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1.
J Chem Phys ; 160(23)2024 Jun 21.
Artículo en Inglés | MEDLINE | ID: mdl-38904943

RESUMEN

We investigated the spectrum of density fluctuations of a liquid crystal, CB7CB, in two different orientations by using high-resolution inelastic x-ray scattering. Our analysis, based on Bayesian principles, revealed that high-frequency collective excitations propagate through this mesoscale-ordered sample in a peculiar manner that lies somewhere between those observed in liquids and crystalline systems. Interestingly, when we probed longer length scales, a more pronounced solid-like response emerged. This was mainly characterized by anomalously sharp inelastic excitations and the onset of shear mode propagation. Comparison with previous x-ray diffraction results suggests a correlation between the observed behavior and the mesogen arrangement.

2.
J Environ Manage ; 358: 120811, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38608572

RESUMEN

Soil sodicity is a growing concern for crop growth and development in arid and semi-arid regions of the world. Conservation agriculture (CA) provides an effective solution towards reclamation of degraded sodic lands and enhance the crop productivity. A field experiment was carried out to assess the sodic soil reclamation potential of CA based management practices including zero tillage, legume (mungbean; Mb) rotation, residue (+R) mulch, and subsurface drip irrigation (SDI) for three years under rice-wheat (RW) system. The system scenarios (Sc) comprised of multiple indicators to measure their impact on soil properties as well as system productivity, profitability, water and nitrogen use efficiency. The results indicated that soil pHs under Sc5-Sc8 (CA-based SDI scenarios) was significantly (p < 0.05) lowered by 2.16, 2.16 and 1.33% compare with mean of Sc1 and Sc2 (CT-based system; 9.10, 8.29 and 8.14) at all three soil layers (0-5, 5-15 and 15-30 cm), respectively. Similarly, the exchangeable sodium percentage (ESP) was lowered by 2.9, 11.2 and 14.9% under CA-based scenarios with residue management compared with CT-based system (mean of Sc1 and Sc2; 15.2, 17.2 and 28.6%) during the study. The concentration of extractable anions (COЗ2‾, HCOЗ‾, Cl‾) decreased notably whereas, soil organic carbon and soil solution cations (Na+, Ca2+, Mg2+) concentration were increased under CA based management SDI plots. In addition, CA with SDI scenarios (mean of Sc5-Sc8) proved to be more productive and water-efficient than CA-based flood irrigation (FI; mean of Sc3 and Sc4). Moreover, CA-based FI and SDI scenarios saved 29.5 and 60.7% irrigation water, and improved the partial factor productivity of nitrogen (PFPN) by 6.8 and 24.4%, respectively compared to CT-R (conventional tillage without residue) based Sc1. Therefore, CA practices can potentially reduce sodicity and improve soil chemical properties for profitable crop cultivation.


Asunto(s)
Agricultura , Suelo , Suelo/química , Agricultura/métodos , Conservación de los Recursos Naturales , Riego Agrícola , Productos Agrícolas , Nitrógeno
3.
Inorg Chem ; 61(44): 17804-17818, 2022 Nov 07.
Artículo en Inglés | MEDLINE | ID: mdl-36282620

RESUMEN

Metallodithiolene complexes of the type [(R2C2S2)M(η2-tpbz)] [R = CN, Ph, or p-anisyl; M = Ni2+, Pd2+, or Pt2+; tpbz = 1,2,4,5-tetrakis(diphenylphosphino)benzene] chelate transition metals ions to form trimetallic arrays [[(R2C2S2)M(tpbz)]2M']n+, where M' is square planar Pt2+, tetrahedral Cu+, Ag+, or Au+, or octahedral {ReBr(CO)}/{Re(CO)2}+. Forcing conditions (190 °C reflux in decalin, 72 h) are demanded for the Re+ compounds. With third-row metals at the nexus, the compounds are stable to air. Twelve members of the set have been characterized by X-ray diffraction and reveal dithiolene centroid-centroid distances ranging from 22.4 to 24.0 Å. Folding around each tpbz intrachelate P···P axis such that the MP2/M'P2 planes meet the tpbz P2C6P2 mean plane at non-zero values gives rise to core topologies that appear "S-like" or herringbone-like for M' = Pt2+ or {ReBr(CO)}/{Re(CO)2}+. Calculations reveal that departure from idealized D2h/D2d/C2v symmetries is induced by steric crowding between Ph groups and that dynamic, fluxional behavior is pertinent to the solution phase because multiple, lower-symmetry minima of comparable energy exist. Spectroscopically, the formation of the trimetallic arrays is marked by a shift of the open end 31P nuclear magnetic resonance signal from approximately -14.5 ppm to approximately +41, approximately +20.5, and approximately +28.5 ppm for M' = Pt2+, Au+, and {ReBr(CO)}/{Re(CO)2}+, respectively. Electrochemically, dithiolene-based oxidations are observed for the R = Ph and M' = Pt2+ or Au+ compounds but at potentials that are anodically shifted relative to charge-neutral [[(R2C2S2)M]2(µ-tpbz)]. The compounds reported clarify the possibilities for the synthesis of assemblies in which weakly coupled spins may be created in their modular (R2C2S2)M and M' parts.

4.
Inorg Chem ; 60(17): 13177-13192, 2021 Sep 06.
Artículo en Inglés | MEDLINE | ID: mdl-34370468

RESUMEN

Open-ended, singly metalated dithiolene complexes with 1,2,4,5-tetrakis(diphenylphosphino)benzene (tpbz) are prepared either by ligand transfer to [Cl2M(tpbz)] from (R2C2S2)SnR'2 (R = CN, R' = Me; R = Me, R' = nBu) or by a direct reaction between tpbz and [M(S2C2R2)2] (M = Ni, Pd, Pt; R = Ph, p-anisyl) in a 1:1 ratio. The formation of dimetallic [(R2C2S2)M(tpbz)M(S2C2R2)] attends these syntheses in modest amounts, but the open-ended compounds are readily separated by silica chromatography. As affirmed by X-ray crystallographic characterization of numerous members of the set, the [(R2C2S2)M(tpbz)] compounds show dithiolene ligands in their fully reduced ene-1,2-dithiolate form conjoined with divalent Group 10 ions. Minor amounts of octahedral [(Ph2C2S2)2PtIV(tpbz)], a presumed intermediate, are isolated from the preparation of [(Ph2C2S2)PtII(tpbz)]. Heterodimetallic [(Ph2C2S2)Pt(tpbz)Ni(S2C2Me2)] is prepared from [(Ph2C2S2)PtII(tpbz)]; its cyclic voltammogram, upon anodic scanning, shows two pairs of closely spaced, but resolved, 1e- oxidations corresponding first to [R2C2S22-] - 1e- → [R2C2S•S-] and then to [R2C2S•S-] - 1e- → [R2(C═S)2]. The open diphosphine of [(R2C2S2)M(tpbz)] can be oxidized to afford open-ended [(R2C2S2)M(tpbzE2)] (E = O, S). Synthesis of the octahedral [(dppbO2)3Ni][I3]2 [dppbO2 = 1,2-bis(diphenylphosphoryl)benzene] suggests that the steric profile of [(R2C2S2)M(tpbzE2)] is moderated enough that three could be accommodated as ligands around a metal ion.

5.
Genes Dev ; 27(22): 2439-44, 2013 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-24240234

RESUMEN

V(D)J joining is mediated by RAG recombinase during early B-lymphocyte development in the bone marrow (BM). Activation-induced deaminase initiates isotype switching in mature B cells of secondary lymphoid structures. Previous studies questioned the strict ontological partitioning of these processes. We show that pro-B cells undergo robust switching to a subset of immunoglobulin H (IgH) isotypes. Chromatin studies reveal that in pro-B cells, the spatial organization of the Igh locus may restrict switching to this subset of isotypes. We demonstrate that in the BM, V(D)J joining and switching are interchangeably inducible, providing an explanation for the hyper-IgE phenotype of Omenn syndrome.


Asunto(s)
Linfocitos B/citología , Diferenciación Celular , Isotipos de Inmunoglobulinas/metabolismo , Exones VDJ/fisiología , Animales , Linfocitos B/metabolismo , Línea Celular , Células Cultivadas , Regulación del Desarrollo de la Expresión Génica , Isotipos de Inmunoglobulinas/genética , Ratones , Células Precursoras de Linfocitos B/citología , Células Precursoras de Linfocitos B/metabolismo
6.
J Environ Manage ; 296: 113243, 2021 Oct 15.
Artículo en Inglés | MEDLINE | ID: mdl-34271352

RESUMEN

Farm level recommendation in salt-affected agricultural landscapes is practically difficult due to spatial variations in inherent soil salinity, diverse farming situations and associated land ownerships with small-scale production systems. This study presents spatial array analysis of 354 geo-referenced soil samples revealing widespread heterogeneity in soil sodicity and fertility status across salt-affected Ghaghar basin of Kaithal district in Haryana, India. Six principal components accounted for 73% of the total variability, and the most important contributors [electrical conductivity (ECe), sodium adsorption ratio (SAR), DTPA extractable copper (Cu) and boron (B), soil organic carbon (OC) and available phosphorus (AP)] as minimum data set were used to develop the soil quality index (SQI). Geostatistical analysis revealed Circular (ECe and AP), Exponential (SAR, OC and B) and Gaussian (Cu) as the best fit semivariogram ordinary kriging model with weak to moderate spatial dependence. Three soil management zones (SMZs) were delineated by grouping the entire area based on soil quality index (SQI). Fertilizer recommendations for rice-wheat cropping system in different SMZs were calculated using soil test crop response (STCR) equation to ensure balanced fertilization, resource saving and reducing environmental footprints. Gypsum requirement map was prepared for systematic allocation and distribution, and enabling farmers to precisely use the mineral gypsum in order to reclaim and reduce stresses led by sodic lands. The implications of this study showed zone-specific advocacy for gypsum application (as soil ameliorant) and balanced fertilization in sustainable restoration of sodic lands, improving nutrient use efficiency and stabilizing crop production in salt-affected regions of India and similar ecologies elsewhere.


Asunto(s)
Carbono , Suelo , Agricultura , Fertilizantes/análisis , India , Cloruro de Sodio
7.
Langmuir ; 36(30): 8826-8838, 2020 08 04.
Artículo en Inglés | MEDLINE | ID: mdl-32628853

RESUMEN

The evaporation of antigen-laden sessile droplets on antibody-immobilized PDMS substrates could be used in place of microwells for detection purposes owing to the lesser requirements of analytes and a reduced reaction time. To develop such techniques, the effects of different parameters on the reaction efficiency and on the resulting deposition patterns of antigens on the surface after evaporation need to be well understood. While the resultant deposition patterns from the evaporation of droplets of biological fluids on surfaces are being studied for various biomedical applications, systems where the analyte of interest in the droplet binds to the surface have not been investigated until now. While the effect of temperature on the internal convection within sessile droplets has been studied, the effect of the analyte (antigen in this work) concentration and the analyte-surface (antigen-antibody in this work) binding on the internal convection has not been studied until now. Therefore, to gain insight, the evaporation dynamics of sessile droplets with different concentrations of antigens along with polystyrene microspheres (used as tracers) in phosphate-buffered saline (PBS) on antibody-immobilized PDMS substrates were experimentally studied using microparticle image velocimetry (PIV). It was found that Marangoni flow due to concentration gradients and surface reactions was responsible for the observed velocity field. The antibody-antigen reaction (as compared to the control case of no surface reaction) and higher concentrations of prostate specific antigen (PSA) resulted in increased strength of Marangoni convection. To obtain further insight into the different deposition patterns obtained, the contributions of different particle-particle and particle-substrate forces were determined, and it was observed that the Marangoni forces along with surface tension and DLVO forces create a uniform deposition of the particles present within the droplet. This learning could be used to design biosensors.


Asunto(s)
Convección , Reología , Tensión Superficial , Temperatura
8.
Molecules ; 25(10)2020 May 23.
Artículo en Inglés | MEDLINE | ID: mdl-32456122

RESUMEN

A series of bis(4-alkoxyphenyl) viologen bis(triflimide) salts with alkoxy chains of different lengths were synthesized by the metathesis reaction of respective bis(4-alkoxyphenyl) viologen dichloride salts, which were in turn prepared from the reaction of Zincke salt with the corresponding 4-n-alkoxyanilines, with lithium triflimide in methanol. Their chemical structures were characterized by 1H and 13C nuclear magnetic resonance spectra and elemental analysis. Their thermotropic liquid-crystalline (LC) properties were examined by differential scanning calorimetry, polarizing optical microscopy, and variable temperature X-ray diffraction. Salts with short length alkoxy chains had crystal-to-liquid transitions. Salts of intermediate length alkoxy chains showed both crystal-to-smectic A (SmA) transitions, Tms, and SmA-to-isotropic transitions, Tis. Those with longer length of alkoxy chains had relatively low Tms at which they formed the SmA phases that persisted up to the decomposition at high temperatures. As expected, all of them had excellent thermal stabilities in the temperature range of 330-370 °C. Their light-emitting properties in methanol were also included.


Asunto(s)
Ciclohexanonas/química , Cristales Líquidos/química , Sales (Química)/química , Viológenos/química , Rastreo Diferencial de Calorimetría , Luz , Espectroscopía de Resonancia Magnética , Difracción de Rayos X
9.
Environ Manage ; 66(5): 826-844, 2020 11.
Artículo en Inglés | MEDLINE | ID: mdl-32789595

RESUMEN

Micro-scale perspectives are seldom included in planned climate change adaptations, yet farmers' perceptions can provide useful insights into livelihood impacts from interactions between climatic and other stressors. This research aims to understand how climate variability and other stressors are impacting the livelihoods of smallholder farmers in Azamgarh district, eastern Uttar Pradesh, India. Data from 84 smallholder farmers were collected using mixed qualitative and quantitative approaches, including interview and participatory methods, informed by multiple stressor and sustainable livelihood frameworks. Results revealed that farmers are increasingly facing problems caused by the reduced duration and number of rainy days, and erratic rainfall. Anomalies in seasonal cycles (longer summers, shorter winters) seem to have altered the local climate. Farmers reported that repeated drought impacts, even in years of moderate rainfall, are adversely affecting the rice crop, challenging the formal definition of drought. Climate variability, identified as the foremost stressor, often acts as a risk multiplier for ecological (e.g., soil sodicity), socio-economic (e.g., rising costs of cultivation) and political (e.g., mismatching policies and poor extension systems) stressors. In addition to climate stresses, resource-poor marginal groups in particular experienced higher risks resulting from changes in resource management regimes. This study provides an important cue to revisit the formal definitions of normal rainfall and drought, accommodating farmers' perceptions that evenly distributed rainfall, and not total rainfall is a key determinant of crop yields. Though India has developed adaptive measures for climate change and variability, integration of farmers' perceptions of climate and other stressors into such policies can improve the resilience of smallholder farmers, who have hitherto depended largely on autonomous adaptation strategies.


Asunto(s)
Agricultura , Agricultores , Cambio Climático , Sequías , Humanos , India
10.
Nano Lett ; 17(6): 3870-3876, 2017 06 14.
Artículo en Inglés | MEDLINE | ID: mdl-28548861

RESUMEN

The investigation of phononic collective excitations in soft matter systems at the molecular scale has always been challenging due to limitations of experimental techniques in resolving low-energy modes. Recent advances in inelastic X-ray scattering (IXS) enabled the study of such systems with unprecedented spectral contrast at meV excitation energies. In particular, it has become possible to shed light on the low-energy collective motions in materials whose morphology and phase behavior can easily be manipulated, such as mesogenic systems. The understanding of collective mode behavior with a Q-dependence is the key to implement heat management based on the control of a sample structure. The latter has great potential for a large number of energy-inspired innovations. As a first step toward this goal, we carried out high contrast IXS measurements on a liquid crystal sample, D7AOB, which exhibits solid-like dynamic features, such as the coexistence of longitudinal and transverse phononic modes. For the first time, we found that these terahertz phononic excitations persist in the crystal, smectic A, and isotropic phases. Furthermore, the intermediate smectic A phase is shown to support a van der Waals-mediated nonhydrodynamic mode with an optical-like phononic behavior. The tunability of the collective excitations at nanometer-terahertz scales via selection of the sample mesogenic phase represents a new opportunity to manipulate optomechanical properties of soft metamaterials.

11.
J Immunol ; 194(5): 2380-9, 2015 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-25624452

RESUMEN

Engagement of promoters with distal elements in long-range looping interactions has been implicated in regulation of Ig class switch recombination (CSR). The principles determining the spatial and regulatory relationships among Igh transcriptional elements remain poorly defined. We examined the chromosome conformation of C region (CH) loci that are targeted for CSR in a cytokine-dependent fashion in mature B lymphocytes. Germline transcription (GLT) of the γ1 and ε CH loci is controlled by two transcription factors, IL-4-inducible STAT6 and LPS-activated NF-κB. We showed that although STAT6 deficiency triggered loss of GLT, deletion of NF-κB p50 abolished both GLT and γ1 locus:enhancer looping. Thus, chromatin looping between CH loci and Igh enhancers is independent of GLT production and STAT6, whereas the establishment and maintenance of these chromatin contacts requires NF-κB p50. Comparative analysis of the endogenous γ1 locus and a knock-in heterologous promoter in mice identified the promoter per se as the interactive looping element and showed that transcription elongation is dispensable for promoter/enhancer interactions. Interposition of the LPS-responsive heterologous promoter between the LPS-inducible γ3 and γ2b loci altered GLT expression and essentially abolished direct IgG2b switching while maintaining a sequential µâ†’γ3→γ2b format. Our study provides evidence that promoter/enhancer looping interactions can introduce negative constraints on distal promoters and affect their ability to engage in germline transcription and determine CSR targeting.


Asunto(s)
Linfocitos B/inmunología , Cromatina/química , Cambio de Clase de Inmunoglobulina/genética , Inmunoglobulinas/química , Recombinación V(D)J/genética , Animales , Linfocitos B/citología , Linfocitos B/efectos de los fármacos , Cromatina/inmunología , Cromosomas de los Mamíferos , Regulación de la Expresión Génica/inmunología , Sitios Genéticos , Inmunoglobulinas/genética , Inmunoglobulinas/inmunología , Interleucina-4/genética , Interleucina-4/inmunología , Lipopolisacáridos/farmacología , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , FN-kappa B/deficiencia , FN-kappa B/genética , FN-kappa B/inmunología , Regiones Promotoras Genéticas , Factor de Transcripción STAT6/deficiencia , Factor de Transcripción STAT6/genética , Factor de Transcripción STAT6/inmunología , Transducción de Señal , Bazo/citología , Bazo/efectos de los fármacos , Bazo/inmunología , Elongación de la Transcripción Genética
12.
J Am Chem Soc ; 138(16): 5283-9, 2016 04 27.
Artículo en Inglés | MEDLINE | ID: mdl-27015140

RESUMEN

The liquid crystal nonsymmetric dimer, 1-(4-butoxyazobenzene-4'-yloxy)-6-(4-cyanobiphenyl-4'-yl) hexane (CB6OABOBu), shows enantiotropic twist-bend nematic, NTB, and nematic, N, phases. The NTB phase has been confirmed using polarized light microscopy, freeze fracture transmission electron microscopy, and X-ray diffraction. The helicoidal pitch in the NTB phase is 18 nm. The NTB-N (TNTBN) and N-I (TNI) transition temperatures are reduced upon UV light irradiation, with the reduction in TNTBN being much larger than that in TNI. An isothermal, reversible NTB-N transition may be driven photochemically. These observations are attributed to a trans-cis photoisomerization of the azobenzene fragment on UV irradiation, with the cis isomers stabilizing the standard nematic phase and the trans isomers stabilizing the NTB phase. The dramatic changes in TNTBN provide evidence that the transition between the normal nematic and twist-bend nematic with spontaneous breaking of chiral symmetry is crucially dependent on the shape of molecular dimers, which changes greatly during the trans-cis isomerization.

13.
Rep Prog Phys ; 79(5): 056502, 2016 05.
Artículo en Inglés | MEDLINE | ID: mdl-27088655

RESUMEN

Investigations of the mixtures of semiconducting quantum scale particles in anisotropic liquid crystal (LC) medium have become a vibrant area of research primarily due to their very interesting phenomenology. The results of these investigations fall into four groups: (i) Photoluminescent emissive properties of the quantum particles ordinarily depend on the size, shape, and chemical nature of the particles. These undergo important changes in their spectrum, polarization, and isotropy of emission when dissolved in an anisotropic LC phase. Moreover, their response to external stimuli such as mechanical, optical, or electric fields is altered in important ways; (ii) physical properties of LCs such as viscosity, dielectric relaxation, etc are modified by the addition of quantum particles. Their presence in ferroelectric smectic LC is known to give rise to an antiferro- to ferri-electric phase transition and suppresses the paraelectric phase; (iii) switching characteristics of LC devices are altered in important ways by the addition of quantum particles. Their threshold voltage is usually lowered, contrast ratio, and switching speed of nematic, ferroelectric, and cholesteric devices may increase or decrease depending on the concentration, applied field, and particle anisotropy; and (iv) controlled aggregation of quantum particles at the interface between isotropic and LC domains, near added polystyrene beads, and in the vicinity of point defects gives rise to interesting photonic structures, enables studies of photon antibunching and single photon sources. Clearly, there is a need to understand the basic and applied aspects of these systems and find routes to their technological applications including sensors, electrooptical devices, and solar energy harvesting. This review provides an overview of recent work involving liquid crystals and a variety of quantum particles.

14.
Phys Chem Chem Phys ; 17(1): 191-9, 2015 Jan 07.
Artículo en Inglés | MEDLINE | ID: mdl-25380214

RESUMEN

The relationship between strain-dependent macroscopic elastic behavior and the changes in microscopic structure of the smectic-C liquid crystal elastomer (LCE), C11MeHQSi8 were investigated using synchrotron X-ray studies. At very low strains ε ≤ 0.2, the smectic layers are randomly oriented. As the strain increases beyond 0.2, the smectic layers reorient and become parallel to the direction of the applied strain. The polydomain to monodomain (P-M) transition accompanied by the formation of chevron structure ensues for ε > 0.2 and is nearly complete for ε = 0.7. The chevron structure relaxes after the applied strain changes, with a time constant τα ∼ 45 min while the orientation order parameters of the mesogenic and elastomeric components gradually increase and saturate at 0.83 and 0.4, respectively at ε = 1.7 which is near the end of the plateau region. Relaxation rates τα for the tilt angle and τd corresponding to the smectic layer spacing both become about 10 times faster when the strain exceeds 0.7. The LCE remains "locked" into the monodomain state and retains 90% and 80% values of α and S, respectively for 24 hours after the applied strain is removed. The viscoelastic properties of the liquid crystal appear to dominate the equilibration process at low strains while the elastomeric properties control the system's response at high strains.

15.
Bull Environ Contam Toxicol ; 92(2): 165-8, 2014 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-24240634

RESUMEN

A simple, rapid and economical method was developed and validated for the determination of metamitron using UV detector with RP-HPLC. Study of metamitron in soil was carried out. The compound was extracted from soil by methanol and clean-up was done on C-18 SPE column. Recovery ranged from 90.75 % to 94.05 % within 0.1-2.0 µg g(-1) and RSD 1.80 %. Retention time was 3.8 min and limit of detection and limit of quantification were 0.001 and 0.008 µg g(-1). The results indicated that the reported method could meet the requirement for the analysis of metamitron in trace amounts.


Asunto(s)
Monitoreo del Ambiente/métodos , Herbicidas/análisis , Contaminantes del Suelo/análisis , Suelo/química , Triazinas/análisis , Cromatografía Líquida de Alta Presión
16.
Appl Opt ; 52(22): E1-5, 2013 Aug 01.
Artículo en Inglés | MEDLINE | ID: mdl-23913081

RESUMEN

A nematic liquid crystal (LC) mixture was doped with harvested ferroelectric BaTiO3 nanoparticles and investigated with wide- and small-angle x-ray scattering upon heating from the nematic to the isotropic phase. At moderate temperatures, colloidal crystallites were observed. LC test cells with homeotropic anchoring were placed in the x-ray beam and the realignment of the LC director was investigated upon applying an electric field.

17.
Tuberculosis (Edinb) ; 142: 102398, 2023 09.
Artículo en Inglés | MEDLINE | ID: mdl-37657276

RESUMEN

Mycobacterium tuberculosis (Mtb) continues to define new paradigms of host-pathogen interaction. There are several host proteins known which are regulated by Mtb infection. The proteins which regulate host biological processes like apoptosis, cell processes, stress proteins, metabolic enzymes, etc. are targeted by the pathogens. Mtb proteins interact directly or indirectly with host proteins and play an important role in their persistence and intracellular growth. Mtb is an intracellular pathogen. It remains dormant for years within the host without activating its immune system. Mtb Protein tyrosine kinase (PtkA) regulates host anti-apoptotic protein, metabolic enzymes, and several other proteins that are involved in stress regulation, cell proliferation, protein folding, DNA repair, etc. PtkA regulates other mycobacterial proteins and plays an important role in its growth and survival. Here we summarized the current knowledge of PtkA and reviewed its role in mycobacterial intracellular survival as it regulates several other mycobacterial proteins and host proteins. PtkA regulates PtpA secretion which is essential for mycobacterial virulence and could be used as an attractive drug target.


Asunto(s)
Mycobacterium tuberculosis , Proteínas Tirosina Quinasas , Proliferación Celular , Apoptosis , Interacciones Huésped-Patógeno
18.
Sci Total Environ ; 875: 162573, 2023 Jun 01.
Artículo en Inglés | MEDLINE | ID: mdl-36871711

RESUMEN

Driven by the UN-SDGs of achieving food security and agricultural sustainability, it remains more challenging in degraded ecosystems to simultaneously improve the crop performance without creating unintended favour for excessive fertilization and associated environmental consequences. We assessed the N-use pattern of 105 wheat-growers in sodicity affected Ghaghar Basin of Haryana, India, and then experimented upon to optimize and identify indicators of efficient N use in contrasting wheat cultivars for sustainable production. The survey results revealed that majority of farmers (88%) have increased their reliance on N nutrition (∼18 % extra N), and even extended their duration of N scheduling (12-15 days) for better plant adaptation and yield insurance in sodicity stressed wheat; albeit to a greater extent in moderately sodic soils applying 192 kg N ha-1 in 62 days. The participatory trials validated the farmers' perception of using more than the recommended N in sodic lands. This could realize the transformative improvements in plant physiological [higher photosynthetic rate (Pn; 5 %) and transpiration rate (E; 9 %)] and yield [more tillers (ET; 3 %), grains spike-1 (GS; 6 %) and healthier grains (TGW; 3 %)] traits culminating in ∼20 % higher yield at 200 kg N ha-1 (N200). However, further incremental N application had no apparent yield advantage or monetary benefits. At N200, every additional kilogram of N captured by the crop beyond the recommended N improved grain yields by 36.1 kg ha-1 in KRL 210 and 33.7 kg ha-1 in HD 2967. Further, the varietal differences for N requirements, with 173 kg ha-1 in KRL 210 and 188 kg ha-1 in HD 2967, warrants the need of applying balanced fertilizer dose and advocate revision of existing N recommendations to cope up the sodicity induced agricultural vulnerability. Principal Component Analysis (PCA) and correlation matrix showed N uptake efficiency (NUpE) and total N uptake (TNUP) as the highly weighted variables illustrating strong positive association with grain yield, and potentially deciding the fate of proper N utilization in sodicity stressed wheat. Key insights suggested that combining participatory research with farmers' knowledge and local perspective could be decisive in better integration of technologies, and serving to adapt the real-time soil sodicity stress and sustaining wheat yields with economized farm profits.


Asunto(s)
Ecosistema , Triticum , Granjas , Agricultura/métodos , Suelo , Cloruro de Sodio , Grano Comestible
19.
Methods Mol Biol ; 2681: 213-229, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37405650

RESUMEN

Classical yeast surface display (YSD) antibody immune libraries are generated by a separate amplification of heavy- and light-chain antibody variable regions (VH and VL, respectively) and subsequent random recombination during the molecular cloning procedure. However, each B cell receptor comprises a unique VH-VL combination, which has been selected and affinity matured in vivo for optimal stability and antigen binding. Thus, the native variable chain pairing is important for the functioning and biophysical properties of the respective antibody. Herein, we present a method for the amplification of cognate VH-VL sequences, compatible with both next-generation sequencing (NGS) and YSD library cloning. We employ a single B cell encapsulation in water-in-oil droplets, followed by a one-pot reverse transcription overlap extension PCR (RT-OE-PCR), resulting in a paired VH-VL repertoire from more than a million B cells in a single day.


Asunto(s)
Anticuerpos , Transcripción Reversa , Reacción en Cadena de la Polimerasa , Biblioteca de Genes , Clonación Molecular
20.
Sci Total Environ ; 885: 163959, 2023 Aug 10.
Artículo en Inglés | MEDLINE | ID: mdl-37146830

RESUMEN

Subsurface drainage (SSD) has been proved to be an effective technology to reclaim waterlogged saline soils. Three SSD projects were implemented in Haryana, India in 2009, 2012 and 2016 to study the long term effect of SSD (10, 7 and 3 years) operation on restoring productivity and carbon sequestration potential of degraded waterlogged saline soils under prevalent rice-wheat cropping system. These studies indicated that successful operation of SSD improved soil quality parameters such as bulk density, BD (from 1.58 to 1.52 Mg m-3), saturated hydraulic conductivity, SHC (from 3.19 to 5.07 cm day-1); electrical conductivity, ECe (from 9.72 to 2.18 dS m-1), soil organic carbon, OC (from 0.22 to 0.34 %), dehydrogenase activity, DHA (from 15.44 to 31.65 µg g-1 24 h-1), and alkaline phosphatase, ALPA (from 16.66 to 40.11 µg P-NP g-1 h-1) in upper soil surface (0-30 cm). The improved soil quality resulted in increased rice-wheat system yield (rice equivalent yield) by 328 %, 465 % and 665 % at Kahni, Siwana Mal and Jagsi sites, respectively. Studies also revealed that carbon sequestration potential of degraded land increased with the implementation of SSD projects. The principal component analysis (PCA) showed that % OC, ECe, ALPA, available N and K content were the most contributing factor for soil quality index (SQI). The overall result of the studies showed that SSD technology holds great potential to improve soil quality, increase crop productivity, farmers' income and ensure land degradation neutrality and food security in waterlogged saline areas of western Indo Gangetic Plain of India. Hence, it can be concluded that large scale adoption of SSD may fulfill the promise "No poverty, Zero hunger, and Life on land" sustainable development goals of United Nation in degraded waterlogged saline areas.

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