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1.
Transgenic Res ; 2024 Jun 26.
Artículo en Inglés | MEDLINE | ID: mdl-38922381

RESUMEN

Phytoremediation is an environmental safety strategy that might serve as a viable preventative approach to reduce soil contamination in a cost-effective manner. Using plants to remediate pollution from the environment is referred to as phytoremediation. In the past few decades, plants have undergone genetic manipulation to overcome inherent limitations by using genetically modified plants. This review illustrates the eco-friendly process of cleaning the environment using transgenic strategies combined with omics technologies. Herbicides tolerance and phytoremediation abilities have been established in genetically modified plants. Transgenic plants have eliminated the pesticides atrazine and metolachlor from the soil. To expand the application of genetically engineered plants for phytoremediation process, it is essential to test strategies in the field and have contingency planning. Omics techniques were used for understanding various genetic, hormonal, and metabolic pathways responsible for phytoremediation in soil. Transcriptomics and metabolomics provide useful information as resources to understand the mechanisms behind phytoremediation. This review aims to highlight the integration of transgenic strategies and omics technologies to enhance phytoremediation efficiency, emphasizing the need for field testing and comprehensive planning for successful implementation.

2.
Environ Monit Assess ; 196(4): 355, 2024 Mar 11.
Artículo en Inglés | MEDLINE | ID: mdl-38466496

RESUMEN

Vermicompost is a substantial source of nutrients, promotes soil fertility, and maintains or increases soil organic matter levels. Potentially toxic elements (PTEs) in vermicompost impact on nitrification activity. However, it is yet unknown how vermicompost affects nitrifying bacteria and archaea, comammox Nitrospira inopinata (complete ammonia oxidizers), net nitrification rates (NNRs), and PTEs. The effects of vermicompost application on NNRs, potential nitrification rates (NPs), PTEs, and the abundances of comammox N. inopinata bacteria, nitrite-oxidizing bacteria (NOB), and ammonia-oxidizing bacteria (AOB)/archaea (AOA) were studied. NNRs and NPs were significantly higher (p < 0.05) in fresh cow-dung vermicompost (stored for 40 days) as compared with other organic manure. The level of PTEs (Cu2+, Fe2+, Pb2+, Cd2+, and Zn2+) was significantly lower (p < 0.05) in vermicompost as compared with compost of waste material with Trichoderma and cow dung. Comammox N. inopinata, NOB, AOB, and AOA were significantly higher (p < 0.05) in stored cow-dung vermicompost (more than 1 year) as compared with other organic manure. The results of the scatterplot matrix analysis suggested that Fe2+, total nitrogen (TN), soil organic carbon (SOC), and total carbon (TC) were linearly correlated (p < 0.001) with NNRs and NPs in vermicompost and organic manure. Similarly, comammox N. inopinata bacteria, NOB, AOB, and AOA were linearly correlated (p < 0.001) with NNR and NP. These results indicated that vermicompost promoted nitrification activity by increasing microbial diversity and abundance, supplying nutrients and organic matter for microbial growth, and facilitating complex microbial interactions. It may be concluded that the influence of vermicompost, which played a great role in PTE concentration reduction, increased chemical, and biological properties, increased the growth rate of nitrifying bacteria/archaea and the nitrogen cycle.


Asunto(s)
Archaea , Nitrificación , Estiércol , Amoníaco , Carbono , Oxidación-Reducción , Suelo/química , Filogenia , Microbiología del Suelo , Monitoreo del Ambiente , Bacterias , Nitritos
3.
Eur J Nutr ; 62(7): 2763-2777, 2023 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-37294362

RESUMEN

PURPOSE: Dietary patterns (DPs) during pregnancy have been well researched. However, little is known about maternal diet after pregnancy. The aim of the study was to explore maternal DPs longitudinally, examine trajectories over 12 years after pregnancy and identify associated factors. METHODS: Of 14,541 pregnant women enrolled in the Avon Longitudinal Study of Parents and Children (ALSPAC) complete dietary information was available for 5336 women. Principal components analysis (PCA) was used to derive DPs. DP scores at each time point were used to create DP trajectories using group-based trajectory modelling (GBTM). Multinomial logistic regression assessed the association with maternal factors. RESULTS: A total of six distinct DPs were identified over time with different numbers of DPs at each time point. The "healthy" and "processed" DPs persisted over the 12-year post-pregnancy. Three trajectories of "healthy" and "processed" DPs were identified from GBTM. Half the women were on the moderately healthy DP trajectory with 37% on the lower trajectory and 9% on the higher healthy DP trajectory. 59% of women were on the lower processed DP trajectory with 38% on the moderate trajectory and 3.3% on the higher processed DP trajectory. Low educational attainment, low social class and smoking in pregnancy were independently associated with being on a less favourable DP trajectory over the 12 years. CONCLUSION: Health professionals should provide support on smoking cessation along with healthy eating advice during ante-natal counselling. Continued support on eating healthily after pregnancy would be beneficial for mothers and families.


Asunto(s)
Dieta , Padres , Humanos , Femenino , Niño , Embarazo , Estudios Longitudinales , Dieta Saludable , Madres
4.
J Clin Lab Anal ; 37(21-22): e24980, 2023 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-37908063

RESUMEN

INTRODUCTION: Organophosphorus compound (OPC) poisoning undoubtedly being a major concern in cultivation sites of the developing world, including Bangladesh. Two potential biomarkers, for example, serum creatine phosphokinase (CPK) and lactate dehydrogenase (LDH), are widely used in OPC poisoning severity indicators in patients. In this study, we sought to correlate the severity score of acute OPC poisoning with CPK or LDH level and subsequently explore their prognostic value. METHODS: This study was performed on a total of 70 patients with OPC poisoning admitted to the inpatient care unit at a territory-based hospital in Bangladesh. Sociodemographics and poison types were recorded, and severity was assessed according to Peradeniya Organophosphorus Poisoning (POP) scale. Serum CPK and LDH levels were measured and recorded. RESULTS: A total of seventy OPC patients were included with male to female ratio of 1.33:1, respectively, with a mean age of 28.7 ± 12.8 years. Chlorpyrifos and methylparathion were the most commonly utilized OP compounds, accounting for 42.9% and 28.6%, respectively. Among the OPC patients, the majority were married homemakers from rural areas. According to POP score, 55.7% and 37.1% of patients were categorized as mild and moderate, whereas very few were found to be severe. The mean serum CPK and LDH of OPC-patients at admission time were 235.6 ± 79.8 IU/L and 348.3 ± 154.1 IU/L, respectively. Serum CPK, atropine dose and hospital stay strongly correlated with clinical severity. CONCLUSION: We conclude that the serum CPK level strongly correlates with the degree of OPC poisoning and can be used as a predictor of the clinical intervention approaches.


Asunto(s)
Intoxicación por Organofosfatos , Humanos , Masculino , Femenino , Adolescente , Adulto Joven , Adulto , Intoxicación por Organofosfatos/diagnóstico , Creatinina , Pronóstico , Atropina , Creatina Quinasa , L-Lactato Deshidrogenasa
5.
Proc Natl Acad Sci U S A ; 117(3): 1742-1752, 2020 01 21.
Artículo en Inglés | MEDLINE | ID: mdl-31892541

RESUMEN

Microglial activation plays a central role in poststroke inflammation and causes secondary neuronal damage; however, it also contributes in debris clearance and chronic recovery. Microglial pro- and antiinflammatory responses (or so-called M1-M2 phenotypes) coexist and antagonize each other throughout the disease progress. As a result of this balance, poststroke immune responses alter stroke outcomes. Our previous study found microglial expression of interferon regulatory factor 5 (IRF5) and IRF4 was related to pro- and antiinflammatory responses, respectively. In the present study, we genetically modified the IRF5 and IRF4 signaling to explore their roles in stroke. Both in vitro and in vivo assays were utilized; IRF5 or IRF4 small interfering RNA (siRNA), lentivirus, and conditional knockout (CKO) techniques were employed to modulate IRF5 or IRF4 expression in microglia. We used a transient middle cerebral artery occlusion model to induce stroke and examined both acute and chronic stroke outcomes. Poststroke inflammation was evaluated with flow cytometry, RT-PCR, MultiPlex, and immunofluorescence staining. An oscillating pattern of the IRF5-IRF4 regulatory axis function was revealed. Down-regulation of IRF5 signaling by siRNA or CKO resulted in increased IRF4 expression, enhanced M2 activation, quenched proinflammatory responses, and improved stroke outcomes, whereas down-regulation of IRF4 led to increased IRF5 expression, enhanced M1 activation, exacerbated proinflammatory responses, and worse functional recovery. Up-regulation of IRF4 or IRF5 by lentivirus induced similar results. We conclude that the IRF5-IRF4 regulatory axis is a key determinant in microglial activation. The IRF5-IRF4 regulatory axis is a potential therapeutic target for neuroinflammation and ischemic stroke.


Asunto(s)
Isquemia Encefálica/metabolismo , Inflamación/metabolismo , Factores Reguladores del Interferón/metabolismo , Microglía/metabolismo , Neuronas/metabolismo , Accidente Cerebrovascular/metabolismo , Animales , Citocinas/metabolismo , Modelos Animales de Enfermedad , Infarto de la Arteria Cerebral Media/metabolismo , Factores Reguladores del Interferón/genética , Activación de Macrófagos , Masculino , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , ARN Interferente Pequeño , Transducción de Señal , Transcriptoma
6.
Int J Mol Sci ; 24(13)2023 Jun 22.
Artículo en Inglés | MEDLINE | ID: mdl-37445666

RESUMEN

Priming plants with beneficial microbes can establish rapid and robust resistance against numerous pathogens. Here, compelling evidence is provided that the treatment of rapeseed plants with Trichoderma harzianum OMG16 and Bacillus velezensis FZB42 induces defence activation against Verticillium longisporum infection. The relative expressions of the JA biosynthesis genes LOX2 and OPR3, the ET biosynthesis genes ACS2 and ACO4 and the SA biosynthesis and signalling genes ICS1 and PR1 were analysed separately in leaf, stem and root tissues using qRT-PCR. To successfully colonize rapeseed roots, the V. longisporum strain 43 pathogen suppressed the biosynthesis of JA, ET and SA hormones in non-primed plants. Priming led to fast and strong systemic responses of JA, ET and SA biosynthesis and signalling gene expression in each leaf, stem and root tissue. Moreover, the quantification of plant hormones via UHPLC-MS analysis revealed a 1.7- and 2.6-fold increase in endogenous JA and SA in shoots of primed plants, respectively. In roots, endogenous JA and SA levels increased up to 3.9- and 2.3-fold in Vl43-infected primed plants compared to non-primed plants, respectively. Taken together, these data indicate that microbial priming stimulates rapeseed defence responses against Verticillium infection and presumably transduces defence signals from the root to the upper parts of the plant via phytohormone signalling.


Asunto(s)
Brassica napus , Verticillium , Enfermedades de las Plantas/genética , Brassica napus/genética , Brassica napus/metabolismo , Verticillium/fisiología , Reguladores del Crecimiento de las Plantas , Expresión Génica , Hormonas , Regulación de la Expresión Génica de las Plantas , Ciclopentanos/metabolismo , Oxilipinas/metabolismo
7.
Omega (Westport) ; : 302228231173605, 2023 Apr 27.
Artículo en Inglés | MEDLINE | ID: mdl-37106521

RESUMEN

By emphasizing the Terror Management Theory, this study investigated the participants' perceptions, psychological experiences, coping strategies, and behavioral changes during the pandemic in Bangladesh in two phases: first, after the pandemic's immediate outbreak, and second, after 3 months of the pandemic (daily infection cases were very high). To perform the research, an empirical-phenomenological method was used. Findings indicate that at the first stage, participants' death phobia was extremely high, and poor medical facilities, religious struggles, imprudent behavior of others, concerns for family members, and a tendency to compare the socioeconomic status with other developed countries affected participants' emotions severely. Later on, participants' perceptions of the disease changed significantly. This study highlights that people's behavior varies depending on whether the thought of death is in the center or on the periphery of their attention. In both stages, religious faith and rituals played a crucial role in coping with the crisis situation.

8.
Apoptosis ; 27(7-8): 465-481, 2022 08.
Artículo en Inglés | MEDLINE | ID: mdl-35687256

RESUMEN

Pyroptosis defines a new type of GSDMs-mediated programmed cell death, distinguishes from the classical concepts of apoptosis and necrosis-mediated cell death and is prescribed by cell swelling and membrane denaturation, leading to the extensive secretion of cellular components and low-grade inflammatory response. However, NLRP3 inflammasome activation can trigger its downstream inflammatory cytokines, leading to the activation of pyroptosis-regulated cell death. Current studies reveal that activation of caspase-4/5/11-driven non-canonical inflammasome signaling pathways facilitates the pathogenesis and progression of acute pancreatitis (AP). In addition, a large number of studies have reported that NLRP3 inflammasome-dependent pyroptosis is a crucial player in driving the course of the pathogenesis of AP. Excessive uncontrolled GSDMD-mediated pyroptosis has been implicated in AP. Therefore, the pyroptosis-related molecule GSDMD may be an independent prognostic biomarker for AP. The present review paper summarizes the molecular mechanisms of pyroptotic signaling pathways and their pathophysiological impacts on the progress of AP. Moreover, we briefly present some experimental compounds targeting pyroptosis-regulated cell death for exploring novel therapeutic directions for the treatment and management of AP. Our review investigations strongly suggest that targeting pyroptosis could be an ideal therapeutic approach in AP.


Asunto(s)
Pancreatitis , Piroptosis , Enfermedad Aguda , Apoptosis , Caspasas/metabolismo , Humanos , Inflamasomas/genética , Inflamasomas/metabolismo , Péptidos y Proteínas de Señalización Intracelular/genética , Péptidos y Proteínas de Señalización Intracelular/metabolismo , Proteína con Dominio Pirina 3 de la Familia NLR/genética , Proteína con Dominio Pirina 3 de la Familia NLR/metabolismo , Pancreatitis/tratamiento farmacológico , Pancreatitis/genética , Proteínas de Unión a Fosfato/genética , Proteínas de Unión a Fosfato/metabolismo , Piroptosis/genética
9.
Neurochem Res ; 47(4): 933-951, 2022 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-34855048

RESUMEN

Thymoquinone is a pharmacologically active component of Nigella sativa Linn. seeds. Despite the diverse neuropharmacological attributes of TQ, limited reports related to adult neurogenesis and memory research are available. In this study, we investigated the effects of TQ on the proliferation and neural differentiation of cultured neural stem/progenitor cells (NSCs/NPCs). We also investigated the effect of TQ chronic administration on neurogenesis and memory in adult rats. Under proliferation conditions, TQ (0.05-0.3 µM) significantly increased NSCs/NPCs viability, neurosphere diameter, and cell count. TQ treatment under differentiation conditions increased the proportion of cells positive for Tuj1 (a neuronal marker). Furthermore, chronic oral administration of TQ (25 mg/kg/day for 12 weeks) to adult rats increased the number of bromodeoxyuridine (BrdU)-immunopositive cells double-stained with a mature neuronal marker, neuronal nuclei (NeuN), and a proliferation marker, doublecortin (Dcx), in the dentate gyrus of the hippocampus. TQ-administered rats showed a profound beneficial effect on avoidance-related learning ability, associated with an increase in the hippocampal mRNA and protein levels of brain-derived neurotrophic factor (BDNF), as measured by both real-time PCR and ELISA. Western blot analysis revealed that TQ stimulates the phosphorylation of cAMP-response element-binding protein (CREB), the upstream signaling molecule in the BDNF pathway. Furthermore, chronic administration of TQ decreased lipid peroxide and reactive oxygen species levels in the hippocampus. Taken together, our results suggest that TQ plays a role in memory improvement in adult rats and that the CREB/BDNF signaling pathways are involved in mediating the actions of TQ in hippocampal neurogenesis.


Asunto(s)
Factor Neurotrófico Derivado del Encéfalo , Neurogénesis , Animales , Benzoquinonas , Factor Neurotrófico Derivado del Encéfalo/metabolismo , Hipocampo/metabolismo , Ratas , Transducción de Señal
10.
J Environ Manage ; 317: 115469, 2022 Sep 01.
Artículo en Inglés | MEDLINE | ID: mdl-35751268

RESUMEN

Antibiotics are considered among the most non-biodegradable environmental contaminants due to their genetic resistance. Considering the importance of antibiotics removal, this study was aimed at multi-objective modeling and optimization of the Fenton-like process, homogeneous at initial circumneutral pH. Two main issues, including maximizing Ciprofloxacin (CIP) removal and minimizing sludge to iron ratio (SIR), were modeled by comparing central composite design (CCD) based on Response Surface Methodology (RSM) and hybrid Artificial Neural Network-Genetic Algorithm (ANN-GA). Results of simultaneous optimization using ethylene diamine tetraacetic acid (EDTA) revealed that at pH â‰… 7, optimal conditions for initial CIP concentration, Fe2+ concentration, [H2O2]/[Fe2+] molar ratio, initial EDTA concentration, and reaction time were 14.9 mg/L, 9.2 mM, 3.2, 0.6 mM, and 25 min, respectively. Under these optimal conditions, CIP removal and SIR were predicted at 85.2% and 2.24 (gr/M). In the next step, multilayer perceptron (MLP) and radial basis function (RBF) artificial neural networks (ANN) were developed to model CIP and SIR. It was concluded that ANN, especially multilayer perceptron (MLP-ANN) has a decent performance in predicting response values. Additionally, multi-objective optimization of the process was performed using Genetic Algorithm (GA) and Non-dominated Sorting Genetic Algorithm-II (NSGA-II) to maximize CIP removal efficiencies while minimizing SIR. NSGA-II optimization algorithm showed a reliable performance in the interaction between conflicting goals and yielded a better result than the GA algorithm. Finally, TOPSIS method with equal weights of the criteria was applied to choose the best alternative on the Pareto optimal solutions of the NSGA-II. Comparing the optimal values obtained by the multi-objective response surface optimization models (RSM-CCD) with the NSGA-II algorithm showed that the optimal variables in both models were close and, according to the absolute relative error criterion, possessed almost the same performance in the prediction of variables.


Asunto(s)
Ciprofloxacina , Peróxido de Hidrógeno , Antibacterianos , Ácido Edético , Concentración de Iones de Hidrógeno , Redes Neurales de la Computación , Aguas del Alcantarillado
11.
Curr Psychol ; : 1-18, 2022 Dec 16.
Artículo en Inglés | MEDLINE | ID: mdl-36540692

RESUMEN

While the public sector authorities and governments struggle to ensure socioeconomic balance at all levels of society, social entrepreneurship is widely known as the optimum solution to societal issues, such as unemployment, social disparities, and ecological imbalances. Despite the fact that the younger generation holds the highest potential to be future social entrepreneurs, a few studies have been conducted to explore the factors that influence their social entrepreneurial intentions (SEI) in developing countries, such as Bangladesh. Furthermore, the empirical studies based on the value-belief-norm (VBN) theory for addressing SEI were scarce in the existing literature. The study aims to measure the influence of Altruistic Values (AV), Traditional Values (TV), Personal Normative Beliefs (NB), Awareness of Consequences (AC), Ascription of Responsibility (AR), Personal Norms (PN), and Social Norms (SN) on SEI implementation of the VBN framework. A combination of web-based and hardcopy surveys was used to collect data from 797 students of higher educational institutes in Bangladesh. The hypotheses and associations between the factors were statistically analysed using structural equation modelling. As a result, it was demonstrated that AV and TV had a notable influence on NB. Similarly, NB showed a significant positive impact on PN and AC, while AC and AR were reported to have a substantial influence on PN. Finally, PN and SN showed a strong impact on SEI. The holistic social entrepreneurship model proposed in this study should be effective for socioeconomic development by incorporating commercially feasible and sustainable principles. Overall, the study findings would assist researchers, current social entrepreneurs and organisations, educational institutes, government agencies, and individual potential entrepreneurs with accurate knowledge and insight to construct their strategies and efficiently pursue social ventures. Supplementary information: The online version contains supplementary material available at 10.1007/s12144-022-04119-2.

12.
Stroke ; 52(10): 3362-3373, 2021 10.
Artículo en Inglés | MEDLINE | ID: mdl-34353112

RESUMEN

Background and Purpose: CD200 (cluster of differentiation 200), a highly glycosylated protein primarily expressed on neurons in the central nervous system, binds with its receptor CD200R to form an endogenous inhibitory signal against immune responses. However, little is known about the effect of neuronal CD200 signaling in cerebral ischemia. The aim of this study was to investigate how neuronal CD200 signaling impacts poststroke inflammation and the ischemic injury. Methods: CD200 tma1lf/fl:Thy1CreER mice were treated with tamoxifen to induce conditional gene knockout (ICKO) of neuronal CD200. The mice were subjected to a 60-minute transient middle cerebral artery occlusion. Stroke outcomes, apoptotic cell death, immune cell infiltration, microglia activation, and other inflammatory profiles were evaluated at 3 and 7 days after stroke. Results: Infarct volumes were significantly larger, and behavioral deficits more severe in ICKO versus control mice at 3 days after middle cerebral artery occlusion. Terminal deoxynucleotidyl transferase dUTP nick end labeling assay also revealed a significant increase in apoptotic neuronal death in CD200 ICKO mice. An enhancement in lymphocytic infiltration and microglial proinflammatory responses were revealed by flow cytometry at 3 and 7 days after stroke in ICKO mice, accompanied by an increased microglial phagocytosis activity. Plasma proinflammatory cytokine (TNFα [tumor necrosis factor alpha] and IL [interleukin]-1ß) levels significantly increased at 3 days, and IL-1ß/IL-6 levels increased at 7 days in ICKO versus control animals. ICKO led to significantly lower baseline level of CD200 both in brain and plasma. Conclusions: Neuronal CD200 inhibits proinflammatory responses and is protective against stroke injury.


Asunto(s)
Antígenos CD/análisis , Accidente Cerebrovascular Isquémico/prevención & control , Neuronas/fisiología , Neuroprotección , Accidente Cerebrovascular/prevención & control , Animales , Antígenos CD/genética , Apoptosis , Citocinas/metabolismo , Inmunidad Celular , Infarto de la Arteria Cerebral Media/complicaciones , Inflamación/etiología , Inflamación/prevención & control , Accidente Cerebrovascular Isquémico/psicología , Activación de Macrófagos , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , Microglía/inmunología , Infiltración Neutrófila , Transducción de Señal , Resultado del Tratamiento
13.
J Neuroinflammation ; 18(1): 70, 2021 Mar 12.
Artículo en Inglés | MEDLINE | ID: mdl-33712031

RESUMEN

BACKGROUND: Stroke is a sexually dimorphic disease. Previous studies have found that young females are protected against ischemia compared to males, partially due to the protective effect of ovarian hormones, particularly estrogen (E2). However, there are also genetic and epigenetic effects of X chromosome dosage that contribute to stroke sensitivity and neuroinflammation after injury, especially in the aged. Genes that escape from X chromosome inactivation (XCI) contribute to sex-specific phenotypes in many disorders. Kdm5c and kdm6a are X escapee genes that demethylate H3K4me3 and H3K27me3, respectively. We hypothesized that the two demethylases play critical roles in mediating the stroke sensitivity. METHODS: To identify the X escapee genes involved in stroke, we performed RNA-seq in flow-sorted microglia from aged male and female wild type (WT) mice subjected to middle cerebral artery occlusion (MCAO). The expression of these genes (kdm5c/kdm6a) were confirmed in four core genotypes (FCG) mice and in post-mortem human stroke brains by immunohistochemistry (IHC), Western blot, and RT-PCR. Chromatin immunoprecipitation (ChIP) assays were conducted to detect DNA levels of inflammatory interferon regulatory factor (IRF) 4/5 precipitated by histone H3K4 and H3K27 antibodies. Manipulation of kdm5c/kdm6a expression with siRNA or lentivirus was performed in microglial culture, to determine downstream pathways and examine the regulatory roles in inflammatory cytokine production. RESULTS: Kdm5c and kdm6a mRNA levels were significantly higher in aged WT female vs. male microglia, and the sex difference also existed in ischemic brains from FCG mice and human stroke patients. The ChIP assay showed the IRF 4/5 had higher binding levels to demethylated H3K4 or H3K27, respectively, in female vs. male ischemic microglia. Knockdown or over expression of kdm5c/kdm6a with siRNA or lentivirus altered the methylation of H3K4 or H3K27 at the IRF4/5 genes, which in turn, impacted the production of inflammatory cytokines. CONCLUSIONS: The KDM-Histone-IRF pathways are suggested to mediate sex differences in cerebral ischemia. Epigenetic modification of stroke-related genes constitutes an important mechanism underlying the ischemic sexual dimorphism.


Asunto(s)
Epigénesis Genética/genética , Inflamación/genética , Accidente Cerebrovascular Isquémico/genética , Caracteres Sexuales , Cromosoma X/genética , Anciano , Anciano de 80 o más Años , Animales , Inmunoprecipitación de Cromatina , Citocinas/biosíntesis , Femenino , Genotipo , Histona Demetilasas/genética , Humanos , Masculino , Ratones , Persona de Mediana Edad , ARN Interferente Pequeño/genética , Transducción de Señal/genética
14.
Int J Mol Sci ; 22(21)2021 Nov 03.
Artículo en Inglés | MEDLINE | ID: mdl-34769351

RESUMEN

BACKGROUND: Long non-coding RNA plays a vital role in changing the expression profiles of various target genes that lead to cancer development. Thus, identifying prognostic lncRNAs related to different cancers might help in developing cancer therapy. METHOD: To discover the critical lncRNAs that can identify the origin of different cancers, we propose the use of the state-of-the-art deep learning algorithm concrete autoencoder (CAE) in an unsupervised setting, which efficiently identifies a subset of the most informative features. However, CAE does not identify reproducible features in different runs due to its stochastic nature. We thus propose a multi-run CAE (mrCAE) to identify a stable set of features to address this issue. The assumption is that a feature appearing in multiple runs carries more meaningful information about the data under consideration. The genome-wide lncRNA expression profiles of 12 different types of cancers, with a total of 4768 samples available in The Cancer Genome Atlas (TCGA), were analyzed to discover the key lncRNAs. The lncRNAs identified by multiple runs of CAE were added to a final list of key lncRNAs that are capable of identifying 12 different cancers. RESULTS: Our results showed that mrCAE performs better in feature selection than single-run CAE, standard autoencoder (AE), and other state-of-the-art feature selection techniques. This study revealed a set of top-ranking 128 lncRNAs that could identify the origin of 12 different cancers with an accuracy of 95%. Survival analysis showed that 76 of 128 lncRNAs have the prognostic capability to differentiate high- and low-risk groups of patients with different cancers. CONCLUSION: The proposed mrCAE, which selects actual features, outperformed the AE even though it selects the latent or pseudo-features. By selecting actual features instead of pseudo-features, mrCAE can be valuable for precision medicine. The identified prognostic lncRNAs can be further studied to develop therapies for different cancers.


Asunto(s)
Algoritmos , Biomarcadores de Tumor/genética , Aprendizaje Profundo , Regulación Neoplásica de la Expresión Génica , Neoplasias/patología , Redes Neurales de la Computación , ARN Largo no Codificante/genética , Humanos , Neoplasias/clasificación , Neoplasias/genética , Medicina de Precisión , Pronóstico , Tasa de Supervivencia
15.
Water Sci Technol ; 83(10): 2389-2403, 2021 May.
Artículo en Inglés | MEDLINE | ID: mdl-34032617

RESUMEN

The green and cost-effective nature of the microbial desalination cell (MDC) make it a promising alternative for future sustainable desalination. However, MDC suffers from a low desalination rate that inhibits it being commercialized. External resistance (Rext) is one of the factors that significantly affect the desalination rate in MDCs, which is still under debate. This research, for the first time, investigated the impact of Rext on MDCs with different internal resistance (Rint) of the system to discover the optimal range of Rext for efficient MDC performance. The results showed that the effect of Rext on desalination rate (2.52 mg/h) was quite low when the Rint of MDC was high (200 Ω). However, operating the MDC with a low Rint (67 Ω) significantly improved the desalination rate (9.85 mg/h) and current generation. When MDC was operated with a low Rint the effect of variable Rext on desalination and current generation was noticeable. Therefore, low Rint (67 Ω) MDC was used to select the optimum Rext when the optimal range was found to be Rext ≪ Rint, Rext < Rint, Rext ≈ Rint (ranging from 1-69 Ω) to achieve the highest desalination rates (10.41-8.59 mg/h). The results showed the superior effect of Rint on desalination rate before selecting the optimal range of Rext in the outer circuit.


Asunto(s)
Fuentes de Energía Bioeléctrica , Purificación del Agua
16.
Environ Monit Assess ; 193(8): 529, 2021 Jul 28.
Artículo en Inglés | MEDLINE | ID: mdl-34322756

RESUMEN

Middle East and North African (MENA) countries over the decades are experiencing rapid industrial and infrastructural growth combined with being the global hub of oil and gas industries. These economic transformations are associated with release of air pollutants including urban air toxics (UAT) through industrial, traffic, and constructional activities into ambient urban environments. UAT concentrations levels may exacerbate in most MENA countries considering high number of vehicular traffic populations and petrochemical industries which are one of the main sources of this pollutant. Therefore, the main objective of the study is to review major findings of UAT levels in urban areas across thirteen (13) MENA countries. The study characterizes various measured UAT, assesses their concentrations in ambient environment, and identifies their major sources of emissions by reviewing more than 100 relevant UAT papers across the selected MENA countries. It was found that benzene, heavy metals, formaldehyde, and dioxin-like compounds are the most reported UAT. The study concluded that road traffic, fuel stations, and petrochemical industries were identified as the main sources of ambient UAT levels. It was further reported that most of the studies were based on short-term ambient environment with limited studies in indoor environments. Therefore, it is highly recommended that future research should focus on innovative health impact assessment and epidemiological studies from exposure to UAT levels. Also embarking on sustainable mitigation approaches through urban greenery, eco-industrial estates infrastructural developments, and renewable energy shares will reduce UAT levels and improve human health.


Asunto(s)
Contaminantes Atmosféricos , Contaminación del Aire , África del Norte , Contaminantes Atmosféricos/análisis , Contaminación del Aire/análisis , Monitoreo del Ambiente , Humanos , Medio Oriente
17.
Biochem Biophys Res Commun ; 528(2): 249-255, 2020 07 23.
Artículo en Inglés | MEDLINE | ID: mdl-32482386

RESUMEN

Type-2 diabetes (T2D) is a common metabolic disorder, which causes several physiological and pathological complications. Spleen is regarded as an important organ, which regulates immune system and iron metabolism in the body. Precious few studies have been conducted to explore the pathological and deleterious roles of diabetes on spleen. In our current study, we have explored and confirmed the pathological effects of diabetes on spleen in db/db experimental mice model. In our current study, 0.5 mg/kg fibroblast growth factor 1 (FGF1) dose was intraperitoneally administrated to db/db mice. We found that diabetes evidently induced spleen enlargement and fibrosis progression in the db/db mice. Additionally, our studies demonstrate that iron has hugely deposited in the spleen in db/db mice. Several studies have documented that diabetes largely disrupts the inflammatory cells distribution, immune homeostasis, proliferation and oxidative stress with the down-regulation of anti-inflammatory cytokines and antioxidant activities. Moreover, we have observed that FGF1 administration significantly reversed the deleterious effect of diabetes on spleen enlargement and dysfunction. In summary, these substantial findings clearly demonstrate that diabetes plays deleterious roles in maintaining the spleen structure and functions. Therefore, our investigations suggest that FGF1 can effectively prevent diabetes-mediated splenomegaly progression.


Asunto(s)
Diabetes Mellitus Experimental/complicaciones , Factor 1 de Crecimiento de Fibroblastos/uso terapéutico , Inflamación/patología , Estrés Oxidativo , Esplenomegalia/tratamiento farmacológico , Esplenomegalia/etiología , Animales , Proliferación Celular/efectos de los fármacos , Progresión de la Enfermedad , Factor 1 de Crecimiento de Fibroblastos/administración & dosificación , Factor 1 de Crecimiento de Fibroblastos/farmacología , Fibrosis , Inflamación/complicaciones , Hierro/metabolismo , Masculino , Ratones Endogámicos C57BL , Estrés Oxidativo/efectos de los fármacos , Bazo/efectos de los fármacos , Bazo/patología
18.
FASEB J ; 33(6): 7363-7374, 2019 06.
Artículo en Inglés | MEDLINE | ID: mdl-30865840

RESUMEN

Pulmonary arterial hypertension (PAH) is a progressive and fatal disease associated with remodeling of the pulmonary artery. We previously reported that the Ca2+-sensing receptor (CaSR) is up-regulated in pulmonary arterial smooth muscle cells (PASMCs) from patients with idiopathic PAH (IPAH) and contributes to enhanced Ca2+ responses and excessive cell proliferation. However, the mechanisms underlying the up-regulation of CaSR have not yet been elucidated. We herein examined involvement of platelet-derived growth factor (PDGF) on CaSR expression, Ca2+ responses, and proliferation in PASMCs. The expression of PDGF receptors was higher in PASMCs from patients with IPAH than in PASMCs from normal subjects. In addition, PDGF-induced activation of PDGF receptors and their downstream molecules [ERK1/2, p38, protein kinase B, and signal transducer and activator of transcription (STAT) 1/3] were sustained longer in PASMCs from patients with IPAH. The PDGF-induced CaSR up-regulation was attenuated by small interfering RNA knockdown of PDGF receptors and STAT1/3, and by the treatment with imatinib. In monocrotaline-induced pulmonary hypertensive rats, the up-regulation of CaSR was reduced by imatinib. The combination of NPS2143 and imatinib additively inhibited the development of pulmonary hypertension. These results suggest that enhanced PDGF signaling is involved in CaSR up-regulation, leading to excessive PASMC proliferation and vascular remodeling in patients with IPAH. The linkage between CaSR and PDGF signals is a novel pathophysiological mechanism contributing to the development of PAH.-Yamamura, A., Nayeem, M. J., Al Mamun, A., Takahashi, R., Hayashi, H., Sato, M. Platelet-derived growth factor up-regulates Ca2+-sensing receptors in idiopathic pulmonary arterial hypertension.


Asunto(s)
Regulación de la Expresión Génica/fisiología , Hipertensión Pulmonar/fisiopatología , Miocitos del Músculo Liso/metabolismo , Factor de Crecimiento Derivado de Plaquetas/fisiología , Receptores Sensibles al Calcio/biosíntesis , Remodelación Vascular/fisiología , Animales , Calcio/fisiología , División Celular/efectos de los fármacos , Células Cultivadas , Modelos Animales de Enfermedad , Regulación de la Expresión Génica/efectos de los fármacos , Humanos , Hipertensión Pulmonar/tratamiento farmacológico , Hipertensión Pulmonar/patología , Hipertensión Pulmonar/prevención & control , Mesilato de Imatinib/farmacología , Mesilato de Imatinib/uso terapéutico , Masculino , Monocrotalina/toxicidad , Músculo Liso Vascular/patología , Miocitos del Músculo Liso/efectos de los fármacos , Naftalenos/farmacología , Naftalenos/uso terapéutico , Factor de Crecimiento Derivado de Plaquetas/farmacología , Arteria Pulmonar/patología , Ratas , Ratas Sprague-Dawley , Receptores Sensibles al Calcio/genética , Receptores del Factor de Crecimiento Derivado de Plaquetas/agonistas , Receptores del Factor de Crecimiento Derivado de Plaquetas/fisiología , Transducción de Señal/efectos de los fármacos , Remodelación Vascular/efectos de los fármacos
19.
Environ Sci Technol ; 54(11): 6602-6609, 2020 06 02.
Artículo en Inglés | MEDLINE | ID: mdl-32319755

RESUMEN

Plants could mobilize (dissolution followed by vertical transport) uranium (U) from mineral forms that are otherwise stable. However, the variability of this plant-mediated mobilization of U as a function of the presence of various essential plant nutrients contained in these minerals remains unknown. A series of column experiments were conducted using Andropogon virginicus to quantify the vertical transport of U from stable mineral forms as influenced by the chemical and physical coexistence of U with the essential nutrient, phosphorus (P). The presence of plants significantly increased the vertical migration of U only when U was precipitated with P (UO2HPO4·4H2O; chernikovite) but not from UO2 (uraninite) that lacks any essential plant nutrient. The U dissolution was further increased when chernikovite co-occurred with a sparingly available form of P (FePO4) under P-limited growing conditions. Similarly, A. virginicus accumulated the highest amount of U from chernikovite (0.05 mg/g) in the presence of FePO4 compared to that of uraninite (no-P) and chernikovite supplemented with KH2PO4. These results signify an increased plant-mediated dissolution, uptake, and leaching of radioactive contaminants in soils that are nutrient deficient, a key factor that should be considered in management at legacy contamination sites.


Asunto(s)
Uranio , Contaminantes Radiactivos del Agua , Minerales , Fósforo , Solubilidad , Uranio/análisis , Contaminantes Radiactivos del Agua/análisis
20.
J Nat Prod ; 83(5): 1359-1367, 2020 05 22.
Artículo en Inglés | MEDLINE | ID: mdl-32309949

RESUMEN

A total of 20 derivatives (1-20) of the crinane-type alkaloid ambelline were synthesized. These semisynthetic derivatives were assessed for their potency to inhibit both acetylcholinesterase (AChE) and butyrylcholinesterase (BuChE). To predict central nervous system (CNS) availability, logBB was calculated, and the data correlated well with those obtained from the parallel artificial membrane permeability assay (PAMPA). All compounds should be able to permeate the blood-brain barrier (BBB) according to the obtained results. A total of 7 aromatic derivatives (5, 6, 7, 9, 10, 12, and 16) with different substitution patterns showed inhibitory potency against human serum BuChE (IC50 < 5 µM), highlighting the three top-ranked compounds as follows: 11-O-(1-naphthoyl)ambelline (16), 11-O-(2-methylbenzoyl)ambelline (6), and 11-O-(2-methoxybenzoyl)ambelline (9) with IC50 values of 0.10 ± 0.01, 0.28 ± 0.02, and 0.43 ± 0.04 µM, respectively. Notably, derivatives 6, 7, 9, and 16 displayed selective human BuChE (hBuChE) inhibition profiles with a selectivity index > 100. The in vitro results were supported by computational studies predicting plausible binding modes of the compounds in the active sites of hBuChE.


Asunto(s)
Alcaloides de Amaryllidaceae/síntesis química , Alcaloides de Amaryllidaceae/farmacología , Amaryllidaceae/química , Butirilcolinesterasa/efectos de los fármacos , Inhibidores de la Colinesterasa/síntesis química , Inhibidores de la Colinesterasa/farmacología , Alcaloides de Amaryllidaceae/farmacocinética , Barrera Hematoencefálica , Inhibidores de la Colinesterasa/farmacocinética , Ésteres , Humanos , Modelos Moleculares , Simulación del Acoplamiento Molecular , Estructura Molecular , Especificidad por Sustrato
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