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2.
Sci Data ; 7(1): 228, 2020 07 13.
Artículo en Inglés | MEDLINE | ID: mdl-32661237

RESUMEN

Fungi are key players in vital ecosystem services, spanning carbon cycling, decomposition, symbiotic associations with cultivated and wild plants and pathogenicity. The high importance of fungi in ecosystem processes contrasts with the incompleteness of our understanding of the patterns of fungal biogeography and the environmental factors that drive those patterns. To reduce this gap of knowledge, we collected and validated data published on the composition of soil fungal communities in terrestrial environments including soil and plant-associated habitats and made them publicly accessible through a user interface at https://globalfungi.com . The GlobalFungi database contains over 600 million observations of fungal sequences across > 17 000 samples with geographical locations and additional metadata contained in 178 original studies with millions of unique nucleotide sequences (sequence variants) of the fungal internal transcribed spacers (ITS) 1 and 2 representing fungal species and genera. The study represents the most comprehensive atlas of global fungal distribution, and it is framed in such a way that third-party data addition is possible.


Asunto(s)
Código de Barras del ADN Taxonómico , Hongos/clasificación , Secuenciación de Nucleótidos de Alto Rendimiento , Micobioma , Microbiología del Suelo , Plantas/microbiología
3.
Nat Commun ; 10(1): 5142, 2019 11 13.
Artículo en Inglés | MEDLINE | ID: mdl-31723140

RESUMEN

The evolutionary and environmental factors that shape fungal biogeography are incompletely understood. Here, we assemble a large dataset consisting of previously generated mycobiome data linked to specific geographical locations across the world. We use this dataset to describe the distribution of fungal taxa and to look for correlations with different environmental factors such as climate, soil and vegetation variables. Our meta-study identifies climate as an important driver of different aspects of fungal biogeography, including the global distribution of common fungi as well as the composition and diversity of fungal communities. In our analysis, fungal diversity is concentrated at high latitudes, in contrast with the opposite pattern previously shown for plants and other organisms. Mycorrhizal fungi appear to have narrower climatic tolerances than pathogenic fungi. We speculate that climate change could affect ecosystem functioning because of the narrow climatic tolerances of key fungal taxa.


Asunto(s)
Clima , Hongos/fisiología , Internacionalidad , Biodiversidad , Filogeografía , Lluvia , Especificidad de la Especie , Temperatura
4.
FEMS Microbiol Ecol ; 93(2)2017 02.
Artículo en Inglés | MEDLINE | ID: mdl-27789535

RESUMEN

Fungi represent a group of soil microorganisms fulfilling important ecological functions. Although several studies have shown that yeasts represent a significant proportion of fungal communities, our current knowledge is based mainly on cultivation experiments. In this study, we used amplicon sequencing of environmental DNA to describe the composition of yeast communities in European temperate forest and to identify the potential biotic and abiotic drivers of community assembly. Based on the analysis of ITS2 PCR amplicons, yeasts represented a substantial proportion of fungal communities ranging from 0.4 to 14.3% of fungal sequences in soil and 0.2 to 9.9% in litter. The species richness at individual sites was 28 ± 9 in soil and 31 ± 11 in litter. The basidiomycetous yeasts dominated over ascomycetous ones. In litter, yeast communities differed significantly among beech-, oak- and spruce-dominated stands. Drivers of community assembly are probably more complex in soils and comprise the effects of environmental conditions and vegetation.


Asunto(s)
Biodiversidad , Bosques , Microbiología del Suelo , Levaduras/clasificación , Fagus/microbiología , Hongos/genética , Picea/microbiología , Saccharomyces cerevisiae , Suelo/química , Árboles/microbiología , Levaduras/genética , Levaduras/crecimiento & desarrollo
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