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1.
Plant Cell ; 35(8): 2773-2798, 2023 08 02.
Artículo en Inglés | MEDLINE | ID: mdl-37119263

RESUMEN

Rhizoctonia solani is a devastating soil-borne pathogen that seriously threatens the cultivation of economically important crops. Multiple strains with a very broad host range have been identified, but only 1 (AG1-IA, which causes rice sheath blight disease) has been examined in detail. Here, we analyzed AG4-HGI 3 originally isolated from Tartary buckwheat (Fagopyrum tataricum), but with a host range comparable to AG1-IA. Genome comparison reveals abundant pathogenicity genes in this strain. We used multiomic approaches to improve the efficiency of screening for disease resistance genes. Transcriptomes of the plant-fungi interaction identified differentially expressed genes associated with virulence in Rhizoctonia and resistance in Tartary buckwheat. Integration with jasmonate-mediated transcriptome and metabolome changes revealed a negative regulator of jasmonate signaling, cytochrome P450 (FtCYP94C1), as increasing disease resistance probably via accumulation of resistance-related flavonoids. The integration of resistance data for 320 Tartary buckwheat accessions identified a gene homolog to aspartic proteinase (FtASP), with peak expression following R. solani inoculation. FtASP exhibits no proteinase activity but functions as an antibacterial peptide that slows fungal growth. This work reveals a potential mechanism behind pathogen virulence and host resistance, which should accelerate the molecular breeding of resistant varieties in economically essential crops.


Asunto(s)
Fagopyrum , Fagopyrum/genética , Perfilación de la Expresión Génica , Virulencia/genética , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Rhizoctonia/genética , Rhizoctonia/metabolismo , Resistencia a la Enfermedad/genética , Multiómica
2.
Am J Bot ; 110(5): e16162, 2023 05.
Artículo en Inglés | MEDLINE | ID: mdl-36990083

RESUMEN

PREMISE: Oceanic islands offer the opportunity to understand evolutionary processes underlying rapid diversification. Along with geographic isolation and ecological shifts, a growing body of genomic evidence has suggested that hybridization can play an important role in island evolution. Here we use genotyping-by-sequencing (GBS) to understand the roles of hybridization, ecology, and geographic isolation in the radiation of Canary Island Descurainia (Brassicaceae). METHODS: We carried out GBS for multiple individuals of all Canary Island species and two outgroups. Phylogenetic analyses of the GBS data were performed using both supermatrix and gene tree approaches and hybridization events were examined using D-statistics and Approximate Bayesian Computation. Climatic data were analyzed to examine the relationship between ecology and diversification. RESULTS: Analysis of the supermatrix data set resulted in a fully resolved phylogeny. Species networks suggest a hybridization event has occurred for D. gilva, with these results being supported by Approximate Bayesian Computation analysis. Strong phylogenetic signals for temperature and precipitation indicate one major ecological shift within Canary Island Descurainia. CONCLUSIONS: Inter-island dispersal played a significant role in the diversification of Descurainia, with evidence of only one major shift in climate preferences. Despite weak reproductive barriers and the occurrence of hybrids, hybridization appears to have played only a limited role in the diversification of the group with a single instance detected. The results highlight the need to use phylogenetic network approaches that can simultaneously accommodate incomplete lineage sorting and gene flow when studying groups prone to hybridization; patterns that might otherwise be obscured in species trees.


Asunto(s)
Hibridación Genética , Filogenia , España , Teorema de Bayes , Geografía
3.
New Phytol ; 234(5): 1583-1597, 2022 06.
Artículo en Inglés | MEDLINE | ID: mdl-35318683

RESUMEN

Underutilized crops are, by definition, under-researched compared to staple crops yet come with traits that may be especially important given climate change and the need to feed a globally increasing population. These crops are often stress-tolerant, and this combined with unique and beneficial nutritional profiles. Whilst progress is being made by generating reference genome sequences, in this Tansley Review, we show how this is only the very first step. We advocate that going 'beyond a reference genome' should be a priority, as it is only at this stage one can identify the specific genes and the adaptive alleles that underpin the valuable traits. We sum up how population genomic and pangenomic approaches have led to the identification of stress- and disease-tolerant alleles in staple crops and compare this to the small number of examples from underutilized crops. We also demonstrate how previously underutilized crops have benefitted from genomic advances and that many breeding targets in underutilized crops are often well studied in staple crops. This cross-crop population-level resequencing could lead to an understanding of the genetic basis of adaptive traits in underutilized crops. This level of investment may be crucial for fully understanding the value of these crops before they are lost.


Asunto(s)
Metagenómica , Fitomejoramiento , Cambio Climático , Productos Agrícolas/genética , Genómica
4.
New Phytol ; 235(5): 1927-1943, 2022 09.
Artículo en Inglés | MEDLINE | ID: mdl-35701896

RESUMEN

Golden buckwheat (Fagopyrum dibotrys or Fagopyrum cymosum) and Tartary buckwheat (Fagopyrum tataricum) belong to the Polygonaceae and the Fagopyrum genus is rich in flavonoids. Golden buckwheat is a wild relative of Tartary buckwheat, yet golden buckwheat is a traditional Chinese herbal medicine and Tartary buckwheat is a food crop. The genetic basis of adaptive divergence between these two buckwheats is poorly understood. Here, we assembled a high-quality chromosome-level genome of golden buckwheat and found a one-to-one syntenic relationship with the chromosomes of Tartary buckwheat. Two large inversions were identified that differentiate golden buckwheat and Tartary buckwheat. Metabolomic and genetic comparisons of golden buckwheat and Tartary buckwheat indicate an amplified copy number of FdCHI, FdF3H, FdDFR, and FdLAR gene families in golden buckwheat, and a parallel increase in medicinal flavonoid content. Resequencing of 34 wild golden buckwheat accessions across the two morphologically distinct ecotypes identified candidate genes, including FdMYB44 and FdCRF4, putatively involved in flavonoid accumulation and differentiation of plant architecture, respectively. Our comparative genomic study provides abundant genomic resources of genomic divergent variation to improve buckwheat with excellent nutritional and medicinal value.


Asunto(s)
Fagopyrum , Ecotipo , Fagopyrum/genética , Fagopyrum/metabolismo , Flavonoides , Perfilación de la Expresión Génica , Regulación de la Expresión Génica de las Plantas , Filogenia , Proteínas de Plantas/metabolismo
5.
Environ Sci Technol ; 56(23): 16857-16865, 2022 12 06.
Artículo en Inglés | MEDLINE | ID: mdl-36354276

RESUMEN

The mobilization and transport of per- and poly-fluoroalkyl substances (PFASs) via surface runoff (runoff) from aqueous film-forming foam (AFFF)-contaminated soils during rainfall, flooding, or irrigation has not been thoroughly evaluated, and the effectiveness of carbonaceous sorbents in limiting PFASs in runoff is similarly unquantified. Here, laboratory-scale rainfall simulations evaluate PFAS losses in runoff and in leaching to groundwater (leachate) from AFFF-contaminated soils varying in texture, PFAS composition and concentration, and remediation treatment. Leaching dominated PFAS losses in soils with a concentration of ∑PFAS = 0.2-2 mg/kg. However, with higher soil PFAS concentrations (∑PFAS = 31 mg/kg), leachate volumes were negligible and runoff dominated losses. The concentration and variety of PFASs were far greater in leachates regardless of the initial concentrations in soil. Losses of PFASs were dependent on the C-chain length for leachates and more on the initial concentration in soil for runoff. Suspended materials did not meaningfully contribute to runoff losses. While concentrations of most PFASs declined significantly after the first rainfall event, desorption and transport in both runoff and leachates persisted over several rainfall events. Finally, results showed that sorption to AC mostly occurred during, not prior to, rainfall events and that 1% w/w AC substantially reduced losses in runoff and leachates from all soils.


Asunto(s)
Fluorocarburos , Agua Subterránea , Contaminantes Químicos del Agua , Fluorocarburos/análisis , Contaminantes Químicos del Agua/análisis , Suelo , Contaminación Ambiental , Agua , Aerosoles
6.
Pestic Biochem Physiol ; 186: 105152, 2022 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-35973757

RESUMEN

Chemical or drug treatments are successfully used to treat parasitic nematode infections that impact human, animal and plant health. Many of these exert their effects through modifying neural function underpinning behaviours essential for parasite viability. Selectivity against the parasite may be achieved through distinct pharmacological properties of the parasite nervous system, as exemplified by the success of the ivermectin which target a glutamate-gated chloride channel found only in invertebrates. Despite the success of the ivermectins, emerging resistance and concerns around eco-toxicity are driving the search for new nematocidal chemicals or drugs. Here, we describe the potential of a 5-HT-gated chloride channel MOD-1, which is involved in vital parasite behaviours with constrained distribution in the invertebrate phyla. This ion channel has potential pharmacophores that could be targeted by new nematocidal chemicals and drugs. We have developed a microtiter based bioassay for MOD-1 pharmacology based on its ectopic expression in the Caenorhabditis elegans essential neuron M4. We have termed this technology 'PhaGeM4' for 'Pharmacogenetic targeting of M4 neuron'. Exposure of transgenic worms harbouring ectopically expressed MOD-1 to 5-HT results in developmental arrest. By additional expression of a fluorescence marker in body wall muscle to monitor growth we demonstrate that this assay is suitable for the identification of receptor agonists and antagonists. Indeed, the developmental progression is a robustly quantifiable bioassay that resolves MOD-1 activation by quipazine, 5-carboxyamidotryptamine and fluoxetine and highlight methiothepin as a potent antagonist. This assay has the intrinsic ability to highlight compounds with optimal bioavailability and furthermore to filter out off-target effects. It can be extended to the investigation of other classes of membrane receptors and modulators of neuronal excitation. This approach based on heterologous modulation of the essential M4 neuron function offers a route to discover new effective and selective anthelmintics potentially less confounded by disruptive environmental impact.


Asunto(s)
Caenorhabditis elegans , Canales de Cloruro , Neuronas , Animales , Antinematodos/farmacología , Caenorhabditis elegans/genética , Canales de Cloruro/antagonistas & inhibidores , Canales de Cloruro/genética , Ivermectina/farmacología , Neuronas/fisiología , Farmacogenética , Serotonina/metabolismo
7.
Surgeon ; 20(3): e61-e67, 2022 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-34090810

RESUMEN

BACKGROUND: There are different methods to repair a perforated peptic ulcer, the two most frequently used are the Graham patch omentopexy and the primary closure. Currently there is no high-level evidence to provide guidance of the optimal method of repair. The aim of this study is to compare the outcomes of the two methods so as to provide improved guidance for surgeons undertaking this repair. METHODS: A systematic review and meta-analysis was conducted including any study that compared Graham patch omentopexy with primary closure in adults. Embase, Medline, Cochrane and Google's search engine were searched. The primary outcome was breakdown of the repair resulting in bile leak and the secondary outcomes were mortality, operation time, wound infection and time to start oral intake. The meta-analysis was conducted using Review Manager Software version 5:4. Outcome data were reported as odd ratios and weighted mean differences with their 95% confidence intervals. RESULTS: Of the 229 studies identified, 6 were suitable for analysis, 4 were retrospective, one was a prospective cohort study and one was a randomized controlled trial. Meta-analysis showed no difference in occurrence of bile leak or mortality between primary closure and Graham patch omentopexy (OR 0.64; 95% (0.26-1.54) & 0.66; 95% (0.25-1.76) respectively). There was no difference in the rates of wound infection OR 0.65; 95% (0.4-1.05). The duration of the operation was shorter in the primary closure group by 5.6 min; 95% (-21 + 10.4). CONCLUSION: There was no difference in the clinical outcomes between the two modes of repair.


Asunto(s)
Laparoscopía , Úlcera Péptica Perforada , Infección de Heridas , Adulto , Humanos , Úlcera Péptica Perforada/cirugía , Estudios Prospectivos , Ensayos Clínicos Controlados Aleatorios como Asunto , Estudios Retrospectivos , Infección de Heridas/cirugía
8.
Biol Sport ; 39(3): 639-646, 2022 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-35959325

RESUMEN

To investigate the ability of the OMNI-RES (0-10) scale to estimate velocity and loading changes during sets to failure in the hang power clean (HPC) exercise. Eleven recreationally resistance-trained males (28.5 ± 3.5 years) with an average one-repetition maximum (1RM) value of 1.1 ± 0.07 kg body mass-1 in HPC, were assessed on five separate days with 48 hours of rest between sessions. After determining the 1RM value, participants performed four sets to self-determined failure with the following relative loading ranges: 60% < 70%, 70 < 80%, 80 < 90% and > 90%. The peak vertical velocity (PVV), and Rating of Perceived Exertion (RPE) were measured for every repetition of each set. The RPE expressed after the first repetition (RPE-1) and when the highest value of PVV was achieved during the set (RPE-max) were similar and significantly lower than the RPE associated with a 5% (RPE-5%) and 10% (RPE-10%) drop in PVV. In addition, the RPE produced at failure was similar to RPE-5% only for the heaviest range (≥ 90%). Furthermore, RPE-1 was useful to distinguish loading zones between the four assessed ranges (60 < 70%, vs. 70 < 80%, vs. 80 < 90%, vs. ≥ 90%). The RPE seems to be useful to identify PVV changes (maximal, 5% and 10% drop) during continuous sets to self-determined failure and to distinguish 10% loading zone increments, from 60 to 100% of 1RM in the HPC exercise.

9.
J Hered ; 112(6): 519-525, 2021 11 01.
Artículo en Inglés | MEDLINE | ID: mdl-34130314

RESUMEN

Identifying genes and traits that have diverged during domestication provides key information of importance for maintaining and even increasing yield and nutrients in existing crops. A "bottom-up" population genetics approach was used to identify signatures of selection across the eggplant genome, to better understand the process of domestication. RNA-seq data were obtained for 4 wild eggplants (Solanum insanum L.) and 16 domesticated eggplants (S. melongena L.) and mapped to the eggplant genome. Single-nucleotide polymorphism (SNPs) exhibiting signatures of selection in domesticates were identified as those exhibiting high FST between the 2 populations (evidence of significant divergence) and low π for the domesticated population (indicative of a selective sweep). Some of these regions appear to overlap with previously identified quantitative trait loci for domestication traits. Genes in regions of linkage disequilibrium surrounding these SNPs were searched against the Arabidopsis thaliana and tomato genomes to find orthologs. Subsequent gene ontology (GO) enrichment analysis identified over-representation of GO terms related to photosynthesis and response to the environment. This work reveals genomic changes involved in eggplant domestication and improvement, and how this compares to observed changes in the tomato genome, revealing shared chromosomal regions involved in the domestication of both species.


Asunto(s)
Solanum melongena , Domesticación , Genómica , Sitios de Carácter Cuantitativo , Solanum melongena/genética , Transcriptoma
10.
J Strength Cond Res ; 35(Suppl 1): S51-S56, 2021 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-33666592

RESUMEN

ABSTRACT: Chapman, M, Larumbe-Zabala, E, Triplett, NT, and Naclerio, F. Velocity change estimation by subjective measures over a wide-load spectrum in squat and bench press. J Strength Cond Res 35(2S): S51-S56, 2021-This study compared whether the perception of effort measured on a repetition-by-repetition basis during continuous sets to failure is different between squat (SQ) and bench press (BP). After determining the one repetition maximum (1RM) value in both SQ and BP, 18 subjects (28.2 ± 5 years, 50% women) performed 7 sets to failure per exercise, separated by 24-48 hours, alternating SQ and BP, using the following relative load ranges: 30 < 40%, 40 < 50%, 50 < 60%, 60% < 70%, 70 < 80%, 80 < 90%, and >90%. The mean accelerative velocity (MAV) and rating of perceived exertion (RPE) using the OMNI-RES (0-10) scale were measured for every repetition of each set. The ability of the OMNI-RES (0-10) scale to identify velocity changes during continuous sets to volitional failure and to distinguish loading zones divided into 10% slots, from 30 to 100% of 1RM was confirmed for both SQ and BP. The RPE values measured at (a) the first repetition; (b) the repetition where MAV peaks; (c) the repetition where MAV drops by ≤10% compared the maximum and (d) the last repetition, showed no differences (p > 0.05, d < 0.2) between exercises. In conclusion, the same RPE scores can be applied to both exercises, for either estimating the relative load or monitoring changes in MAV during continuous sets to failure.


Asunto(s)
Entrenamiento de Fuerza , Levantamiento de Peso , Aceleración , Ejercicio Físico , Femenino , Humanos , Masculino , Postura
11.
Mol Biol Evol ; 36(7): 1359-1372, 2019 07 01.
Artículo en Inglés | MEDLINE | ID: mdl-31039581

RESUMEN

In the context of food security, examining the genomics of domestication will help identify genes underlying adaptive and economically important phenotypes, for example, larger fruit, improved taste, and loss of agronomically inferior phenotypes. Examination of genome-scale single nucleotide polymorphisms demonstrates the relationships between wild ancestors of eggplant (Solanum melongena L.), confirming that Solanum insanum L. is the wild progenitor. This species is split roughly into an Eastern (Malaysian, Thai, and Vietnamese) and Western (Indian, Madagascan, and Sri Lankan) group, with domesticates derived from the former. Additional "wild" accessions from India appear to be feral escapes, derived multiple times from domesticated varieties through admixture. Accessions with small egg-shaped fruit are generally found intermixed with East Asian Solanum insanum confirming they are primitive relative to the large-fruited domesticates. Comparative transcriptomics was used to track the loci under selection. Sequence analysis revealed a genetic bottleneck reducing variation by almost 50% in the primitive accessions relative to the wild species and a further 10% in the landraces. We also show evidence for selection on genes with a role in response to wounding and apoptosis. Genes showing a significant difference in expression between wild and primitive or between primitive and landrace genepools were mostly (>75%) downregulated in the derived populations and enriched for gene ontologies related to defense, flowering, signaling, and response to biotic and abiotic stimuli. This work reveals genomic changes involved in crop domestication and improvement, and the population genetics work explains why defining the eggplant domestication trajectory has been so challenging.


Asunto(s)
Domesticación , Flujo Génico , Solanum melongena/genética , Evolución Biológica , Regulación hacia Abajo , Frutas/anatomía & histología , Variación Genética , Polimorfismo de Nucleótido Simple , Selección Genética , Solanum melongena/anatomía & histología , Solanum melongena/metabolismo , Transcriptoma
12.
New Phytol ; 228(6): 1953-1971, 2020 12.
Artículo en Inglés | MEDLINE | ID: mdl-33006142

RESUMEN

Inferring the processes responsible for the rich endemic diversity of oceanic island floras is important for our understanding of plant evolution and setting practical conservation priorities. This requires an accurate knowledge of phylogenetic relationships, which have often been difficult to resolve due to a lack of genetic variation. We employed genotyping-by-sequencing (GBS) to investigate how geographical isolation, habitat shifts, and hybridisation have contributed to the evolution of diversity observed in Argyranthemum Webb (Asteraceae), the largest genus of flowering plants endemic to the Macaronesian archipelagos. Species relationships were resolved, and biogeographical stochastic mapping identified intra-island speciation as the most frequent biogeographic process underlying diversification, contrary to the prevailing view in Argyranthemum and the Canary Islands. D-statistics revealed significant evidence of hybridisation between lineages co-occurring on the same island, however there was little support for the hypothesis that hybridisation may be responsible for the occurrence of nonmonophyletic multi-island endemic (MIE) species. Geographic isolation, habitat shifts and hybridisation have all contributed to the diversification of Argyranthemum, with intra-island speciation found to be more frequent than previously thought. Morphological convergence is also proposed to explain the occurrence of nonmonophyletic MIE species. This study reveals greater complexity in the evolutionary processes generating Macaronesian endemic diversity.


Asunto(s)
Asteraceae , Asteraceae/genética , Ecosistema , Especiación Genética , Islas , Océanos y Mares , Filogenia , España
13.
New Phytol ; 226(2): 326-344, 2020 04.
Artículo en Inglés | MEDLINE | ID: mdl-31951018

RESUMEN

Two major developments have made it possible to use examples of ecological radiations as model systems to understand evolution and ecology. First, the integration of quantitative genetics with ecological experiments allows detailed connections to be made between genotype, phenotype, and fitness in the field. Second, dramatic advances in molecular genetics have created new possibilities for integrating field and laboratory experiments with detailed genetic sequencing. Combining these approaches allows evolutionary biologists to better study the interplay between genotype, phenotype, and fitness to explore a wide range of evolutionary processes. Here, we present the genus Senecio (Asteraceae) as an excellent system to integrate these developments, and to address fundamental questions in ecology and evolution. Senecio is one of the largest and most phenotypically diverse genera of flowering plants, containing species ranging from woody perennials to herbaceous annuals. These Senecio species exhibit many growth habits, life histories, and morphologies, and they occupy a multitude of environments. Common within the genus are species that have hybridized naturally, undergone polyploidization, and colonized diverse environments, often through rapid phenotypic divergence and adaptive radiation. These diverse experimental attributes make Senecio an attractive model system in which to address a broad range of questions in evolution and ecology.


Asunto(s)
Senecio , Ambiente , Genotipo , Modelos Biológicos , Fenotipo , Senecio/genética
14.
Glob Chang Biol ; 26(11): 6474-6492, 2020 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-32902071

RESUMEN

Unravelling plant responses to rising atmospheric CO2 concentration ([CO2 ]) has largely focussed on plastic functional attributes to single generation [CO2 ] exposure. Quantifying the consequences of long-term, decadal multigenerational exposure to elevated [CO2 ] and the genetic changes that may underpin evolutionary mechanisms with [CO2 ] as a driver remain largely unexplored. Here, we investigated both plastic and evolutionary plant responses to elevated [CO2 ] by applying multi-omic technologies using populations of Plantago lanceolata L., grown in naturally high [CO2 ] for many generations in a CO2 spring. Seed from populations at the CO2 spring and an adjacent control site (ambient [CO2 ]) were grown in a common environment for one generation, and then offspring were grown in ambient or elevated [CO2 ] growth chambers. Low overall genetic differentiation between the CO2 spring and control site populations was found, with evidence of weak selection in exons. We identified evolutionary divergence in the DNA methylation profiles of populations derived from the spring relative to the control population, providing the first evidence that plant methylomes may respond to elevated [CO2 ] over multiple generations. In contrast, growth at elevated [CO2 ] for a single generation induced limited methylome remodelling (an order of magnitude fewer differential methylation events than observed between populations), although some of this appeared to be stably transgenerationally inherited. In all, 59 regions of the genome were identified where transcripts exhibiting differential expression (associated with single generation or long-term natural exposure to elevated [CO2 ]) co-located with sites of differential methylation or with single nucleotide polymorphisms exhibiting significant inter-population divergence. This included genes in pathways known to respond to elevated [CO2 ], such as nitrogen use efficiency and stomatal patterning. This study provides the first indication that DNA methylation may contribute to plant adaptation to future atmospheric [CO2 ] and identifies several areas of the genome that are targets for future study.


Asunto(s)
Fotosíntesis , Plantago , Dióxido de Carbono , Epigenoma , Hojas de la Planta , Plantago/genética
15.
Postharvest Biol Technol ; 168: 111266, 2020 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-33012992

RESUMEN

Societal awareness of healthy eating is increasing alongside the market for processed bagged salads, which remain as one of the strongest growing food sectors internationally, including most recently from indoor growing systems. Lettuce represents a significant proportion of this ready-to-eat salad market. However, such products typically have a short shelf life, with decay of post-harvest quality occurring through complex biochemical and physiological changes in leaves and resulting in spoilage, food waste and risks to health. We review the functional and quantitative genetic understanding of lettuce post-harvest quality, revealing that few findings have translated into improved cultivar development. We identify (i) phytonutrient status (for enhanced antioxidant and vitamin status, aroma and flavour) (ii) leaf biophysical, cell wall and water relations traits (for longer shelf life) (iii) leaf surface traits (for enhanced food safety and reduced spoilage) and (iv) chlorophyll, other pigments and developmental senescence traits (for appearance and colour), as key targets for future post-harvest breeding. Lettuce is well-placed for rapid future exploitation to address postharvest quality traits with extensive genomic resources including the recent release of the lettuce genome and the development of innovative breeding technologies. Although technologies such as CRISPR/Cas genome editing are paving the way for accelerated crop improvement, other equally important resources available for lettuce include extensive germplasm collections, bi-parental mapping and wide populations with genotyping for genomic selection strategies and extensive multiomic datasets for candidate gene discovery. We discuss current progress towards post-harvest quality breeding for lettuce and how such resources may be utilised for future crop improvement.

16.
Plant Cell Environ ; 42(1): 373-385, 2019 01.
Artículo en Inglés | MEDLINE | ID: mdl-30329164

RESUMEN

The superior agronomic and human nutritional properties of grain legumes (pulses) make them an ideal foundation for future sustainable agriculture. Legume-based farming is particularly important in Africa, where small-scale agricultural systems dominate the food production landscape. Legumes provide an inexpensive source of protein and nutrients to African households as well as natural fertilization for the soil. Although the consumption of traditionally grown legumes has started to decline, the production of soybeans (Glycine max Merr.) is spreading fast, especially across southern Africa. Predictions of future land-use allocation and production show that the soybean is poised to dominate future production across Africa. Land use models project an expansion of harvest area, whereas crop models project possible yield increases. Moreover, a seed change in farming strategy is underway. This is being driven largely by the combined cash crop value of products such as oils and the high nutritional benefits of soybean as an animal feed. Intensification of soybean production has the potential to reduce the dependence of Africa on soybean imports. However, a successful "soybean bonanza" across Africa necessitates an intensive research, development, extension, and policy agenda to ensure that soybean genetic improvements and production technology meet future demands for sustainable production.


Asunto(s)
Producción de Cultivos , Grano Comestible , Glycine max , África , Cambio Climático/estadística & datos numéricos , Producción de Cultivos/estadística & datos numéricos , Producción de Cultivos/tendencias , Grano Comestible/crecimiento & desarrollo , Fabaceae/crecimiento & desarrollo , Predicción , Modelos Estadísticos , Glycine max/crecimiento & desarrollo
17.
Glob Chang Biol ; 25(1): 1-11, 2019 01.
Artículo en Inglés | MEDLINE | ID: mdl-30422366

RESUMEN

Rising atmospheric CO2 concentration is a key driver of enhanced global greening, thought to account for up to 70% of increased global vegetation in recent decades. CO2 fertilization effects have further profound implications for ecosystems, food security and biosphere-atmosphere feedbacks. However, it is also possible that current trends will not continue, due to ecosystem level constraints and as plants acclimate to future CO2 concentrations. Future predictions of plant response to rising [CO2 ] are often validated using single-generation short-term FACE (Free Air CO2 Enrichment) experiments but whether this accurately represents vegetation response over decades is unclear. The role of transgenerational plasticity and adaptation in the multigenerational response has yet to be elucidated. Here, we propose that naturally occurring high CO2 springs provide a proxy to quantify the multigenerational and long-term impacts of rising [CO2 ] in herbaceous and woody species respectively, such that plasticity, transgenerational effects and genetic adaptation can be quantified together in these systems. In this first meta-analysis of responses to elevated [CO2 ] at natural CO2 springs, we show that the magnitude and direction of change in eight of nine functional plant traits are consistent between spring and FACE experiments. We found increased photosynthesis (49.8% in spring experiments, comparable to 32.1% in FACE experiments) and leaf starch (58.6% spring, 84.3% FACE), decreased stomatal conductance (gs , 27.2% spring, 21.1% FACE), leaf nitrogen content (6.3% spring, 13.3% FACE) and Specific Leaf Area (SLA, 9.7% spring, 6.0% FACE). These findings not only validate the use of these sites for studying multigenerational plant response to elevated [CO2 ], but additionally suggest that long-term positive photosynthetic response to rising [CO2 ] are likely to continue as predicted by single-generation exposure FACE experiments.


Asunto(s)
Aclimatación/fisiología , Dióxido de Carbono/análisis , Dióxido de Carbono/metabolismo , Manantiales Naturales , Plantas/metabolismo , Ecosistema , Ambiente , Manantiales Naturales/química , Fotosíntesis/fisiología , Hojas de la Planta/química , Hojas de la Planta/crecimiento & desarrollo , Hojas de la Planta/metabolismo , Plantas/química
18.
FASEB J ; 32(10): 5495-5505, 2018 10.
Artículo en Inglés | MEDLINE | ID: mdl-29750574

RESUMEN

Exercise has been suggested to ameliorate the detrimental effects of chemotherapy on skeletal muscle. The aim of this study was to compare the effects of different exercise regimens with usual care on skeletal muscle morphology and mitochondrial markers in patients being treated with chemotherapy for breast cancer. Specifically, we compared moderate-intensity aerobic training combined with high-intensity interval training (AT-HIIT) and resistance training combined with high-intensity interval training (RT-HIIT) with usual care (UC). Resting skeletal muscle biopsies were obtained pre- and postintervention from 23 randomly selected women from the OptiTrain breast cancer trial who underwent RT-HIIT, AT-HIIT, or UC for 16 wk. Over the intervention, citrate synthase activity, muscle fiber cross-sectional area, capillaries per fiber, and myosin heavy chain isoform type I were reduced in UC, whereas RT-HIIT and AT-HIIT were able to counteract these declines. AT-HIIT promoted up-regulation of the electron transport chain protein levels vs. UC. RT-HIIT favored satellite cell count vs. UC and AT-HIIT. There was a significant association between change in citrate synthase activity and self-reported fatigue. AT-HIIT and RT-HIIT maintained or improved markers of skeletal muscle function compared with the declines found in the UC group, indicating a sustained trainability in addition to the preservation of skeletal muscle structural and metabolic characteristics during chemotherapy. These findings highlight the importance of supervised exercise programs for patients with breast cancer during chemotherapy.-Mijwel, S., Cardinale, D. A., Norrbom, J., Chapman, M., Ivarsson, N., Wengström, Y., Sundberg, C. J., Rundqvist, H. Exercise training during chemotherapy preserves skeletal muscle fiber area, capillarization, and mitochondrial content in patients with breast cancer.


Asunto(s)
Antineoplásicos/administración & dosificación , Neoplasias de la Mama/metabolismo , Neoplasias de la Mama/terapia , Terapia por Ejercicio , Mitocondrias Musculares/metabolismo , Fibras Musculares Esqueléticas/metabolismo , Adulto , Antineoplásicos/efectos adversos , Neoplasias de la Mama/patología , Femenino , Humanos , Persona de Mediana Edad , Mitocondrias Musculares/patología , Fibras Musculares Esqueléticas/patología
19.
J Strength Cond Res ; 33(1): 8-16, 2019 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-28338528

RESUMEN

Chapman, M, Larumbe-Zabala, E, Gosss-Sampson, M, Colpus, M, Triplett, NT, and Naclerio, F. Perceptual, mechanical, and electromyographic responses to different relative loads in the parallel squat. J Strength Cond Res 33(1): 8-16, 2019-The effectiveness of the OMNI-RES (0-10) Scale and the electromyographic signal for monitoring changes in the movement velocity were examined during a set to muscular failure using different percentages of 1 repetition maximum (1RM) in the parallel squat exercise (PSQ). Twelve men (26.3 ± 5.8 years) were evaluated on 8 separate days with 48 hours of rest between sessions. After determining the 1RM value, participants underwent 7 tests until achieving muscular failure with the following percentage ranges: 30 to <40%, 40 to <50%, 50 to <60%, 60 to <70%, 70 to <80%, 80 to <90%, and >90%. An optical rotary encoder measured mean accelerative velocity (MAV), and the OMNI-RES (0-10) Scale was used to express the rating of perceived exertion (RPE) after every repetition of each set. In addition, the normalized root mean square signal of the surface electromyography (N-EMG) was calculated for the vastus medialis muscle. The RPE expressed after the first repetition and when the maximum value of MAV was achieved along the sets was lower (p < 0.001, d > 0.8) than the RPE that corresponded to a 10% drop in MAV and at failure. In addition, the initial RPE was useful to distinguish different loading zones by anchoring the OMNI-RES value to the magnitude of the relative load (<60%, 60 to <70% or ≤70% 1RM). Similar patterns were observed using the N-EMG. In conclusion, apart from differentiating between relative loads during a set to failure in the PSQ, the RPE and the N-EMG can both reflect changes associated with the initial, maximal, 10% drop in movement velocity and the muscular failure.


Asunto(s)
Electromiografía , Fuerza Muscular , Esfuerzo Físico , Músculo Cuádriceps/fisiología , Aceleración , Adulto , Humanos , Masculino , Movimiento , Postura , Levantamiento de Peso , Adulto Joven
20.
J Strength Cond Res ; 33(10): 2722-2732, 2019 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-29481450

RESUMEN

Chapman, M, Larumbe-Zabala, E, Gosss-Sampson, M, Triplett, NT, and Naclerio, F. Using perceptual and neuromuscular responses to estimate mechanical changes during continuous sets in the bench press. J Strength Cond Res 33(10): 2722-2732, 2019-This study analyzed the effectiveness of the OMNI-RES (0-10) and the electromyographic signal for monitoring changes in the movement velocity during a set to muscular failure performed with different relative loads in the bench press (BP) exercise. Ten males (30.8 ± 5.7 years) were evaluated on 8 separate days with 48 hours of rest between sessions. After determining the 1 repetition maximum value, participants performed 7 sets to failure with the following relative loads ranges: 30 < 40%, 40 < 50%, 50 < 60%, 60 < 70%, 70 < 80%, 80 < 90%, and >90%. The mean accelerative velocity (MAV), the rating of perceived exertion (RPE), and the normalized root-mean-square (N-RMS) signal from the anterior deltoids were measured for every repetition of each set. The RPE expressed after the first repetition and when the maximum value of MAV was achieved over the sets was lower (p < 0.001, d > 0.80) than the RPE associated with a 10% drop in MAV and at failure. Furthermore, the initial RPE was useful to distinguish different loading zones between the light relative loads (30 < 40% vs. 40 < 50% vs. 50 < 60%) and from these 3 zones to the higher relative load ranges (60 to >90%). Similar, but less clear, differences were observed for the N-RMS. In conclusion, apart from differentiating between relative loads, the RPE and in some cases N-RMS can both reflect changes associated with the initial, maximal, 10% drop in movement velocity, and muscular failure during a continuous set in the BP.


Asunto(s)
Músculo Esquelético/fisiología , Esfuerzo Físico , Entrenamiento de Fuerza , Levantamiento de Peso/fisiología , Aceleración , Adulto , Electromiografía , Humanos , Masculino , Movimiento , Descanso
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