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2.
Genes (Basel) ; 14(3)2023 03 03.
Artículo en Inglés | MEDLINE | ID: mdl-36980915

RESUMEN

Genetic analysis of historical museum collections presents an opportunity to clarify the evolutionary history of understudied primate groups, improve taxonomic inferences, and inform conservation efforts. Among the most understudied primate groups, slow and pygmy lorises (genera Nycticebus and Xanthonycticebus) are nocturnal strepsirrhines found in South and Southeast Asia. Previous molecular studies have supported five species, but studies using morphological data suggest the existence of at least nine species. We sequenced four mitochondrial loci, CO1, cytb, d-loop, and ND4, for a total of 3324 aligned characters per sample from 41 historical museum specimens for the most comprehensive geographic coverage to date for these genera. We then combined these sequences with a larger dataset composed of samples collected in Vietnam as well as previously published sequences (total sample size N = 62). We inferred phylogenetic relationships using Bayesian inference and maximum likelihood methods based on data from each locus and on concatenated sequences. We also inferred divergence dates for the most recent common ancestors of major lineages using a BEAST analysis. Consistent with previous studies, we found support for Xanthonycticebus pygmaeus as a basal taxon to the others in the group. We also confirmed the separation between lineages of X. pygmaeus from northern Vietnam/Laos/China and southern Vietnam/Cambodia and included a taxonomic revision recognizing a second taxon of pygmy loris, X. intermedius. Our results found support for multiple reciprocally monophyletic taxa within Borneo and possibly Java. The study will help inform conservation management of these trade-targeted animals as part of a genetic reference database for determining the taxonomic unit and provenance of slow and pygmy lorises confiscated from illegal wildlife trade activities.


Asunto(s)
Lorisidae , Animales , Filogenia , Lorisidae/anatomía & histología , Lorisidae/genética , Teorema de Bayes , Asia Sudoriental , Variación Genética/genética
3.
Folia Primatol (Basel) ; 82(3): 154-64, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-22116576

RESUMEN

We observed 18 groups of golden-cheeked gibbons (Nomascus gabriellae) in the secondary lowland forest in Cat Tien National Park from January 2004 to December 2005 to obtain information about the social organization of this little-studied species, in an area where the population is recovering through increased protection and forest regeneration. DNA from faecal samples of 10 infants and juveniles identified 1 case of extrapair paternity. DNA from faecal samples of 18 adults from three communities revealed the majority of adults sampled of both sexes to be related to adults in neighbouring territories. Overall, the indications are that in this empty habitat, gibbons appear to be able to establish territories adjacent to those of their kin.


Asunto(s)
Hylobatidae/fisiología , Preferencia en el Apareamiento Animal , Animales , ADN/análisis , Heces/química , Femenino , Hylobatidae/genética , Masculino , Repeticiones de Microsatélite , Densidad de Población , Dinámica Poblacional , Vietnam
4.
Am J Primatol ; 72(12): 1047-54, 2010 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-20623503

RESUMEN

Crested gibbons, genus Nomascus, are endemic to the Indochinese bioregion and occur only in Vietnam, Laos, Cambodia, and southern China. However, knowledge about the number of species to be recognized and their exact geographical distributions is still limited. To further elucidate the evolutionary history of crested gibbon species and to settle their distribution ranges, we analyzed the complete mitochondrial cytochrome b gene from 79 crested gibbon individuals from known locations. Based on our findings, crested gibbons should be classified into seven species. Within N. concolor, we recognize two subspecies, N. concolor concolor and N. concolor lu. Phylogenetic reconstructions indicate that the northernmost species, N. hainanus, N. nasutus, and N. concolor branched off first, suggesting that the genus originated in the north and successively migrated to the south. The most recent splits within Nomascus occurred between N. leucogenys and N. siki, and between Nomascus sp. and N. gabriellae. Based on our data, the currently postulated distributions of the latter four species have to be revised. Our study shows that molecular methods are a useful tool to elucidate phylogenetic relationships among crested gibbons and to determine species boundaries.


Asunto(s)
Demografía , Hylobates/clasificación , Hylobates/genética , Filogenia , Animales , Asia Sudoriental , Secuencia de Bases , Teorema de Bayes , Análisis por Conglomerados , Citocromos b/genética , Haplotipos/genética , Funciones de Verosimilitud , Modelos Genéticos , Datos de Secuencia Molecular , Análisis de Secuencia de ADN , Especificidad de la Especie
6.
Primates ; 61(3): 373-387, 2020 May.
Artículo en Inglés | MEDLINE | ID: mdl-31965380

RESUMEN

Over the past 20 years, GPS collars have emerged as powerful tools for the study of nonhuman primate (hereafter, "primate") movement ecology. As the size and cost of GPS collars have decreased and performance has improved, it is timely to review the use and success of GPS collar deployments on primates to date. Here we compile data on deployments and performance of GPS collars by brand and examine how these relate to characteristics of the primate species and field contexts in which they were deployed. The compiled results of 179 GPS collar deployments across 17 species by 16 research teams show these technologies can provide advantages, particularly in adding to the quality, quantity, and temporal span of data collection. However, aspects of this technology still require substantial improvement in order to make deployment on many primate species pragmatic economically. In particular, current limitations regarding battery lifespan relative to collar weight, the efficacy of remote drop-off mechanisms, and the ability to remotely retrieve data need to be addressed before the technology is likely to be widely adopted. Moreover, despite the increasing utility of GPS collars in the field, they remain substantially more expensive than VHF collars and tracking via handheld GPS units, and cost considerations of GPS collars may limit sample sizes and thereby the strength of inferences. Still, the overall high quality and quantity of data obtained, combined with the reduced need for on-the-ground tracking by field personnel, may help defray the high equipment cost. We argue that primatologists armed with the information in this review have much to gain from the recent, substantial improvements in GPS collar technology.


Asunto(s)
Ecología , Sistemas de Información Geográfica/estadística & datos numéricos , Movimiento , Primates , Animales , Ecología/métodos
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