for wood formation. In this study, we aimed to discover key genes involved in lignin synthesis expressed in the vascular cambium of C. fortunei. Through transcriptome sequencing, we detected expression of two genes, 4CL and CCoAOMT, known to be homologous to enzymes involved in the lignin synthesis pathway. We studied the function of these genes through bioinformatics analysis, cloning, vascular cambium expression analysis, and transgenic cross-species functional validation studies. Our results show that Cf4CL and CfCCoAOMT do indeed function in the pathway of lignin synthesis and likely perform this function in C. fortunei. They are prime candidates for future (gene-editing) studies aimed at optimizing C. fortunei wood production.


Assuntos
Cryptomeria/genética , Lignina/biossíntese , Metiltransferases/genética , Proteínas de Plantas/genética , Transcinamato 4-Mono-Oxigenase/genética , Câmbio/genética , Câmbio/metabolismo , Cryptomeria/enzimologia , Cryptomeria/metabolismo , Lignina/genética , Metiltransferases/metabolismo , Proteínas de Plantas/metabolismo , Transcinamato 4-Mono-Oxigenase/metabolismo
14.
Theranostics ; 9(15): 4525-4541, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31285777

RESUMO

Evidence indicates that microRNAs (miRNAs) play vital roles in regulating osteogenic differentiation and bone formation. Methods: Here, we show that a polyethyleneimine (PEI)-functionalized graphene oxide (GO) complex efficiently loaded with the miR-214 inhibitor is assembled into silk fibroin/hydroxyapatite (SF/HAP) scaffolds that spatially control the release of the miR-214 inhibitor. Results: SF/HAP/GO scaffolds with nanosized GO show high mechanical strength, and their hierarchical microporous structures promote cell adhesion and growth. The SF/HAP/GO-PEI scaffolds loaded with mir-214 inhibitor (SF/HAP/GPM) were tested for their ability to enhance osteogenic differentiation by inhibiting the expression of miR-214 while inversely increasing the expression of activating transcription factor 4 (ATF4) and activating the Akt and ERK1/2 signaling pathways in mouse osteoblastic cells (MC3T3-E1) in vitro. Similarly, the scaffolds activated the osteoblastic activity of endogenous osteoblast cells to repair critical-sized bone defects in rats without the need for loading osteoblast cells. Conclusion: This technology is used to increase osteogenic differentiation and mineralized bone formation in bone defects, which helps to achieve cell-free scaffold-based miRNA-inhibitor therapy for bone tissue engineering.


Assuntos
Fator 4 Ativador da Transcrição/metabolismo , Regeneração Óssea/fisiologia , Durapatita/química , Fibroínas/química , Grafite/química , MicroRNAs/metabolismo , Polietilenoimina/química , Alicerces Teciduais/química , Animais , Calcificação Fisiológica/fisiologia , Diferenciação Celular , Linhagem Celular , Proliferação de Células , Colágeno/metabolismo , Camundongos Nus , MicroRNAs/genética , Osteoblastos/metabolismo , Osteogênese , Ratos Sprague-Dawley , Transdução de Sinais , Crânio/patologia
15.
Biotechnol J ; 13(9): e1700588, 2018 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-30039929

RESUMO

Mycobacterium smegmatis is an important model strain of Mycobacterium for scientific study because it is non-pathogenic and grows rapidly. However, research is limited by the low efficiency and time-consuming nature of existing genome editing tools. Although the Streptococcus pyogenes CRISPR-Cas9 system is widely used in bacterial genome editing, it cannot be introduced into M. smegmatis because of its toxicity. The authors test 14 different Cas effector proteins in M. smegmatis. Cas9 (TdCas9_m) from Treponema denticola, Cas9 (NmCas9) from Neisseria meningitidis, and Corynebacterium glutamicum codon-optimized Cpf1 (FnCpf1_cg) from Francisella tularensis do not affect cell growth. The numbers of transformant plasmids expressing TdCas9_m, NmCas9, or FnCpf1_cg, and guide RNAs (gRNA) targeting ku(MSMEG_5580), ligD(MSMEG_6301), pta(MSMEG_0783), or ackA(MSMEG_0784) decreases by about 10-, 10-, or 100-fold, respectively, compared with plasmids expressing only the Cas effector proteins. Non-homologous end joining (NHEJ) is detected only in the CRISPR-FnCpf1_cg system. The one-plasmid-based, CRISPR-FnCpf1-assisted NHEJ system enables N iterative rounds of genome editing in 7N + 2 days, with an editing efficiency up to 70%; thus, this system should greatly reduce the necessary genome manipulation time for M. smegmatis.


Assuntos
Reparo do DNA por Junção de Extremidades , Edição de Genes/métodos , Mycobacterium smegmatis/genética , Sistemas CRISPR-Cas , Repetições Palindrômicas Curtas Agrupadas e Regularmente Espaçadas , Corynebacterium glutamicum/genética , Genoma Bacteriano
16.
Sci Rep ; 8(1): 17126, 2018 11 20.
Artigo em Inglês | MEDLINE | ID: mdl-30459400

RESUMO

The key to arthritis management is early diagnosis and treatment to prevent further joint destruction and maximize functional ability. Osteoarthritis (OA) and rheumatoid arthritis (RA) are two common types of arthritis that the primary care provider must differentiate, in terms of diagnosis and treatment. Effective and non-invasive strategies for early detection and disease identification are sorely needed. Growing evidence suggests that RA has a correlation with oral microbiome and may be affected by its dynamic variations. There is already a study comparing oral microbiome in patients with RA and OA, however, it did not screen for potential biomarkers for arthritis. In this study, we assessed the oral microbiome in saliva samples from 110 RA patients, 67 OA patients and 155 healthy subjects, using 16S rRNA gene amplicon sequencing. The structure and differences in oral microbiome between RA, OA and healthy subjects were analyzed. Eight oral bacterial biomarkers were identified to differentiate RA from OA. This report provides proof of oral microbiota as an informative source for discovering non-invasive biomarkers for arthritis screening.


Assuntos
Artrite Reumatoide/microbiologia , Microbiota/fisiologia , Osteoartrite/microbiologia , Saliva/microbiologia , Adulto , Idoso , Biomarcadores/análise , Estudos de Casos e Controles , Feminino , Humanos , Masculino , Microbiota/genética , Pessoa de Meia-Idade , RNA Ribossômico 16S
17.
Cell Death Differ ; 25(2): 444-452, 2018 02.
Artigo em Inglês | MEDLINE | ID: mdl-29077092

RESUMO

The repair of DNA double-stranded breaks (DNAdsb) through non-homologous end joining (NHEJ) is a prerequisite for the proper development of the central nervous system and the adaptive immune system. Yet, mice with Xlf or PAXX loss of function are viable and present with very mild immune phenotypes, although their lymphoid cells are sensitive to ionizing radiation attesting for the role of these factors in NHEJ. In contrast, we show here that mice defective for both Xlf and PAXX are embryonically lethal owing to a massive apoptosis of post-mitotic neurons, a situation reminiscent to XRCC4 or DNA Ligase IV KO conditions. The development of the adaptive immune system in Xlf-/-PAXX-/- E18.5 embryos is severely affected with the block of B- and T-cell maturation at the stage of IgH and TCRß gene rearrangements, respectively. This damaging phenotype highlights the functional nexus between Xlf and PAXX, which is critical for the completion of NHEJ-dependent mechanisms during mouse development.


Assuntos
Sistema Nervoso Central/crescimento & desenvolvimento , Proteínas de Ligação a DNA/metabolismo , Síndromes de Imunodeficiência/metabolismo , Animais , Sistema Nervoso Central/metabolismo , Reparo do DNA por Junção de Extremidades , Proteínas de Ligação a DNA/deficiência , Proteínas de Ligação a DNA/genética , Camundongos , Camundongos Endogâmicos C57BL , Camundongos Knockout , Mutação , Fenótipo , Cimentos de Resina/metabolismo
18.
Virol Sin ; 27(1): 10-8, 2012 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-22270802

RESUMO

Enterovirus 71 (EV71) is a member of the Entero-virus genus of the Picornaviridae family and is the major cause of Hand, foot, and mouth disease (HFMD) in children. Different strains from Gansu were cloned and the P1 protein was sequenced and analysed. Results indicate that there are three kinds of EV71 infections prevalent in Gansu. The VP1 protein from one of these strains, 55F, was expressed. The recombinant protein was expressed with high level and reacted specifically with the EV71 patient antibody, the recombinant protein was also applied to raise antiserum in rabbits and after the fourth injection a high titer of antiserum was detected by ELISA assay. These data are useful for further clarification of prevalent EV71 strains in the north of China at the molecular level and provide a basis for EV71 diagnosis.


Assuntos
Proteínas do Capsídeo/genética , Enterovirus Humano A/genética , Expressão Gênica , Doença de Mão, Pé e Boca/virologia , Animais , Anticorpos Antivirais/sangue , Anticorpos Antivirais/imunologia , Criança , China , Análise por Conglomerados , Enterovirus Humano A/isolamento & purificação , Humanos , Imunoensaio/métodos , Filogenia , RNA Viral/genética , Coelhos , Proteínas Recombinantes/imunologia , Proteínas Recombinantes/isolamento & purificação , Análise de Sequência de DNA
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