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1.
Entropy (Basel) ; 24(11)2022 Nov 08.
Artículo en Inglés | MEDLINE | ID: mdl-36359713

RESUMEN

This paper presents a method to minimize the spread of negative influence on social networks by contact blocking. First, based on the infection-spreading process of COVID-19, the traditional susceptible, infectious, and recovered (SIR) propagation model is extended to the susceptible, non-symptomatic, infectious, and recovered (SNIR) model. Based on this model, we present a method to estimate the number of individuals infected by a virus at any given time. By calculating the reduction in the number of infected individuals after blocking contacts, the method selects the set of contacts to be blocked that can maximally reduce the affected range. The selection of contacts to be blocked is repeated until the number of isolated contacts that need to be blocked is reached or all infection sources are blocked. The experimental results on three real datasets and three synthetic datasets show that the algorithm obtains contact blockings that can achieve a larger reduction in the range of infection than other similar algorithms. This shows that the presented SNIR propagation model can more precisely reflect the diffusion and infection process of viruses in social networks, and can efficiently block virus infections.

2.
BMC Med Inform Decis Mak ; 20(1): 110, 2020 06 17.
Artículo en Inglés | MEDLINE | ID: mdl-32552708

RESUMEN

BACKGROUND: The essential proteins in protein networks play an important role in complex cellular functions and in protein evolution. Therefore, the identification of essential proteins in a network can help to explain the structure, function, and dynamics of basic cellular networks. The existing dynamic protein networks regard the protein components as the same at all time points; however, the role of proteins can vary over time. METHODS: To improve the accuracy of identifying essential proteins, an improved h-index algorithm based on the attenuation coefficient method is proposed in this paper. This method incorporates previously neglected node information to improve the accuracy of the essential protein search. Based on choosing the appropriate attenuation coefficient, the values, such as monotonicity, SN, SP, PPV and NPV of different essential protein search algorithms are tested. RESULTS: The experimental results show that, the algorithm proposed in this paper can ensure the accuracy of the found proteins while identifying more essential proteins. CONCLUSIONS: The described experiments show that this method is more effective than other similar methods in identifying essential proteins in dynamic protein networks. This study can better explain the mechanism of life activities and provide theoretical basis for the research and development of targeted drugs.


Asunto(s)
Algoritmos , Mapeo de Interacción de Proteínas , Mapas de Interacción de Proteínas , Biología Computacional , Humanos , Proteínas/química
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